LOCUS LAZR01015666 2899 bp DNA linear ENV 01-MAY-2015 DEFINITION Marine sediment metagenome LCGC14_contig015676, whole genome shotgun sequence. ACCESSION LAZR01015666 LAZR01000000 VERSION LAZR01015666.1 DBLINK BioProject: PRJNA259156 BioSample: SAMN03002196 KEYWORDS WGS. SOURCE marine sediment metagenome ORGANISM marine sediment metagenome unclassified sequences; metagenomes; ecological metagenomes. REFERENCE 1 (bases 1 to 2899) AUTHORS Spang,A., Saw,J.H., Jorgensen,S.L., Zaremba-Niedzwiedzka,K., Martijn,J., Lind,A.E., van Eijk,R., Schleper,C., Guy,L. and Ettema,T.J. TITLE Complex archaea that bridge the gap between prokaryotes and eukaryotes JOURNAL Nature 521 (7551), 173-179 (2015) PUBMED 25945739 REFERENCE 2 (bases 1 to 2899) AUTHORS Spang,A., Saw,J.H., Jorgensen,S., Zaremba-Niedzwiedzka,K., Martijn,J., Lind,A.E., van Eijk,R., Schleper,C., Guy,L. and Ettema,T.J. TITLE Direct Submission JOURNAL Submitted (31-MAR-2015) Department of Cell and Molecular Biology, Uppsala University, Box 596, Uppsala SE-75123, Sweden COMMENT ##Genome-Assembly-Data-START## Assembly Date :: OCT-2014 Assembly Method :: Spades v. 3.0.0 Genome Coverage :: Not Applicable Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..2899 /organism="marine sediment metagenome" /mol_type="genomic DNA" /isolation_source="Loki non-amplified sample from Loki's castle hydrothermal vent sediment" /db_xref="taxon:412755" /environmental_sample /geo_loc_name="Arctic Ocean: Gakkel Ridge" /lat_lon="73.763167 N 8.464000 E" /altitude="-3283 m." /collection_date="2010" /note="metagenomic" gene complement(60..323) /locus_tag="LCGC14_1728970" CDS complement(60..323) /locus_tag="LCGC14_1728970" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKM07928.1" /db_xref="GI:816611528" /translation="MDLTQLFVAFAVVESAIQSVDLFKERKAIVAGILGAAILYVSDI NILTALGLAEDGVALEVVGVAVGFLLAMRGTQVLHELIKKLGV" gene complement(536..736) /locus_tag="LCGC14_1728980" CDS complement(536..736) /locus_tag="LCGC14_1728980" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKM07929.1" /db_xref="GI:816611529" /translation="MVEYTEDDKEMLKSHDDTLRGNGEIGLKAEVQVLSDYVKGVKDW VKWTARIGVGVFILQVIDMVGK" gene complement(745..2202) /locus_tag="LCGC14_1728990" CDS complement(745..2202) /locus_tag="LCGC14_1728990" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKM07930.1" /db_xref="GI:816611530" /translation="MTKYVRIKHDREYWEDCKTGKLVPNSRHQDPCFNEKFTGDYAYP APVPHFSKPAGGGNAVRLNEAWWKFTKAINTAEAWKALRRNNGGWINYASNKEWPGGT TVPDPPFTFPIVEGINSIDNTCEVLARKNNSTQIKTFILSESPPDPAIINPRTHPELF CYFRSISKEGILGDAPDGVESYFPLLAKAEAWIPDEKLEFIDELPEEPPMPIPEEPDF IDLSHHNGAAYKNNPLDWQAIRDAGIDGAIAKAWDGWFMAPGGYPERQHFDAEFLTNW TSMVELTLRGAFLYGRFDTESWRPDSLAEQVSKTIAYIPLPRKPKDILMLDIEQKATQ IAHISLADREAMLVEALQEAESKWDKKFIWLYSAQWWWNYQMPKVLNPYFLEFPMVVA YYGTDPLTEWLPNGWPIENVIAHQYTDEYNIPGYPNPTLDFDGNQFLWDWDEYFDTAN PTPPPDPEPPAENPALKLALDDMQNVINVHRPKKT" gene complement(2199..2429) /locus_tag="LCGC14_1729000" CDS complement(2199..2429) /locus_tag="LCGC14_1729000" /inference="ab initio prediction:Prodigal:2.60" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="KKM07931.1" /db_xref="GI:816611531" /translation="MKTKLEKRLIVIIMVLVMFLISAYVKVGGLHVLMPGETIRIGCI VDHLTWEDTGTEYISGYTVLTGKAECWINTTQ" gene complement(2448..>2899) /locus_tag="LCGC14_1729010" CDS complement(2448..>2899) /locus_tag="LCGC14_1729010" /inference="ab initio prediction:Prodigal:2.60" /codon_start=3 /transl_table=11 /product="hypothetical protein" /protein_id="KKM07932.1" /db_xref="GI:816611532" /translation="SAVETMIGKWTEGGNERGDVIRRDASGNIEALVSSNGTAETSVT STSTVASGTWVFVALRYDPSTALDIFIGQDGADNGVLEKVTNTTSIPAALNDSAADFA IGARDTSGTAADFMTGRAGGLVFRCNAVFTENQINMLYSQLRLLIGA" BASE COUNT 677 a 739 c 639 g 844 t ORIGIN 1 tattagaagt attgcgccgg tcaaaatgta cgggatgacc agcggcttac tgggtttatt 61 tatacgccca gcttcttgat tagttcgtgt aagacttgcg ttccgcgcat cgcaagcaag 121 aagccaacag caacgccgac aacttctaat gcaacaccat cttcagcaag acctagggcg 181 gtcaagatgt tgatgtcgga tacgtagaga atggcagctc ctagaatgcc ggcaacgatt 241 gccttgcgct ctttgaacag atcaacgctc tggattgcag attctacaac agcaaatgca 301 acaaacaatt gggtcaagtc catagtattt ctcctgtagg ggttgggggt atcgtccgaa 361 gggacaggta caatatacta ttttttgatg ggggtgtcaa atggattagg tgggttaaaa 421 ctcttgggaa gtctgtttgc ccaccgtata tctacggttt cgagcagtta gctatttctg 481 cccagacttc ccttatctca aagtttctat caggttaatg cctttattat atcacctatt 541 tacccaccat atcaatcacc tgcaagatga aaacgccaac accaatacgc gccgtccact 601 tgacccaatc tttcactccc ttaacataat cagagaggac ttgtacttcg gccttcaggc 661 caatttcgcc attaccgcgt aatgtgtcgt cgtggctctt tagcatttcc ttatcgtctt 721 cggtatattc caccatgttg actcctatgt tttcttaggc cgatgcacat tgatcacatt 781 ctgcatatcg tccagcgcaa gtttcaatgc ggggttttct gcgggcggtt ctgggtcggg 841 cggcggggtc gggttcgcgg tatcaaagta ttcgtcccaa tcccaaagga attgattgcc 901 gtcaaagtct aatgtcgggt ttggatatcc cggaatgtta tattcatctg tgtattggtg 961 cgcgatcacg ttctcgatcg gccagccatt gggcaaccat tcagtaagcg ggtctgtgcc 1021 gtaataagcg accaccatgg ggaattccag gaagtaggga ttgagaacct tgggcatctg 1081 ataattccac caccattgcg ccgaatatag ccaaatgaat ttcttgtccc attttgattc 1141 ggcttcctgc aacgcttcaa ctagcattgc ttcccggtcc gcaagagaga tgtgagcaat 1201 ctgagttgct ttctgctcaa tatccagcat cagaatatct ttgggtttgc gtggcagtgg 1261 gatatacgcg atggtttttg atacttgttc agccaaacta tctggccgcc agctttcagt 1321 atcaaaccta ccatatagga aagccccgcg caaagtcagt tcaaccatgg atgtccaatt 1381 ggttagaaac tcagcatcaa aatgttggcg ctcaggatat ccaccaggcg ccataaacca 1441 accatcccat gcctttgcaa ttgccccatc aataccagcg tccctaattg cctgccaatc 1501 tagtggatta tttttatatg ctgccccgtt gtgatgtgat aggtcaatga aatctggttc 1561 ttcgggtatt ggcatgggtg gttcctccgg taattcgtca ataaattcta gtttctcatc 1621 aggtatccag gcttcggctt tagccagtaa tgggaaataa ctttcaacac catccggtgc 1681 atcgcctaat ataccttctt tgctgatgct tctgaaatag caaaacaatt ctgggtgcgt 1741 tctcgggttt ataatcgcgg ggtcaggtgg tgattccgag agaataaaag tcttgatctg 1801 cgtactgtta tttttgcgcg ccaacacttc acaggtatta tcaatgctgt taattccttc 1861 gactattgga aatgtaaagg gcggatccgg gacagtcgtt ccaccaggcc attccttatt 1921 agaggcgtag tttatccagc cgccgttatt acgcctgagc gccttccaag cctccgctgt 1981 atttattgct ttggtgaatt tccaccaggc ttcattaagt cgtaccgcgt tcccgccccc 2041 ggccggtttg ctgaaatgcg gcaccggtgc agggtaagca taatcccctg tgaacttctc 2101 gttgaaacac gggtcttgat gccgcgagtt cgggaccagc ttcccggtct tgcagtcttc 2161 ccaatattcc cggtcgtgct tgatgcggac gtatttggtc attgtgtggt gttaatccag 2221 cattccgctt tcccggtcaa aacggtataa ccactaatat actctgtgcc tgtgtcttcc 2281 catgtcaaat ggtctacgat gcaccctatt cttatagttt cgccaggcat caacacgtgg 2341 aggccgccca ccttcacata ggcgctgatt aaaaacatca ccaacaccat gattattaca 2401 attagccttt tttctaattt ggttttcatt gtgactcctt tatgaatcta tgctcctatt 2461 aatagtctca attgtgaata tagcatattt atctgatttt cggtgaaaac cgcgttgcat 2521 cgaaacacca atccgccagc gcgaccggtc ataaaatctg ccgccgtccc gctggtatcc 2581 cttgccccaa ttgcgaaatc tgcggcgcta tcattaagcg cagcgggtat gctggttgta 2641 ttcgtgacct tttctaatac cccattatca gccccatcct gtccaataaa aatatccaat 2701 gccgtgcttg gatcatatcg aagggccaca aatacccatg tcccagatgc taccgtgctt 2761 gtactggtta cacttgtttc ggcagtgccg ttgctgctta caagggcctc tatattcccg 2821 ctggcatccc gccgtattac atcaccgcgc tcgtttcccc cctcagtcca tttccctatc 2881 atggtttcga ctgctgaag //