LOCUS LC781537 6630 bp mRNA linear INV 09-FEB-2024 DEFINITION Amorphochlora amoebiformis ppap28 mRNA for pyrenoid-localized protein, complete cds. ACCESSION LC781537 VERSION LC781537.1 KEYWORDS . SOURCE Amorphochlora amoebiformis ORGANISM Amorphochlora amoebiformis Eukaryota; Sar; Rhizaria; Cercozoa; Chlorarachniophyceae; Amorphochlora. REFERENCE 1 (bases 1 to 6630) AUTHORS Hirakawa,Y. TITLE Direct Submission JOURNAL Submitted (03-OCT-2023) to the DDBJ/EMBL/GenBank databases. Contact:Yoshihisa Hirakawa University of Tsukuba, Faculty of Life and Environmental Sciences; 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8572, Japan URL :https://www.tsukuba.ac.jp/ REFERENCE 2 AUTHORS Moromizato,R., Fukuda,K., Suzuki,S., Motomura,T., Nagasato,C. and Hirakawa,Y. TITLE Pyrenoid proteomics reveals independent evolution of the CO2-concentrating organelle in chlorarachniophytes JOURNAL Proc. Natl. Acad. Sci. U.S.A. (2024) In press COMMENT FEATURES Location/Qualifiers source 1..6630 /collection_date="1989-10-01" /db_xref="taxon:1561963" /geo_loc_name="Japan:Okinawa" /mol_type="mRNA" /organism="Amorphochlora amoebiformis" /strain="CCMP2058" CDS 1..6630 /codon_start=1 /gene="ppap28" /note="intrinsically disordered Rubisco-binding protein, detected by proteomic analysis" /product="pyrenoid-localized protein" /protein_id="BET23149.1" /transl_table=1 /translation="MAPTHPRPAQRLLLGRVYFLFALVGVAAVCFRFYGPSDPRNLRV GVVPRSGPFVASRIPPPRLSVRAFDKDGIMRRMDALEGEIRRLSEMENEMQTLEKLGG LSKMQALEQECRELEQERLRLMKFEEETHRLGHVNNQLEEEIRKIESLGGVPRLELLE NEVARMEKEKTALKLEMEDEIRRLQQENEDLRALEEHVRKVESMGGIKRFEAVQEDLR HLKQENKELRFIAAEFEKVEAAGGLRRLEEIEKGVRLMEQENEELRFVAEQVLSLGGL PRVQQMGDDMTKLKKENRKYKEGESELRKVENMGGIIRFEKLLEEARSFADNKQQLKS LEAENKELKIKIAELTQLLEKLQGKSPNDALKAETAKKLETATKSSKEPKKSTTKEPD EKKEQEKQPKDSPKTLPISEMKRERDLMTEQNNQPNLIQKAIPIMSGKKSDPVPFEHN RHPHTQTMELSDASETSAPEKSTSPQPEETKPTSSSDHDSVKADSTKPKPAQKPEEIK GDEKKATNVIFNSESKPEAKAKADSGEAKADSGGENKEKAAEDKEFEELKSKLEGPES KTKVEDNKVDELNTKLEDPKKAGDEKPEEPKAKSEEDPKADKSEVNMPKKEFEVPKGE SEVNKSEPEVLKSEPEVLKSEPEVLKSESELPESESKVSKDKSEVPKSSFEVPKSKFA GPDDKFDVPKSKFEALKSKSEAPKSDFVGVSKGESDAPKSEPEVPKSESEVPESESKV PKSNFEVPKSKFGGPDSKFDVPKSKFGAFKSKSEVPKSDSEAPESELEVPKSESEEPK SVSEVPKSNFEVPKSKFGGPDSKFDVPKSKFGTFKSKSETPKSEPEAPKSEPEAPKSE PEAPKSETEAPKSEPEAPKSESEVPKSNFEVPKSKFGGPDSKFDVPKSKFGAFKSKSE EPKSESEVPRSEPEEPKSAPEEPKSEPEEPKSESEVPKSNFEVPKSKIGEPDSKSDVP KSKFAAFKSKFGVFKSKSEAPKSEPEVPKSEPEELKSEPEEPKSESEVPKSNFEVPKS KFGGPDSKFDVPKSKFGAFKSKSEEPKSESEVPGSEPEEPKNAPEEPKSEPEEPKSKI GEPDSKFDVPKSKFAAFKSKFGVFKSKPEAPKSEPEVPKSEPEEPKNEPEEPKSESEV PKSNFEVPKSKFGGPDSKFDVPKSKFAAFKSKSEVPKSESEVSKNKPEVPKSEPEVPK SEPEVPKSEPEVPKSESEASKSNFEVPKSKFGGPDSKFDVPKSKFGEFKSKTEVPKSE SKVPKSEPEVPKSESEVPKSKPEVPKSESEVPKSESEVPKSESEVKSGSEVPKSTFEV PKSTFEVPKSKFGGPDSKFDVPRSKFGAFKSKSEAPKSESDVPKSEPEVPKSASDELK SEPEVPKSNFEVPKSKFGGPDSKFDVPKSKFGVFKSKSETPKSESEVPKSEPEVTKST EESKSKPEMPKSESEVPKSNFEVPKSKFGGPDSKFDVPKSKFGAFKSKSETPKSEPDV PKSEPEVSKSEPEVPKSEPEVPKSEIEVPKSETEMPKSESKGESEVPKSNFEVPKSKF GGPDGKFDVPKSKFGAFKSKSEAPKSEPEVPKSEPEEPKSEPVVPEVLEVPKSESEAP KKFDKKAIDVPKSMFEKFRQRESELQNPTTAPDQSKKTPEEAKVPEEAKVPEAKPEEA KLEKDQEVEGKKVDEIEGKFEEGKKVDEIEGKFEEGKKVDEIEGKFEEGKKADEGKKV DEIEGKFEEGKKIDEIEGKFEEVKKVDEIEGKFEEGKKVDEGKKVDEIEGKFEEGKKI DEIEGKFEEVKKVDEIEGKFEEGKKADEIEGKFEEVKKVDEIEGKFEEGKKVDEIEGK FEGVKDKQPSIPEPQQTPEPKEAPEPTESSEPTESSEPTESSEPKKDHEPKPVAEVSA SSTEKSDAFEFSPEDLADAIASAASAAGFSSDEKLKMEPHEIESDNGHVHDDVVSETL SHETERERIVRKIFALYLMRFARKKHKEGDISEMKEGLSDEEREVAWGHLKAEKEKLE QELARKQAVAQRSKELIREQKNRERLLRNIPKKQYSKPSESLGSPTETSFGTVQTSSS VGLAKAPEKEIPRHEIPKQGYWGDVYMPQLKWEQDEETLDVNVFLYGRGFSEKQQLEV DFEEGRFAILAARTNYEYFSINIGGKVDPERCWWEWYEAQPHEIKIHLLKAPDEQVLW DQPLVYPRAQEESKPLKAV" BASE COUNT 2047 a 1424 c 2047 g 1112 t ORIGIN 1 atggccccta cgcatccacg cccagcccaa cggctgctct tgggccgtgt gtacttcttg 61 ttcgcgcttg tcggcgtggc tgcggtctgt tttaggtttt atggaccctc agatcctcgg 121 aacctgcgtg ttggggttgt ccctcgcagc gggccattcg tcgcttcccg gattcctccg 181 cctcggctat ccgtccgcgc tttcgacaaa gacggaatca tgcgtcgaat ggacgctcta 241 gagggggaga tcaggcgttt aagtgaaatg gagaacgaga tgcagacgct ggagaagctg 301 gggggcctct cgaagatgca agcgctcgaa caggagtgcc gcgagctcga acaagagagg 361 ctccggctta tgaagttcga ggaggaaact cacagacttg ggcacgtcaa taaccagctc 421 gaggaggaga tccgcaagat cgagtccctc ggcggcgtcc cgcgccttga gcttctcgaa 481 aacgaggtgg cgcgcatgga gaaagagaag actgctctca agctcgagat ggaggatgag 541 atccgaaggc tccagcaaga aaacgaagat ctgagggctc tagaagaaca cgttcgaaag 601 gtagagtcga tgggaggaat caagaggttc gaggctgtcc aggaggattt gagacacctt 661 aagcaggaga ataaagagct tcgctttatc gcagcggaat tcgagaaggt cgaggcagcg 721 ggggggctgc gaaggctgga ggagatcgag aagggggtga ggcttatgga gcaagagaac 781 gaagagttaa ggtttgtcgc ggagcaagtg ctttcgctcg gagggttgcc gagggttcag 841 cagatggggg acgatatgac gaagctgaag aaggagaaca gaaagtacaa agaaggggag 901 agcgagttac gcaaagtgga aaatatggga ggaattatca gattcgaaaa gctgctagaa 961 gaagctagaa gctttgcaga caacaaacag caattgaaat ccctggaggc cgagaataag 1021 gagcttaaga taaagatagc agagctgacc caactcttgg aaaagctgca aggcaagtca 1081 ccaaacgatg cactgaaagc ggaaaccgcg aaaaaattgg aaaccgcgac aaaatcatca 1141 aaagagccga aaaaatcaac tactaaagag ccggacgaga aaaaagagca agaaaagcag 1201 cccaaggata gtcctaagac tcttccaatc tcggaaatga agcgagaacg tgatctgatg 1261 acggaacaga acaaccagcc caacttaatt caaaaggcaa tacctattat gtcgggcaaa 1321 aagtctgacc ccgtcccctt cgaacataat cgtcatccgc acacgcagac aatggagttg 1381 agtgacgctt ccgaaacctc agcccctgag aagtcgacct ccccccaacc tgaggaaacc 1441 aaaccaacat cttcttcgga tcacgattct gtcaaggccg actcaaccaa gcccaagcct 1501 gcgcagaagc ccgaggagat aaaaggagat gagaaaaaag ctacgaatgt gattttcaac 1561 tcggagagta agcctgaggc caaggccaag gccgacagtg gggaagctaa ggccgacagt 1621 ggtggggaaa acaaggagaa ggcggcagaa gacaaggagt ttgaagagct taagagcaag 1681 cttgaggggc ctgagagcaa gaccaaggtc gaggataata aggtcgacga gctcaacacc 1741 aagcttgagg accccaagaa ggccggggat gaaaagcctg aggagcccaa ggccaagtcg 1801 gaggaagatc caaaggccga taagagcgag gtcaatatgc ctaagaaaga gttcgaggtg 1861 cctaagggtg aatccgaggt gaataagagc gagcccgaag tgcttaagag cgagcccgaa 1921 gtgcttaaga gcgagcccga agtgcttaag agcgagtctg agttgcctga gagcgaatcc 1981 aaagtgtcta aggacaagtc cgaagtgcct aagagcagct ttgaggtacc gaagagcaag 2041 tttgcaggtc cggacgacaa attcgatgtg cccaagagca aatttgaagc gctaaagagc 2101 aagtctgaag cacctaagag cgacttcgtc ggagtttcta agggtgaatc cgacgcacct 2161 aagagcgagc ccgaagtgcc taagagcgag tccgaggtgc ctgaaagcga gtccaaggtg 2221 cctaaaagta acttcgaggt gcctaagagc aagttcggag ggcccgatag taagtttgat 2281 gtacccaaaa gcaagtttgg ggcatttaag agcaagtctg aggtacctaa gagcgactcc 2341 gaggcacctg agagtgaact agaggtgcct aagagcgaaa gtgaggagcc caagagcgtg 2401 tccgaggtgc ctaagagcaa ctttgaggtg cctaagagca agtttggtgg acccgacagc 2461 aagttcgatg tgcctaagag taagtttggg acatttaaga gcaaatctga gacgccaaag 2521 agcgaacccg aggcccccaa gagcgaaccc gaggccccca agagcgaacc cgaggcaccc 2581 aagagcgaaa ccgaggcacc caagagcgaa cccgaggcgc ccaagagcga atctgaggtg 2641 cccaagagta acttcgaggt gcctaagagc aagttcggtg gacccgacag caagtttgat 2701 gtgcccaaga gcaagtttgg ggcattcaag agcaagtctg aggaacctaa gagtgagtcc 2761 gaggtgccta ggagcgagcc tgaggagcct aagagcgcgc ctgaggagcc taagagcgag 2821 cctgaggagc ctaagagcga gtccgaggta cctaagagta actttgaggt tcctaaaagc 2881 aagatcggtg aacccgacag caagtccgat gtgcccaaga gcaagtttgc agcgttcaaa 2941 agcaagtttg gggtgttcaa aagtaagtct gaggctccta agagtgagcc cgaggtgcct 3001 aagagcgaac ctgaggagct caagagcgaa cctgaggagc ccaagagcga atctgaggtg 3061 cccaagagta acttcgaggt gcctaagagc aagttcggtg gacccgacag caagtttgat 3121 gtgcccaaga gcaagtttgg ggcattcaag agcaagtctg aggaacctaa gagtgagtcc 3181 gaggtgcctg ggagcgagcc tgaggagcct aagaacgcgc ctgaggagcc taagagcgag 3241 cctgaggagc ctaagagcaa gatcggtgaa cccgacagca agttcgatgt gcccaagagc 3301 aagtttgcag cgttcaaaag caagtttggg gtgttcaaaa gtaagcctga ggctcccaag 3361 agtgagcccg aggtgcctaa gagcgaacct gaggagccca agaacgaacc tgaggagccc 3421 aagagcgaat ctgaggtgcc caagagtaac ttcgaggtgc ctaagagcaa gttcggtgga 3481 cccgacagca agttcgatgt gcccaagagc aagtttgccg cattcaagag caagtccgag 3541 gtacctaaga gtgagtccga ggtgtccaag aacaaacctg aggtgcccaa gagcgaacct 3601 gaggtgccca agagcgaacc tgaggtgccc aagagcgaac ctgaggtgcc caagagcgag 3661 tctgaggcgt ctaagagtaa cttcgaggtg cctaagagca agttcggtgg acccgacagc 3721 aagttcgatg tgcccaagag caagtttggg gaattcaaga gcaagaccga ggtacctaag 3781 agtgagtcca aggtgcccaa gagcgaacct gaggtgccca agagcgaatc tgaggtgccc 3841 aagagcaaac ctgaggtgcc caagagcgaa tccgaggtgc ccaagagcga atccgaggtg 3901 cccaagagcg aatccgaggt caagagcgga tctgaggtgc ctaagagtac cttcgaggtg 3961 cctaagagta ccttcgaggt gcctaagagt aagttcggtg gacccgacag caagttcgat 4021 gtgcccagga gcaagtttgg ggcatttaag agcaagtccg aggcacctaa gagtgagtct 4081 gatgtgccca agagcgaacc cgaggttccc aagagcgcat ccgacgagct caagagcgag 4141 cccgaggtgc ctaagagtaa cttcgaggtc cctaagagca agttcggtgg gcccgacagc 4201 aagttcgacg tacccaagag caaatttggg gtgttcaaaa gcaagtctga gacccctaag 4261 agtgagtccg aggtgcccaa gagcgaaccc gaagtgacca agagcaccga ggagtccaag 4321 agcaaacctg agatgcctaa gagtgaatct gaggtgccta agagtaactt cgaggtgcct 4381 aagagtaagt tcggtggacc cgacagcaag ttcgatgttc ccaaaagcaa gtttggggca 4441 tttaagagca agtccgagac acctaaaagt gagcctgatg tgcccaagag cgaacccgag 4501 gtgtccaaga gcgaacccga ggtgcccaag agcgaacccg aggtgcccaa gagcgaaatt 4561 gaggtgccca agagcgaaac tgagatgcct aagagcgaat ccaagggcga gtccgaggta 4621 cctaagagta acttcgaggt ccctaagagc aagttcggtg gaccagacgg taagttcgat 4681 gtgcccaaaa gcaagtttgg ggcattcaag agcaagtctg aggcccctaa aagtgagccc 4741 gaggtgccta agagcgaacc tgaggagccc aagagtgagc ccgtggtacc cgaggtactt 4801 gaggtaccta agagcgagtc cgaagcgcct aagaaatttg acaaaaaggc gatcgacgtc 4861 ccgaagagca tgtttgagaa atttagacag cgggagtcgg agcttcagaa ccccaccacg 4921 gcccccgatc agagtaaaaa gactcctgag gaggccaagg ttcctgagga agccaaggtt 4981 cctgaggcca agccggagga ggcgaaattg gagaaagacc aagaagttga aggaaagaag 5041 gttgatgaga ttgagggaaa gttcgaggaa ggaaagaagg ttgatgagat tgagggaaag 5101 ttcgaggaag gaaagaaggt tgatgagatt gagggaaagt tcgaggaagg aaagaaggct 5161 gatgaaggaa agaaggttga tgagattgag ggaaagttcg aggaaggaaa gaaaattgat 5221 gagattgagg gaaagttcga ggaggtaaag aaggttgatg agattgaggg aaagttcgag 5281 gaaggaaaga aggttgatga aggaaagaag gttgatgaga ttgagggaaa gttcgaggaa 5341 ggaaagaaaa ttgatgagat tgagggaaag ttcgaggaag taaagaaggt tgatgagatt 5401 gagggaaagt tcgaggaagg aaagaaggct gatgagattg agggaaagtt cgaggaagta 5461 aagaaggttg atgagatcga gggaaagttc gaggaaggaa agaaggttga tgagattgag 5521 ggaaagttcg agggagtgaa ggacaaacag ccaagcatcc cagagcctca acaaaccccg 5581 gaacccaaag aagccccgga acccacggaa tcctcggaac ccacggaatc ctcggaaccc 5641 acggaatcct cggaacccaa gaaggatcac gagccgaagc ctgttgcgga ggtttcggca 5701 tcttctacag agaaatcgga tgccttcgaa ttctcccccg aggatttagc tgatgccata 5761 gcctccgctg caagtgccgc tggtttcagt tctgatgaga agctgaagat ggaaccccat 5821 gaaatcgagt ctgataacgg tcacgtgcac gatgacgtgg tctccgaaac cctctcccat 5881 gagaccgaga gggagcgaat tgtgcggaag atattcgcgt tatatctcat gcgctttgcg 5941 cgtaagaagc ataaagaggg ggacatttct gagatgaaag agggcttgtc ggatgaagag 6001 agagaggtag cctggggaca tcttaaggcc gaaaaggaga aacttgaaca agagttggct 6061 cgcaagcagg ccgtagctca gcggtctaag gaactaattc gagagcagaa gaatagagaa 6121 aggcttctcc gaaacatacc gaaaaagcaa tattctaagc cctcggagtc tctgggctcg 6181 cccacagaaa cgtcattcgg aacagttcag acaagttcca gcgttggttt agcaaaagcg 6241 cccgaaaaag agataccccg acatgaaatt ccaaaacaag gctactgggg tgatgtatac 6301 atgcctcagc tcaaatggga acaagacgaa gaaacgttag atgtaaacgt attcttgtac 6361 gggcgaggct ttagtgagaa acagcaattg gaagtggatt ttgaagaggg ccggtttgcg 6421 attttggcag cgagaactaa ttacgagtac tttagtatca atataggcgg caaagtcgac 6481 ccagagcgtt gttggtggga gtggtatgag gctcagccac atgaaatcaa gatacacctg 6541 ttaaaggctc cagacgagca agttctatgg gaccagcctc tggtataccc acgtgctcag 6601 gaagaaagca aacctttgaa agccgtataa //