LOCUS LA848631 5413 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c40650_g1_i3.
ACCESSION LA848631
VERSION LA848631.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 5413)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5413
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c40650_g1_i3"
/organism="Monomorium pharaonis"
BASE COUNT 1535 a 1074 c 1339 g 1465 t
ORIGIN
1 tcgtcgtcgt cgccgtcgcc gccgctccgc cgcgacatat gattcataac gaccaagcgg
61 ggggttgtct tcaggaacag aggccaaatt ttatacattc ggagatgcta gaagtcggtt
121 tgcgagttgt tcgtggccag gattggaggt gggacgatca ggatggcggc gaaggtcacg
181 ccgggaccat cgtggagatt ggtagacctc cctccacggg taactctacc tccagtccga
241 atcctactga tcgaacgcca gacaagacgg taatcgttca gtgggatcac ggcgcaagga
301 gtaattatag aatcggatat cagggtgctt acgatctgtt ggtgttcgat aatgcggccg
361 ccggtgtcaa gcattccaat attatctgcg acggttgcaa gaggcacgga ataatcggca
421 ttaggtggaa gtgcacagtg tgctttgact atgatctctg cacgcagtgt tacatggccg
481 acgtacacga gttgactcac acttttgaga gatatcaaac tgcgaattct ataggagttt
541 gtttgggacc gagagaaggt tgcatgaaga taccgctgaa agggatcttc ataggagcaa
601 aagtcattcg cggaccggat tgggagtggg gaaatcagga tggcggacgt gggaaaaccg
661 gcagagtcat ggacatacgc ggatgggata acgagagtag tcgatctgtt gcgaccgtca
721 cgtggtcgac gggcagcact aacgtgtatc gattaggctt taaaggatgc gtggatctgt
781 gttacgtgga ggaggcgaat gccggtactt attacaagga gcatcttccg ttactcggcc
841 aaccagtttt gaccgtaccg gataacggaa acagcacgac gccgacgaag agcggtgccg
901 ccaacgtcac gtctagtcca caccctctaa cgtttaacgt tggtgataag gtgaaagtgc
961 taatggaagt cgatacgtta aaggaaatgc aggacggtca tggcggatgg aatccgcgca
1021 tggctgacta cataggaaag attggcacag tacaccggat tacggacaag ggagatattc
1081 gcgtgcagta tgaaggctgc cacaataggt ggacttttca tccgggtgct ctgacgaaag
1141 tcaccgctaa ggacgcattc tctctaggcg atgtagtccg cgtgaagagt gatttggccg
1201 ctgtcaagca atatcaacgt ggtcatggtg aatggataga tgtcatgaaa aatgctctgg
1261 ggaaaaccgg gaaggtaatt aaaatctatt ccgacggtga cttgcgcgtg gcgctagacg
1321 tacatggtca aacatggaca tttaatcctc tgagtgtcgt tccggtatct tctgtctcaa
1381 atgccacggc tattgcacat gataatgcaa acaggagtag ggatcgctcg gtcgatggta
1441 ccgatagcga agtggagaag ttgttaagag acgcggctag aggcgaagct ggagtggatg
1501 cagtacggga attcctcaaa aagtatcctg gtagggtaga cgcatgtgct cctggtggtg
1561 gcaggaaaac gtgtctgcaa gtggctgcgc atcaaggtca acgtgagctt tgcactcttc
1621 ttctagatgc cggtgcttct ctacgcgcaa tcgatgagga tggggatacg cccttacatt
1681 atgcggcatt cggcaatcag ccggaaataa tggatctact gttatcgcgg ggtgcgtcta
1741 ttaatgccgt caataatggt agatgtagcg ctttgcacgt ggcggttaac aaacaacacg
1801 tgcaatgcgt gaaagtgctg ctgcgttatc actgcgacgt caatctccag gactcatacg
1861 gtgacacggc gttacacgat gcgatcggga aggatgcgct agatgtgatt gacgcattat
1921 gctcctgtga gagagttgac tttacattga gaaataaacg aggcttcaac attctacatc
1981 acgccgctct caaaggcaat gctcatgcaa cggagaggtt ggtttcgcgc gcgcgtcatt
2041 tggtagacgt gaaaaaggag gacggatttg cagcgctgca cctggcggca ttgaacgggc
2101 acagggaagt cgcagctatt cttctctcgc agaacggcgg tcgcgccaag gtggacttac
2161 gcaacaatcg acggcaaacg ccgttgcact tggcaacttc acagggacac tggtcgctcg
2221 tcgagctgct ggtgcatcac aatgcggaca ttggtagcac ggacgaggat ggcgattctg
2281 tgttacacat cgcaatagct aagagcccga atcaacagac tgccgtgcct acacccgaaa
2341 gtagtcggga ttcaccgctt atatacaata tatggcagaa tctggcgagg caaggcgcaa
2401 agactgaatt agcattaggt tgtttcttgg taagcatgga cagaagctgc aaactccttg
2461 aacatgtcaa aaataataaa gataagacac cgctggatct tctggaaggc aatccacaag
2521 ctgctgtgct cgccgatctc ttacgatctt acaaatacca aagtcacagc acgcaattag
2581 aaatagaaaa caattcatcg accgattatg tagagccatc tacgtatcgg atagacaaca
2641 tatcgcagtc ggaaggattg cgcggaacaa agaatatagt cggttccggc gacgctgcgg
2701 agtgtcgaga ttgctcgggg atcatagcag atacaaaaca ggagaaccga attgatccaa
2761 ccagtagtgt tacgctcatt ggttgtgcac gttgcggcca taccgttgtt aaaacgcaaa
2821 cgattcaaga cggtcaactg gcgacaggcg aagtttccat agccaattcg gatgagaaat
2881 cgaaggacgt atcattggag ggcaaacgga aagaagagat cggcgacagg gagaaagaga
2941 aggataagga tcttgagcgt ctacgttatt tggagactag agtcgcggat ctcgaggagg
3001 cgaatatgtg cagcatctgc atggaacgtc gtcgtaacgt cgcctttcta tgcgggcacg
3061 gcgcatgcga gctctgcgcc gctccgctaa agacctgtca tatgtgccgc aaaacgatta
3121 caaaaaagat caatttgtat tagatgatga ttcatcattg cgcgcttacc ggtacattga
3181 tttgtatgcg tgtcgcggga ggaaagatta ataataaaat ggcccaattt atgtgtccca
3241 tttgaaacaa atggattcta tctagtttag aatgggagac acaaaaattt atttatgttg
3301 cacgttgagg cacaatggac acggtctgag tgccagaggt gggaccttgt ttgaggacca
3361 ctccccgatt cattattatt attatattgc acgttcctct cgggacatta atttacccaa
3421 tggaaaattc tgccaatcgc gtaggaaaat gttcagcaat tcgtcgtgac aacatgcgct
3481 gatgagattt aactgccaaa atgtatactc tttttcacga tcatttgtac gaaagaacga
3541 aatagagaca aagctctccg ttgtattgca ctagaatcgt gccatagtaa gacagatttg
3601 cgcgtaatac gagaatcgcg ttagctcgga cacgagatgg ttcgatctta cgttatcttt
3661 gttatttttt tcgagtagtt aaataatcgg ttagtaaaat taattattac gatggtatct
3721 tgtgtcttga cgaatatgcg cgacgtatga ttgtacacta tgtacgcttt cttcctcatg
3781 aatcggcgtt tttgcctgtg ctttatcccg tccatttttt atctatgttt aaagagagcg
3841 cggataacga gcacgaaaaa acgagcttct catctcaacg taggaaacgc gatcgtgctt
3901 atgcgacaac aatcatagaa gctcatagaa acgttcgtac atatcgccac attattgcgg
3961 aaaaggaaag aacactgttt ttacgtgttc gaaaacttaa attgtgcaaa cttctgctgc
4021 ttcatgcgca gtagaaggaa aaggggcaca tttagataat ttaatttgta accgtctcga
4081 ttttgaactt atcatgaaat ttttttaatg aatttttact gagcctcttg ttgattaatt
4141 aagatttata aactttggtc attttttaaa tattttatta accctttagc tctctctacg
4201 actgaactgt atcgtagcac acacagttcg accgcgaaat gaatcgatat gataatcttg
4261 cgatttttta tatatttggt ttttattata catgtataca cataacgaag gagaaatatt
4321 gaaataggat aatagcgctt cgttttaaat gattatttat aagaaaacta ttctagtggc
4381 gcgtagcagc tgaagggtta ataatacaac ttaggatttt actattataa cttgctattt
4441 gcaagattag gcatttaatg cgaatcaaat atcgtcgcaa agttttcgac gttctaaagt
4501 gcacaattcc ggataaaaaa agtatccgtt gatacttaat ttcaagttgt gtgaatctga
4561 tgcggcattt aaatgtatcc ccttttccca tcgcatttgc gtcattcgat gaatttctgc
4621 gtaatgaata agggaaacat ccagtcttat agccaaattt tctaggtaga ataattgtac
4681 tcgtttgtat aaagtgattc atttgtgatc gaatgcgaca gcagtggaac caattaattt
4741 taagcgcgct tcccgtcacg aacgcacctt ctaacaaaag gaaagcaacg tgtttgcatt
4801 taataaagaa gccgacaatt gcctagatac aagcttatta ttaacgtaag aggagatcga
4861 gctttttgag aatcctcaaa ttaccaggga aagaaactat gtgatttttg ggagaacttt
4921 ttttccatca gtattagacg tcttgccttt ctattcaaca caacgaaaaa gcttgtattc
4981 gaggcgccca gaaaccttta atacgagtaa gtcgtaagat gtatcccggc gaaaaatgcg
5041 taatcaatcg atttttaatc agtcggcttt aacgtaactt ctacattggt ggtttgaaga
5101 agctgaaagt gatttttatg gatcattgtg cactggggcg agagcagtcc tttcagggta
5161 acacatcgtg aattttacgt tcacaacgag aaacgtacaa tttgcgatag tgccaatctg
5221 attttgtcat gaaaaagata ttagctttct tcttttcttc tgtttttttt tctttttttt
5281 ttatattaat agctgtattg tcgtttagat atctgcgacg ttatattata aaagatgtta
5341 tattatagta aggctacagc gtaattatta agcgtcaata gatttctaca attgtaattt
5401 aagatgtaat tta
//