LOCUS LA819491 4879 bp mRNA linear TSA 14-MAR-2015
DEFINITION TSA: Monomorium pharaonis mRNA, contig: c34783_g1_i3.
ACCESSION LA819491
VERSION LA819491.1
DBLINK BioProject:PRJDB3164
Sequence Read Archive:DRR029611, DRR029612, DRR029613, DRR029614,
DRR029615, DRR029616, DRR029617, DRR029618, DRR029619, DRR029620,
DRR029621, DRR029622, DRR029623, DRR029624, DRR029625, DRR029626,
DRR029627, DRR029628, DRR029629, DRR029630, DRR029631, DRR029632,
DRR029633, DRR029634
BioSample:SAMD00025101, SAMD00025102, SAMD00025103, SAMD00025104,
SAMD00025105, SAMD00025106, SAMD00025107, SAMD00025108,
SAMD00025109, SAMD00025110, SAMD00025111, SAMD00025112,
SAMD00025113, SAMD00025114, SAMD00025115, SAMD00025116,
SAMD00025117, SAMD00025118, SAMD00025119, SAMD00025120,
SAMD00025121, SAMD00025122, SAMD00025123, SAMD00025124
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Monomorium pharaonis (pharaoh ant)
ORGANISM Monomorium pharaonis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium.
REFERENCE 1 (bases 1 to 4879)
AUTHORS Mikheyev,A.S. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (13-MAR-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Mikheyev,A.S. and Linksvayer,T.
TITLE Genes associated with ant social behavior show distinct
transcriptional and evolutionary patterns.
JOURNAL Elife (2015)
REMARK DOI:10.7554/eLife.04775
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20140717
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4879
/db_xref="taxon:307658"
/mol_type="mRNA"
/note="contig: c34783_g1_i3"
/organism="Monomorium pharaonis"
BASE COUNT 1484 a 914 c 1000 g 1481 t
ORIGIN
1 ctaagtttat attttcattg gatatatatt gaatattgat atcaaattat aaaatattat
61 ctcaatattt catttaaaaa aatggtaatt ttaatgattc aaaatatatt taaattgaaa
121 aaattttata acaacatgca ccgcaccgca catacataca cgtgcacacg taccacatac
181 acacacacct atgaatctct gtttacggct tgcgttgcgt gtgtgcatag cgccacattt
241 ggccacattg cgctttgcta ctttggcggt catcttgtag tgtgttatga tattgtgata
301 agtgactgat ttaaatcgaa ttaaaaaaga cagatgggat ccgtgctaaa gcaagttcgg
361 atagaaatgc ctagtacgtc cgaaaatgat aatgcgacgg aaagcggtga aaaaacatta
421 gatccaaata tctatctaac ctacgacatt ctgagaattg tctttcaata tttacgtgca
481 agggacttgg cgaatgccgc gatggtttgc aggacctggt tagaagctgc aaataaagag
541 aaattgacaa gaggtcctta ttgttttatg ttagattgca aaacaaaaca tgattttgga
601 catcatctcc ttaatgtaag agttagacca tcgatagcct tgtttttttt ggctggttct
661 ttcccatatc atgtagaaga acattgtatg actttgctac ctaaaaattg tgaggttgta
721 atgttatata caacaggtat ggttatggat aataaagaac tggaaagtgg taaatgttct
781 aggactgatg cgatatgtgc atttttacca caaatcccaa atgtgagtgt aaaattgttt
841 aaactgacag aatattatgc catacagaaa acaacagaat ataaagagat aattagcata
901 attgataatc atggaacatc tgtgtcaaat aatgagatgt ctacttgctt tatgttattt
961 tgtaatggca tgggtcattc tgtagcaaaa cgttgggctt caatcataca aaaaagaaaa
1021 aataaagtaa cttctgtatg gggtggtgta ttagatttta ttcacttcat tcattcatgc
1081 cctgaaaatc tgaacaaaag gccagacatg gaacgtccaa cgcaggcccc agtttgtatc
1141 ggtgttctaa ttgctggccc tgtgcagacg tggtccatga ttttggaaag aaaatgcaat
1201 acaaaagaac gggtcgaaga aagattaaag ttatttaaaa acaaagtgaa attaaagaaa
1261 cattccatag gatttatgtt tgtatgcaga gctcgcggaa gtgaaatgta taatgaaact
1321 aacgtggaat caacaatatt caaaagatta tttcccaaag tacccttagc aggttgcttt
1381 ggtaatggtg aatttggaaa aaattccatt gatgaggcaa acaaagaaaa aaacagtgaa
1441 caggaacata aatctaagag atcttggtat aatgaattct ctactgtatt tttgatactt
1501 acatatggtt gacgttttta aagaagctac gcgtgagtgc tatgtgctac gaacattatt
1561 attattgttt aatcttcttg tgcattgata gttttaacta ttatacttgt cgtttctttt
1621 ttgttaacga gatttgaaat aattgtgtcc tgacgtttac aggacaaaaa tatacattat
1681 gataaatttc ataataatta atctgagtac tatattttta gatgtaatct gtgaaagcgc
1741 gttttgtatc ttaaaataat gttatcgaaa attgaggaaa attaagaagt aataacttat
1801 gataatatat tatacgttta tactacatac gtatatgcct ttttattttt gattccttcg
1861 cgttaattat ttttctggag cgcttgttat gataataatg cgaagtaatt cgcatcatcg
1921 tttaatgtaa tccgcattgt ttaaaacacg tatatcagtg aagttaatgc aaataatcca
1981 cgatactgtg ttggcttaca acgcttgtaa aattatcggt taattagtcg gttttaacgt
2041 tgatttagtt ggtcgtgcgc gatacgcgca cgaggtcaca cactctgttc aatacaaacc
2101 tgcacccttc tgaatataat tataatcccc cgcttgacag tacttccgcg tccgcgatac
2161 aacatgcgag ataaaacagg aaaaactagg tcaagcgaaa ggataccacc gtcttatcat
2221 gataccacca ggatttaaaa aggagtttcc accctgcgac agtgatttaa ttgctgcgtc
2281 cgtcgttcgt agttttaatg cgagttccgc acgtggcgat tgatttcttt tgttcgtaac
2341 gatattaaat attagtaaga tgtttcagaa tatagtgtca aaacaaatct ttgttcttgt
2401 tatattgtgg cattctgcgt attcgcaaca atgggaaagt ggtttgcgtc aaagatacga
2461 tggctatgga gaggattgga tattcatgcc tgacggcaac gggcaacctc aagtagcagt
2521 gttaaggatt ccagaaacga gaggcgtatt ggacaattcg gaaatagcct acatcattta
2581 cactcgatct aatccggaaa aaggtgtacg aatgactcta aataacgtta cgaatctcgc
2641 taactccggc ttcaaaccct cgcggaaaac gaaatttata actcacggat ggaaatcgag
2701 cgccatgagt accggacttt taaacatgaa agaagctttt ctcactcacg gcgactacaa
2761 tgtcatcctt gtggattggg aacccttggc cgcaagcaca ttttatttgg gaccgatgca
2821 aaacaccgta agagtcggaa atgacgctgc aaactttata gatttcttag tgaaagaaac
2881 tggactgaag acggaagacg ttcattttat tggtacatat tgcctttacc tgtaatacaa
2941 tactattact tgtaatcgca attttattgc cgttaaactt ataaggtcat tcccttgggg
3001 cacatgtggc tgggaatgcg ggcggttcga cgacttccgg gaagttgagc agagtgacag
3061 gtctggatcc agcgttgcca ggatttcaca tgctcgcctc cgaaaagact agattagatc
3121 ccacagacgc gaaattcgtc gacgtcatac actcctgcgg gggtgtgtta ggctttcttc
3181 agccgctggg aaaagcagac ttttatccga atgctggtac ggcgattcag cccggatgtt
3241 gctgcgtccc tgagataatg ggtaaattat cgccgtcatt agcgcgaatt cttgtatgga
3301 aaacaaaaca ttttatcctt tccattctag aggcttgcag tcatggacga tcatatgtat
3361 acttcacgga aagtataaat tcgaaaacag gactgcctgc taggaaatgc gacagctggg
3421 attcgtacat gaccgggaaa tgcgccaatt cgcaggtagt gctcatggga gagcatgttg
3481 atcagaccgc taagggccta ttctttctta gaacgagatc ggatccgcct tacgcgtaca
3541 taccggaagt aactaacaat aatgtgtcta cgtgaaaatg acacacagat gatcacacac
3601 atccttttaa aatgcgtatt tcgaaattat tcttattatc ttggatccca aaatttactg
3661 acaaaagcaa gaacagcaaa tataaaatat ctggctttaa taaatagtaa ttacattctt
3721 atacacatga ctgagatata ataaacgtag cgacgaacca attgtctgaa ttattataat
3781 ctaccttacc acgaagaaaa gctcgtaaaa attttatgca ccaatgtcgc gtcactcggg
3841 catttgttat gttattcacg cgatggttaa aaaatgtaca gcaccaacga acacgggaat
3901 ggcttgacat ttaaattggt ttgtaaagca aagttgtgac atattttttg cggtaacgat
3961 gcgtagctga taggaccatt acactgtcct taatgctcaa ggcgtataga tggttcaaca
4021 taacgtgatt tggttcaggt agaagagtag gctcgcagga taatggtgtg tctttgttaa
4081 ggataacttg cagcaggtgc ggcggtagga tgggtgggcc ggttatcttc tcccaaggtt
4141 tatgcggtgg tatctcctga ccatactctg tttgcgtact actagtaacg ccctcgctat
4201 cctttgcgag agcttgaaat acttcaaagt cggactttct tacagaaact aaattgttct
4261 ttgagcccat accattgtca acaattttca gtccaggatc gtgcctccat tcaccgtcga
4321 caaaaaattt atactggtgt tctccttctg gcaaatcgat tattgtgaca aaatccccgt
4381 gacttttcac cattggtaat gtcttccatc cagtgaatgt tccactgatg tatacctgct
4441 ttccacctcc ttcccacttg aagactgtcg gtagcacttt gctgtctgca acctttgttc
4501 cctcggacac tgtgttagat cttggtcgct gtgatccaaa atcgtcccca tcctttgcaa
4561 agtatggctc ttcttcctca tgggaggact gaaataccag cttctgactt tctggctttt
4621 tgtcaaagat gaatgcctgg ccttcctttc ctggagagga tggaggatga tccttgctat
4681 gccggtgctc tctgctcact gtagagccat gatgatgacc aacaggctgg ttactgcccg
4741 cattacccat tactgcatct aagttctggt gctccgatga cgcgtcaacg acgaatcggg
4801 aatgtaaaca tttactgacg acgttaaagc taggttggtc cgatctcgga aaaaatatac
4861 gatgcgattc tatacttac
//