LOCUS       KV424135               39421 bp    DNA     linear   CON 27-APR-2016
DEFINITION  Calocera cornea HHB12733 unplaced genomic scaffold
            CALCOscaffold_222, whole genome shotgun sequence.
ACCESSION   KV424135 LKHQ01000000
VERSION     KV424135.1
DBLINK      BioProject: PRJNA210204
            BioSample: SAMN02745930
KEYWORDS    WGS.
SOURCE      Calocera cornea HHB12733
  ORGANISM  Calocera cornea HHB12733
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Dacrymycetes; Dacrymycetales; Dacrymycetaceae; Calocera.
REFERENCE   1  (bases 1 to 39421)
  AUTHORS   Nagy,L.G., Riley,R., Tritt,A., Adam,C., Daum,C., Floudas,D.,
            Sun,H., Yadav,J.S., Pangilinan,J., Larsson,K.H., Matsuura,K.,
            Barry,K., Labutti,K., Kuo,R., Ohm,R.A., Bhattacharya,S.S.,
            Shirouzu,T., Yoshinaga,Y., Martin,F.M., Grigoriev,I.V. and
            Hibbett,D.S.
  TITLE     Comparative Genomics of Early-Diverging Mushroom-Forming Fungi
            Provides Insights into the Origins of Lignocellulose Decay
            Capabilities
  JOURNAL   Mol. Biol. Evol. 33 (4), 959-970 (2016)
   PUBMED   26659563
REFERENCE   2  (bases 1 to 39421)
  AUTHORS   Riley,R., Sun,H., Nagy,L.G., Tritt,A., Adam,C., Daum,C.,
            Floudas,D., Yadav,J., Pangilinan,J., Larsson,K.-H., Matsuura,K.,
            Barry,K., Labutti,K., Kuo,R., Ohm,R., Bhattacharya,S., Shirozou,T.,
            Yoshinaga,Y., Martin,F.M., Hibbett,D.S., Grigoriev,I.V.,
            Nordberg,H.P., Cantor,M.N. and Hua,S.X.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (25-SEP-2015) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://genome.jgi.doe.gov/Calco1
            JGI Project ID: 1006895
            The DNA was provided by Laszlo Nagy(cortinarius2000@gmail.com)
            The strain is available from TUFC
            Contacts: Laszlo Nagy (cortinarius2000@gmail.com )
            Assembly and annotation done by JGI.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Metadata-START##
            Organism Display Name :: Calocera cornea HHB12733
            GOLD Stamp ID         :: Gp0025090
            ##Metadata-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Allpaths-LG v. R43241
            Assembly Name         :: Calco1
            Genome Coverage       :: 85x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..39421
                     /organism="Calocera cornea HHB12733"
                     /mol_type="genomic DNA"
                     /submitter_seqid="CALCOscaffold_222"
                     /strain="HHB12733"
                     /db_xref="taxon:1353952"
                     /chromosome="Unknown"
     gene            <120..>2924
                     /locus_tag="CALCODRAFT_488309"
     mRNA            join(<120..497,548..624,673..853,907..1091,1140..1365,
                     1414..1602,1650..1817,1864..2006,2058..2172,2223..2341,
                     2390..>2924)
                     /locus_tag="CALCODRAFT_488309"
                     /product="hypothetical protein"
     CDS             join(120..497,548..624,673..853,907..1091,1140..1365,
                     1414..1602,1650..1817,1864..2006,2058..2172,2223..2341,
                     2390..2924)
                     /locus_tag="CALCODRAFT_488309"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50923.1"
                     /db_xref="JGIDB:Calco1_488309"
                     /translation="MPPRTRGQRGQRGTRGLRGRAADNTAIPLPPRDLSKSDDISTPE
                     EYTKKADVTRVWKEYGVPRYTDREDSPPNYAGREWIWEHDDDDVNLGYWQLYLERREG
                     RLENPVLVDLRFNAEDPDEIPPIGTWEKENCLYQFMCHDRHIREYEWAEACRQPGYSR
                     HILKKFFDIFCHARRGNLSQNPEWEEYYAEDEEEYEVVDITGHFWRPGATPNSQELCY
                     TVVWGDDDGNAAIPEDEDEYREDNERDVWIKAWEAGSPESASGLWRYWVQTHDSMEGS
                     APALIYKYWQRNKEVAPRDRPEQAKRVMQMDRDYLWADGKVGNGVSKGTTKAETACNL
                     MAALGAPHARYRKLTHCSVCRGSFESSALADCNTCGRAFCITTAGGPGCADVTRATVD
                     TPEGIKCVKCCKDDKMSKPPYNYLGNLTQWSQGSVHAEPIIVVMVHWQEKDMHSMSDL
                     SSRIVKGYLGETYRSRKVAHRAHWVDVVLEDDCATWSSDQSNPVQAKGTRSIQVHIAE
                     LVRKMTYHYKKKFHFLMVVDVHSNDHDGKLLYNKGDTYHKFGTPLQVCTAIAGEVVPK
                     NACEESTLILLTCSGMVLKALPSVMACTVGFNTVISFTAKVFNSQRVAEIWLAPFLRA
                     FYRDHLPQEKAVLKGYTNEVSTPTFGLDIFVFGARGAGFRYTWGAPSKNLTGNENDLN
                     CPKCGMLMQYKKKTLEGAWHFTCRHKCKGRAVFRFTDGENSVYELHPNPVDANYRILK
                     IGLNIPSSGPYDIRPPLRPVDPKWLSVPGDV"
     gene            3440..5696
                     /locus_tag="CALCODRAFT_504141"
     mRNA            join(3440..3858,3913..3985,4043..4110,4167..4954,
                     5005..5696)
                     /locus_tag="CALCODRAFT_504141"
                     /product="hypothetical protein"
     CDS             join(3549..3858,3913..3985,4043..4110,4167..4954,
                     5005..5655)
                     /locus_tag="CALCODRAFT_504141"
                     /note="expressed protein"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50924.1"
                     /db_xref="JGIDB:Calco1_504141"
                     /translation="MAPPATAHSPPFYSYPIAPGVPVYPQPTDPIPSIDDITLLEGQL
                     RQRKDLAHANYDKSLRDLTVLGRIMEKVERVKERKAGETKLEEKEVRLGSLKPALPSL
                     VVPPERESALKDASVTPRSSVQPRKVIPKGVNKNKRKRVDSDDDDSYAPERRTPVSPP
                     PSYPKHKHPQHSSSSTALAKSKAPREPLPNMADDSYWRLPERPSLIPPHPPPPEPPVP
                     GPLHQQDVSIDLSDAKPPASQITADTFWKSVEPWIRDLGEEDVAAMSYIDDDPEPFVL
                     PPLGKHYLDRWADEDSSVYAASGQVQRADAKGQPFPPTQGYDPTDLTDQDWLSEEKSL
                     GPVAERLVSALQPKRPQAAPVGPDGQEDKRELIDAIAEELQVEEALTAGPLGDLRVSA
                     EELDVRIKRQLKELGLWSEPEPDFSAPEDDSLLAELRQCQKLLKDQMSLNAARKYRLL
                     KRCEDRLAYQDYVHQLERMDEQILSEYQKLSKKAAQEAKKSHGHARQASSSSVVHNFK
                     ANGKDRDREREREREREREREKEKERVSASHSPSVDPRSGSSAPDSTTAATKRPAVPP
                     ELLHAVRIRQRLVDELGSVFEQGERECPGRFWGLPEGSLYRGITVDEGRNVLRRVNVG
                     HPALM"
     gene            5998..8105
                     /locus_tag="CALCODRAFT_461088"
     mRNA            join(5998..6301,6352..6636,6691..6996,7045..7128,
                     7181..7619,7671..8105)
                     /locus_tag="CALCODRAFT_461088"
                     /product="tryptophanyl-tRNA synthetase"
     CDS             join(6057..6301,6352..6636,6691..6996,7045..7128,
                     7181..7619,7671..7847)
                     /locus_tag="CALCODRAFT_461088"
                     /note="GO_component: GO:5737 - cytoplasm;
                     GO_function: GO:166; aminoacyl-tRNA ligase activity -
                     nucleotide binding [Evidence 5524] [PMID 4812];
                     GO_process: GO:6412; tRNA aminoacylation for protein
                     translation - translation [PMID 6418]"
                     /codon_start=1
                     /product="tryptophanyl-tRNA synthetase"
                     /protein_id="KZT50925.1"
                     /db_xref="InterPro:IPR002305"
                     /db_xref="JGIDB:Calco1_461088"
                     /translation="MDLPPPSSVTALDPPSSTTVASKETHDSVADKISQLNLPEPEEI
                     RNQVRVKLQRRGTDDVTKEIAAMRLPEPEWLNKPKGESAPEVSLSVPGDVPPSQLAPQ
                     PNTVEVPSEVEQVVTPWDVQGSVTADGKQQAINYDKLIDQFGTRRVDSAILERFEKLT
                     GHKPHLLLRRGMFFSHRDLNGILDRYEKGKPFFLYTGRGPSSDSMHLGHMIPFVFTKW
                     LQDVFDVPLVIQLTDDEKFLFKHELKIEQVEGFSRTNARDIISCGFNLEKTFIFSDLA
                     FVGGAFYKNVVRIARTITLNQARAAFGFNDTDNIGKIHFCSIQAAPSFSNSFPQIFGT
                     KSDIPCLIPCAIDQDPYFRLTRDTAAKLKYPKPALLHSKFFPALQGPQTKMSASDPNS
                     TIYMSDTLNQIKNKIRKHAFSGGKETIEEHREMGGNPDVDVSYQYLGFFMDDDVEYAR
                     IGEEYRSGRLLTSELKDMAISLLQNFVKDFQEKRSKVTDAQIDAFMDGTRKIDPMPRK
                     AKQ"
     gene            complement(7637..8658)
                     /locus_tag="CALCODRAFT_161412"
     mRNA            complement(join(7637..8131,8184..8299,8349..8570,
                     8621..8658))
                     /locus_tag="CALCODRAFT_161412"
                     /product="hypothetical protein"
     CDS             complement(join(7945..8131,8184..8299,8349..8489))
                     /locus_tag="CALCODRAFT_161412"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50926.1"
                     /db_xref="JGIDB:Calco1_161412"
                     /translation="MRLPRARKKKSLRKAPPLGVYEACVTTSIFYRKKCLFRGQILDQ
                     FCDIITGNVAEKVAVVRSDAHIACAQIVAHSKADLTVLHTQKRAQMDAVLCVKMQYLN
                     YIKEVSNAHAALHDKNVALMTALKNTITTHDNNSLAGRLPAKLFS"
     gene            complement(8894..11546)
                     /locus_tag="CALCODRAFT_161357"
     mRNA            complement(join(8894..8954,9006..9457,9508..10860,
                     10932..11089,11138..11207,11256..11460,11510..11546))
                     /locus_tag="CALCODRAFT_161357"
                     /product="hypothetical protein"
     CDS             complement(join(9083..9457,9508..10860,10932..11089,
                     11138..11207,11256..11327))
                     /locus_tag="CALCODRAFT_161357"
                     /note="expressed protein"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50927.1"
                     /db_xref="JGIDB:Calco1_161357"
                     /translation="MVNFDTDQPMYADQDSFQIDIKDGSEISLMEIKYSTITEMRLLQ
                     GSSAETHRIRCTTKEPPKFPGKNFQLGIAETLKTVSFDIPKESSMHWKKLMESRHETR
                     NASVALEPISFPVEDSKTQHATSEEATTPARGKLNTVATAMIAEAAAASKPSARLDEA
                     AEKRTPSRYIGSKSSSQKSSGDQPAARTRLAHKALPDDGSSELSEDEDPPVRLPAKQR
                     SKKTASSISTARQPRQVENSVVSELSSPPTHNGSSHIATNSESPSPRATRKAAIVARS
                     LIQQQQPPTTQKAPTDQTPSHDLEDTPEIIEVSAIPEAVTPPAAEAPSEPTQSSGRFS
                     RARRHPDDGQEESPSSQDDSPPRGANKRETAAKTMRSTKPAAQAAPRKAARGAKRERE
                     DSDTANDVEADAALDHPPSKKAKVKGRGYGGRDRKDKKPTSRTTHVSSTNDATNTGGN
                     TAEETISLSIAQPQQAVTPATPVLRRAISSESTGAPSKASSAGTSRKALRINEASETP
                     TSRGADLNTAVDFPDLAPRVPLNDLTEDRRTIRDSDVSGQKSKGSSSGTSSGQRKRAS
                     GKPKEKAPWESRVFDAAEHLAKRERTSEVNSMTSSPMKSVEAKRAPVAENESDEEITA
                     ISPPKVQSKARFSGDPISSSPHISILVCFQDVTPPSFLHALDRLIHFSTKL"
     gene            complement(11810..12620)
                     /locus_tag="CALCODRAFT_504144"
     mRNA            complement(join(11810..12058,12107..12422,12476..12620))
                     /locus_tag="CALCODRAFT_504144"
                     /product="hypothetical protein"
     CDS             complement(join(12147..12422,12476..12598))
                     /locus_tag="CALCODRAFT_504144"
                     /note="expressed protein"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50928.1"
                     /db_xref="JGIDB:Calco1_504144"
                     /translation="MALRELNRAIVALSKSGADKKEKQKATAFSKSLQAAVTKALNDT
                     TQDSINAVQSLMGKHAPDIYAKIGLPMFKVAAELINEVWKNRLYPCLDKAEGSEKVRK
                     EKEMWEKLLDEGVIAGLQVDLLEAAYMRIC"
     gene            complement(12705..13618)
                     /locus_tag="CALCODRAFT_504147"
     mRNA            complement(join(12705..13148,13199..13618))
                     /locus_tag="CALCODRAFT_504147"
                     /product="hypothetical protein"
     CDS             complement(join(13046..13148,13199..13539))
                     /locus_tag="CALCODRAFT_504147"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50929.1"
                     /db_xref="JGIDB:Calco1_504147"
                     /translation="MSLAVPNATSPDTSVPPSPNTLASRLSEYDLPPPSALGGPTPSP
                     GAQSESIADRLSKLNLPPPEAIGKAEKTGRARRNTDDVTEEIAKMDFGIPEGVRLGRH
                     PSMGKRRGEKRESDLPHTTLQVDDKLLPLPESEPSPLTPTTPTQN"
     gene            complement(13769..14819)
                     /locus_tag="CALCODRAFT_461092"
     mRNA            complement(join(13769..14108,14167..14374,14426..14559,
                     14621..14819))
                     /locus_tag="CALCODRAFT_461092"
                     /product="hypothetical protein"
     CDS             complement(join(13843..14108,14167..14374,14426..14559,
                     14621..14696))
                     /locus_tag="CALCODRAFT_461092"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50930.1"
                     /db_xref="InterPro:IPR005269"
                     /db_xref="JGIDB:Calco1_461092"
                     /translation="MSKLAVCVFCASSLGTRPAYLAAASSLGKAIAASGRKLVYGGGM
                     KGLMGATAHACVEAGGRVVGVIPYAMVASGGEGYGTIPGWDGGGMEVVIAKSMHERKQ
                     TMAARAEAGFIALPGGFGTFEEVLEMITWTQLGIHRKPVVLLNIFNFYSPLRQMIRDA
                     VDSGFIPPENIALAVFVDCPEGIDPGDFDWGKAGLQALDDWKSVKGPRNFDWTLERKA
                     ETVGQKLEG"
     gene            18607..19719
                     /locus_tag="CALCODRAFT_161477"
     mRNA            join(18607..18778,18844..18859,18920..18929,18989..19144,
                     19204..19317,19370..19411,19460..19719)
                     /locus_tag="CALCODRAFT_161477"
                     /product="cyclophilin"
     CDS             join(18855..18859,18920..18929,18989..19144,19204..19317,
                     19370..19411,19460..19624)
                     /locus_tag="CALCODRAFT_161477"
                     /note="GO_function: GO:3755 - peptidyl-prolyl cis-trans
                     isomerase activity;
                     GO_process: GO:6457 - protein folding"
                     /codon_start=1
                     /product="cyclophilin"
                     /protein_id="KZT50931.1"
                     /db_xref="InterPro:IPR002130"
                     /db_xref="JGIDB:Calco1_161477"
                     /translation="MSNVFFDIAIGSKPAGRVVFKLYDDVVPLTARNFRELCTGQNGF
                     GYKNTKFHRVIPNFMLQGGDFTRGDGRGGYSIYGEKFKDENFQLKHTKPGLLSMANSG
                     KNTNGSQFFITTVPTSWLDGKHVVFGEVIQGLDIVRAVEAQGSDSGTTKTTITITNSG
                     VVE"
     gene            20675..22182
                     /locus_tag="CALCODRAFT_504151"
     mRNA            join(20675..20854,21082..21169,21223..21495,21547..22182)
                     /locus_tag="CALCODRAFT_504151"
                     /product="TATA-box binding protein"
     CDS             join(20730..20854,21082..21169,21223..21495,21547..21705)
                     /locus_tag="CALCODRAFT_504151"
                     /note="GO_component: GO:5634; transcription factor TFIID
                     complex - nucleus [PMID 5669];
                     GO_function: GO:3677; RNA polymerase II transcription
                     factor activity - DNA binding [PMID 3702];
                     GO_process: GO:6355; transcription initiation from RNA
                     polymerase II promoter - regulation of transcription,
                     DNA-dependent [PMID 6367]"
                     /codon_start=1
                     /product="TATA-box binding protein"
                     /protein_id="KZT50932.1"
                     /db_xref="InterPro:IPR000814"
                     /db_xref="JGIDB:Calco1_504151"
                     /translation="MQSMPVQQLTPPATEGAKTPAAPLTLEQQHITAVDGIVPTLQNI
                     VATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKS
                     EDDSRLASRKYARIVQKLGFDTRFVDFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYE
                     PELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLQEFKKP"
     gene            <22763..>24531
                     /locus_tag="CALCODRAFT_488317"
     mRNA            join(<22763..22843,22895..22995,23047..23556,23605..23749,
                     23803..23974,24025..24211,24261..>24531)
                     /locus_tag="CALCODRAFT_488317"
                     /product="hypothetical protein"
     CDS             join(22763..22843,22895..22995,23047..23556,23605..23749,
                     23803..23974,24025..24211,24261..24531)
                     /locus_tag="CALCODRAFT_488317"
                     /note="expressed protein"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50933.1"
                     /db_xref="JGIDB:Calco1_488317"
                     /translation="MDRIKEMVAETEGFFMRDWSLHLGWNNMRYIIESGVNQAYILNR
                     TLVLPTYVYARNCELEREVCAAYGGVIDRTTWGVTSHLPAGETASFRMPLGVMLDLDV
                     LRAHRNVILMSEYLALQGLPATLEPVTGKFSSELVPEGVTLQTLDAWYYDGDMARVDR
                     APAPYQNDKRWTYDPEMAEKLKAYTHNGIFMQWDNGWKAVSEGQGPGFTQQDAEEVLG
                     LYGYSVIYSYTGQRVEHLKFVGFPVKFICMTNRIHGWYDDWSPSVANVLWLQGEIHVN
                     RRPSDMWFSTPQARDEYSEFVLYTMRRPENILRIAHRVDLRMRKIVGGRMWMAAHMRR
                     GDFTTVDWVRVGSIEEQWNRVHGRLNEGRQVLQNIWHKSKQTYEVPGAQPYEGWQGAL
                     PPAHTDPFFLATDERDPENIAFLRNQSAILINDLLTPEDRQELGWPIMMTDFLGLLEQ
                     AILARSAYFVGRMESSVSGGALNMRAAWGMDPRTMNFE"
     gene            <28774..>29231
                     /locus_tag="CALCODRAFT_443848"
     mRNA            join(<28774..28972,29029..29096,29145..>29231)
                     /locus_tag="CALCODRAFT_443848"
                     /product="hypothetical protein"
     CDS             join(<28774..28972,29029..29096,29145..29231)
                     /locus_tag="CALCODRAFT_443848"
                     /note="GM16173 protein;
                     GO_function: GO:3677 - DNA binding"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KZT50934.1"
                     /db_xref="InterPro:IPR007125"
                     /db_xref="JGIDB:Calco1_443848"
                     /translation="TGGAKKAHRFRPGTVALREIRRYQKSTELLIRKMPFQRLVREIA
                     QEFKTDLRFQSSAVMALQEAAEEYLVGLFEDTNLCAIHAKRVTIQPKDLLLARRIRGE
                     KQDDIKRPERPSQWK"
     gene            29768..31193
                     /locus_tag="CALCODRAFT_504155"
     mRNA            join(29768..30422,30475..30759,30811..30911,30965..31193)
                     /locus_tag="CALCODRAFT_504155"
                     /product="polysaccharide lyase family 14 protein"
     CDS             join(29858..30422,30475..30759,30811..30911,30965..31054)
                     /locus_tag="CALCODRAFT_504155"
                     /codon_start=1
                     /product="polysaccharide lyase family 14 protein"
                     /protein_id="KZT50935.1"
                     /db_xref="JGIDB:Calco1_504155"
                     /translation="MWPWDPPHGAPSRTRFYICVGLTALVTLSFTFFHPWSHLSIADM
                     STYESASAFLRGVKSPAFLARSLFPVQPFVSAWSTSVPFANATGGISFFELSDENLRS
                     TKIASSTLRHTLVSAPPGLSKDEHAFRADYPKGSINPQGLVKGGFSFYAPGPMQSELE
                     GAKEVIFSYAVMFQDGFQFRKGGKLPGLYGGTSPETAYACSGGRTSSRSECFDLRLMW
                     RSAGAGELYAYLPPAPHNEHLCHEGFQSECDWYGVSIGRGNWYFEPGQWTIVSERVRL
                     NDVGEGNGEVQVFINGESVIHSTGIIICKTGECVFRGVHMQTFFGGSSSAWASPQDQS
                     AYFSAFSMSIIE"
     gene            31303..33488
                     /locus_tag="CALCODRAFT_504156"
     mRNA            join(31303..31448,31497..31865,31917..31961,32011..32348,
                     32399..32794,32843..33021,33070..33208,33269..33488)
                     /locus_tag="CALCODRAFT_504156"
                     /product="DNA polymerase alpha, subunit B"
     CDS             join(31367..31448,31497..31865,31917..31961,32011..32348,
                     32399..32794,32843..33021,33070..33208,33269..33436)
                     /locus_tag="CALCODRAFT_504156"
                     /note="GO_component: GO:5634 - nucleus;
                     GO_function: GO:3677; DNA-directed DNA polymerase activity
                     - DNA binding [PMID 3887];
                     GO_process: GO:6260 - DNA replication"
                     /codon_start=1
                     /product="DNA polymerase alpha, subunit B"
                     /protein_id="KZT50936.1"
                     /db_xref="InterPro:IPR007185"
                     /db_xref="InterPro:IPR013627"
                     /db_xref="JGIDB:Calco1_504156"
                     /translation="MDERTLRKDLAAQFGADVKDHNDVMQECVTLCNLFRMSADDLFI
                     AWESFDSSNSNSLSSSTSSVRAKTGRTQITISALRDLKAHIHRERERKAEEEGHHRPN
                     AAAARRSLGGRVGKTGLGTMGAPPPERAREPPVAVRPRVEVREVGEGQRHYRYMYGKI
                     SQRAEILDDIIDDMSEFVRAHYGLEELGDPASVTDEEVVVVGRVCSDADTGAKLTESS
                     LLLESSRIGGSGMRTPLKFEPGFSVRGRNENGFGLFPGQIVALRGKNGGGGWFSASEA
                     LELPGLPEPPLPPTSSSSTSFNAVIACGPFTPDGDLLYAPLEQLLAEVSRSKPGVLLL
                     LGPFIDSNHPLIRKGDVDHTPLEIFQRRIAAPLRGCLQANPGMSLVIVPGVRDLVSFH
                     AAFPQAALSETEDLQLPKAAIHLSNPCTMTMNGVTLSATSVDVLFHLRKEEFIKRVDV
                     ASTPLDPMASLAAHVLSQRSFYPIFPPSKDGSSDVNLDVLHYDLIRLGPAAPAILVLP
                     SLLKQFHKVVNDTMVINPSFLSRGHYAWLECPDATFAQATGGKTAWEVFWKNATVDLR
                     RLPTQ"
     gene            33648..35279
                     /locus_tag="CALCODRAFT_161676"
     mRNA            join(33648..33714,33763..33834,33899..33963,34015..34333,
                     34384..34473,34523..34700,34749..34819,34869..35043,
                     35093..35279)
                     /locus_tag="CALCODRAFT_161676"
                     /product="Rad1-domain-containing protein"
     CDS             join(33827..33834,33899..33963,34015..34333,34384..34473,
                     34523..34700,34749..34819,34869..35043,35093..35119)
                     /locus_tag="CALCODRAFT_161676"
                     /note="GO_component: GO:5634 - nucleus;
                     GO_function: GO:3684; exonuclease activity - damaged DNA
                     binding [PMID 4527];
                     GO_process: GO:6281 - DNA repair"
                     /codon_start=1
                     /product="Rad1-domain-containing protein"
                     /protein_id="KZT50937.1"
                     /db_xref="InterPro:IPR003021"
                     /db_xref="JGIDB:Calco1_161676"
                     /translation="MSIATIAVSEAGLMVTVEYKQVLLASAYLYAQMFNEFTYNKPDP
                     IDGESEADLSPVFEIKLSLLMSALDVFGGAGLGAIAVADNDKGSKGRGRRDDWDANGL
                     DRGDTDDRKKATAMRLTWIGKGHPLSLHLADAPNVSTVCELITSDPEPTMDLPFDSDE
                     VAAKIIMKSSWLRDALSEIDPKSDKLTIICTPPEAQGGRRNGQPKPTFRLKASGDLAA
                     TEMKYPDAKEVLEVADFGTEETVSFTYRFEHIAKCIPALRSSVKTSLRIDFEGVLSLQ
                     FMIPFRRHRPEKDAAATPSENYIEFRCAALLEDV"
     gene            complement(35354..36503)
                     /locus_tag="CALCODRAFT_461119"
     mRNA            complement(join(35354..36042,36092..36154,36206..36348,
                     36404..36503))
                     /locus_tag="CALCODRAFT_461119"
                     /product="single hybrid motif-containing protein"
     CDS             complement(join(35440..36042,36092..36154,36206..36348,
                     36404..36437))
                     /locus_tag="CALCODRAFT_461119"
                     /note="GO_function: GO:5515; acyltransferase activity -
                     protein binding [PMID 8415];
                     GO_process: GO:8152 - metabolic process"
                     /codon_start=1
                     /product="single hybrid motif-containing protein"
                     /protein_id="KZT50938.1"
                     /db_xref="InterPro:IPR000089"
                     /db_xref="InterPro:IPR004167"
                     /db_xref="JGIDB:Calco1_461119"
                     /translation="MSLARVLLRSRALHTSVRRLAITELEMPAMSPTMTEGGIAAWKV
                     KDGAHFAAGDVLLEIETDKATMDVEAQDDGVMGKIIMPDGSKNVQVGKVIALLAEEGD
                     DISNLEAPKESSALKPAPPKEEPKPTEKQPTDSGASPSPASGSPPSTPQPLHNHPYEI
                     ETSHPLFPSVHRLLEENNIHDASKIKGTGIRGMLTKGDVLAYLGLASNPYGTFQEEAK
                     AEGIENTPVKQAEAKKEGKPEVAPLDGPAWRAALAQGLANLGKPPVAPVHRECTVLQP
                     ATPC"
     gene            complement(36787..36868)
                     /locus_tag="CALCODRAFT_t59"
     tRNA            complement(36787..36868)
                     /locus_tag="CALCODRAFT_t59"
                     /product="tRNA-Leu"
                     /note="Anticodon: TAA"
                     /anticodon=(pos:complement(36832..36834),aa:Leu,seq:taa)
     gene            complement(37227..38984)
                     /locus_tag="CALCODRAFT_477799"
     mRNA            complement(join(37227..37559,37616..37978,38034..38553,
                     38612..38722,38775..38984))
                     /locus_tag="CALCODRAFT_477799"
                     /product="Dolichyl-diphosphooligosaccharide-protein
                     glycosyltransferase 48kDa subunit"
     CDS             complement(join(37370..37559,37616..37978,38034..38553,
                     38612..38722,38775..38928))
                     /locus_tag="CALCODRAFT_477799"
                     /note="GO_component: GO:5789 - endoplasmic reticulum
                     membrane;
                     GO_function: GO:4579 -
                     dolichyl-diphosphooligosaccharide-protein glycotransferase
                     activity;
                     GO_process: GO:18279 - protein amino acid N-linked
                     glycosylation via asparagine"
                     /codon_start=1
                     /product="Dolichyl-diphosphooligosaccharide-protein
                     glycosyltransferase 48kDa subunit"
                     /protein_id="KZT50939.1"
                     /db_xref="InterPro:IPR005013"
                     /db_xref="JGIDB:Calco1_477799"
                     /translation="MQPSLFSWLGIALTMLVAPTWAKSSSGDKVLVVTDAKLEMTDYS
                     QFWDGLRSRGYDLTFRKTSEDAPATSVFDVPSFSHIIVLAPSAKTYPKDLSPQSLVHL
                     LSDSKQPTNILFVLQPSTPSSPLRDLGREFGISFPPPATPLIDYFNAVSPSNATSLLL
                     SPPLSPHTAGFEGGKILYSGVSHLRSSNPLLVDFLNAPATSYAADPSEPADAIMEAAA
                     SGGEGLWAGGRMGLVTGFEVLLGGGRAMWVGSLELFKDAAASVDGEATANNAYALALA
                     AWTFQETSVLRIDAVEHRRISETSPREQYRIKDDVIYRIHVSKFDATIGEWVPTSEID
                     DMQLEFTMLDPHIRTALKPSSAEGWYEAEFKAPDRHGVFKFIVDWRRKGYTPLHSSTT
                     VSVVPFRHNEYPRFLSSAWPYYLGALSTSAAFVLFCSLWLLGGDEEAKKKKTQ"
CONTIG      join(LKHQ01000651.1:1..39421)
//