LOCUS LA839935 5119 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c39741_g1_i1.
ACCESSION LA839935
VERSION LA839935.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 5119)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5119
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c39741_g1_i1"
/organism="Monomorium pharaonis"
BASE COUNT 1249 a 1378 c 1172 g 1320 t
ORIGIN
1 taataataat aataataata atagttagtg taataattca tttttatatc catgctggtc
61 cagagctaaa agttaataat ccttaccaaa caagtgataa taaaaataat aattaataat
121 aatagctgta atataataac agtgacaata aaaataatgt tgcggttgta atagcaagtg
181 cgagaataat cgatagtaat agcaagtaac taattaataa tcaataatca atgcttctat
241 aatacatctt ccccggaaga gaaaaaaaaa caggaaggaa aaaaacctgt acactgcggc
301 cactatacag gatacttcac atattcatgc tctttcgaat ttgcctcttt ctctctccct
361 ttccttctcc tattaacacc atactaatat attctcaaat aaatatacac tttctcatct
421 ctcccttctc ctttttcttt gcgtgtattt tacttaaaat gttaattttg ctcgattcac
481 gaaataacgg tttgcttgtt cctctttatt tttcttcgtc gttatttctt ccctcttttt
541 ttctacagat aaataacttt cccacaggtt gccttcgaaa attctgtaga gaagtaggaa
601 tgcattattt ggtcaaactg aaaatcttgt tcaagatcgg acgtcacaca attttaggaa
661 attaagcttc aagagtatac tgcttgacaa ccagacatcg ttttacatat tttacattta
721 atttcgaatg agtaattata attaaaaaca aacactttat tggaatttta atagctagaa
781 aatttaatat aatattaaaa agacaaatta cggacagaaa aaataattga cacattgaaa
841 cgagaaattg tgcgcttaga aaaccgttcg tgaaacatag gaaattatta tagaatcaaa
901 atcagcattc ttcgaaaagg attcaccgcc gtttaattac taaggacttc aaatagattc
961 aaaaaatcat atttctaaat ttctcgaagc aacacgaatg tcacaagtgc tttaacagac
1021 tctaagtgtg ctctcgaaaa aaaaagaata gttctcattc ttatcgatgt ttaatattgc
1081 cttctcggaa cgcttgatcc gaggagtctc ttcaagaatt ataagggttt acgatcttgc
1141 ttcgtggtgc acgtagaaaa tgaatttatc gatgtatcct tgcaatattt tcgagaaaat
1201 tcctctttta cacacttaaa caattacata ttttgttcga atcacattat aatcgtccaa
1261 taattatgtt gttcatgcat tttagtaaaa tttaataaat aaaacgattc gcaaaacatt
1321 ctcgtcacga tacacatgca ccacgatttc tttttccacg tgtcgtatgt acacgctgac
1381 tcgatgaaca aacgaggatc gagcccgtta ttgcacagag gatataccac ataatactaa
1441 tgtacacatc aggaagcgag gagagattgc cctacgtctt cctctttttc tctccatctt
1501 tgttttcttt atcatcacat atcataatct cccctctaaa cttcctttga gctcgctctc
1561 tcgtttgttc atttcttctc tttagggaag cctgtctctt cctctcttta aggaagcctc
1621 tctcgcttcg tggaagacac agcgaagcgg atcataatcg atcatcaccg tcatcgcggg
1681 ggtgagatgg gctacgcgat tggtccgtga ccaaactatc tctcggcgtg ggatgatatc
1741 ttacgtatgc tggcaaacgc gataatcgca gcagcaacga cgggtgattt ttcaatcgag
1801 tacgcgcgga caatattaac ttctctcgac ggcatattcg acaagatttt tatttcaatc
1861 ttgccagaaa attatttatg tattgttcac caatttttga tgattctgac gtaaaaaaaa
1921 acaatctgta aagttaatta gttactgcac tgaatttttc tcgttatatt tttgaaaaca
1981 agatataaaa gctaatataa aaatttacta tgtacttgaa ttggaagcat tttttttttg
2041 caatataact ataatataat tatcttcaat tataaacatt tttaattatt aatcttataa
2101 gtttgagttt ccttcattca tgtaagtttt tttccgaata attctccgaa agattatttc
2161 ttttgattga ttccgcaatc cttgagaatc gtgactcaat tcacccgccg ttaccaaacg
2221 ccgttcagga gcgactgccg cgcctgaagg tcgtcgccct ggccgccgcg gctgtggtcc
2281 tagatgccac ggtggcaccg agcctcctcg cgtgcctctg aaccgccgcc gggccgatcg
2341 gcagcccacc tcgccctcgc cccgcccgct aaggtccacc aggcaaaaag aaactgaacg
2401 gcatgacgca gtccttgggc atgaagcaat cgtgcacggt cttcatgtgg ttcttcatct
2461 tgtcaggccg cgagaactcc ttggcgcata cagggcaagg aaagaccttg cgctgatggc
2521 cctcgtgata gaggaacgcg tgccgctgga agctgtactt gttcttaaac gtcttctgga
2581 tgtcgagctt ggcgcactcg gtacattggt agacgccctc gctgatggaa gcgtaacgga
2641 agagatttaa gccgcgtacc gacatctccg tcagctgctc ggccggatcc tgggactgcg
2701 acgtggcgcg acgccgcata cgtcgcttcg gggccgcgcg gccgctcggg gccgacatcg
2761 cgccgatgtt cgatgttgcg ttcgcgccgc cgccggagtt ccgggaagcc ggcgacgccg
2821 aggagctccg ggtcattgtg ccgccccccg cgctcgtcgt cgtcggagtg gcgcccgcgt
2881 tcgtcgtcgt cgccgcgttt gtcgtcgacg tcgacgacga cgtgctcgcc cgtgcgttcg
2941 acggcgacga ggacgacgac gagttcggag atgacgatac gtccatcgat gcggccgacg
3001 acgcacccgt gttcaatccg cgggtcttgt ccttccaggt ctcgtggccg ttatccgttt
3061 tgctcgacga gaactcttgc ttaaaaccct cactcccttg cctactgtgc ggccgcgcga
3121 atgtctcatc cgaggcttgc gccgaggtgc tgggcgtcgg ttccggttct cgtttgaccc
3181 gcgtgactgg tggctccggt gtatcggtac cgttttccgt aggctcgtct ctcctcgccg
3241 acgatgatcc cgaggaggcc gtggcggcgg gattactggc ggccgtcgca gaattgttat
3301 tgttggaaga ggcaccggcg cttctcacgt tgccgttgcc gctaacttcg ctctgaaagt
3361 ccaatcccat cttcatttcc atcatctcgg gcgagccctg gactagatcg gcaccagagc
3421 aggactgcag ctcttgaccg ccgacttcgc caatcggcgt gtccgacgaa ccgcttaact
3481 tcctgggtct gccacgtttc ctcttgggcg ccgtcagcgc cgagccaagc aacggatggc
3541 tggacatatg atggaacctc ttctgcgcga catgatgatg atgatgcgaa ccgatttggt
3601 tgatccgatg gagactgggc ggcggcggcg ccaccgcgtt ctgattgctg ttcagcagcg
3661 aggacgtgat gcttggcaaa tcacatttgt cctcgttcac ctcggtcagg ccctttatcc
3721 tcagggactc ggcgacccgc aggaaagcgg tcaatcgatc ttgatcgacg ctcacttcac
3781 cgcggtacat aaagtccagg agactgcgca tgtccacata tggaacatcc ttgagaatga
3841 ctatcgggtg cttgtcggga tgaccaacga acagggcctg aaagtagggg ctacacgccg
3901 acagcaccat cttatgcgcc ctgagtaact ggccctcaac ggccagcgtg acatcgacga
3961 acgactcgtc gtgtaacagc tggtcgaaga cggagagcaa attgctctgg tggttgttcc
4021 agcgcagaca aaatctctgc gacgccatcg cttcgcttct cagatccgcc aggttgccgt
4081 tgatgtccgc taacatgggg ggacctggct gttcgtcgcc gctttgccgc cgttaccact
4141 gccactgctg ccgccgccac ttcgtcctcg ttccttcttc tttttctgtt tctccacacc
4201 accaccacct tcctctacga cgacgaagcc gctcgctctt gctcgtgatg ctgctccttc
4261 tactactcgc cctcgcgctg ctctgctcct catcggccaa gaattatcgt gcccgtctta
4321 ctcgtgatct tggcatcctc gccgttaaac gaggacgacg acaacgacga tgagaaacgg
4381 ggtgagagac aggagcgggc gatccgtatc cgtggcgcgc gcgcgtaagg acgtgcacac
4441 gactcggccc gtgtgcagca ctaggacgcc atgtcagcaa gtcgaggcgc ggacggactc
4501 tctcggggca gatacgtacg cgcggccgag cggcgtacgt acatacacac gtatacgccg
4561 cgagcacacg cacacacgcg tcgggggccg tgcgcgaaag cgagacggaa ggcgcacgca
4621 caccacgccg ctgaccaacc cgcgcgagcc gcgccgggga atttctgctg cgccaccgaa
4681 cggccgtcac ggaacctcgc ctacgcccgc ctagccaacc agccactcca gccagccaca
4741 agccagccag ctagctagct agtcacggac gtgtcttcca ctcgcagtac ccttcaccgt
4801 cgtcgcggtg tgccgcacca caccgcgagg agacgtaggc agcagcagca gcagcggttg
4861 cgagcgcgcg acacacaccc gcccgtacga acgagcgtac gaatgtacgt tcgcttcgct
4921 tgctcgctcg ttcgctcgcg cgcgcgccct cgttcaaccg aacgaaccac cgacgtgcca
4981 ccgacgatga ccgagtcgag tcgagccgaa ccgagtctcc gactctccgc tccgaagtcg
5041 aggagtcggc cgcgcgcgct tcggagcctc ccgcaagagc gcaaacttct accaccaccg
5101 ccacctagag agacgcgac
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