LOCUS LAZR01018679 2555 bp DNA linear ENV 01-MAY-2015 DEFINITION Marine sediment metagenome LCGC14_contig018691, whole genome shotgun sequence. ACCESSION LAZR01018679 LAZR01000000 VERSION LAZR01018679.1 DBLINK BioProject: PRJNA259156 BioSample: SAMN03002196 KEYWORDS WGS. SOURCE marine sediment metagenome ORGANISM marine sediment metagenome unclassified sequences; metagenomes; ecological metagenomes. REFERENCE 1 (bases 1 to 2555) AUTHORS Spang,A., Saw,J.H., Jorgensen,S.L., Zaremba-Niedzwiedzka,K., Martijn,J., Lind,A.E., van Eijk,R., Schleper,C., Guy,L. and Ettema,T.J. TITLE Complex archaea that bridge the gap between prokaryotes and eukaryotes JOURNAL Nature 521 (7551), 173-179 (2015) PUBMED 25945739 REFERENCE 2 (bases 1 to 2555) AUTHORS Spang,A., Saw,J.H., Jorgensen,S., Zaremba-Niedzwiedzka,K., Martijn,J., Lind,A.E., van Eijk,R., Schleper,C., Guy,L. and Ettema,T.J. TITLE Direct Submission JOURNAL Submitted (31-MAR-2015) Department of Cell and Molecular Biology, Uppsala University, Box 596, Uppsala SE-75123, Sweden COMMENT ##Genome-Assembly-Data-START## Assembly Date :: OCT-2014 Assembly Method :: Spades v. 3.0.0 Genome Coverage :: Not Applicable Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..2555 /organism="marine sediment metagenome" /mol_type="genomic DNA" /isolation_source="Loki non-amplified sample from Loki's castle hydrothermal vent sediment" /db_xref="taxon:412755" /environmental_sample /geo_loc_name="Arctic Ocean: Gakkel Ridge" /lat_lon="73.763167 N 8.464000 E" /altitude="-3283 m." /collection_date="2010" /note="metagenomic" gene 29..424 /locus_tag="LCGC14_1854660" CDS 29..424 /locus_tag="LCGC14_1854660" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKL95428.1" /db_xref="GI:816596016" /translation="MKKNLDTILRIVLYLAGVILLNVAANSLVFRIDLTQNKIYTLSD ASKNAVATLQEPLTIKVFFSQNMPAPYNNIEQQVRDLLEEYAHWGNEFFNYSFYSMGT EEGADPELLRAHSKITSHFSGSNGVIPIW" gene complement(383..1318) /locus_tag="LCGC14_1854670" CDS complement(383..1318) /locus_tag="LCGC14_1854670" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKL95429.1" /db_xref="GI:816596017" /translation="MKYETAGDPISGLKWTRKTTEKIADELESIGIKVSSNTAGKLLK KMGFSLRVNRKKIALGSKKKSQDQENRNRQFMYISELRESFAQKGYPSISVDTKKKEL IGNFKNPGSAYGREPRAVNDHDFASYSEGKGIPYGVYDTQANQGTVFIGTTFDTAAFA VESIEKWWRKEGQRRYPHCNSILILADGGGSNGSRSRSWKLGIQEKLSDRHGLEVTVA HYPPGTSKWNPIEHRLFAEISKNWAGIPLVNYETMLKYIRSTKTKTGLKIKAHLVRKK YKKGNKVPDEQMSQIQIDKHDTLPDWNYTITPRKM" gene complement(1339..2103) /locus_tag="LCGC14_1854680" CDS complement(1339..2103) /locus_tag="LCGC14_1854680" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKL95430.1" /db_xref="GI:816596018" /translation="MKPVIFTTKILKSFLQDHKIATMLELKNALGTDVDMTVFRKLRE LSYRTSYTHRGKYYTMDEIAGFDNQGLWFNRSVGFSVYGTLVNTAKSFVEKSESGLSA AELKDILNVEVKESLLRLFRKEQLHREKISGLYVYFSPETFTRKKQVLLRRDREAEPG FSLENLGSDLLAHELKAAIIIFFSTLDEKQRRLYAGMESLKLGYGGDSKIAELLTIDS HTVAKGRQELLNQDFEVERVRKKGGGRTSVKKKRRK" gene complement(2361..>2555) /locus_tag="LCGC14_1854690" CDS complement(2361..>2555) /locus_tag="LCGC14_1854690" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKL95431.1" /db_xref="GI:816596019" /translation="VKNDLLFMLVDKFTEIDLNPNVVSNHEMGYIFEELLRRFSEMSN ETAGEHYTPREVIRLGSTQK" BASE COUNT 664 a 592 c 487 g 812 t ORIGIN 1 cgttattggg aaaaaaaggt agagttcgat gaaaaagaac ctggacacca tcctgcgcat 61 cgttctttac ctggccgggg tcattctgtt gaatgtggcg gccaatagtc tcgtttttcg 121 aatcgatctt acccagaaca agatctatac cctctctgat gccagtaaaa acgcagtggc 181 caccctgcag gagccgctga ccattaaagt tttcttttcg cagaacatgc cggcccccta 241 caacaatatc gagcagcagg tgcgggatct gctcgaagag tatgctcact ggggaaatga 301 gttcttcaac tacagcttct actctatggg tacagaggag ggggcggatc cggagctgct 361 tagggctcac tcaaaaataa cttcacattt ttctgggagt aatggtgtaa ttccaatctg 421 gtaaagtatc atgtttgtcg atttgaattt gcgacatttg ttcgtcaggg actttgtttc 481 cctttttata tttctttcgt acaagatgcg cttttatttt cagacctgtt ttcgttttcg 541 tggaacgaat atattttagc atagtctcat agtttactaa tggtataccg gcccagttct 601 tgctgatctc ggcaaacagc cgatgttcaa taggattcca cttggaagtg ccgggagggt 661 aatgtgccac tgtaacttcc aaaccatggc gatcactgag tttttcctgg atgcccaatt 721 tccaagaacg agatcgagaa ccattgcttc ctccaccgtc tgccagaatc aaaatactgt 781 tgcaatgcgg atagcgtcgc tgcccttcct tgcgccacca tttttcgatt gattctactg 841 caaacgcagc tgtgtcgaac gttgtgccta tgaaaactgt tccctggttt gcctgagtgt 901 catatactcc gtagggaata cctttacctt cggaatagct tgcaaagtca tgatcattta 961 ccgctcgcgg ctctctgccg tacgcggagc cgggattctt gaagttgcca atcaattcct 1021 ttttctttgt gtctacactt atgctgggat agcctttctg ggcaaaactt tctcggagct 1081 cactaatata catgaactgc cgatttcggt tctcctgatc ctgtgatttc tttttgcttc 1141 cgagcgcgat tttcttgcga ttgaccctta gagagaaacc catctttttc agcagttttc 1201 cggctgtgtt ggaactcact ttgataccaa tcgattcaag ctcatcagca atcttctccg 1261 ttgtctttct cgtccatttc agcccactaa tagggtctcc tgctgtctca tatttcatta 1321 actcctctat tctagctatc acttccggcg ttttttttta acagatgttc tgcccccacc 1381 tttcttgcgc acacgctcta cttcaaaatc ttgatttaaa agctcctgcc ggccctttgc 1441 taccgtatga gagtcaattg ttaaaagttc tgctatctta ctgtccccac cgtatcccag 1501 cttcagcgat tccatgcctg catacagccg tcgctgcttc tcgtcaagcg tgctgaagaa 1561 tatgatgatc gctgctttta gttcatgtgc caaaaggtca ctgcccagat tctctaagct 1621 gaaacccggc tctgcttccc gatcccttcg aagtagaacc tgcttcttgc gagtaaacgt 1681 ttcaggcgaa aagtaaacat agagaccact tatcttctct cgatgaagct gctcctttct 1741 aaagagccgc aaaagagatt ccttcacttc tacattcaat atgtctttca attcggctgc 1801 agagagtccg ctctctgatt tctctacaaa gcttttcgct gtattaacca aagtgccata 1861 aacagaaaat cccactgacc tgttaaacca caaaccttga ttatcaaaac cggcaatttc 1921 atccatggtg taatacttac cgcgatgagt gtaactcgtt cgatatgaga gttctcgcag 1981 ttttctgaat accgtcatat cgacatcagt tcccaaggca ttttttaatt ctaacattgt 2041 tgcgatcttg tgatcttgca gaaatgactt aagtattttc gttgtgaaaa tgacaggttt 2101 cataatgtta tatatcctcc tataattaat tatcggacga tttataacat tatacaagta 2161 aaaatcactg aaaaattgta ttttttctaa aaatgggctt tattttcgta taaaaagtaa 2221 gaaaaacatc tctgtcctgt tctatacaat cttctttgaa cgaaaaaatg cgatgaaaga 2281 gtgaaaattt caactaaact gagtgtaaag cactaaaatt gctaaagaaa tgtgtaagag 2341 gtgctcttta gtttgttaag ttatttttgc gtggacccta agcgaatcac ttcacgcgga 2401 gtataatgtt cacctgctgt ttcattagac atttctgaaa atcttcgaag aagttcttca 2461 aaaatgtatc ccatttcatg gttcgaaact acattgggat tcagatcaat ttcagtaaac 2521 ttatcaacca acataaataa aagatcgttt ttaac //