LOCUS LI511196 1172 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c30929.graph_c1_seq2.
ACCESSION LI511196
VERSION LI511196.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 1172)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1172
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c30929.graph_c1_seq2"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 380 a 247 c 274 g 271 t
ORIGIN
1 gagaattaaa ctgccatcgt ctgttgtgtg cacatttggt cttcctattt ttttggatcg
61 taaaattacg tacaataggc atgcggcgcg atatcttgat agaatacctt tacagtagag
121 tgctgacgga tcgattagtg atgctgtgaa tagtttcgat aaatagaatt ttggacattg
181 gttgacgaaa aacaaggtac aagatggacg cgtacgacaa gaaatttgca gaaatgcaaa
241 agtacattcc atttttggaa gcgatgattg agaggctgca aaacgttaag gacaagaatc
301 gggaaaatca attgcagaaa atgcaaggtc tgcacggggt tctgtcaaat agcaagcgaa
361 agctgaagat ggatacgttg cagcgatgcg agtatgtttt gcagaagctg cacaatagag
421 tagaaaaggg aaatacgcct ggtttgcaat tgccaactaa acaaaatgat ggcaccacgc
481 cgcaaccttc gacttcgtcc gagggtacga aatcagatca atacaagaaa gcgggagaac
541 taccgcaaga cgcggaaaag gatatagaaa tcgaagaaac gccggcgagt ccggatacag
601 ttagatcctc cagtcctgat tgccaaattc tgcccgtaat aattcctacg gagcgcaaca
661 cttacttatc caagaacaaa agcagcaaca gacgacgaca acttcgtaaa ataccggtta
721 taactcttac ggatcgtacg agagaaataa ccatctcatc gccgacagat tctaattcag
781 aggatgtttc tttcaccgag tgggatttgc tggaagaatc ggagaggcat actattacaa
841 agagcagaag cgattggcag ccttcgctag tcgtttctgg tcacgatgta gcaaccgcgg
901 cgaaattgat cagtaacaat ctaccgcaaa aagtcaacga cggcagaaac tatacagaaa
961 cttatgacgt accgaccgtt ccggtgcctt ctcttggtgg ctctaggcga ttaacgtcag
1021 tcttagagaa gaacaagctg catttagact tgataaccga caattcttct aggccggaat
1081 cacccgtcaa cgttccggaa gtgagactca agtctcctga tcccgagata ttatttgcga
1141 aatctacgtc acccagacca aaagatagcc ac
//