LOCUS KV862276 557052 bp DNA linear CON 16-NOV-2016 DEFINITION Lupinus angustifolius cultivar Tanjil unplaced genomic scaffold Scaffold_327, whole genome shotgun sequence. ACCESSION KV862276 MLAU01000000 VERSION KV862276.1 DBLINK BioProject: PRJNA299755 BioSample: SAMN04215042 KEYWORDS WGS. SOURCE Lupinus angustifolius (narrow-leaved blue lupine) ORGANISM Lupinus angustifolius Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus. REFERENCE 1 (bases 1 to 557052) AUTHORS Hane,J.K., Ming,Y., Kamphuis,L.G., Nelson,M.N., Garg,G., Atkins,C.A., Bayer,P.E., Bravo,A., Bringans,S., Cannon,S., Edwards,D., Foley,R., Gao,L.L., Harrison,M.J., Huang,W., Hurgobin,B., Li,S., Liu,C.W., McGrath,A., Morahan,G., Murray,J., Weller,J., Jian,J. and Singh,K.B. TITLE A comprehensive draft genome sequence for lupin (Lupinus angustifolius), an emerging health food: insights into plant-microbe interactions and legume evolution JOURNAL Plant Biotechnol. J. (2016) In press PUBMED 27557478 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 557052) AUTHORS Hane,J.K., Ming,Y., Kamphuis,L.G., Nelson,M.N., Garg,G., Atkins,C., Bayer,P., Bravo,A., Bringans,S., Cannon,S., Edwards,D., Foley,R., Gao,L.-L., Harrison,M., Huang,W., Hurgobin,B., Li,S., Liu,C.-W., Mcgrath,A., Morahan,G., Murray,J., Weller,J., Jian,J. and Singh,K. TITLE Direct Submission JOURNAL Submitted (28-SEP-2016) Molecular Plant Pathology & Crop Genomics, CSIRO, 147 Underwood Avenue, Perth, WA 6014, Australia COMMENT Sequencing was done with Illumina HiSeq 2500 paired-ends and Illumina HiSeq 2500 mate-paired. This assembly was constructed with CutAdapt (min length 25 bp, rounds 3, match length 5 bp) v. 1.1; FLASH (mate-paired 3' overlap read pairs discarded) v. 1.2.2; Kmerfreq v. 2015-05-28; SOAPdenovo2 (PE only) v. 2015-05-28; SSPACE2 (5 rounds per library insert size, ascending size order) v. 2.0; BGI GapCloser (5 rounds, PE libraries only) v. 2015-05-28 and 100kb BAC-end scaffolding - Bambus (range 50-400,000) v. 2015-05-28. Gaps of unknown size >10 bp were converted to 100bp, Repeatmasker(-no _is -norna -noint) and Tandem Repeats Finder (2 7 7 80 10 50 50 -f -d -m -h) were run, and then sequences were discarded if they were < 200 bp length OR >= 50% repetitive, simple repeat or unknown N bases. LG mapping was done via ePCR (<=2gap, <=2mis, amplicon 10-1000bp(Fluidigm) 10-5000bp(other)) and Glycine max synteny: MUMmer (promer --mum --filter, >=90% sim). ##Genome-Assembly-Data-START## Assembly Date :: 28-MAY-2015 Assembly Method :: CutAdapt v. 1.1; FLASH v. 1.2.2; Kmerfreq v. 2015-05-28; SOAPdenovo2 v. 2015-05-28; SSPACE2 v. 2.0; BGI GapCloser v. 2015-05-28 Assembly Name :: LupAngTanjil_v1.0 Long Assembly Name :: Lupinus_angustifolius_cv_Tanjil_pschrom_v 1.0 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 245.0x Sequencing Technology :: Illumina HiSeq 2500 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..557052 /organism="Lupinus angustifolius" /mol_type="genomic DNA" /submitter_seqid="Scaffold_327" /cultivar="Tanjil" /db_xref="taxon:3871" /chromosome="Unknown" /tissue_type="whole plant" /dev_stage="seedling" /geo_loc_name="Australia: Western Australia" assembly_gap 547..646 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 849..948 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1767..1866 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3490..3589 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4200..4299 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5274..5373 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5949..6048 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6477..6576 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6868..6967 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7645..7744 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7983..8082 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8304..8403 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8625..8724 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10782..10881 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21311..21410 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21779..21878 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 27325..27424 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 30272..30371 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 34590..34689 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 70467..70566 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 77374..77473 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 111299..111398 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 119905..120004 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 124055..124154 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 132135..132234 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 175379..175478 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <206958..>212671 /locus_tag="TanjilG_18740" mRNA join(<206958..207172,207375..207480,208044..208079, 208625..208707,208846..208899,209303..209354, 209643..209707,210601..210657,210776..210848, 210961..211047,211121..211277,211405..211529, 212432..>212671) /locus_tag="TanjilG_18740" /product="hypothetical protein" CDS join(206958..207172,207375..207480,208044..208079, 208625..208707,208846..208899,209303..209354, 209643..209707,210601..210657,210776..210848, 210961..211047,211121..211277,211405..211529, 212432..212671) /locus_tag="TanjilG_18740" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89572.1" /translation="MDPSSASSTIPTVTQRDQWMVESQVFQIFQLFSSIPQTAQSLML ELQRDNHITYLTKSLSHLPPSFSVLDANRPWLCYWIIHSIALLGESLDYQIQHNAIDF LNRCQDPNGGYAGGPGQMPHLATTYAAVNALITLGGQKALASINRDKLYGFLRRMKQP NGGFRMHDEGEIDARACYTAISVASVLNILDDELIKNVGDYILSCQTYEGGIAGEPGA EAHGGYTFCGLAAMVLIGEVNRLDLPRLVDWVVFRQGKECGFQGRTNKLVDGCYSFWQ GGAVALLQRLYSVVEEQLAEASQISPKSDVAEEEQESLYGTSRNATCHFTHGGTGEPG FSDFKNIGYNFINEWRARDPLFHSIALQQYILLCSQEQEGGLRDKPGKRRDHYHTCYC LSGLSLCQYSWSKNPDSPPLPKVVLGPYSNLLEPIHPLYNIVLERYREAHEFFFVES" gene <215196..>218184 /locus_tag="TanjilG_18741" mRNA join(<215196..215399,216994..217317,217489..217648, 217919..>218184) /locus_tag="TanjilG_18741" /product="hypothetical protein" CDS join(215196..215399,216994..217317,217489..217648, 217919..218184) /locus_tag="TanjilG_18741" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89573.1" /translation="MANTPTHIKAWIYSEYGKTQDVLKFDTNVEIPEIKEDQVLIKVV AAALNPIDYKRNLGYLRSFGTPLPAVPGYDVAGVVVRIGSQVTKFKVGDEVYGDINEI AIQNVKIIGSLAEYTTAEEKLLAHKPNNLSFSEAASLPAAIITAYQGLETVQFSAGKS ILVLGGAGGVGTLIIQLAKHVFGASKIAATASTAKLELLRELGADLPIDYTKEKFEEL PEKFDVVYDTVGESERALKAIKEGGKVITIVRSGVASAIQFGVTSDGSVLEKLKPYLE SGKVKAVLDPKGPFPFSQTVEAFSHLETNRAVGKVVIYPIP" assembly_gap 222538..222637 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 224390..224489 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <248469..>249943 /locus_tag="TanjilG_18742" mRNA join(<248469..248684,248788..249111,249398..249557, 249678..>249943) /locus_tag="TanjilG_18742" /product="hypothetical protein" CDS join(248469..248684,248788..249111,249398..249557, 249678..249943) /locus_tag="TanjilG_18742" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89574.1" /translation="MSNIITTIPSHIKAWIYPEYGKTQDILKFDPNVPIPLIKDDQAL IKVVAAALNPIDYKRASGNFKSFDIPLPAVPGYDVAGVVVKVGSQVKKFKVGDEVYGD INENAIRNVKTIGSLAEYTTAEEKLLAHKPNNLSFIEAASLPLAIITAYQGLERVEFS AEKSILVLGGAGGVGSLVIQIAKNVFGSSKVAATASTAKLELLRELGADLPIDYTKEK FEELPEKFDVVYDAVGESERALKAIKEGGKVVTIVDHGNVSAIRFALTSDGAVLEKLQ PYLESGKVKPILDPKSPFPFSQTVEAFSYLETNRAIGKVVIHPIP" gene <252973..>254738 /locus_tag="TanjilG_18743" mRNA join(<252973..253176,253339..253662,254199..254358, 254473..>254738) /locus_tag="TanjilG_18743" /product="hypothetical protein" CDS join(252973..253176,253339..253662,254199..254358, 254473..254738) /locus_tag="TanjilG_18743" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89575.1" /translation="MANTPSHIKAWVYSEYGKTQDILKFDSNVPIPDIKEDQVLIKVV AAALNPIDYKRALGYFNNTDSPLPTVPGYDVAGVIVKVGSEIKKLKVGDEVYGDINEN AINHPKTIGSLAEYTVAEEKLLSHKPNNLSFVEAASLPLAIITAYQGLERAELSAGKS ILILGGAGGVGSLAIQIAKHVFSASKVAATASTAKQDLLRKLGADLAIDYTKENFEEL PEKFDIVFDAVGESEKALKAIKEGGKVVTIVRPATPPAIQFILTSDGAVLEKLQPYLE SGKVKPVLDPKSPFPFSQTVEAFSYLETNRAIGKVVIHPIP" gene <259851..>262296 /locus_tag="TanjilG_18744" mRNA join(<259851..261763,262080..>262296) /locus_tag="TanjilG_18744" /product="hypothetical protein" CDS join(259851..261763,262080..262296) /locus_tag="TanjilG_18744" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89576.1" /translation="MSGLAMEESNVVNGAVEECSGSYTPNKENITTQQASPRSTLSPR SIQSSDSIDLAIDGIVDTSIEQLYHNVCEMRSSDQSPSRTSFYSYGEESSRIDSELCH LVGDIVDFEITKEVVTENKEGSNPEKDVVSCGNDPTKKGYIPKKVIEGSAKSTPKGRN SSAYKRNNEKAMRKANGVYNTRKQNSKLGLKGIEESDAYLGPYLLKQTRDMISSGENP HKALVLGLRALQSFEMLSENNKPSLEMVMCLHVLAAIYFNLGQYNEAIRVLERSIDIP VLEDGQDHALAKFAGCMQLGDTYAMIGQIENSILFYTAGLEIQGQALGETDPRFGETC RYVAEAHVQALQFDEAEKLCQRALDIHRGNGSPASLEEAADRRLMGLICDSKGDYEAA LEHYVLASMAMAANGQEIDVAAVDCSIGDTYLSLARYDEAVFSYQKALTVFKSTKGEK HPTVASVYVRLADLYNKIGKLKESKSYCENSLRILSKIHPGIPLEEVASGLIDVAAIY QSMNDIDRGLKLLKKALKIYGNAPGQQRTIAGIEAQMGVMYYMLGNYSDSYNIFKSAI TKFCASGEKKSALFGIALNQMGLTCVQRYAINEAAELFEEARTILEKEYGPYHSDTLG VYSNLAGTYDAMGRVDDAIEILEHVVGMREEKLGTANPDVDDEKRRLEELFKEAGRTR NRKTRRSLENLLDANSQLIEEHLIKVV" assembly_gap 272360..272459 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 276675..276774 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 280761..280860 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 285042..285141 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 285509..285608 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 285809..285908 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 290188..290287 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 291241..291340 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 292978..293077 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 294892..294991 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 302623..302722 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 305234..305333 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 305628..305727 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 307013..307112 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 307396..307495 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 307741..307840 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 308148..308247 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 309492..309591 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 314332..314431 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 321706..321805 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <323248..>327843 /locus_tag="TanjilG_18745" mRNA join(<323248..323462,323665..323770,324334..324384, 324915..324997,325593..325644,325933..325997, 326891..326947,327066..327138,327251..327337, 327411..327567,327695..>327843) /locus_tag="TanjilG_18745" /product="hypothetical protein" CDS join(323248..323462,323665..323770,324334..324384, 324915..324997,325593..325644,325933..325997, 326891..326947,327066..327138,327251..327337, 327411..327567,327695..327843) /locus_tag="TanjilG_18745" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89577.1" /translation="MDPSSASSTIPTVTQRDQWMVESQVFQIFQLFSSIPQTAQSLML ELQRDNHITYLTKSLSHLPPSFSVLDANRPWLCYWIIHSIALLGESLDYQIQHNAIDF LNRCQDPNGGYAGGPGQASNCYMPHLATTYAAVNALITLGGQKALASINRMHDEGEID ARACYTAISVASVLNILDDELIKNVGDYILSCQTYEGGIAGEPGAEAHGGYTFCGLAA MVLIGEVNRLDLPRLVDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLYSV VEEQLAEASQISPKSDVAEEEQESLYGTSRNATCHFTHGGTGEPGFSDFKNIGYNFIN EWRARDPLFHSIALQQYILLCSQVYILSIG" assembly_gap 327974..328073 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <333233..>334375 /locus_tag="TanjilG_18746" mRNA <333233..>334375 /locus_tag="TanjilG_18746" /product="hypothetical protein" CDS 333233..334375 /locus_tag="TanjilG_18746" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89578.1" /translation="MEARISSSLGLPSPKPNHQSPSLTDFTGLLNHFTTTLTHTHHHN RHHTLPFASTSTSNPTRFRPTLTPKIQTLVKNLTLLERALIGAAGGGIAGAFTYVCLL PLDAIKTKMQTKGASQIYKNALDAVVKTFNSEGILGFYTGVSAVIVGSTASSAVYFGT CEFGKSFLSKLPNYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLL RILEKDGVLGLYAGYSATLLRNLPAGVLSYSSFEYLKSAVLSKTEKEHLEPVQSVLCG ALAGAISASITTPLDVVKTRLMTQVHGEAVNKVAAVMYDGVSATVKAILKEEGWVGLT RGMGPRVLHSACFSALGYFAFETARLSILHEYLRQKELSEVSVSTT" gene <337898..>340228 /locus_tag="TanjilG_18747" mRNA join(<337898..339084,340204..>340228) /locus_tag="TanjilG_18747" /product="hypothetical protein" CDS join(337898..339084,340204..340228) /locus_tag="TanjilG_18747" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89579.1" /translation="MKPFSPPSRHFPELQALVSSITRTVANPQNPVLAEQLLGKALDQ HPDIKTLKNVHSKIYYLSFHENTSLGIKLMRAYAACGKPGLARKVFDEIPERNVVVYN VMIRSYVNNHLYNNALCVFKDVVSGGFTGDNYTYPCVLKACSCSNNLRFGLQLHGAVL KVRLDSNLFVGNGLIALYGKCGCLLEARRILDEMSSKDVVSWNSMVAGYAQNLRFDDA LEICREMEALQQKSDAGTMASLMPAITNTSYDNVLYVREMFLNLEKKSLVSWNVMISV YMKNSMPSEAVDLYLQMENGGVERDAITCASVLPACGDLSALLLGKRIHEYVERKKLC PNLLLENALIDMYARCGCLDDARKVFDKMKFRDVASWTSLISAYGTTGQGCNAVELFT EMQKELLFEAG" gene complement(<342135..>348269) /locus_tag="TanjilG_18748" mRNA complement(join(<342135..342242,342918..343026, 343203..343351,343458..343560,343778..343953, 344061..344123,344323..344411,344514..344624, 344760..344894,345280..345445,347212..347499, 348039..>348269)) /locus_tag="TanjilG_18748" /product="hypothetical protein" CDS complement(join(342135..342242,342918..343026, 343203..343351,343458..343560,343778..343953, 344061..344123,344323..344411,344514..344624, 344760..344894,345280..345445,347212..347499, 348039..348269)) /locus_tag="TanjilG_18748" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89580.1" /translation="MSQVVATRSIQSTLLSPVSGSAHERAQKFLKPATFSSMVFPPEG NKWSQIGFRSFSISARKSAPVEVLPVSPEDDSKIEERLQHLRAVQQFGDSSSGMWSKP TVRRKTKIVCTIGPSTDTKEMIWQLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQ SKDNVIAIMLDTKGPEVRSGDLPQPVTLNSGQEFTFTIQRGVGTPDCVSVNYDDFVND VEAGDMLLVDGGMMSFLVKSKTRDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKD WDDIKFGVDNQVDFYAVSFVKDAEVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI ITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPT RAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNIG QVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGSMAILLSHYRPSSTIFAFTNEKRVQ QKLALYQGVCPIYMEFCNDAEATFIRALDMLQKQGMVKKGEEVALVQSGRQPIWRFQS THNIQIRKV" assembly_gap 345083..345182 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 346040..346139 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 350460..350559 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<356213..>358908) /locus_tag="TanjilG_18749" mRNA complement(join(<356213..356600,356687..356718, 356999..357769,358161..358649,358774..>358908)) /locus_tag="TanjilG_18749" /product="hypothetical protein" CDS complement(join(356213..356600,356687..356718, 356999..357769,358161..358649,358774..358908)) /locus_tag="TanjilG_18749" /codon_start=1 /product="hypothetical protein" /protein_id="OIV89581.1" /translation="MENNIQREVAEQGSPIVPSLIKYISSNEVAGFDTSDSQCPSPSP MESGATSPGGRSDEPLVIHHQRKQSVSMPLTSDEVIQPQNTKRVFFSGETVLIDGISS SSKAAVKPPHPSKCYSQPMAKDFVFPKAPNGGSYSNHPGIKAFRDKRFDSFKTWSGGL ERQLSILRGKSPKHPAHDQCSSFRNTEKNVPVDRYFDALEGPELETLRASEETVLPQD RKWPFLLRFPVSSFGICLGVSSQAILWKTLATSPSTDFLHISLKVNLILWFISIALVA TVFTIYILKFILYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVAKNLHHSLWY CLMVPVFCLELKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLKEGPIF FFAIGLAHYIVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWAKIQGSFDYG SRIAYFIAMFLYFSLAVRINFFRGFKFSLAWWAYTFPMTGAAIATIRYSNQVPTIETK ALCVILGLISTLTVTALFVSTILHAFLFQDLFPNDLAIAISDIKTKQHKKWFHLRHGS YDAKEIDNYLKFVNSDQVDIEASTTTQPSNFLDNSLPV" assembly_gap 385430..385529 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 386763..386862 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 391641..391740 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 394252..394351 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 395069..395168 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 395408..395507 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 395713..395812 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 397018..397117 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 399114..399213 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 399604..399703 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 401762..401861 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 402823..402922 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 404851..404950 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 406460..406559 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 407323..407422 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 407659..407758 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 408183..408282 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 412212..412311 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 434808..434907 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 436166..436265 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 437306..437405 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 439008..439107 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 451468..451567 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 458195..458294 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 459083..459182 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 459591..459690 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 461247..461346 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 461750..461849 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 463593..463692 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 466707..466806 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 474396..474495 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 475048..475147 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 475476..475575 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 476006..476105 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 479572..479671 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 479895..479994 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 480649..480748 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 481445..481544 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 482134..482233 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 482503..482602 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 482837..482936 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 483310..483409 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 484967..485066 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 487522..487621 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 491808..491907 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 508177..508276 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 527865..527964 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 528216..528315 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 529042..529141 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 529526..529625 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 530009..530108 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 534068..534167 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 535856..535955 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 540321..540420 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 540817..540916 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 548025..548124 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 548385..548484 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 549241..549340 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 551608..551707 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 555859..555958 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 556666..556765 /estimated_length=unknown /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(MLAU01042798.1:1..546,gap(unk100),MLAU01042799.1:1..202, gap(unk100),MLAU01042800.1:1..818,gap(unk100), MLAU01042801.1:1..1623,gap(unk100),MLAU01042802.1:1..610, gap(unk100),MLAU01042803.1:1..974,gap(unk100), MLAU01042804.1:1..575,gap(unk100),MLAU01042805.1:1..428, gap(unk100),MLAU01042806.1:1..291,gap(unk100), MLAU01042807.1:1..677,gap(unk100),MLAU01042808.1:1..238, gap(unk100),MLAU01042809.1:1..221,gap(unk100), MLAU01042810.1:1..221,gap(unk100),MLAU01042811.1:1..2057, gap(unk100),MLAU01042812.1:1..10429,gap(unk100), MLAU01042813.1:1..368,gap(unk100),MLAU01042814.1:1..5446, gap(unk100),MLAU01042815.1:1..2847,gap(unk100), MLAU01042816.1:1..4218,gap(unk100),MLAU01042817.1:1..35777, gap(unk100),MLAU01042818.1:1..6807,gap(unk100), MLAU01042819.1:1..33825,gap(unk100),MLAU01042820.1:1..8506, gap(unk100),MLAU01042821.1:1..4050,gap(unk100), MLAU01042822.1:1..7980,gap(unk100),MLAU01042823.1:1..43144, gap(unk100),MLAU01042824.1:1..47059,gap(unk100), MLAU01042825.1:1..1752,gap(unk100),MLAU01042826.1:1..47870, gap(unk100),MLAU01042827.1:1..4215,gap(unk100), MLAU01042828.1:1..3986,gap(unk100),MLAU01042829.1:1..4181, gap(unk100),MLAU01042830.1:1..367,gap(unk100), MLAU01042831.1:1..200,gap(unk100),MLAU01042832.1:1..4279, gap(unk100),MLAU01042833.1:1..953,gap(unk100), MLAU01042834.1:1..1637,gap(unk100),MLAU01042835.1:1..1814, gap(unk100),MLAU01042836.1:1..7631,gap(unk100), MLAU01042837.1:1..2511,gap(unk100),MLAU01042838.1:1..294, gap(unk100),MLAU01042839.1:1..1285,gap(unk100), MLAU01042840.1:1..283,gap(unk100),MLAU01042841.1:1..245, gap(unk100),MLAU01042842.1:1..307,gap(unk100), MLAU01042843.1:1..1244,gap(unk100),MLAU01042844.1:1..4740, gap(unk100),MLAU01042845.1:1..7274,gap(unk100), MLAU01042846.1:1..6168,gap(unk100),MLAU01042847.1:1..17009, gap(unk100),MLAU01042848.1:1..857,gap(unk100), MLAU01042849.1:1..4320,gap(unk100),MLAU01042850.1:1..34870, gap(unk100),MLAU01042851.1:1..1233,gap(unk100), MLAU01042852.1:1..4778,gap(unk100),MLAU01042853.1:1..2511, gap(unk100),MLAU01042854.1:1..717,gap(unk100), MLAU01042855.1:1..239,gap(unk100),MLAU01042856.1:1..205, gap(unk100),MLAU01042857.1:1..1205,gap(unk100), MLAU01042858.1:1..1996,gap(unk100),MLAU01042859.1:1..390, gap(unk100),MLAU01042860.1:1..2058,gap(unk100), MLAU01042861.1:1..961,gap(unk100),MLAU01042862.1:1..1928, gap(unk100),MLAU01042863.1:1..1509,gap(unk100), MLAU01042864.1:1..763,gap(unk100),MLAU01042865.1:1..236, gap(unk100),MLAU01042866.1:1..424,gap(unk100), MLAU01042867.1:1..3929,gap(unk100),MLAU01042868.1:1..22496, gap(unk100),MLAU01042869.1:1..1258,gap(unk100), MLAU01042870.1:1..1040,gap(unk100),MLAU01042871.1:1..1602, gap(unk100),MLAU01042872.1:1..12360,gap(unk100), MLAU01042873.1:1..6627,gap(unk100),MLAU01042874.1:1..788, gap(unk100),MLAU01042875.1:1..408,gap(unk100), MLAU01042876.1:1..1556,gap(unk100),MLAU01042877.1:1..403, gap(unk100),MLAU01042878.1:1..1743,gap(unk100), MLAU01042879.1:1..3014,gap(unk100),MLAU01042880.1:1..7589, gap(unk100),MLAU01042881.1:1..552,gap(unk100), MLAU01042882.1:1..328,gap(unk100),MLAU01042883.1:1..430, gap(unk100),MLAU01042884.1:1..3466,gap(unk100), MLAU01042885.1:1..223,gap(unk100),MLAU01042886.1:1..654, gap(unk100),MLAU01042887.1:1..696,gap(unk100), MLAU01042888.1:1..589,gap(unk100),MLAU01042889.1:1..269, gap(unk100),MLAU01042890.1:1..234,gap(unk100), MLAU01042891.1:1..373,gap(unk100),MLAU01042892.1:1..1557, gap(unk100),MLAU01042893.1:1..2455,gap(unk100), MLAU01042894.1:1..4186,gap(unk100),MLAU01042895.1:1..16269, gap(unk100),MLAU01042896.1:1..19588,gap(unk100), MLAU01042897.1:1..251,gap(unk100),MLAU01042898.1:1..726, gap(unk100),MLAU01042899.1:1..384,gap(unk100), MLAU01042900.1:1..383,gap(unk100),MLAU01042901.1:1..3959, gap(unk100),MLAU01042902.1:1..1688,gap(unk100), MLAU01042903.1:1..4365,gap(unk100),MLAU01042904.1:1..396, gap(unk100),MLAU01042905.1:1..7108,gap(unk100), MLAU01042906.1:1..260,gap(unk100),MLAU01042907.1:1..756, gap(unk100),MLAU01042908.1:1..2267,gap(unk100), MLAU01042909.1:1..4151,gap(unk100),MLAU01042910.1:1..707, gap(unk100),MLAU01042911.1:1..287) //