LOCUS LA839939 5833 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c39741_g2_i3.
ACCESSION LA839939
VERSION LA839939.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 5833)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5833
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c39741_g2_i3"
/organism="Monomorium pharaonis"
BASE COUNT 1585 a 1286 c 1198 g 1764 t
ORIGIN
1 cggagagcta atggatgtca gatgatgata ttgcaaggat gacttcgatt aaactatgat
61 taattaaata gaatcgcagc ccaaggatcc ccccccggaa tggactggac gtgggatggg
121 gaacggcaac aaacagcgac tcttcgatcg gtctcgattt tgattttatt tccctcctcg
181 cgcataatgc gcaacacgtc ccgttagcca ttgcaattgc tgtacagcag ttctcttctt
241 tttctctttt ttttttttac ttttttcgcg cttacaatac gcaccacgtg caccgcgtgc
301 accttcagac gggtcgcatt caaaactcgg gcaagactcg cgctcgccgc cgctattttt
361 atttataata cgccagtcga gccgcgtatt ttcaaaaccc gctggatttc ccctcccctt
421 ccctccccct ccaggaatcc gcgcacaaga gccgagagtc cgggtgaaca cttgcgaccg
481 aggtccgatt aacttgaccc ggcttgatgc cagtgggctg ttttattgat acagaattat
541 ggattttgcg ttgtatagag agaagagatc gaatcggggc ttagctaaaa aaaattctgc
601 ctccgcgatt gtattcggcc gccgactaaa ttaatcggcc gattaagtta atcggaactc
661 gactggagga cattcttcga gcgtcggtca ttgcgaagct gatattgact gtaaacttca
721 attctcttta ttgtagagga ttccctctgc tagtcgaatt atcgactgtt ctcgcttttc
781 cgacgagaaa tcttcgctaa tattcaatat ataaaataaa taaataaata aataacgatt
841 cttgatcact cagaaatata atgatatttt attgacgaca actgcgtggc atctcgagtg
901 ctcattcgat atcgaagacg ccaagcacac aattcttcaa acaaatctcg tcacataaaa
961 aataccgctt ctatactttc tgtacacttt atctaaaata aagaaggaag ttctttattc
1021 ctatctcgcg agagagaggg ggatgcacat gctctcgtct cgacgagata gtagcgggtg
1081 ttgaaaacga gcgtctcgtt cgatatataa tcggtacggt tattgttgag gataaaatcg
1141 cgcgcgagcc gcccgcgaat tacgcgagtt acgctttcgt tattatcgta aacaaataaa
1201 taatttattc ttctcgcacg agtgtatact cccttcggct cgcgcacgtc caagtcgccg
1261 atccgacttg cgtgagctca gccttttctt atattatacg ccttacgatt agtattattt
1321 aacatttaag agtcgttatg gaagattgaa gtgcatcgcc ttcgtctctc acgcgcctcc
1381 ctgcttaatt aatctcgctc aatcaattaa atctcacgaa agaagaacgt ccttgaagct
1441 cgggaaggat cggaggtaag gagtttgtaa aaaatctgat tttgctcctt ccttttttac
1501 gttttactta aggagtttgt cgtgattttc aggaagggac gcaacgagag gaaatgtcgt
1561 agagttcaat tcctcagcac ggagtcgctg tatatttata accgacgcga tatcatggaa
1621 gacgactgat atcacttact ggaaagtcca aaatgtcatc gacgcctgcg ggccatcgat
1681 aagagagcgc cggtcgcgat ttacggggaa gcactgtttt caagcttagg aagttcacct
1741 ctaatttttt tttctttctt ctcgaggact ctttttcgct ctcttttagg actgctatta
1801 ataacatcgc gcgataataa actctagtcc gcaaacttta ttattggcac aacatttgaa
1861 tttcggataa gattaagatt ttttcctcta cgttttctcc tcgtagattc taaaatagta
1921 taaaatactt tatttatggc tatatatacc agcttgatat atttcttaac gatatcattg
1981 gaattgcgtg aaagatttca taacaactgc aggatttttt ccgatctttt cctaatttcc
2041 ttcaaagatt ttaggaatcg gcttctcaca cgcacgtaac tgattgcgcg tgtgcgggat
2101 tcttccttca cgagacctaa aattcgtacg ctttttactc gttaacaatt tgcaaagcca
2161 aaattcagtt tatgcttata taaattcaaa tttatacaat aatttgtaga gatgcaagga
2221 caaaggaaga ttcttcagag ggaaaacacg catgcgacgc gatcacagtg tggctcttgc
2281 taaaaaatct cggtaggttc tctcttttga ttatatatcc attcgcaatt aaaaactctt
2341 tgttaagtat gtatatgttt cttaaattaa ctcgagactg atttttcaga ttaattaagc
2401 gggagataag tacgaggcgg ggttccgctt cgaaccagag ctcggagaat aatatcttcc
2461 gctagtgcac gctctacgag gtgattccct cgactttgcg gccgtgttat cccgcaagga
2521 agagtgtata cgcgtggacg cgtttgtaca cttaaaaaaa aaaacgcggc acggacacgg
2581 gccacaggat tggtatgcag cgcgtgcact agcgcgcgca cactctcaca tacacctgta
2641 ttcacctgta catgattgcg tgtaataccc acggcggacg aggttgggag gaggccccgt
2701 cgtcgtcgcc gtgtttacaa ttccaaaatg attgcgatgc gttttcacgc gtcgtcaaag
2761 aaacgcgcat ttgtatgcat agagaggatg tgtgtatttt tttttttctt taccttgtcc
2821 attagcacca aatttatgct agtcgcgtgt agatgtgtga gatttttttt tttacaggct
2881 gtcctgaatt tttatttacg agagagacct cctacatacg tatatattgc gcgattcctt
2941 tggcgcgcaa aagacaagga taatgaggat taaaatactt tcgagatatt cgaaaaaatg
3001 gacagacttt cttggaatat ttcagcgaga ttaatacacg agtataacgc gcccgtcgcg
3061 cacgtccggc cgaccagtgc gcattatatc atacttatcc gtacgtcacg tgcgcccgat
3121 cataaaagtt cacgtccaca aggaaagcct aagtgttaaa aataaatgaa agcggatagc
3181 agtcgattag aataataatt cataaagagt aatccctgaa acaactttaa caactttaaa
3241 tttaatgtaa caataaagag ggatctcgat atttattatt aaacagttaa ttcgtaagaa
3301 atttttaatt aaaaaatctc ggcatattat ggaggaatat tttgtttaga aaagtatcta
3361 ttaaagatat aaccaagttc tacgttttgg tcggtttttt ttaaggtttt ccctcggagg
3421 tgtgctcttg cgattaaacg cacgcacaga tatattcgtc tatctatcta tctatctatc
3481 tatctatcta tctatctatc tatctatcta tctatctatc tatctatcta tttatctatc
3541 tatctattgt tccgctagcg acactaataa tcgtgtcgat tctaattatc cgagtgcaat
3601 agcatgcgtg tccgcacctt ctgcgtgttt ttcacagata tattttacgc accaggtata
3661 tttgtgacat tactgggaga gcgtgtaaat tgagtaaatg taattaaact cggtacccgt
3721 atgtcgataa gatttctttc aatttttctg tataatgcga tacatgccgc gtattgtgtc
3781 acacacaaaa tataccggat gtatttcata aaaaaagggg aaacaataac gcaaatagat
3841 tttaatttta agtgaatttc tatcgatata tcctgtttct tacgtacgct aatgcgttta
3901 attagtgcaa tattaaaaat aaatatttcg ttccacacag gtgaaaatat tgcatcggtc
3961 gcatggcatt gccgccttcg gacacttttt ggcattgcgt ggacacgcag catcggcgag
4021 actgagcacg tcatcaaaaa ttagcaaaaa caatagatcg gtactgtacg gtcgcactta
4081 ttgagcaaac gatcgccgtg cgcctgggaa gatatacatt tggcactgga ttctcttttt
4141 tctctctttt acacttcttc gaagaaagct ctctttacgc attaaactct cgattacacg
4201 attttgactc gatggaaaaa agaagaaaaa ttataaacat caagaaaggg aagaatctct
4261 aaaagctaaa cgtttgtgat cgaatacata tattgttatt ccttagaatt tactttgata
4321 tcgtttgtca gttttagctc tagagtgtta aaatttattc ggaatctaac tctcttgaat
4381 catatttaat cgcgggactc gtgggattta attatgtact tctaactttg atcgtgcaaa
4441 gatttgtttc gtcctttcgt tttgattacg ttctttgata ctgtttcacc ccacttgtta
4501 aaataaaatt aactttataa gcaatcatat atctatatat agttgataac aagtaaattg
4561 ttttaaaaga aataataaga tgaaagaaac ttttcgatag atttcataat gattttttaa
4621 tttgtcttca caaatcaaag gataatcgag agttctttgc gaattcgctg atacgcgagg
4681 aaagagaagt gtttctattt acaaggattc gcaacgatca tagcgatcga gaaaaacgtc
4741 accgtcgacg ttcatccacc cacagctggt cagggaaaaa aatatacgca gccgtgcccc
4801 ttatttttac atcacccgaa cgataactcg ttcgattatc aggaacgtat cttcttcgcg
4861 aaacccgaag acattcgatc cccttttcgg ccctacctat aattttccca cgtgtttaaa
4921 gaaaccgcta tgccgttctc tacattctct cgaaaataac gttcgatatc tatatattta
4981 tagaaagaaa agaagaaggg gacgttgacg gggccgaaag agccgaacgg accactctct
5041 ctctcttcga gatcacgagg agggcttcgc ccgatgatga tatgattgcc cctcgagaaa
5101 atcgccgacg cggccggctc ggccttagct gttcatgatc gtggacctcc tggagtagcc
5161 gcgcctcgtc acaatttcac cctgcgcctc gcactctcgc ttcacccgat caattatgtc
5221 cgccaccagt ttctcctctt tctccctctg ctgctcccaa tccggacctt tgccaatgtc
5281 agtcgaggac ttgcgagtct tcttgttgct gggtggctcc tcgcggttct cgtcgttctc
5341 gttgtcggaa tgacgggagc ttaaatggcc gatgtaacct ttccgggact taaagtacgt
5401 gttgcagctg tggcacttga agagcggcgc cggttgagtc acctgggtcg acacatgcag
5461 cttgtatttg tgcctatacc aacgggttcg cgacggaagc acctcgccgc accacttgca
5521 gactacggaa ccgtcgtttt gaatgaggta ttccagcagc tgcttcctga cttccggttc
5581 gttctcgcct gcttccgatt tgggtagtag aaggtcggtt cgatcctcct ctccggtacg
5641 atccgtcaag aagtggacac cgctgactcc cctctcagtt ttgatgaagg cgctcgttcc
5701 gccggtgccc tcatcgtcac cgccgtgcgt cgccgaggac gaagccgacg aggccggcgc
5761 ggctggcgac gacggcgacg acgcattgca gatttcaaag gtgacatcgt tcggtagctg
5821 cggcggcaac tca
//