LOCUS KX621302 3143 bp DNA linear HUM 27-AUG-2016 DEFINITION Homo sapiens isolate lbc4-HLA-A2 MHC class I antigen (HLA-A) gene, complete cds. ACCESSION KX621302 VERSION KX621302.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3143) AUTHORS Gowda,M. TITLE Comparative Analyses of Low, Medium and High-Resolution HLA TypingTechnologies for Human Populations JOURNAL J Clin Cell Immunol 7 (2), 1-8 (2016) REFERENCE 2 (bases 1 to 3143) AUTHORS Gowda,M. TITLE Direct Submission JOURNAL Submitted (29-JUL-2016) Genomics Discovery Program, Transdisciplinary University, Foundation for Revitalization of Local Health Traditions, 74/2, Jarakbande Kaval, Post Attur, Via Yelahanka, Bangalore, Karnataka 560064, India COMMENT ##Assembly-Data-START## Assembly Method :: SMRT Analysis Software v. version 2.3 Assembly Name :: PacBio Assembly Coverage :: More than 100x Sequencing Technology :: Pacific Biosciences ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3143 /organism="Homo sapiens" /mol_type="genomic DNA" /isolate="lbc4-HLA-A2" /isolation_source="TTK Blood Bank" /specimen_voucher="lbc4_C0_P0_NR150_IND_A_03010101" /db_xref="taxon:9606" /geo_loc_name="India" /lat_lon="12.9716 N 77.5946 E" /collection_date="01-Mar-2016" gene <30..>2931 /gene="HLA-A" mRNA join(<30..102,233..502,744..1019,1598..1873,1976..2092, 2535..2567,2710..2757,2927..>2931) /gene="HLA-A" /product="MHC class I antigen" CDS join(30..102,233..502,744..1019,1598..1873,1976..2092, 2535..2567,2710..2757,2927..2931) /gene="HLA-A" /codon_start=1 /product="MHC class I antigen" /protein_id="AOE46676.1" /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEP RFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDL GTLRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAA DMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPI SDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSG EEQRYTCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRR KSSDRKGGSYTQAASSDSAQGSDVSLTACKV" BASE COUNT 606 a 895 c 973 g 669 t ORIGIN 1 catgtactga tacacatcag acgccgagga tggccgtcat ggcgccccga accctcctcc 61 tgctactctc gggggccctg gccctgaccc agacctgggc gggtgagtgc ggggtcggga 121 gggaaaccgc ctctgcgggg agaagcaagg ggccctcctg gcgggggcgc aggaccgggg 181 gagccgcgcc gggacgaggg tcgggcaggt ctcagccact gctcgccccc aggctcccac 241 tccatgaggt atttcttcac atccgtgtcc cggcccggcc gcggggagcc ccgcttcatc 301 gccgtgggct acgtggacga cacgcagttc gtgcggttcg acagcgacgc cgcgagccag 361 aggatggagc cgcgggcgcc gtggatagag caggaggggc cggagtattg ggaccaggag 421 acacggaatg tgaaggccca gtcacagact gaccgagtgg acctggggac cctgcgcggc 481 tactacaacc agagcgaggc cggtgagtga ccccggccgg gggcgcaggt caggacccct 541 catcccccac ggacgggcca ggtcgcccac agtctccggg tccgagatcc accccgaagc 601 cgcgggaccc cgagaccctt gccccgggag aggcccaggc gcctttaccc ggtttcattt 661 tcagtttagg ccaaaaatcc ccccgggttg gtcggggctg ggcggggctc gggggactgg 721 gctgaccgcg gggtcggggc caggttctca caccatccag ataatgtatg gctgcgacgt 781 ggggtcggac gggcgcttcc tccgcgggta ccggcaggac gcctacgacg gcaaggatta 841 catcgccctg aacgaggacc tgcgctcttg gaccgcggcg gacatggcgg ctcagatcac 901 caagcgcaag tgggaggcgg cccatgaggc ggagcagttg agagcctacc tggatggcac 961 gtgcgtggag tggctccgca gatacctgga gaacgggaag gagacgctgc agcgcacggg 1021 taccaggggc cacggggcgc ctccctgatc gcctgtagat ctcccgggct ggcctcccac 1081 aaggagggga gacaattggg accaacacta gaatatcacc ctccctctgg tcctgaggga 1141 gaggaatcct cctgggttcc agatcctgta ccagagagtg actctgaggt tccgccctgc 1201 tctctgacac aattaaggga taaaatctct gaaggagtga cgggaagacg atccctcgaa 1261 tactgatgag tggttccctt tgacaccggc agcagccttg ggcccgtgac ttttcctctc 1321 aggccttgtt ctctgcttca cactcaatgt gtgtgggggt ctgagtccag cacttctgag 1381 tccctcagcc tccactcagg tcaggaccag aagtcgctgt tcccttctca gggaatagaa 1441 gattatccca ggtgcctgtg tccaggctgg tgtctgggtt ctgtgctctc ttccccatcc 1501 cgggtgtcct gtccattctc aagatggcca catgcgtgct ggtggagtgt cccatgacag 1561 atgcaaaatg cctgaatttt ctgactcttc ccgtcagacc cccccaagac acatatgacc 1621 caccacccca tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 1681 gcggagatca cactgacctg gcagcgggat ggggaggacc agacccagga cacggagctc 1741 gtggagacca ggcctgcagg ggatggaacc ttccagaagt gggcggctgt ggtggtgcct 1801 tctggagagg agcagagata cacctgccat gtgcagcatg agggtctgcc caagcccctc 1861 accctgagat ggggtaagga gggagatggg ggtgtcatgt ctcttaggga aagcaggagc 1921 ctctctggag acctttagca gggtcagggc ccctcacctt cccctctttt cccagagctg 1981 tcttcccagc ccaccatccc catcgtgggc atcattgctg gcctggttct ccttggagct 2041 gtgatcactg gagctgtggt cgctgccgtg atgtggagga ggaagagctc aggtggagaa 2101 ggggtgaagg gtggggtctg agatttcttg tctcactgag ggttccaagc cccagctaga 2161 aatgtgccct gtctcattac tgggaagcac cgtccacaat catgggccta cccagtctgg 2221 gccctgtgtg ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta 2281 tcaccttgat tacggcggtg atgggacctg atcccagcag tcacaagtca caggggaagg 2341 tccctgagga cagacctcag gagggctatt ggtccaggac ccacacctgc tttcttcatg 2401 tttcctgatc ccgccctggg tctgcagtca cacatttctg gaaacttctc tggggtccaa 2461 gactaggagg ttcctctagg accttaaggc cctggctcct ttctggtatc tcacaggaca 2521 ttttcttctc acagatagaa aaggagggag ttacactcag gctgcaagta agtatgaagg 2581 aggctgatgc ctgaggtcct tgggatattg tgtttgggag cccatggggg agcccaccca 2641 cctcacaatt cctcctctag ccacatcttc tgtgggatct gaccaggttc tgtttttgtt 2701 ctaccccagg cagtgacagt gcccagggct ctgatgtgtc cctcacagct tgtaaaggtg 2761 agagcttgga ggacctaatg tgtgttgggt gttgggcgga acagtggaca cagctgtgct 2821 atggggtttc tttgcattgg atgtattgag catgcgatgg gctgtttaag gtgtgacccc 2881 tcactgtgat ggatatgaat ttgttcatga atattttttt ctatagtgtg agacagctgc 2941 cttgtgtggg actgagaggc aagagttgtt cctgcccttc cctttgtgac ttgaagaacc 3001 ctgactttgt ttctgcaaag gcacctgcat gtgtctgtgt tcgtgtaggc ataatgtgag 3061 gaggtgggga gaccacccca cccccatgtc caccatgacc ctcttcccac gctgacctgt 3121 gctcccatgt gtatcagtac atg //