LOCUS KQ979685 1420365 bp DNA linear CON 25-MAR-2016 DEFINITION Trachymyrmex cornetzi isolate Tcor2-1 chromosome Unknown scaffold245, whole genome shotgun sequence. ACCESSION KQ979685 LKEY01000000 VERSION KQ979685.1 DBLINK BioProject: PRJNA292627 BioSample: SAMN03982882 KEYWORDS WGS. SOURCE Trachymyrmex cornetzi ORGANISM Trachymyrmex cornetzi Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Trachymyrmex. REFERENCE 1 (bases 1 to 1420365) AUTHORS Nygaard,S., Hu,H., Boomsma,J. and Zhang,G. TITLE Trachymyrmex cornetzi WGS genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 1420365) AUTHORS Nygaard,S., Hu,H., Boomsma,J. and Zhang,G. TITLE Direct Submission JOURNAL Submitted (29-SEP-2015) China National Genebank, BGI, Beishan Industrial Zone Building No. 11, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Date :: FEB-2012 Assembly Method :: SOAPdenovo v. 2.04 Assembly Name :: Tcor1.0 Genome Coverage :: 109.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1420365 /organism="Trachymyrmex cornetzi" /mol_type="genomic DNA" /submitter_seqid="scaffold245" /isolate="Tcor2-1" /isolation_source="Nest" /db_xref="taxon:471704" /chromosome="Unknown" /tissue_type="Whole body" /geo_loc_name="Panama: Gamboa" /collection_date="2011" gene complement(<1319..>107778) /locus_tag="ALC57_07815" mRNA complement(join(<1319..1659,4710..4981,5800..5970, 14103..14370,14594..14683,15355..15841,26315..26637, 31502..31525,31619..31849,32705..33147,36768..36813, 37518..37748,38174..38513,38622..38778,46984..47221, 47519..47909,48242..48565,49485..49635,69703..70039, 70232..70918,107481..>107778)) /locus_tag="ALC57_07815" /product="Putative odorant receptor 22c" CDS complement(join(1319..1659,4710..4981,5800..5970, 14103..14370,14594..14683,15355..15841,26315..26637, 31502..31525,31619..31849,32705..33147,36768..36813, 37518..37748,38174..38513,38622..38778,46984..47221, 47519..47909,48242..48565,49485..49635,69703..70039, 70232..70918,107481..107778)) /locus_tag="ALC57_07815" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004984 - olfactory receptor activity [Evidence IEA]; GO_function: GO:0005549 - odorant binding [Evidence IEA]; GO_process: GO:0007608 - sensory perception of smell [Evidence IEA]" /codon_start=1 /product="Putative odorant receptor 22c" /protein_id="KYN19770.1" /db_xref="InterPro:IPR004117" /db_xref="UniProtKB/Swiss-Prot:P81911" /translation="MQLIISLKLNDNIAAIKHVVLILTMLVQLYLYCYAGDQLENVTG RIAYSAYDSPWYDFDVKIMKDLPMVMLRGKLPHQTTAGKFLPMNLFSFKEILKATEMI RHCNGHEDAMDAFLLSSSSIISLVKLLLHRVYWRQKSILVESVIHDWTYVKNSRFRDI MLKYARIGRLGSSIFFCLGCASVVSFVSSVVLANINLPWTSEKHIYNETNEKKLMLAA YCTFGKYYTSFFTYCAVEVLQFVQILVNGISQCGNDGFFFDLTMHMCGQFAILRMNFN TLGCDEFSCCSKLDILLKRHYRLVYLSHYLERAFTLVILAQILMSVVVLCVEGFLLLL SLEINDVLTAAKHGVFIISLLVQLFLYCFAGQTLEFQSKKLAYAIYESPWYTFDVNVM KNLPLIILRAASPQQLTAGKFVAINFMTFKEILKASASYLSVLRVMIKTTSPGMKTNW NSGMDYGFSMIRTVMWIVGVWPLHQDDIICTFRWIIIFIEQSLAMICLLIELFINCGD TKDALEVFLVMEAHLHSWINIVFARIYMKKIAVNVTSAIDDWSTSSIEKQSYLIMTGY ARIGRIITMSQLMIGFIAAVVYFPTIFFGNRQQVVIIGNNTEALWNFAIPSTCLFRGV SYSIYKALFLIQVLQAFILYTAECSSDCFFFVITMHLCGQLKLLRIRFIELFGKSSNE RNHYRNILGSWIRRHYKLIILAKNIEDTFNLNVLLRLSITTIFIAVSGTRVIMSIKNH DYANVAKSMVFVQFYIVQSFLFTHAGETLRKQSESIVLAIYSTTWHKLPPSVVKDFIF IMMRTKIPLQLYYLNPMASERWKDDVAYAITPFKLVAWSIGIWPLQVRNAYSLIRYVF GIFSAVLLIVIPCFEIYLGCTDAETSIDCLMLIFCGILGVLKIIWFRIYAKNLANNYS SAMKDYLTIENTKERAIMRKHAFMGRTLCCLILGFAYFSSIMYGLIAILDEYKHVNIT NEGNDALFLNITLHVCGQVKILRANFLNFDIRSPHIYNRFNVLIERHKYLIKLARQLA EMISFVLLIELFLISILLCIMVEKSSPFCNFRNIFFYFEVYLGCTDAETSVDCLMLIC CAILGVLKAIWFRIYAKNLATNYRSVMDDYLTIENIKERAIMRKHAFMGRTLCCLVLG FGCFSSIMYGLNAILNGYKHVNITKDTMLEYPVPSKCFMKYLNVPVRMHKIFCIIDVI ALILASIANQGNDALFLNATLHICGQMKILRANFLNFDIKDLHIYDRFNVLIERHKYL IKLARELAEMISFVLLIELFIISILLCIMGFQLILQLGFQFILALKDNDTAMAAKSIM VQSTFLSQLMLYSFVGDYLKSQMEEVGLCIYQNTWYDFPAKLTRNLIFVIMRSESPVT LRAGHFIVVNLSTYMSILKASITYLSVLRSTIVILPSMEFHMGCTNTEQNIDSLMLAC CGLLGVFKIICFRIYAKNLTDNYSSARNDYLTIKNAEYRAIMRKHAFMGRILSCFMVC FAYISVVIYSLIPLLGEDLVDDQDIQINRTNEDIVLDYPMPSRCALEYLHVPRSMYEF ICIFEFIVLILTSTCNHGNDSLFLNITLHLCGQVKILKADFVNFVVSRFQFILALKAH NVVVIGKSALVLCTSLTQLSIYSFVGDHLKSQMEEIGLFIYQSSWYDFPTKLARNLIF IIMRTRSPAKLLAGNFVVVNLYSYYVLMASERWKNDIAYAMTPFKLLTWPLGIWPLQV YNIYSLIRCVLVTCCMVLSHIIVILPSMEFHMGCTNTEQNIDGLMLACCGVLGVLKTI CFRIYAKNLTNNYSSARNDYLTIKNTEYRAIMRKHAFIGRILSCFMVCFSYISFQFIL ALKTHNVVVMGKSVMVLCTFLTQLSIYSFVGDHLKSQMEEVGFFIYQSNWFDLPTKLA RNLIFIIMRTRSPAKLLAGNFIVVNLATYMSILKTSISYLSVLRVMIET" assembly_gap 2474..4200 /estimated_length=1727 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8427..8640 /estimated_length=214 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9335..10001 /estimated_length=667 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10289..10367 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10735..10784 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11100..11395 /estimated_length=296 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 43607..43622 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <51178..>51348 /locus_tag="ALC57_07816" mRNA <51178..>51348 /locus_tag="ALC57_07816" /product="Cytochrome c oxidase subunit 1" CDS <51178..51348 /locus_tag="ALC57_07816" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO_function: GO:0005506 - iron ion binding [Evidence IEA]; GO_function: GO:0009055 - electron carrier activity [Evidence IEA]; GO_function: GO:0020037 - heme binding [Evidence IEA]; GO_process: GO:0009060 - aerobic respiration [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Cytochrome c oxidase subunit 1" /protein_id="KYN19771.1" /db_xref="InterPro:IPR000883" /db_xref="InterPro:IPR023616" /db_xref="UniProtKB/Swiss-Prot:Q37705" /translation="PLISNIFHRGPSIDLTIIFSLHITGISSIIGAINFISTILNIHK KIISIDKILLLV" assembly_gap 60317..60455 /estimated_length=139 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <71499..>71936 /locus_tag="ALC57_07817" mRNA join(<71499..71588,71838..>71936) /locus_tag="ALC57_07817" /product="hypothetical protein" CDS join(<71499..71588,71838..71936) /locus_tag="ALC57_07817" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19772.1" /translation="VLSGALVELLGSCSKKSSISAANKCLRDWFILFQYLWYNPLPPS PRGGTLDAEKLDKTSTWS" assembly_gap 72572..73042 /estimated_length=471 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 74956..74978 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 78394..78568 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <92383..>94522 /locus_tag="ALC57_07818" mRNA join(<92383..92523,92692..93046,93628..93996, 94182..>94522) /locus_tag="ALC57_07818" /product="Putative odorant receptor 10a" CDS join(92383..92523,92692..93046,93628..93996,94182..94522) /locus_tag="ALC57_07818" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004984 - olfactory receptor activity [Evidence IEA]; GO_function: GO:0005549 - odorant binding [Evidence IEA]; GO_process: GO:0007608 - sensory perception of smell [Evidence IEA]" /codon_start=1 /product="Putative odorant receptor 10a" /protein_id="KYN19773.1" /db_xref="InterPro:IPR004117" /db_xref="UniProtKB/Swiss-Prot:Q9VYZ1" /translation="MTDKRWNDDIAYVFSIHRLFLKGYGLWPLQKQTVFTKIQWGFCL IAQLMILPCLTTEILWSNQDANSNIESITFFASTSTGLTKNLCLIVSQKRLSMNINAA INDWLSVKDNIETRKIMKKYAVQGKILTFTLLYSLYVCLGTYIAVVIFINLKQIFFTD LNLMNVNTTNWLLLIPSGPLSHLITGPQYTIILTIQIVQSCVLSFLLFTVDSFFFNVT IHLTGQLEVLKNNFKTFRNEPNTEANYRKKFVSLINRHSLLIELYQNLEDTFHFLILY QVVILTILLTLTGLHLNICINEKNHVDATKSVFVLNYLIMQSLIYTYGSEFLQKESED IFYTLYTTSWFMLPSALMKDLHFVMMRSSIPFRLTGGKFFYVNRETMLYVLKTAVSYV SVLRRALRN" assembly_gap 95958..97714 /estimated_length=1757 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 99289..100416 /estimated_length=1128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 100675..101136 /estimated_length=462 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 103184..103895 /estimated_length=712 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <128555..>132969 /locus_tag="ALC57_07819" mRNA join(<128555..128598,128864..129047,129555..129955, 131041..131352,131437..131638,132547..132780, 132889..>132969) /locus_tag="ALC57_07819" /product="hypothetical protein" CDS join(<128555..128598,128864..129047,129555..129955, 131041..131352,131437..131638,132547..132780, 132889..132969) /locus_tag="ALC57_07819" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19774.1" /translation="KKQRYPSGYDPKRFRNGRMWLSRTSLLLVLIGLASSEKNNEDDA SNIFIEEAKNLFSQQSLEDMAHKFAHSDAGKQVRDMMFEKKSDTADGISQIISGLSNL MSGGQNNHLSMMGSFLDLLNAGSNKRSARDTEHKEESGIDWGNIISMGSMFLQQNANN DVTLGLLPMLLDSLGHGMKDNDAGNKDHSGHSWFLPPILENIHIMWEHFSNSELGQML WKNSGLSTVIAHMRDEKGDILWEKILDSFESPSIRRRWVKSLTNFVAEWISHISEPIN QQRYLTTAQFVGNSFLKSQGFPKTMMFDASKPVESFSRLINGLTKRYLNVKFDSSQYV RPAIAYFQELVSLASEKGFIMSRINARELSNKLSDIINNDIIGPVLKSYRAYKWATKV PQCASQILCTINEKSQQREDGGKEVSVRVRSALLRVASFPAAWAVSNKLGINFWSLYG AIMEHEGCISKYPADCTAFHEEEIRVTTENIHSEL" gene complement(<134719..>137410) /locus_tag="ALC57_07820" mRNA complement(join(<134719..134760,135009..135245, 136020..136151,136293..136421,137408..>137410)) /locus_tag="ALC57_07820" /product="ADP-ribosylation factor-like protein 3" CDS complement(join(134719..134760,135009..135245, 136020..136151,136293..136421,137408..137410)) /locus_tag="ALC57_07820" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]" /codon_start=1 /product="ADP-ribosylation factor-like protein 3" /protein_id="KYN19775.1" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006687" /db_xref="InterPro:IPR006689" /db_xref="InterPro:IPR024156" /db_xref="UniProtKB/Swiss-Prot:B5FYQ0" /translation="MGLLAILRKLRSNPDKELRLLLLGLDNAGKTTILKSLASEDITQ VTPTQGFNIKSVQSEGFKLNVWDIGGARKIRPYWRNYFENTDVLIYVVDSADIKRLEE TGQELSELLLEEKLRGVPLLVYANKQDLGHAVTAAEIAEGLGLHNIKDRDWQIQSCIA IEGKGVKEGLEWACKNIKRK" gene <137948..>139387 /locus_tag="ALC57_07821" mRNA join(<137948..138174,138272..138462,138542..138671, 138749..138875,138945..139119,139212..>139387) /locus_tag="ALC57_07821" /product="E3 ubiquitin-protein ligase HERC2" CDS join(137948..138174,138272..138462,138542..138671, 138749..138875,138945..139119,139212..139387) /locus_tag="ALC57_07821" /codon_start=1 /product="E3 ubiquitin-protein ligase HERC2" /protein_id="KYN19776.1" /db_xref="InterPro:IPR000408" /db_xref="InterPro:IPR009091" /db_xref="UniProtKB/Swiss-Prot:O95714" /translation="MPVYYTGLNASPLFFNQDGIIISISQLTQIPFPEITDIEIGWNY FLLWQNTKLYITGKISEEDEKNRPRLMQIPEDCKLAIPRRDNVVVLSTRNEIWKYKIY DDTWQKVTPFIPSNDNTQVEHAIKLSQAGCTVILTNLGRVFNAPLLVEIPKRVKFVDL ACGFDHTILLAENGDVYSMGMGIRGQLGHNELENCDNPKLIEALAGLKVVQISAGGWH TAVVTDQGDLYTWGWNSNGELGIENKDKKVYAVPTLVDFKNDREENIEINVKKVECGN SFTICLTDDGSFWGCGTNKYGQLGKLQRNLENPYNFVKLDIYFSLESETVKKFKCHEW GTAIITE" gene complement(<139456..>141633) /locus_tag="ALC57_07822" mRNA complement(join(<139456..139637,139877..140055, 140443..140459,140967..141105,141188..141291, 141550..>141633)) /locus_tag="ALC57_07822" /product="hypothetical protein" CDS complement(join(139456..139637,139877..140055, 140443..140459,140967..141105,141188..141291, 141550..141633)) /locus_tag="ALC57_07822" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19777.1" /translation="MKSSNILDSENNSEFEEEHNEFVHKENEILKKIIYMPTLPSTFN SLVKKTVKLKTDEPRCVIELVGDLLGVKDYGISKAAFWFLDIVAFQVLRYKNCLDDHY RSILISWYNNGNRYVNELRYAVFVNPIQMQMFLMPYAYQIQHQIKLAHSRGSFNIQLR ERLEEVARESIINNGKKITDDMRKDQMIEDFEILPIPPSLLNEEEILANNCRFILPLI EANKAAQIFEMHAGSM" gene <163038..>225306 /locus_tag="ALC57_07823" mRNA join(<163038..163145,163269..163364,224122..224155, 225002..>225306) /locus_tag="ALC57_07823" /product="hypothetical protein" CDS join(<163038..163145,163269..163364,224122..224155, 225002..225306) /locus_tag="ALC57_07823" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19778.1" /translation="ARKRNIKRKYTISRRARSFPAVASCTRGYSRQSRYEYVCPPSDV ETTAAIRPVEHNSVDTPFLFFSSLMRISSLLNGRRGTSSEYLQRHSIAGTGHWCNLLP KAEPSGHADKNHVRDDIESRRPGEQRSRKSRIDSSRWKIYSGPRSDRIRDIRRMIRSS RAIAGSQTASVRHFRCLKPD" gene complement(<172286..>190583) /locus_tag="ALC57_07824" mRNA complement(join(<172286..173471,173665..174652, 175820..176057,179810..180239,187622..187701, 188168..188407,189141..189449,189783..>190583)) /locus_tag="ALC57_07824" /product="Mushroom body large-type Kenyon cell-specific protein 1" CDS complement(join(172286..173471,173665..174652, 175820..176057,179810..180239,187622..187701, 188168..188407,189141..189449,189783..190583)) /locus_tag="ALC57_07824" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Mushroom body large-type Kenyon cell-specific protein 1" /protein_id="KYN19779.1" /db_xref="InterPro:IPR007889" /db_xref="InterPro:IPR009057" /db_xref="UniProtKB/Swiss-Prot:Q95YM8" /translation="MGRRRWKQYQDTLYSGTRSSESQPHHRLYPALSSSCNPIPGSLD QIGPQLHHPAPTSLSSTVLTTATTTTTTTTTTLATGVVKQESLQRHHLQNHHHLPAPV QDHLQQQQQEDSRRLRPGEVKIEAADEELTDAGAAREDTSTRTTDTATSTTVTTTAEV ATTTATATATTIGIATTTSTTTTATGTTTIATRRRRGRRQNDGEDVDGEEDGEENDEE TGRGQNEAEKRLKLDEDADRSAVSPLRTENDRATRDHPTANATDTEGTKERTEEIALE RAPVTQGLLRVKKEEELQEVPGSGGTTILTTPATNSEGTRSGLLCRDGNAAATSVATP FLLGRRTSPPPEDWKPLDKCYFCLDGKLTHDDQPPLSPQSDSSSSSRSAESPMSVQVD PMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQTHQDSAAAADQPLDLSAKPRNSQ DNNISLLEQQKIPLRMPTGIDPKTILNSCYRAKPRMTGPVVTAAAAAAAAAAGVGGVP VVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERD ASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTPPNTTQNASATTPPPQVDEVDDK ELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGTGGDSLRNLLQRGHETGAEWPGFDH ANIGPYIQKMLAAAAPLGMDTRDYRIPEVMRKLMSEDKRLNKNVNGDQSQPHHHQHHP LAAHQQSQSQQQQRGPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSNKNG EPTSAAFAQSFAAAASSPGLLERASPAFSSTSSPTNSLVGKAVAVNFRDVIAKSISVK FQEGQTPSAAGIPGCQPAGVVPSQQAMITDPSPFKRGRYTPPQPPQQQQQSSAQQSQS KQQSQEANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVP HSTLEYKVKERHLMRPRKRQVSISCFDKRIIRFISFCFFYPESYKQSILFVDDIMSTL KPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPIL PEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDGVGVSGTADAAGTSNSRSASMAKAP RDMVESIYDGPGANGSFLDNLIRSSLETGIPRDQRGIAEARNQQQQSSSQHPETMSSK TLIDQLCRNSRRTPLPRMAQDSSEDESYRGPTGRMVPERPERVPTVDLSPSPSERGRT EDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLNLQ QQQQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGL VVQLQRGYNTASSRSGEPTNSQQPAAAAAAAEQRGTALSMEDSVE" assembly_gap 173474..173511 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 202468..202517 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 202906..203207 /estimated_length=302 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<212853..>215772) /locus_tag="ALC57_07825" mRNA complement(join(<212853..212983,213614..213673, 213785..213918,214416..214648,214662..214787, 214999..215375,215568..>215772)) /locus_tag="ALC57_07825" /product="hypothetical protein" CDS complement(join(212853..212983,213614..213673, 213785..213918,214416..214648,214662..214787, 214999..215375,215568..215772)) /locus_tag="ALC57_07825" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19780.1" /translation="MEWRSFAMNSRENREGGTGEGGEGGRQATEGGLRGAMAQGWRPP RRKEVRECERRWAERGGQGEWKGRANLPPRGRRTRESAPIATLPRPPLPHPPSLPPPP PAPPPRPLCSCRLTTRESASHPYHPPTTYTADSDALLTGNVSFRAAAVPFLFRDGAGG RPLCFLHAGATESQCGRTSSPRRDVVVDRIDTSKQPVICEHLEVRERLGRVLQRAHGS DRRKRIRRKKREKTFVREAGRKKEGGRAVGWQRDREIKRKREKERVSQDAPPATDCTL VAFRAQACTCVVRFCALTLSRYLGGVAWSSSLRGYIPTGGRGRRVSKKEEEEKEEEVR EDDDEGDNGDDDDEEDGGAPAVEGERRHIRRELLRWTKNMVFVVENTLVVETCCEPKR RILADYVPGVTPTRACTFNRVVPRCRKIR" assembly_gap 214191..214413 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 222450..222874 /estimated_length=425 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 231158..231518 /estimated_length=361 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<263879..>275869) /locus_tag="ALC57_07826" mRNA complement(join(<263879..263995,264079..264452, 272675..272738,274317..274349,275807..>275869)) /locus_tag="ALC57_07826" /product="hypothetical protein" CDS complement(join(263879..263995,264079..264452, 272675..272738,274317..274349,275807..275869)) /locus_tag="ALC57_07826" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19781.1" /translation="MSLVQIRQPVGPGPNILEEASELCEPWPEQRRVASATVITGELT RRDGRRTFFEEGRGVGSVVTSSSGAPSCIVKSSSSNSGDADGDEEGGGSSAGAGGGGG DGGGGGSVEWWWWIAKMMVGWSDGGAGAPSAQAVPSDADAVTGAQRDPTQLDLTSHIR SRIKRRGLGKWSACACVRTESVGSERKRERRGAEERKEGKISQGENSLGPPSERGV" gene <264151..>264716 /locus_tag="ALC57_07827" mRNA join(<264151..264426,264471..>264716) /locus_tag="ALC57_07827" /product="hypothetical protein" CDS join(<264151..264426,264471..264716) /locus_tag="ALC57_07827" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19782.1" /translation="VELRWVALRSRNCIRVGRHGLRAGSASAAIRPPHHHLRYPPPPL DTTTTTTVATTATGTGTTTTTFLIAVGITTITTTTLDDATRCTTTTSHVTLSRPVTIT IIRTSWTSSTTPTTTTTARRDTRDTSVLQCIITVFSIVHAYIVYACARTCTRTRVSPA TKLCTLSPSSTLS" assembly_gap 302306..302628 /estimated_length=323 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 305104..305219 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<321632..>321802) /locus_tag="ALC57_07828" mRNA complement(<321632..>321802) /locus_tag="ALC57_07828" /product="hypothetical protein" CDS complement(321632..321802) /locus_tag="ALC57_07828" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19783.1" /translation="MSCYLCASSMPGGTVREVASPCIFRCKAIHVDEKQSSLSIVSLR LTGDSTHLLGTS" assembly_gap 330408..330529 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 341044..341124 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 353227..353242 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<355559..>391058) /locus_tag="ALC57_07829" mRNA complement(join(<355559..355771,390466..390648, 391023..>391058)) /locus_tag="ALC57_07829" /product="hypothetical protein" CDS complement(join(355559..355771,390466..390648, 391023..391058)) /locus_tag="ALC57_07829" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19784.1" /translation="MNFPSGSYLVPRILLVVSCRLGISLVFLSRRIYTSGRRTASRMQ VEKERRKTGRDEETKRDGEGRKGYVTREPHANSNDTGQSGSCVLEYHIVNRIYARNRF VVCERYLFCTCACPMRWIDRRIEGTDISCDITIEIRLGGAR" gene <360247..>360525 /locus_tag="ALC57_07830" mRNA join(<360247..360366,360394..>360525) /locus_tag="ALC57_07830" /product="hypothetical protein" CDS join(<360247..360366,360394..360525) /locus_tag="ALC57_07830" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19785.1" /translation="KNGEKGIVIEKEDKRRKGKRDREKESEKEGVGALRHFLASAPTI GSWSLLAELTEIGIVAARVSQRLFYSVFSGPTLKFLAIV" assembly_gap 392305..392379 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<403422..>420052) /locus_tag="ALC57_07831" mRNA complement(join(<403422..403679,419981..>420052)) /locus_tag="ALC57_07831" /product="hypothetical protein" CDS complement(join(403422..403679,419981..420052)) /locus_tag="ALC57_07831" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19786.1" /translation="MRSERKVVVCADDDGGAAGAGGWLGSTMHQSVHLSRGKKGERAY WQGEAFSNRLAPVPRILHPLGHALSFIMERNKTSRDEVHNVWITILKRSVVNFIYLRI NDIGQYK" gene <403486..>409756 /locus_tag="ALC57_07832" mRNA join(<403486..403572,405856..405912,408891..409013, 409388..>409756) /locus_tag="ALC57_07832" /product="hypothetical protein" CDS join(403486..403572,405856..405912,408891..409013, 409388..409756) /locus_tag="ALC57_07832" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19787.1" /translation="MVIHTLCTSSRLVLFLSIMNERAWPSGCSYIEIIKKFFRNLLNY DAKDSGEPSYRSIPRRGIDTVTRPRVSRHADTSQNPRNELPPSLSPSPSILDRHSFRL SSSFPILHLPSPSPPPPPPPPPPLLSFISLIRPELKYTTYTHNGLPLLCNGLDNDGHD DDDDDDDERNLNAKRSPTFNSVQFSTAVFRAVAVATRVVSRDVPLKPETIT" gene <412281..>412788 /locus_tag="ALC57_07833" mRNA join(<412281..412474,412488..>412788) /locus_tag="ALC57_07833" /product="hypothetical protein" CDS join(412281..412474,412488..412788) /locus_tag="ALC57_07833" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19788.1" /translation="MISHACGSRTLRSNLMARPLSHRNLRSPTRVRRRNRNASSFPGE IILRKINVHEHAVVTQRVCVAKGERWIGARLQEEKKETFQGAVQRGDITRGGGKGGSA EHRERRRRGGEKVRAKWRQEAREEAAETQVEEAAGEEPRGDTRRGHAWKRGQWERERK RMRG" gene <419634..>443410 /locus_tag="ALC57_07834" mRNA join(<419634..419698,419739..419853,419982..420296, 443219..>443410) /locus_tag="ALC57_07834" /product="hypothetical protein" CDS join(419634..419698,419739..419853,419982..420296, 443219..443410) /locus_tag="ALC57_07834" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19789.1" /translation="MKSVPTRGRPSGRLAGLQGRQSAEESAYDTHRHAFTLVRSQTCL NSFSLSPFPTLLPGPFSQPPAPAAPPSSSAHTTTFLSLLIHLPGPSFSEAPSGTPLTH RHRDLLNPLVRTRRLVVGCTASRTFRLAPLPRLHSSSSSPSLSPLLPSLYHVSTNPPP LPPRARNKRTEAKAGRARLGGDRGRPGKTGEDEEEAEEAVAVEGTKSRRRRTEYTKDG PTGQGKSGKK" gene complement(<420254..>420523) /locus_tag="ALC57_07835" mRNA complement(<420254..>420523) /locus_tag="ALC57_07835" /product="hypothetical protein" CDS complement(420254..420523) /locus_tag="ALC57_07835" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19790.1" /translation="MKNGGSRSWRVEIEGEGESPCVFGPCLSSSFVPKLRLFSWPSFS RFVHPWTQGRAQVRKREREKESDSEESGKKDEARGGRGGGLVETW" assembly_gap 444412..445059 /estimated_length=648 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 490236..490506 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <493495..>493710 /locus_tag="ALC57_07836" mRNA join(<493495..493617,493648..>493710) /locus_tag="ALC57_07836" /product="hypothetical protein" CDS join(493495..493617,493648..493710) /locus_tag="ALC57_07836" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19791.1" /translation="MRGERSGCLVVAAAPRAFHPRAASGIGSMPDHVAKRAKNASREE HEQRQRAQVRGAEKPKT" assembly_gap 496540..496644 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <502258..>506718 /locus_tag="ALC57_07837" mRNA join(<502258..502414,504861..504951,505846..506138, 506228..506475,506602..>506718) /locus_tag="ALC57_07837" /product="Upstream activation factor subunit spp27" CDS join(<502258..502414,504861..504951,505846..506138, 506228..506475,506602..506718) /locus_tag="ALC57_07837" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Upstream activation factor subunit spp27" /protein_id="KYN19792.1" /db_xref="InterPro:IPR003121" /db_xref="InterPro:IPR014876" /db_xref="InterPro:IPR019835" /db_xref="UniProtKB/Swiss-Prot:O74503" /translation="GWMRIGALSALTVPTDATRVRSRRRLSWQQYVQRVASTMADISK EELRKEITAILKDADLTTMSAKKVRQQIEEKLDVDLIERKKEVDDLVMECLQEKQDGG KKKKKAASEESEDGEEEEEEGSEEEEEEEEKKPAKRNPAKKTPNKRKKGSSEDEESAS DDDASDEEYSPKKPKVTPKKSKPGKKGKKKGSDSDSDEDWGKNKKAPGSAAKKGGAGG KGKGGGYTRAITLSPELAAVVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEE LMKVIGVKRFRTFGMMKYLKNHFVD" gene complement(<509362..>513483) /locus_tag="ALC57_07838" mRNA complement(join(<509362..509589,509883..510018, 510105..510203,510263..510411,510547..510614, 510716..510818,510893..511000,511366..511495, 511634..511877,512019..512188,512897..513077, 513145..513307,513391..>513483)) /locus_tag="ALC57_07838" /product="hypothetical protein" CDS complement(join(509362..509589,509883..510018, 510105..510203,510263..510411,510547..510614, 510716..510818,510893..511000,511366..511495, 511634..511877,512019..512188,512897..513077, 513145..513307,513391..513483)) /locus_tag="ALC57_07838" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19793.1" /db_xref="InterPro:IPR021897" /db_xref="UniProtKB/Swiss-Prot:Q29RL1" /translation="MESVRKELTKRIVNECKAKGTSITKDLASFLLSLYQLNPVYRIK ENDEENAKVIPAVTERLCDQSRPSLVTLKNQLYFAKHYHDRDETVKRHRLRLHQKTAP LVAEICETNKLESGKDTEKLYQKILAVITLLSGLGSPTVPSVLREVSVALQSVFQASE LTHYVTLPKREKEEQLMELMCLVAGIRLFNRDCQRGGEGIDDLPSILQEALMKTRNSI LELLEPLMAKIYKFTAVVENAVTCMSIDVSDAACCSSKEAASDAEEKIEWFIEMLTAS RQQEIYIRKLLSDVERSENAVKDLMERLQARFFKLHDTVRYRTAIPTTQVYPQFIDLA DIWMGLQDEVITLSNINNFLWELQGLSNKTVNIYDQTKLENIAENVEILTDAERLERT MGNLITECGECLIYYPNVTKDFEKINLEFLGFCAWTFATGRGALIPGNPNNGVAKWRG KHYAFKSPEVADKFGKNPDRYVYDALNFVRNHAEYIHLFQLHEEIEAMQSQEELTEKG LRLKTRHDQKVQTDVHILPPYIDKYYTSSVWELKRRALRLANISRCTTRSTQTFNSHF RYGVYVQAAPPQDKEVQTRRDNCTNTKKLLTFIYGLRGRRDDNQHVVSFLENELEHL" gene <514586..>548658 /locus_tag="ALC57_07839" mRNA join(<514586..514654,525768..525875,527234..527273, 527469..527645,528818..528860,529257..529321, 536333..536340,537378..537455,538388..538465, 538505..538600,547293..547358,547467..547623, 548483..548538,548566..>548658) /locus_tag="ALC57_07839" /product="hypothetical protein" CDS join(514586..514654,525768..525875,527234..527273, 527469..527645,528818..528860,529257..529321, 536333..536340,537378..537455,538388..538465, 538505..538600,547293..547358,547467..547623, 548483..548538,548566..548658) /locus_tag="ALC57_07839" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19794.1" /translation="MARDSRRADPRRVVAVNGGGGGGDVATIRRFILDLVNCPMVTGR SMRCNPDEYCYRDCIHYSGLSAFFISFRVEKSTASSPPMTANKAFLAAGGHGDATMHR DRSKKAYVKAVGNDAVHLRVMYVLRRSALDIDLYNIKKNVKKVKFIINMAKVNMSSVK KHVEKHEYELQMDAISFTPLSRTFVKTFVNSLRLSQLPKNGTKRLIINPEHAKQTYLE IRLAKHRLLTHVEIIVTHLPLDSFQVGQRFSGYSSANLFHLTLSIVTIPTFIIDNIIL IFEELHDWLNDDKAIIRRQCSAYKATTFPFSVRSPASLSLSGACRATALYCVCIRCIQ SKLNFGMETDIEISRVSVEYHTSYRMKRGKGYEGNGKDGDFYR" assembly_gap 555767..555972 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 557202..557211 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<576391..>580405) /locus_tag="ALC57_07840" mRNA complement(join(<576391..576435,576484..576897, 580352..>580405)) /locus_tag="ALC57_07840" /product="hypothetical protein" CDS complement(join(576391..576435,576484..576897, 580352..580405)) /locus_tag="ALC57_07840" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19795.1" /translation="MRVSHRNPREQMANTVCSYAAYLACNLDDTLVHGSDNSFLRWAA TRHTRHTRRIAITFESVYQATSSNCEHVDQSRNGSTWNFDWLFKAQQYKRCKFVRLFT KSLCGISHMCDGFYGSEIDVNGNDDKKKSRVKTDPANIREREGVSGHERERSHRPYPG SHRIRMFLSL" assembly_gap 593963..594646 /estimated_length=684 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <600434..>601363 /locus_tag="ALC57_07841" mRNA join(<600434..600499,601082..>601363) /locus_tag="ALC57_07841" /product="hypothetical protein" CDS join(<600434..600499,601082..601363) /locus_tag="ALC57_07841" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19796.1" /translation="FTVGESGHPSVKLIAARCNNLRHHEHADVLTVGFNVDGVERVLD LRLNTDLIPVGYQQLHQHRGTYKVHTPSKVVSTAWASSIHIRSVLTAFPQTTFALIDI EHKRNSIGYQTPI" gene <607180..>620147 /locus_tag="ALC57_07842" mRNA join(<607180..607287,607504..607551,608854..609043, 609928..610229,610356..610391,610550..610585, 610734..610898,611698..611867,611942..612133, 612323..612919,612999..613200,613572..613776, 614577..614658,617444..618043,618164..>620147) /locus_tag="ALC57_07842" /product="Disintegrin and metalloproteinase domain-containing protein 12" CDS join(607180..607287,607504..607551,608854..609043, 609928..610229,610356..610391,610550..610585, 610734..610898,611698..611867,611942..612133, 612323..612919,612999..613200,613572..613776, 614577..614658,617444..618043,618164..620147) /locus_tag="ALC57_07842" /note="GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Disintegrin and metalloproteinase domain-containing protein 12" /protein_id="KYN19797.1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001590" /db_xref="InterPro:IPR001762" /db_xref="InterPro:IPR002870" /db_xref="InterPro:IPR006586" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR024079" /db_xref="UniProtKB/Swiss-Prot:Q61824" /translation="MRQSDNGPRSMALVTEKASRFKEDPDTPRLQDRASLSAIGAHRH LDFSMYYAELCHYQGSVRDVPSSWVALSTCRGLRGVIFDGENLHYIHPEDENLDSTHY LYKHSDLTTNDTCDRIHRRGNFCHRDDSRGFFSKYSRALTLRNTTFSTEERARARFFV LLGGSAPHGLRDSLQEDWSLLNGLTNVRAKPRSYLPRRLFVLSSVLPRILLPTIVCKE KKEFAQTASPSFQQLTDYLVSKHKRAAEIIRGPYNANRQSRYVELVLVIDKKEYTALD ENLDKVYQHCKDIANIINALYMPLNIFIALIGVQVWSESDEIALSPNGDTTLSNFLRY RREKLLQDIPNDNAQLLTRITFEGGVVGKALKGPICTFEFSGGVSMDHSNVVGLVAAT VAHEMGHNFGMEHDGPDCGCPEEKCIMASSSGSSGPTHWSTCSLEHLALAFEHGMDYC LRNKPQKLFDSPICGNGFVEPGEQCDCGLKEHCDNPCCNVTTCMLHNNASCATGECCD LKTCRPKTAGTECRTAEHECDLPEYCTGQSEYCPADVFKINGETCNGGKAFCYGGMCR THDDQCKLLWGPTGTSSDSQCYEMNNKGTKNGNCGYNRIESSFIRCNNENLFCGMLHC KHLNERLEFGMESVATLSHSFINNGGKIIPCRSAIVDLGLTQVDPGLTPDGAKCGPGK MCVNQKCMSVADLKASVSDGKACPNNCNGNGVCNNLGHCHCNHGFRPPDCLQVGVGGS EDSGPAEDPNGKNDFITAIYVIFLGVLPAIALFLFGIWTDRGHNGLLIKTIDRSSPMS RNIETIDSSLSQDPACVSLLPKAEADERYNNNMFGQFKGFTITPIHSNQSKLAEPTKP APPPPGWMPTVAIKTNIAKANMQKCNVPQRSNLLSSNDPSSTAPMLPPLNPGSTARPL ISSPVLAATTCTSVELVAKVPTRPAPDVPMRPAPPPPTFAPSVKPQRPNSTPLTNVIL PEPEKKNQHHKANKVIDKEILRNLEISNPIPQTEIEIATPVIPVISTTEVEKRNVVLR AQSMRDSKVTSRPFVQTFGSMRQTTPVKRPTSIPASTRPTSPPPGPPNITQTEKAAEN VIKIPGLPGYQNPPVKTVQKPLENTYDDCMNLITESSLTKITEESAMNDNIYAVIEEP VPEKNRKNIELEVTPVDNEYKLPKRIDTIPGGPNSLESMGLLSEIVSEISNRNFDSIY STSTLTRKKKEDNGEDTTKNLENMGSNNSLGGYMNSNHYKVPGGIYSNSTSSKFNSSS STTSSGYLHPSMINVPQVEKKEASKNISDANDNLKSVDNSNLNTLKSNNPNINDELSK ELGMKPPENPTGYKPFASTKTRPSHLIHIKKDDQTENKIPAKPPLNRTKTPPNVAKSP TSKDIPESSVKLARQSSDNTLKSLKSSKVSDTSSTIVKQSSDASPIARQTQVNASKSS SDLDKEESHTTVSVKNVPCSPKDNLGKFNSPDLVSSCSNSNQGGTKSPDVVGSNPKFN LSLKTVQKTPTLPRNGQKTPTTPLKPLNITSKTTSLSEKKKSPTGNASVTKSLSAKEA NTGGTKPSHLTPKVLAKTEIKNGDGGTAARTNPLQRVASGKSNVASLQQKFETNKNSS GVARTIQSANSKKPVARTTEVGGGGLRK" gene <624926..>627450 /locus_tag="ALC57_07843" mRNA join(<624926..625024,625234..>627450) /locus_tag="ALC57_07843" /product="Putative zinc finger and SCAN domain-containing protein 5D" CDS join(624926..625024,625234..627450) /locus_tag="ALC57_07843" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Putative zinc finger and SCAN domain-containing protein 5D" /protein_id="KYN19798.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:P0CG00" /translation="MVKLAYSPLSQLASTDIMSNVCPNNMIKPTLSEVLQSDSVKRLF NQPDLIIKTIPLSPLESRNAFLHKRNGMNSTSNHTTASEISIFPVGTSDEEKEDANLL PSKIKHKKSEIALLPIKKKSCGHYQPCENIICDVTVQQYVDKDCVSPMLALSIEENEI NAPVEKHCRNKYCDALSIDHNRCRQASIKLYKCDSSYTCDICGRTFKKLISWIHHRNC KRKKVYIHNDVDRLHLLKERMRIRELQILEIAKMKKRDYSDPNKVMETLWKNEELIII PQKAPSQPRVSMTLVPNTQLTNTNAQPIINHSQITKSANTFGSASVTVSSQNTVVFPN NTLRSESNVKSIGQVTFPNLQQNSYLESTSVMIPAKAQTQVPVSSSTPVLTLALVPTS TSSTVPTSTSVPTLAITLAPNSASTSASTLVPLTLTLASSLAPAPVSVPAITQISAPN VITTSASTSIVPPNKSCIQLTVSPQTTTVQPINNLSVSPSHIVKSTAIQPKTFLTPIR VVPIANLISPPSLLHRTQGIPKFCIVAEKTTPVTTSNSPSVQPTVATVVSTATVNAPK SLTHVPIPKIHKSKLKKKKQSFFCDYCSKYITTDWYFKVHIAKHKGQKLFFCNFCDES FSNNYDMKKHITNQHTDQKELACDKCNYTCTSLASFKSHIHTHAISSILTKVDSKKQK KSELLKKLENKVNHKLIHNTYERKVKRIKCEDTSDSQNKQQHNKQKHNNKNLSAINKD NNAKTKGCNSFVSVKKIEPENFKSESPITSR" gene complement(<632788..>633026) /locus_tag="ALC57_07844" mRNA complement(join(<632788..632838,632958..>633026)) /locus_tag="ALC57_07844" /product="putative small nuclear ribonucleoprotein G" CDS complement(join(632788..632838,632958..633026)) /locus_tag="ALC57_07844" /codon_start=1 /product="putative small nuclear ribonucleoprotein G" /protein_id="KYN19799.1" /db_xref="InterPro:IPR001163" /db_xref="InterPro:IPR010920" /db_xref="UniProtKB/Swiss-Prot:Q9VXE0" /translation="MNMVIDESIEECKDGTKNNIGMVVIRGNSVIMLEALDRI" gene complement(<646246..>652059) /locus_tag="ALC57_07845" mRNA complement(join(<646246..647856,649115..649180, 649281..649466,649571..649732,650023..650163, 650251..650471,650900..650963,651043..651130, 651824..651924,652027..>652059)) /locus_tag="ALC57_07845" /product="Type I inositol-1,4,5-trisphosphate 5-phosphatase" CDS complement(join(646246..647856,649115..649180, 649281..649466,649571..649732,650023..650163, 650251..650471,650900..650963,651043..651130, 651824..651924,652027..652059)) /locus_tag="ALC57_07845" /note="GO_process: GO:0046854 - phosphatidylinositol phosphorylation [Evidence IEA]" /codon_start=1 /product="Type I inositol-1,4,5-trisphosphate 5-phosphatase" /protein_id="KYN19800.1" /db_xref="InterPro:IPR000300" /db_xref="InterPro:IPR005135" /db_xref="UniProtKB/Swiss-Prot:Q14642" /translation="MLKIWTEEFLSTISRLDPKFIALHCQEVGGKNYEQSMRHVEDFV RLLMSSEELRLFDKIRVFLDEDYSSAEHFTALGNFYFVHESLNDVLLWDFNELSFIPV NGKDVHSGNIEAVSTKEKAKFPQEFFPECKWSRKGFLRTRWSISGTVFDLINIHLFHD ASNFIAMEMFPSVYSKTRRRALEHTLDKFHNDKYPNVPYFLFGDFNFRTDTASVIKKL TENTQEKKLSNKGNISKLQFHNQNDDLILTLGKKEFSHYEHQNIFIKNNGEWLRDYDK ELGDFEGRLFEFPINFVPSYPFQEDINEPVNYMQTRVPAWCDRVLLSPTAKTLVQNID DSKAVEYGIIGPNTCMGDHKPVYLKATLVSDAGMIHCCNLPIASEFCFRVPNNYLELL SMLPDCNSYANARSDSISSNLLHAIPVKHDPYTPDSMDSPSPNALMASGEVPDLYTDH IDSNVVGDNATSMLRSTQTSNTSRRHIDRAVSPALLKSRLELIVQNKKHEDADLEVDA SDIKRSPSECHLRSWSDTDDQWCVRKNRCNSDVSWQRSHVLTEAWVQSKGQQGYHSFS NFANQSSSNSSPPDIVDGLPPDLIIPRIAIINASNFESNASSTYFHDDRLSNYSENKL STYSDGRTKTLSGDAVSSEKSEICDKMDEEECSRLSPSTDRIVGKENNAYLKGHNELM SNKDLYFEEDDRQFIEDECDMCKETKCQIDAQAIIRNSFYVQSDVVSDRMNDKLTMKQ NVPDESFKNIQCTEILLENQSSSLQALRRRREKTDMNPDRINVETLDTPHKKVETKIE PLRDQDCDSHVIKICPDICAVSHDAEIISCESKQKMCTSKNTTRSNSAHSQDISDNAG NVRLKLKAHKVTERYKSNIMERRTRCRKCCCVVS" assembly_gap 664030..664258 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <670049..>690768 /locus_tag="ALC57_07846" mRNA join(<670049..670175,671754..671893,671956..672131, 672464..672565,679889..680063,681336..681583, 689995..690066,690579..>690768) /locus_tag="ALC57_07846" /product="Epsilon-sarcoglycan" CDS join(<670049..670175,671754..671893,671956..672131, 672464..672565,679889..680063,681336..681583, 689995..690066,690579..690768) /locus_tag="ALC57_07846" /note="GO_component: GO:0016012 - sarcoglycan complex [Evidence IEA]" /codon_start=1 /product="Epsilon-sarcoglycan" /protein_id="KYN19801.1" /db_xref="InterPro:IPR008908" /db_xref="UniProtKB/Swiss-Prot:Q5RAP2" /translation="TTMHPIIILLSTLVAFIAAESILMTEVFVIPIRPEIFDWNTDGH SDQFSYQPSLLNAPDLPSWIHYTYSKKDHHGFLYGVAPKDQKYFQLEIVGLNKHTYET RYKVLDMNVLERENLTKYEVHLKIDNLNVEDMFNQNRTQKLLDIFRKKLWKGAADLYV TFLASAIELGARLPLKPSEGEGVVVRLGSTVPFSQELNELQEEVKPLWKMPSCPRDFK RTSVEILFREAEFRLDWCSFRLLEEDQQSLQHESARRGPSANVVDLPSSGISEHTEWR WARSTKASIPTRSYFKEIATTIFVPVILLLVLGALLSTAFCLHHEKMTDLESDEYFDE LFNIFLLREQPVREKREPTPGEGVGNNGIQMVQYAMPERGTLKSLSAQPPSPNDSLSQ SPRYRDLLNIINIQFRA" gene <695271..>698681 /locus_tag="ALC57_07847" mRNA join(<695271..695382,695562..695778,695865..696091, 696568..697769,697890..>698681) /locus_tag="ALC57_07847" /product="Wolframin" CDS join(<695271..695382,695562..695778,695865..696091, 696568..697769,697890..698681) /locus_tag="ALC57_07847" /codon_start=1 /product="Wolframin" /protein_id="KYN19802.1" /db_xref="UniProtKB/Swiss-Prot:P56695" /translation="LIDGPKGSLRRLRSRLAEDGCPESQVILAKQLLEEQCELDVDKE ENAKLGVYWLTKASEQGNLEATDILRKCLATGRGITEHNYYDVKSCLDMTQDEKLARR AAREMFMSLSNGEDFITTEQLQKRMRNLSSPSTSNADYFQSNNTSSNTSQKGLSDNDN DCFPRNGFPDDSPPTKDEDRINDVHGWTDQGEKITEAALVSAAASYARGMLPIVSHAL CMVDPSELVLDTIPLLQRPFIHPFASLKRLYSWLVETLGHRGTSINRVLFTSNLHILL LLLLYSLFGTESLILFIPMALYYLSFVVMVVATFQMLQRKREFNDFRVWSGLFLSYSG GNLNPEEAEYQFCRNNLKPYGHFFLALLLNLMIYPLIAHQWTPQSEITIVAVTLTLIT LCSFMWRDSSRFPDFLALFSFGVHVLAKYPYETDMVVAQSWRFLDIRVPTFASYVVGN GIEFCLNFRAVFYLLIPAVFAKMAARDGWRGTYRILIPHCVTLSWWQIAIFSSQGATW YGLIRGALALVGMVLFLPIAGIASIILPIVAIAKYLSENDLAMRIAITTVLGGMPFFA SWYLRKTRTSRFNWVITLMQIVLGVSAATFLSWPMIMEYNQDSDEAYDIVSTLTWDQY QNYCHQPAWEELSSKAQVQVQCAQLEGMPVSWEGYVTNIRVKSIKNNIAVVLNKLPNN IRTILSCMYGEPYEENCNSGDDTRRKNCKHITNIQKKRNKCYFPSWDQYEFEIFVKMK SGIWGSTTEIRLVADHSFTNFSLNIYPGDKIWFSGALLNNDLETESLLGGAELHIDLE EVGCLACNSLDLKTSYKRYRYRISLSSIIRDLCLSVKTVLNFLLNPIVMFK" gene complement(<697520..>698425) /locus_tag="ALC57_07848" mRNA complement(join(<697520..697680,698191..698277, 698383..>698425)) /locus_tag="ALC57_07848" /product="hypothetical protein" CDS complement(join(697520..697680,698191..698277, 698383..698425)) /locus_tag="ALC57_07848" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19803.1" /translation="MFRLKLVKEWSATRLFVMCLQFFLRVSSPELQFSSYGSPYIQLI VIAILMARSFSDKYLAIATIGKMMEAIPAIGRNRTMPTNARAPLIKPYHVAP" gene complement(<701943..>705539) /locus_tag="ALC57_07849" mRNA complement(join(<701943..702094,702165..702228, 702513..702679,703021..703183,703417..703614, 703776..703888,705425..>705539)) /locus_tag="ALC57_07849" /product="VIP36-like protein" CDS complement(join(701943..702094,702165..702228, 702513..702679,703021..703183,703417..703614, 703776..703888,705425..705539)) /locus_tag="ALC57_07849" /note="GO_component: GO:0016020 - membrane [Evidence IEA]" /codon_start=1 /product="VIP36-like protein" /protein_id="KYN19804.1" /db_xref="InterPro:IPR005052" /db_xref="InterPro:IPR008985" /db_xref="InterPro:IPR013320" /db_xref="UniProtKB/Swiss-Prot:Q9H0V9" /translation="MVVISWLLLLIGVLESFATEWNTQDYMKREHSLIRPYQGTGMTI PNWDFMGSTMVTNNYIRLTSDLQSKQGALWNSPCHIRNWELQIQFKVHGNGKDLFGDG FAIWYAKERMKPGPVFGSRDYFQGLAVILDTYSNHNGQHNHQHPYISAMVNNGSLHYD HDRDGTHTQLAGCEAKFRNLEYDTHISIRYERDTLTVSTDLANKAAWKQCFQVNEVKL PTGYYVGISATTGDLSDNHDILSIRLFELDLIDDPKDREDRSQIVPSAAFYDPPREHI EDPKQHSWSGIKLFLLMLLGALVLIACVVIIIMLHKKHQENARKRFY" gene <709531..>713301 /locus_tag="ALC57_07850" mRNA join(<709531..709736,710475..710532,712024..>713301) /locus_tag="ALC57_07850" /product="hypothetical protein" CDS join(709531..709736,710475..710532,712024..713301) /locus_tag="ALC57_07850" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19805.1" /translation="MGKTPKKAAPGGDERNLYVRRLKATTAPSRASESSLPERHREYE NSNRFVEIISNSELQVPPEFLSHGMLKLAGIQKKVLPGPGKNFKSKLRPPTKIEHQTK QHKILLKNLEIKNTDMQPGSEEAEVKLNVSFQKENVTEENGNNKAAETEKSAMSKEHI DHTYEKISSELQTTKTIEEVLVVDSKTVPQEEEVILEHVDTETKEEQEANDIKLIYEA ESISLSNGKEILDDKQPKDNGQGEELLSAPEEMKNDINEKEETQSEVPTNNESCSVDI VESTTSELSETSESIIQSNIQKDKESIDDTINDPSFISYDSSIMLKDVKIRLNDCLKD NSKLYDVSNTEGIPNQLSRDQSFGRTLRNISGRHSIGRMRHVTLRENRISPNSSLFVN TSTMSMPQDEGIESKVLPYGAGLLSDTFSTNGSPLDRKRRIDTENWSSAKKQKTDEES SSIFNTSINLLKGLRIPSMQVSTPKATPYKFDSTKLDISGIKNDDNKMTAEPIESTKK WCVIM" gene complement(<717830..>744663) /locus_tag="ALC57_07851" mRNA complement(join(<717830..718297,729776..729933, 729976..730084,734695..735014,737121..737665, 744491..>744663)) /locus_tag="ALC57_07851" /product="hypothetical protein" CDS complement(join(717830..718297,729776..729933, 729976..730084,734695..735014,737121..737665, 744491..744663)) /locus_tag="ALC57_07851" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19806.1" /translation="MSKQSVPPPGINSCERIRPERPRNTIQRLVWGPGTQFQVGHIGI PEDEGSNPRMALRRLLRLYEGRQYREAAGFLMKLPHYTLKAALPDIPVDLLIETLPHS LTLLEALYSRLLELNVSDMKILRIEQVLWRVVHLISTSQDHFRPRIWCKLLVSLNRLS PNTKSTLLSRRRALERAVEGLGKHGLVPSSQTNISENSVTPNLVPLPVALREELETRT EAYKLALHKIENFGKHAGTNKADQGVQAASHQRQLSLKYSEIQQRLIDNQSLLNTLEK AGGPCSLENLLAELKRRVEQDKEALREWTALRKSTSGSTNTKNPALAARLLQFSRGCA LALQFMNEDKLQVLHLDENLGDDYEEESSSAGYHTDESCSPTPEPVVTDLTSANITVE QLAERYGALYAQANLHTLDALDALEPLKGASDLKAKILYSVVVLSWRLAGMVQTSRRL EALKILNGVTAAQTAEASPELEECIKRQLATSGVQTGSREVAEQVVSQLERTLYDFPC LRGCAEVKSYATACSTLAWACLARSTPLVLDVAQSLEFRREVHVRHHASPDPHGARIG SVLWPGLREGCQGPCLHRAVVLTC" gene complement(754056..811024) /locus_tag="ALC57_07852" /note="hypothetical protein;nonfunctional due to internal stop" assembly_gap 756869..756894 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 785491..785877 /estimated_length=387 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 789274..789448 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 789994..790099 /estimated_length=106 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 847191..847568 /estimated_length=378 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 857120..857242 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 859102..859130 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 874040..874536 /estimated_length=497 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 886848..886902 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 899049..899058 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 905614..905705 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <907294..>919868 /locus_tag="ALC57_07853" mRNA join(<907294..907352,914305..914706,916048..916189, 917461..917564,918568..918850,919584..>919868) /locus_tag="ALC57_07853" /product="Dopamine receptor 1" CDS join(907294..907352,914305..914706,916048..916189, 917461..917564,918568..918850,919584..919868) /locus_tag="ALC57_07853" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004952 - dopamine receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor signaling pathway [Evidence IEA]" /codon_start=1 /product="Dopamine receptor 1" /protein_id="KYN19807.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000929" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:P41596" /translation="MKVIVRKFVEPFELIRVLSRPTRFEGRCVVRLNSSVSWRFSARR ISAISVGFLLVILIFFSVAGNVLVCVAIYTDRGLRRIGNLFLASLAVADLFVGGLVMT FAGVNDLLGYWTFGMWFCDIWIAFDVMCSTASILNLCAISLDRYIHIKDPLRYGRWVT RRVAIGGIVVVWLLAGLISFVPISLDLHRNDDQPMYEEIVEEHPTCALDITPTYAVVS SCISFYVPCIVMLGIYCRLYCYAQKHVKSIRAVTKLPDTSMAKSFRSKSSRCKPPKPQ AKTKPTSPYHVSDHKAAITVGVIMGVFLVCWVPFFCVNIVAAYCKTCISHRAFQVLTW LGYSNSAFNPIIYSIFNTEFREAFKRILTKGARARGNQPSTSECGEFRSVVVQKRNGS MVECNISPRSSADSCQVGVMAQRHRDTIVSAI" gene complement(<923542..>925776) /locus_tag="ALC57_07854" mRNA complement(join(<923542..924107,924182..924416, 924504..924739,924993..925224,925314..925588, 925680..>925776)) /locus_tag="ALC57_07854" /product="Methionyl-tRNA synthetase, mitochondrial" CDS complement(join(923542..924107,924182..924416, 924504..924739,924993..925224,925314..925588, 925680..925776)) /locus_tag="ALC57_07854" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO_function: GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]" /codon_start=1 /product="Methionyl-tRNA synthetase, mitochondrial" /protein_id="KYN19808.1" /db_xref="InterPro:IPR009080" /db_xref="InterPro:IPR014729" /db_xref="InterPro:IPR014758" /db_xref="InterPro:IPR015413" /db_xref="UniProtKB/Swiss-Prot:Q9VFL5" /translation="MRSSWSQTIKRHYVKDSSQNKYITTPIFYVNSGPHIGHLYSAVL ADAIARYNNMLGHQTFFTTGTDEHGNKIKAAAATAGLPNLEYCMRISQQFREMCDRFE VDYSRFIRTTEKQHCDAVYHFWKRLEERGHIYLGKYSGWYCVSDEAFLCDTEVVEQRD STGKVIKVSAESGNIVEWTEEENYKFRLSIFQNDLKYWLKDENTVRPALYHKTLSQWI DEGACLQDLSITRIRNKVPWAIPSPCDESHSIYVWLDALVNYLTVLGYPNESYKKLWP PTIQIIGKDILKFHGIYWPAFLIAAGLEPPKTLLCHAHWTVDHRKMSKSKGNVISPFE AANDYSEEGLRYFILREAVPQNDANYSSTKIVNILNSELADTLGNLVNRCVGKAVNPS KEFPNPTKYWNVLQSQVADETRESLKSVGRKARESYEEYNLHHVVDAVMNMLHCANKM VAYHEPWQLRKQVDNADSIEELKAVISLALESSRIGALILYPIIPRLSSSLLDFLNIP KENRTWANTAPEFFNNNSLKERHIEHNNLLLFKKIRSQ" gene complement(<926109..>927659) /locus_tag="ALC57_07855" mRNA complement(join(<926109..926737,927500..>927659)) /locus_tag="ALC57_07855" /product="ATP synthase mitochondrial F1 complex assembly factor 1" CDS complement(join(926109..926737,927500..927659)) /locus_tag="ALC57_07855" /note="GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_process: GO:0006461 - protein complex assembly [Evidence IEA]" /codon_start=1 /product="ATP synthase mitochondrial F1 complex assembly factor 1" /protein_id="KYN19809.1" /db_xref="InterPro:IPR010591" /db_xref="UniProtKB/Swiss-Prot:Q1L987" /translation="MTSRARLEKVLEELQRNPYYDKYAQKIAKLQQTSPEEFLQRVEQ QEKKIHEKQEKREKAANFYQTEAKPALEPGTQTKETRLDSIMKVDMIKDKSKEEIIEI WNEYHKQKDCICGTMTPEQYDKMFARGKQYSTFLLPLPREQGYEFIMCQFYGSEVHMT PLLWYQTHKENAPECLTMIHYTELREDKGIILMCGDFDTKLLRVQEAQCLANELQLYY CNDHEHRLQLLEMFTNRPDEFKHMDLIAQLETISLELNNTETKR" gene complement(<929323..>929872) /locus_tag="ALC57_07856" mRNA complement(join(<929323..929526,929732..>929872)) /locus_tag="ALC57_07856" /product="hypothetical protein" CDS complement(join(929323..929526,929732..929872)) /locus_tag="ALC57_07856" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19810.1" /translation="MSPKEPEPIFLINLYLPPTMNSLFAIDDANDAMSLLTSVCLLSH LHSVEPNRGYANDRGVWGGFMGRILASEGHRGRDKVVLTCHDRAVHWWHDKPHRQRAD IFPLAVDTKSSD" gene <929775..>933403 /locus_tag="ALC57_07857" mRNA join(<929775..929903,931178..931287,932104..932234, 932517..932719,932797..933085,933318..>933403) /locus_tag="ALC57_07857" /product="Casein kinase I isoform alpha" CDS join(929775..929903,931178..931287,932104..932234, 932517..932719,932797..933085,933318..933403) /locus_tag="ALC57_07857" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Casein kinase I isoform alpha" /protein_id="KYN19811.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017441" /db_xref="UniProtKB/Swiss-Prot:Q8BK63" /translation="MASLASSIAKSEFIVGGKYRLMRKIGSGSFGDIYLGINISNGEE VAVKLENMRARHPQLLYESKLYKILHGGIGIPHIRWYGQEREYNVLVMDLLGPSLEDL FTFCSRRFTIKTVLMLADQMIGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRGSL PWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYTRGLRFEESPDYMYL RQLFRILFRTLNHQYDYTFDWTMLKQKAASSNISGGVSIAGPGLSQGAQGAQGQGQGQ GQAPTQATAQSANFNLKRWLESSTKLNISIGTNHSSKKQ" gene complement(<929884..>930063) /locus_tag="ALC57_07858" mRNA complement(join(<929884..929931,929980..>930063)) /locus_tag="ALC57_07858" /product="hypothetical protein" CDS complement(join(929884..929931,929980..930063)) /locus_tag="ALC57_07858" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19812.1" /translation="MGRLTIGFRETRRVGVRETGNANRTEETERGMPGVGLPRHWRC" gene complement(<936900..>948635) /locus_tag="ALC57_07859" mRNA complement(join(<936900..937115,937193..937324, 937394..937756,937830..938025,938104..938398, 938486..938722,938792..939216,939286..939568, 939656..939899,939983..940099,941154..941405, 941498..941737,943338..943475,943586..943723, 943743..943966,944429..944482,945127..945193, 945731..945878,947115..947174,947731..947885, 948468..>948635)) /locus_tag="ALC57_07859" /product="Dynactin subunit 1" CDS complement(join(936900..937115,937193..937324, 937394..937756,937830..938025,938104..938398, 938486..938722,938792..939216,939286..939568, 939656..939899,939983..940099,941154..941405, 941498..941737,943338..943475,943586..943723, 943743..943966,944429..944482,945127..945193, 945731..945878,947115..947174,947731..947885, 948468..948635)) /locus_tag="ALC57_07859" /codon_start=1 /product="Dynactin subunit 1" /protein_id="KYN19813.1" /db_xref="InterPro:IPR000938" /db_xref="InterPro:IPR022157" /db_xref="UniProtKB/Swiss-Prot:P13496" /translation="MSFKIGQRVEVPVKECQGVIAYIGYPAFASGKWIGVVLDEPKGK NNGSVKGQVYFKCAENHGMFARQTQLILLDEAGNRTEPVSPSSAGSNATTPDDSAARA RSRLNSVRRKTSPANVTRQQTDKLSGSRLSLSGSRTLLSAPSTESLTGSLHERRDGGE SLIPAPTSTSKRASFVEKSPSTSSPPGKKPKAQDDQNNVTSLTEFYDASIVYDTQWKG NVGCFFHCRILRIITLSLFAPFIYRLVIPSVYMRFKHRYTGPEDFEETLWRHIILLCD NKKNTQRYKMQMYLTLTGFVETLKPQFVPGQVMAGSAAAANLVEEKLSHLQLVQENDN LKSQVRDLTEKVETLRVKRMQDKERIKDFEKTKLQVEQLLEFKAKVMESQASLQRELQ RARQEAREAHVAREQYQEEMSDLAETVEMATLDKEMAEEKAETLQIELEQLKEKLEEQ TLDLEILRTEMSERAAGGGSITGTSSYEVKQLEQQNNRLRETLVKMRDLSAHEKHEFQ KLQKDMDQKKSEILELGRTKEKLSARVEEMEHQIADLQEQVDAALGAEEMVEVLGERK MALEEKVAELEEAVADLEALQDMSDQLAESSKELELELREELDLALGAARDAQRHRDA ALETLADRELTITKFRELTHQLQEQCLQLQQRVQSTESTKTNVRGADQQLAEILDFQK TFAETRAQTKAVDLELRRLDAEEARNHVCYLLSFMPPAFLTRGGDHDAILTLLLIPRM TQKTEILISQVREKYRSIEKIDRTSVMRGHSVAQYSFRSRLCSHMYALQTTLGCFESA LNSCNSEMLLKAGAAYPEMAAQEKSLDSLIELAKRDQLDENLPMDAIEKCCGYFATMF SVLFGESIAVNQARLIVNGTRTLGNTCDAIATDAAAIKVLIHGEGADIGKLCQHVETT CEVIQQHLKSARRRVPRDHAGPAFSVGANLGLDKDCNEQFSTCYQHGVKITKTLQYLL KSALHAITENGDLDTGLPADKLKEMAATSSERIYDTEDLGPVATIKASLTVIQQLAAN LAQKMAECENELAISGQTQSQQQSKESEQITPIVARANSVRKESEETKILSRKLEARD SDIRESRLALREKQEELSEMTLRKELAEKRFATQQHEHEMNVEKLKRKLEEAQNQLKR KEKEFEETMDHLQTDIDSLETEKGQLKEKLKSIGKKTISVSGTDSMMGSTSITSTLDN KYYVQEINALKQALNNEHQQKKKIMCAVLRQKLDRLEPLPSPTNLKSLDTKIQELRKK TTDLVKDVEKTLVYPAVPDLRRKVPETSYHYLLERQRNIMQLKERVDELVAQVRREAI KRTPGGRAEANFAVYPNREMAAAMQERKLLAAEIKIPYNGPEQSFSVNVGPQELRKIH TLLYY" gene <950671..>952443 /locus_tag="ALC57_07860" mRNA join(<950671..950824,951422..951642,951732..951935, 952058..952072,952084..>952443) /locus_tag="ALC57_07860" /product="Nuclear inhibitor of protein phosphatase 1" CDS join(<950671..950824,951422..951642,951732..951935, 952058..952072,952084..952443) /locus_tag="ALC57_07860" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Nuclear inhibitor of protein phosphatase 1" /protein_id="KYN19814.1" /db_xref="InterPro:IPR000253" /db_xref="InterPro:IPR008984" /db_xref="UniProtKB/Swiss-Prot:Q8R3G1" /translation="KLMVDEKKCYLFGRNQQLNDFCIDHASCSRVHAALVYHKHLNRA FLVDLGSTHGTFIGNLRLEAHKPTQLPIDSTFHFGASTRYYIIRERPQTGARPIIEEL EKLSEDMDAGGLLGLPETETELDNLTEFNTAHNRRISMLGITDDEMHKPTRKRKKKGI TFNDDEEVINPEDVDPSVGRFRNLVQTTVVPSKLRNMFRMRMEGGLISLAEDHNLLKH MQPTSTTPQLYHDLPPEQFTPSSMSSINPFSTALTSRLGIALPNPAPEVEMTPNQIQT EVQHVQEHIPGTTEPRVMEPKKKKYAKEAWPGKKPIPTLLV" gene complement(<954595..>957513) /locus_tag="ALC57_07861" mRNA complement(join(<954595..954834,955653..956234, 956831..957132,957309..>957513)) /locus_tag="ALC57_07861" /product="Tubulin alpha chain" CDS complement(join(954595..954834,955653..956234, 956831..957132,957309..957513)) /locus_tag="ALC57_07861" /note="GO_component: GO:0005874 - microtubule [Evidence IEA]; GO_component: GO:0043234 - protein complex [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005198 - structural molecule activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0006184 - GTP catabolic process [Evidence IEA]; GO_process: GO:0007017 - microtubule-based process [Evidence IEA]; GO_process: GO:0007018 - microtubule-based movement [Evidence IEA]; GO_process: GO:0051258 - protein polymerization [Evidence IEA]" /codon_start=1 /product="Tubulin alpha chain" /protein_id="KYN19815.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR017975" /db_xref="InterPro:IPR018316" /db_xref="InterPro:IPR023123" /db_xref="UniProtKB/Swiss-Prot:Q91060" /translation="MHVGQAGVQMGNSCWELYCLEHGIQPDGTMPSDKVSGSNDCFNT FFNETSSGKMVPRAVMIDLEPTVVDEIRMGTYKQLYHPEQLITGKEDAANNYARGHYS IGSEIIESVMDRVRRLTDQCTGLQGFFVFHSFGGGTGSGFTSLLMEKLSDDYGKKSKL EFVIYPAPQVSTAVVEPYNAILTTHTTISHSDCAFMVDNEAIYDICRRKLGIERPLYA NLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVVSAEKAYH EGISVAEITSECFEAANQMVKCDPREGKYMACCLLYRGDVVPKDVNAAIAAMKGKSYI RFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVSMLSNTTAIEEAWAKLNRKFDLMY NKRAFVHWYVGEGMEELEFAEAREDLAALERDYEEVALESPSTPDTPLEY" gene <957308..>957559 /locus_tag="ALC57_07862" mRNA <957308..>957559 /locus_tag="ALC57_07862" /product="hypothetical protein" CDS <957308..957559 /locus_tag="ALC57_07862" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19816.1" /translation="PTTVGSRSIITARGTILPELVSLKKVLKQSFEPDTLSDGMVPSG WMPCSRQYNSQQELPIWTPAWPTCIDIHSRCKLHSVFYV" gene <960397..>964858 /locus_tag="ALC57_07863" mRNA join(<960397..960567,960667..960887,961077..961209, 961321..961466,961650..961837,961939..962130, 962215..962354,962785..963069,963138..963254, 963568..963721,963908..964025,964156..964343, 964722..>964858) /locus_tag="ALC57_07863" /product="hypothetical protein" CDS join(960397..960567,960667..960887,961077..961209, 961321..961466,961650..961837,961939..962130, 962215..962354,962785..963069,963138..963254, 963568..963721,963908..964025,964156..964343, 964722..964858) /locus_tag="ALC57_07863" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19817.1" /db_xref="UniProtKB/Swiss-Prot:Q8CAI1" /translation="MDTNYRANIAKWLPLSDGALDKWLIDASLLDEKMGKLAGCIALI IEDFAEARTCDQEIFEEVIDSLEELIESYKLTCNPEELSSHPIYKYKINHLSIVLKRK LNIIAKFTQDLINDIVDYKSDENIRIVFRMVNSYNKILNMNRDVSDSSVNAFYNDCPS MLEPLKKLSVTKILQILAKNRAEESCHELIDCLLANYEPHEKIEPVSTTNDVDVSESS SIEIYRALTRHLTPPITSATSTSEVEASDIESVQALVNTQNEQILRLLNVVQEISPQL LGTDALKTNKGEIKLRSSAIKKVKNYYQEVAWGALSSILDHVILWWSREALATHHSHG AQHLKDWLRQFIQGNEIPPTVRSALQNLCDALGYHTTITAWDQTFRLAYTSAFECHSK PSATEGTDTGQMFVELFQLLVTLSNECEVGGEWVIGAPLVELPLSEQIVVLHRMDHSV HTARLWAIQETKIIAHTWDLDVLFLLVKGDVVNCLEELSYLKLADHTTALSMNSISVQ IYVCTKMRAKIVSEVKANIELLQICPAKCIDTLAKICRVISLANLHMCFPQSNYWRKN NSTSPVAASLYVETYFEKLLLPVLEVIEDHETSNMILRIMCEAWLDYIYLHRIKFSEY GAQQLLTDFAYVSTWVTECSIISQNVRNHLLKNEVLRRCEGVGRLLLRHPGEAIAMRK RLARRTNERGSPESPGLERMPAEMYVPNQEQWLELRAPKRYNFCCME" gene <968414..>973028 /locus_tag="ALC57_07864" mRNA join(<968414..968547,968967..969416,969995..970547, 971224..972341,972809..>973028) /locus_tag="ALC57_07864" /product="Chorion peroxidase" CDS join(968414..968547,968967..969416,969995..970547, 971224..972341,972809..973028) /locus_tag="ALC57_07864" /note="GO_function: GO:0004601 - peroxidase activity [Evidence IEA]; GO_function: GO:0020037 - heme binding [Evidence IEA]; GO_process: GO:0006979 - response to oxidative stress [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Chorion peroxidase" /protein_id="KYN19818.1" /db_xref="InterPro:IPR002007" /db_xref="InterPro:IPR010255" /db_xref="InterPro:IPR019791" /db_xref="UniProtKB/Swiss-Prot:Q9VEG6" /translation="MRGITERTPLRRSTDSIDYIEFASLLRTRRTRLRQFQCCVCGIL IVVFTMALVVSVSYSMSRTNSTNPGNDNATSPDSLDSALRLGLALESISHAAFSSTAS ATTEPNSILISKEDINTSTKHLSQLEYTQGLRAGEQAIKDRLSADVIAAKSPLLPSSP ESRHRHAVSTCSNVSALALAAVGEIAATKMIEKMRSTHNEPSAIDTIFDSGWLPKNVC KRYFDRTCKTGKYRTIDGSCNRPRSWGASMTPFRRALPPDYADGIESPRMARSGKELP SAREVSLKIHKPSASSNPSFTVMLAVFGQFLDHDITATALSQGINGSSISCCSPLGRQ HPECFPVQVATGDPVYDLTGKTCMDFVRSAPAPQCKLGPREQLNQVSAFIDGSAIYGS DNETACNLREFIGGHLKMQYTPDNRTLLPPSTNPNDGCNREAERRRGRYCFAAGDARA NENLHLTTMHLLWARQHNRIANELARVNPAWNDETLYQETRRIVGAQLQHITYREFLP IIVGDKKMNEQNLRPLMSGYKKRMHHPDELENDPTIANHFATAVFRFAHTLLPGLMRM TDAEKDTPSYIELHKMLFNPYSLYAEDGIRRSVNSATTNVIQKYSTHVTSQLTNHLFE DPMANSVVPCGLDLVSLNIQRGRDHGLPGYTVWREYCGLGKVETFGGLEGYLDHEVLK QISDLYETVDDVDLYTGALAEIPESDSLIGPTFTCLILNQFVRLQKGDRFWYEFVDQP YPFTEGTINFGESRLSTKISDQLTEIRKSSMAKLICDCSDGITHVQIQVMRSAGTNNS VVSCEDIPGPSFTPWKENYTSNLTSS" gene <975980..>977426 /locus_tag="ALC57_07865" mRNA join(<975980..976139,976576..>977426) /locus_tag="ALC57_07865" /product="Ubiquitin-like domain-containing CTD phosphatase 1" CDS join(975980..976139,976576..977426) /locus_tag="ALC57_07865" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Ubiquitin-like domain-containing CTD phosphatase 1" /protein_id="KYN19819.1" /db_xref="InterPro:IPR000626" /db_xref="InterPro:IPR004274" /db_xref="InterPro:IPR011943" /db_xref="InterPro:IPR019955" /db_xref="InterPro:IPR023214" /db_xref="UniProtKB/Swiss-Prot:Q6DI37" /translation="MEGELRIVVKWSGKEYDILDIQEEDTVLTLKERIHRETGVRPER QKLLNLKFKETCSLLGKAAQDEDIIGKLNLKPGFKLMLMGSREEDIAEVSQAPEDVPD VINDLDIEEEEVEIEKAEINLRKIQIRIDRYVITELNPLRNGKKLLVLDIDYTLFDHR SVAESGAQLMRPYLHEFLTRAYKNYDIVIWSATSMRWINEKMKLLGVSNHPNYKIAFH LDVLAMITVHTPKYGVVGVKPLGIIWGKYKQFSAKNTIMFDDIRRNFIMNPQSGLRIK PFKHAHTSRVKDFELLKLSRYLELIADVEDFQILNHRKWEEYKPKKNDHSSEQTSSND KQ" gene <979365..>984880 /locus_tag="ALC57_07866" mRNA join(<979365..979461,979685..980091,980176..980443, 980708..980858,980980..981152,981240..981432, 981517..981844,981952..982022,982224..982448, 982881..983102,983191..983504,983577..983786, 983883..>984880) /locus_tag="ALC57_07866" /product="Phosphatidylinositide phosphatase SAC2" CDS join(979365..979461,979685..980091,980176..980443, 980708..980858,980980..981152,981240..981432, 981517..981844,981952..982022,982224..982448, 982881..983102,983191..983504,983577..983786, 983883..984880) /locus_tag="ALC57_07866" /note="GO_function: GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]" /codon_start=1 /product="Phosphatidylinositide phosphatase SAC2" /protein_id="KYN19820.1" /db_xref="InterPro:IPR002013" /db_xref="InterPro:IPR022158" /db_xref="UniProtKB/Swiss-Prot:A8E7C5" /translation="MELFRTDTHFIFVKERHSLWCDKYTGEFAAKSEMMILMMDFTDW EWATPKDLECLGMFYGIVGKIEQTSVLEPRLMLIKDITPAGELHGGHVVYKIKSIAFL HIGTENMDIGLLPCKKHQYVLKKKGSSGLFDVPQKAALAKTWGTIKNATNTIKNTTQH AAALATSQMKSTVIKRSIVKDKDRFEKRILEELNKIFTETDSFFFCQTGDITNSLQRQ CIMESQHGQGNQDKPLWQRVDDRFFWNKHMLHDIINLNVHKANCWILPIIQGYVQIEK CIVEVGFDEQPQQEIFNLAIISRRSRFRAGTRYKRRGVDDDGKCANYVETEQLVWYHD HQVSFVQVRGSVPVYWSQPGYKYKPPPRIDKDEAETQIAFEKHFGEELAFYGPICIVN LVEQTGKERIIWEAYSNHVFNYNHSDITYTIFDFHEYCRGMHFENVSILVNALATMLA NMGYCWRDKQGTICVQKGVFRVNCIDCLDRTNVVQTALGKAVMEMQFSKLGLIPPDGI LPANIRQTFQSLWANNGDIISKQYAGTNALKGDYTRTGERKFTGLMKDGMNSANRYYQ QHFMDDLRQAAIDTLLGNSIDVHQLNNDWLHYLDILDNCCLELIPMKPPNIQLQLATH PDFLYATALYNLARYYLNRFKDVYRQATIDMMLGNSVSEEVFLERTDEEDNAATAIHV KLLIEDCKKLLIPDPEVILGSWGVIDADPITGDPTETEMDTILILTRDSYYIADYDDQ IDKVTNYQKVLLDDIVLIEFGQPENMVSFFKNKHYYCIRINYKVNGDYGYFHMFRSTN LRFFNNMAVVIKTEEESIESLKAICEAISIAMEIANLPKVPVAMNVTLDKRKSKLVNV KGSTGLLDISSLPELTRNVSETQLLALKTAGTKALSNMSEQFSKLNKLSQSFSAKKPI DLAKNISNRPTEKVSKPIFTVGNSNISGNAEEKSNSSSSSSSSENIEMTHIHVEKPEN FSHDKHLMEAYTPLIGIIMGVKNTNVVDGSVCDSNVNEEVSKKMRPNNMNLNSKPDVA IDALHLIPQTGSGTSTLSTSPQKTTATTPEITVYDTGDNIGEERDRMIPLSSLSLTKN ISHSTGDVDNKASIGVKSTTLQTDNRLDEKKRSASEQDLTLNITSSQSESALKSIKEN IASVTSPVASTAKDILLPFSKFAKGVQTLGANLDPRKLKTGQVMRNLSEHHLEERQKL QERWASCQSKLIAL" gene <987860..>989660 /locus_tag="ALC57_07867" mRNA join(<987860..987931,988005..988559,988660..989362, 989434..>989660) /locus_tag="ALC57_07867" /product="Zinc finger CCHC domain-containing protein 4" CDS join(987860..987931,988005..988559,988660..989362, 989434..989660) /locus_tag="ALC57_07867" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0032259 - methylation [Evidence IEA]" /codon_start=1 /product="Zinc finger CCHC domain-containing protein 4" /protein_id="KYN19821.1" /db_xref="InterPro:IPR001594" /db_xref="InterPro:IPR001878" /db_xref="InterPro:IPR002052" /db_xref="InterPro:IPR019369" /db_xref="UniProtKB/Swiss-Prot:Q6DCD7" /translation="MNDARGVECLWGNPINYPQCPHGNFSAGPTLLFEKYVEEGVKKF YACSACRDRKLCRFYLKYGQELSKSQKHMWELENKKFAQRYVHQELYIRFNKLKIESV AKRNYCHNCEKLIFNSEKDKHMDHDITENLTDYQMHHPTELLRPLENAKKEAQYLFSK KSTEDIINMLLKLGAKQILCIGTPRIHEYIIEHYTDKISSLLLDFDGRFHNFFGPLDY CWYNLFNHHFFNKNAINVFKDLLTQNEGKDTYLICDPPFGGRLEPISFTIKTIFDLHT KLNKHVCNDNSFLKIMFIFPYFMEHIMREKSNPPHVTGGLRDLKMSDYKVDYDNHPLF ISEKYGRKQGSPVRIFTNVPLNLLELPLSDGYKFCQDCAKWVSSENKHCKKCKECTSK DGRTYKHCNICKRCVKPTWKHCRICKRCMLEKHTCGSIPNIVGRCFNCDKLGHTRKEC PNLPSTEITTETNIKKRKADCELKTVKKSKVRHSKEVIKQKAILVDKKIVLKPRKNKN LKNKKLLQIK" gene <990209..>992691 /locus_tag="ALC57_07868" mRNA join(<990209..990334,991129..991333,992573..>992691) /locus_tag="ALC57_07868" /product="Vasotocin-neurophysin VT" CDS join(990209..990334,991129..991333,992573..992691) /locus_tag="ALC57_07868" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005185 - neurohypophyseal hormone activity [Evidence IEA]" /codon_start=1 /product="Vasotocin-neurophysin VT" /protein_id="KYN19822.1" /db_xref="InterPro:IPR000981" /db_xref="InterPro:IPR022423" /db_xref="UniProtKB/Swiss-Prot:P08163" /translation="MLKELIVFASLIFLSYACLITNCPRGGKRSDIASSFKTVIRECP SCGPNHLGQCFGPYICCGPSIGCFIGTPETFRCRKESLYTRPCIAGYAMCRGNTARCA SNGICCSQASCHMDTSCKISDVGNDRKLDDNVNVILPGNEVSNEILQ" assembly_gap 996899..998711 /estimated_length=1813 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1010999..>1018153) /locus_tag="ALC57_07869" mRNA complement(join(<1010999..1011340,1014364..1014637, 1015004..1015292,1017892..>1018153)) /locus_tag="ALC57_07869" /product="Prostaglandin reductase 1" CDS complement(join(1010999..1011340,1014364..1014637, 1015004..1015292,1017892..1018153)) /locus_tag="ALC57_07869" /note="GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Prostaglandin reductase 1" /protein_id="KYN19823.1" /db_xref="InterPro:IPR002085" /db_xref="InterPro:IPR011032" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR016040" /db_xref="InterPro:IPR020843" /db_xref="UniProtKB/Swiss-Prot:Q3SZJ4" /translation="MIMFKSMQREVSWDRCRFIVTIIARSFRDNSEIALTIPRNICIR NFSSQSHEIMKARKYVVVNHFVNEAKPTDLKLVEEELPPLQDGEYLAEAEYFSVDPYM RPYVRRYPLGITMLGTQIAKIVESKNPAFPVNKRIVGNMGWRTHTIVNPKFKDLVFQE HPYLLPDIGDLPSSLCLGILGMPGNTAYFGLLELCKPKSGETIVVSGAAGAIGSHVGQ IAKNLGLNVIGICGSDEKCNWLIEEMGFDFAINYKTMPVASNLRKAAPQGVDCYFDNV GGDISSAVMYQMKPFGRVAVCGSISSYDADSSSLPKCTILQPILSKHELRVEGFLVTR WMNRWNEGIMQNLQWLREGKLRYRETETKGFENMFEAFIGMLRGENIGKAIVQA" assembly_gap 1019249..1020275 /estimated_length=1027 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1025288..>1025563) /locus_tag="ALC57_07870" mRNA complement(<1025288..>1025563) /locus_tag="ALC57_07870" /product="hypothetical protein" CDS complement(1025288..1025563) /locus_tag="ALC57_07870" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19824.1" /translation="MRNIHYTALDWAERLVELRGLQRLMEVASEMEEYKYESSLHITS STRTITSVCLAEIYENMYYDAAKEKFSNAIDEFIKDKLLSPDIDSKV" gene <1028282..>1037600 /locus_tag="ALC57_07871" mRNA join(<1028282..1029198,1029283..1029487,1029559..1029834, 1029913..1030109,1030981..1030999,1037352..>1037600) /locus_tag="ALC57_07871" /product="SHC SH2 domain-binding protein 1" CDS join(1028282..1029198,1029283..1029487,1029559..1029834, 1029913..1030109,1030981..1030999,1037352..1037600) /locus_tag="ALC57_07871" /codon_start=1 /product="SHC SH2 domain-binding protein 1" /protein_id="KYN19825.1" /db_xref="InterPro:IPR011050" /db_xref="InterPro:IPR012334" /db_xref="UniProtKB/Swiss-Prot:Q9Z179" /translation="MSEHTHIYTFHDKTLAERLEEYTNILSAQGRIVPASNIRTEWVC DVELVIEPVGWQALWKISRMTCENYGIRYPTIVKVEVLGMDFPMLNALVKITAVQDDI HLPEKHEVPLVELYPTIDQQNHSLDIVGTAHCVDRLRFFYNYLWMPWDEDEDDDIDWV EQHLERRIRLYFDMNNGIINKETCDIIKSLVSEGKEIRKKISTCESLLPEDFQEDDMP EELAQETCTLMKLHFRLQQIKAEMDLLENPSLRGLLGKNQSYNRRKKRSDNENGKSVY YFVWLGGIVKELQELSNKIQTMLPEDAPIKICGYLDDVMDTFETGDTILLGEGNYSIK GSTGLQEGGTIIGISNTENTIISPHDSNMSSSLFDFSSNEILLRNICVDLGLLQAGII IRKDCTVIVTGSRIRVSNVTANSNAKWGAVVMPGAKLVLENTVFQELGTAIIIYGTGE VVMNNCQFENCSEGVRLNDNARFTATKCSFENIKSGHAIVMETEKVTRSESIEVGSEL SSVSLKNISLNECKFFNNHKGSIILRISIKIEVIIKTKCNHTATSPLIDTSHDMVEMT APTQSVDGHTQFGNTRHLEPSDCIFVFKDTFSDYEEPPSDEEVSTTFNRRDRSS" assembly_gap 1036982..1037094 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1046728..1046892 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1057315..>1057551) /locus_tag="ALC57_07872" mRNA complement(join(<1057315..1057419,1057501..>1057551)) /locus_tag="ALC57_07872" /product="hypothetical protein" CDS complement(join(1057315..1057419,1057501..1057551)) /locus_tag="ALC57_07872" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19826.1" /translation="MLVAGDIYEVDRSSHRGPIETEIELSLMYPSWMGYKRCRWRIHD RGRPSSR" gene <1080016..>1080410 /locus_tag="ALC57_07873" mRNA join(<1080016..1080048,1080135..>1080410) /locus_tag="ALC57_07873" /product="hypothetical protein" CDS join(<1080016..1080048,1080135..1080410) /locus_tag="ALC57_07873" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19827.1" /translation="IEAPQGLFYPMHATVIHLEPLRDEIAGWRTTRSRLFRFRKKSLQ RGDATGPGRHTFGKYVLHAHLHFVKLIYPAIVTFNQFINLRFSSSASDFLSIVIFNVT " gene <1089490..>1096400 /locus_tag="ALC57_07874" mRNA join(<1089490..1089642,1096305..>1096400) /locus_tag="ALC57_07874" /product="hypothetical protein" CDS join(1089490..1089642,1096305..1096400) /locus_tag="ALC57_07874" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19828.1" /translation="MHHTAPWYLPWGLKLVPLPIPPGHPASGIPNPAGLHLLTPLPGI YAPEPRKRGNGSRIKLCPLRHLFRMKRTTTNSQKDSFP" gene complement(<1106367..>1153945) /locus_tag="ALC57_07875" mRNA complement(join(<1106367..1106621,1153895..>1153945)) /locus_tag="ALC57_07875" /product="hypothetical protein" CDS complement(join(1106367..1106621,1153895..1153945)) /locus_tag="ALC57_07875" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19829.1" /translation="MLLPLMLPQAQERARGKLPRKYRLRGAKSVNTSASISANFAKHC VIVVLYVCRAENEQVRALKATTRKQADKLAIRKDEGLNVRQELQLPVIVRNCQRRDV" assembly_gap 1120555..1120644 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1130013..1130054 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1153880..>1154662 /locus_tag="ALC57_07876" mRNA join(<1153880..1154011,1154193..1154297,1154477..>1154662) /locus_tag="ALC57_07876" /product="hypothetical protein" CDS join(1153880..1154011,1154193..1154297,1154477..1154662) /locus_tag="ALC57_07876" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19830.1" /translation="MPCRAFTACSLLRLRQHQRQQHPDAQWSMVPCRCPLYPLDIPRS VDLKPLRETAVAVPAPKITEKRKAEDADASKDLKKKLQLAEQARCLLFYVLSPDPDFR NCQGFLHRPFMTHHYFCRSICFPNRIVAPCTVLSRITE" gene <1164690..>1173247 /locus_tag="ALC57_07877" mRNA join(<1164690..1164858,1169120..1169324,1173079..>1173247) /locus_tag="ALC57_07877" /product="hypothetical protein" CDS join(1164690..1164858,1169120..1169324,1173079..1173247) /locus_tag="ALC57_07877" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19831.1" /translation="MYTGYREVACSRGLTTPVTYLLRSLFQAKLETKALKAKRPGFTD ERYNETSYYVEHVVQVNASFAELLARLTYIQKRGEKSVAFPSPAGTIVRHCWIERYVP YADVSSLSRVRLPFAITAVHGIRTNENNLCVTKNLSNFATAWLVLVHGSSCFILYLAE DKQRSCARYIKRQPKLDPVR" gene <1178484..>1191564 /locus_tag="ALC57_07878" mRNA join(<1178484..1178642,1178755..1178791,1181211..1181433, 1187028..1187237,1189163..1189190,1189259..1189616, 1190946..1191097,1191193..>1191564) /locus_tag="ALC57_07878" /product="RNA pseudouridylate synthase domain-containing protein 2" CDS join(<1178484..1178642,1178755..1178791,1181211..1181433, 1187028..1187237,1189163..1189190,1189259..1189616, 1190946..1191097,1191193..1191564) /locus_tag="ALC57_07878" /codon_start=1 /product="RNA pseudouridylate synthase domain-containing protein 2" /protein_id="KYN19832.1" /db_xref="UniProtKB/Swiss-Prot:Q8IZ73" /translation="VGRMQGPRGYLAVRGRDFCGEILRACRRIFRAQSIDGKTERTPD NVTEQNAERTRCNEYDGSCPIGLRKVYPYYFTFTTFTKGRWVGEKILEVFAREFRAHP AEEYERCIRAGTLTVNYQKVDVDYRLRHNDLLANVVHRSAVGVRDAQRHDATSSDISR SYLRYRNNYVTRVLHKDGIQILWGGVGRSNITEPTVNCYDSRTIAEMDGKDRDLKVRQ AGRDASFSVAIFQLMSRCSWYSRSMVQNSLSKGSLEKTRGRDECRVRSLLAFIPGSFL GIVPVYLRCYERSLASFPVMREIRWDDSISRKSPSVGERFALPSTPCNFAGELVPVDA SANGLYIIIQCDERRKQVILLEFYSRLSNGYFEKNVWLDGSEDSNYINQNSSSLNINL RKMSGIAHPWTQSMEIHPRSANDKAGHLRALCLRVADTRVKRRRRCPTSTTSVPIPSC TRSMLINQPVAGLPVAPSTRDTLLYRFCASPAIFAALPALVCKPLVSLKAPAPFRLIC AKIE" gene <1204496..>1209832 /locus_tag="ALC57_07879" mRNA join(<1204496..1204642,1208689..1208865,1209032..1209518, 1209642..>1209832) /locus_tag="ALC57_07879" /product="RNA pseudouridylate synthase domain-containing protein 2" CDS join(1204496..1204642,1208689..1208865,1209032..1209518, 1209642..1209832) /locus_tag="ALC57_07879" /note="GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO_process: GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO_process: GO:0009451 - RNA modification [Evidence IEA]" /codon_start=1 /product="RNA pseudouridylate synthase domain-containing protein 2" /protein_id="KYN19833.1" /db_xref="InterPro:IPR006145" /db_xref="InterPro:IPR006224" /db_xref="InterPro:IPR006225" /db_xref="InterPro:IPR020103" /db_xref="UniProtKB/Swiss-Prot:Q8IZ73" /translation="MCKRKRNKATLSWLRLVCCRHEVPVTSEPITVIHMDEDVVVVNK PASIPVHPCGRYRHNTVVFILAKEYNLKNLRTIHRLDRLTSGILLFGRTPKKARQMEH QIRNRQVHKQYVCRVEGEFPEEEVICSEPIEVVSYKIGVCKVSEKGKDCVTRFKRLSY NGKSSVVLCKPQTGRMHQIRVHLQYLGYPVVNDPLYNHVVFGPHKGKGGNIGKTDEEL VRDLISIHNAENWLGMDGDSDMSLFKPKLELEERMLGSGNDKDNGSSPSSTPDSTFAN DKVTVDPHCYECKVKYRDPKPSDLVMYLHAWRYCGPGWEYETPLPAWAASDWTGDDR" gene <1210085..>1210723 /locus_tag="ALC57_07880" mRNA <1210085..>1210723 /locus_tag="ALC57_07880" /product="hypothetical protein" CDS 1210085..1210723 /locus_tag="ALC57_07880" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19834.1" /translation="MLRSERNGDCWNNLTSLDMYISANSSSTRCRKRQFGVIMKRFRR IIVYAQKFTLVLSRQVYPSHAFSFRYIFLAKSHTNPSCGRFYAGNDPRRDAIMRINHS EDKRQPLLPILLPQSCPDFGSQLINQIIIIIIFVSPQQFSGFLNHVSSEQTWSALYNY AVKLRRDVVIRCNVIVPTIVSLRVTAVRMFLHGRLIDVDLISRRTSLQLPNQ" gene <1216347..>1216571 /locus_tag="ALC57_07881" mRNA <1216347..>1216571 /locus_tag="ALC57_07881" /product="hypothetical protein" CDS <1216347..1216571 /locus_tag="ALC57_07881" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19835.1" /translation="PPVLSQLFDVALFCSFIRASISGLKCLIRPCTGHAAPSAKAHIV CSSICFVSSHSMSISCISALPSTNLQKKLL" gene <1217077..>1217842 /locus_tag="ALC57_07882" mRNA join(<1217077..1217225,1217629..>1217842) /locus_tag="ALC57_07882" /product="hypothetical protein" CDS join(1217077..1217225,1217629..1217842) /locus_tag="ALC57_07882" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19836.1" /translation="MTGVEEPPGITPNKLSHPPITPPACLSISSFRGMDISSSTVHGL FTCPEMRKNISVTLTGATATVSTLVTVVGHPNTPTSAGNGGFSLGFPCFPSIDSMRAV SSPQIYAPAPRCTKMSKS" gene <1220054..>1222292 /locus_tag="ALC57_07883" mRNA join(<1220054..1220191,1220576..1220973,1221392..1222125, 1222207..>1222292) /locus_tag="ALC57_07883" /product="Prolactin regulatory element-binding protein" CDS join(1220054..1220191,1220576..1220973,1221392..1222125, 1222207..1222292) /locus_tag="ALC57_07883" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Prolactin regulatory element-binding protein" /protein_id="KYN19837.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="UniProtKB/Swiss-Prot:Q9WUQ2" /translation="MPSRRNKGGLLARVNFPLYTLQMLTSRHILVGGGGGSSKTGIAN GFFLLLQEIFELSHNGIHFVAEEVTRHETGPSVVMNCASHNNGKKTWIVAGQESHCQL YNVNPKVVTSENGELIKGPTAAANKDGLRHRRNSEKVEDVHSPIERIEEIKDDNSNVK NKKLQLVLKPADSVQTAFGITLISNKNFLAYRNGEPLQRVVRVCLQGTIMATGGTDGR VRLWKFPQLHKLYDLDAHGKEIDDLDFSPDGSLLVSIAKDGKAFLWNLNNGTRNKELT WTVPDGVKYMYKRCRFRKLTENKTKLDLFVLSNAVAAKNPSFLQLWDVHTGAITKSAS YKEALSALAVSDDGKFVAVGTMFSGSVDIFVAFSLRKALHVPGAHSMFVTGLEFLPTK LDGPAITSNTETAVVSISVDNRICIHSIPFRHTLPFWFVIILIVISICGAFIFCSYLG I" assembly_gap 1233758..1234652 /estimated_length=895 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1254927..>1271296 /locus_tag="ALC57_07884" mRNA join(<1254927..1255099,1255265..1255412,1258022..1258222, 1263040..1263200,1266223..1266509,1267880..1267998, 1269260..1269385,1270988..>1271296) /locus_tag="ALC57_07884" /product="Scavenger receptor class B member 1" CDS join(<1254927..1255099,1255265..1255412,1258022..1258222, 1263040..1263200,1266223..1266509,1267880..1267998, 1269260..1269385,1270988..1271296) /locus_tag="ALC57_07884" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_process: GO:0007155 - cell adhesion [Evidence IEA]" /codon_start=1 /product="Scavenger receptor class B member 1" /protein_id="KYN19838.1" /db_xref="InterPro:IPR002159" /db_xref="UniProtKB/Swiss-Prot:Q8SQC1" /translation="LFLQNLQMRPHSFLFKIWKEPNLDIYLKIYIFNITNPIEFLSGK EKLKLQELGPYVYQEYLVNDNITFNDNEDTISYVPRRTVVYVPEMSVGDPMEDIVNVP NIPYLGVSSALSDAGFMVNYPIVQLANLMNTKPILNISVYDYLWGYEDSLVKLASRIV PNFINFLKFGLLDRMYDEGENIVTVTLQKNADMAEEKGRYLSIDKYNGSPGMAQWGYV ETEGNETREENTKCNMLQGATEGIVFPSYIDKRAIFRIYRKAFCRPLPIIFRKEIWAD NGLPGYFYTLTDDFASPPDRNPDNECFCRKMKTCLKKGLVDVTPCYYNIPAAVSLPHF LDADPSLLENVEGLKPDPEKHKSYVIIQQTVGMPMFFHSRMQTNLIMSHLRYNSKIAV FSDTTIPLFWSDLSVTSLPTYITIILKLVLRILPIAQIMFMYLLGIIGVTTSVLSLIS IMWIFNQQQQQEQEMIKNNDNSDSRVPLYNGHYTPINIVSPLKKIASQTDCLTDYYN" gene complement(<1272686..>1274872) /locus_tag="ALC57_07885" mRNA complement(join(<1272686..1273024,1273263..1273702, 1273960..1274231,1274307..1274544,1274776..>1274872)) /locus_tag="ALC57_07885" /product="Serine/threonine-protein kinase pelle" CDS complement(join(1272686..1273024,1273263..1273702, 1273960..1274231,1274307..1274544,1274776..1274872)) /locus_tag="ALC57_07885" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0004713 - protein tyrosine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]" /codon_start=1 /product="Serine/threonine-protein kinase pelle" /protein_id="KYN19839.1" /db_xref="InterPro:IPR000488" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011029" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q05652" /translation="MDNIKYIYHLPFSERSEFCKIMNQNDKWEELAGIWMQYDVLTIQ SLRKEKNPTDELLTLWGHFNHTIAELFVLLSRMQHYQAMVPLLPFVEQRFHRLFYNGE ANLQNMSRKHVNKIFNQPTAQLGISPSNSNNLLVASPAAAAVFLPSPQNTGSNEKKIN ESPLPKTETTLPQASYSELAIATDGWNQHNILGKGGFGIVYRGFWKNTDVAIKKIRQK GSDSDESYILQLQQSLKEIKILNSRTHENILPLYAYSFGGEAPCLVYQLMKNGSLEDR LLLRQKTKVLTWMQRHEIAKGIARGLQYLHTIGDKPLIHGDIKSANILLDKNFEPRIG DFGLAREGLERDSMKISRIHGTRPYLPEEFLRDKKLSTKIDTYSYGIVLFEMATGLRA YDDIRPEKLLVDLIEAWKDKDISLLIDNKAGEENKQVYKNLISIGKWCANGLAQNRPE MILVFQTLNDL" gene <1278731..>1279977 /locus_tag="ALC57_07886" mRNA join(<1278731..1279411,1279451..1279701,1279770..>1279977) /locus_tag="ALC57_07886" /product="Ribosomal RNA-processing protein 8" CDS join(1278731..1279411,1279451..1279701,1279770..1279977) /locus_tag="ALC57_07886" /note="GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]" /codon_start=1 /product="Ribosomal RNA-processing protein 8" /protein_id="KYN19840.1" /db_xref="InterPro:IPR007823" /db_xref="UniProtKB/Swiss-Prot:O43159" /translation="MEHKIKNKCGVNDMKKSDILMTYSKDDEKTSEVFQELSININNK SENKKKNNRKLELNLEYANKTAVRVDDVKEKNKKLERRVKGSINFEHKMTKIEKLKKI TGKKMKRMSAKVEAQHIKNKDELLKLNKHMRKIKQLEEMLARKSEIMQTLKDRVTTQL KATRFKVINEILCNNNSSQSKHYFKQNPDAFKAYQIGYKWQLEQWTTNPLDVIISSII ELFVYYMLYLDNCRPMDNIIADFGCGEAQLAASVPHVVHSFDFIALNDRVKACDMAST SLQTNSIHVVVFCLSLIGSNLNDYIIEANRILKDNGILKIVEMENRFEDVKDFIRLLR NYGFKNTRKNLFDLFYFMDFKKAKAISTKKTLPPITLKSCSYKKR" gene <1281257..>1282274 /locus_tag="ALC57_07887" mRNA join(<1281257..1281457,1281530..1282009,1282092..>1282274) /locus_tag="ALC57_07887" /product="Protein-S-isoprenylcysteine O-methyltransferase" CDS join(<1281257..1281457,1281530..1282009,1282092..1282274) /locus_tag="ALC57_07887" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004671 - protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity [Evidence IEA]; GO_process: GO:0006481 - C-terminal protein methylation [Evidence IEA]" /codon_start=1 /product="Protein-S-isoprenylcysteine O-methyltransferase" /protein_id="KYN19841.1" /db_xref="InterPro:IPR007269" /db_xref="UniProtKB/Swiss-Prot:O12947" /translation="RKMCREGALSLFCFITAGLISLFPELQFRLGFDIYVAYFTNIWV LHAVQYILINVSALLAFRGFTYQVAVRALFLGYIFGIGILISINAPPSWQVFGIYTTV LASFHYTEFLAIAWSNPATLSIDSFILNHSIAYGVAACLSWMEFIIERHYFNLMKRPS LVCYFGLILCISGEILRKLAMCTAKQNFNHVVQNERRDNHELVTHGVYNLCRHPSYVG WFYWSIGTQLILQNPLCLFAYALMSWSFFHDRVLIEEMTLLSFFGEDYVQYQRRVGTG LPFISGYKIDS" gene complement(<1292332..>1323254) /locus_tag="ALC57_07888" mRNA complement(join(<1292332..1292446,1292962..1293130, 1293389..1293855,1294161..1294468,1294723..1294874, 1295116..1295385,1296058..1296216,1297570..1297836, 1298338..1298598,1298763..1299054,1299120..1299348, 1299635..1300055,1300345..1300899,1301286..1301558, 1302125..1302305,1302376..1302515,1303735..1304176, 1304452..1304734,1304898..1305268,1305584..1305809, 1306114..1306316,1306393..1306686,1307034..1307174, 1307529..1307736,1307810..1307987,1308066..1308190, 1308266..1309139,1309815..1310063,1310162..1310299, 1311431..1311658,1312768..1312830,1313431..1313706, 1313949..1314083,1314334..1314444,1316839..1316985, 1317814..1317921,1321716..1321832,1323218..>1323254)) /locus_tag="ALC57_07888" /product="Basement membrane-specific heparan sulfate proteoglycan core protein" CDS complement(join(1292332..1292446,1292962..1293130, 1293389..1293855,1294161..1294468,1294723..1294874, 1295116..1295385,1296058..1296216,1297570..1297836, 1298338..1298598,1298763..1299054,1299120..1299348, 1299635..1300055,1300345..1300899,1301286..1301558, 1302125..1302305,1302376..1302515,1303735..1304176, 1304452..1304734,1304898..1305268,1305584..1305809, 1306114..1306316,1306393..1306686,1307034..1307174, 1307529..1307736,1307810..1307987,1308066..1308190, 1308266..1309139,1309815..1310063,1310162..1310299, 1311431..1311658,1312768..1312830,1313431..1313706, 1313949..1314083,1314334..1314444,1316839..1316985, 1317814..1317921,1321716..1321832,1323218..1323254)) /locus_tag="ALC57_07888" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Basement membrane-specific heparan sulfate proteoglycan core protein" /protein_id="KYN19842.1" /db_xref="InterPro:IPR000034" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002049" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008985" /db_xref="InterPro:IPR009030" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013151" /db_xref="InterPro:IPR013320" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR018031" /db_xref="InterPro:IPR023415" /db_xref="UniProtKB/Swiss-Prot:Q05793" /translation="MQCSDGSDEDLCVTECPPGWFRCNDGVCLDIKRRCDGRPHCLDG SDEFNCSQCPDGQLPCDNGVCINKNFFCDHNIDCHDASDERNCPESGETGSSGHECHE GSFICNDGSCIPPTAVCDGRADCPHDEDEINCRRGCTRDQFQCANGDCIRADQRCNGF IECSDGSDEPEECEPPKPTPGQCATDQYMCISDRRCVPLSSICNGIPECRDGSDEQNC DREAVCSHEEWRCKSGDCIPQHQRCDRRIDCPYDDSDEMGCHYRAMQRNHSRCSAHEW TCNDGHCIPLHQRCDKRLDCPRDMSDEMDCSYDNYTDGTSDLRLKTYPSEQVIKESRE VVFQCRDEGLLRARVRWIRGNGLPLPPGSRDINGRLEIPNIQLEHAGSYICEALGYPP STSGRQVTVVLTVEKFEQPVTRPPQVCQYDQATCSNGDCIPKSYVCDGKFDCTDGSDE MRCSPHGCEPNEFRCNNKQCVSKLWRCDGDKDCADNSDEENCAPSPPGSPCRYNEFAC SSNKQCIPKSYHCDMERDCLDGSDEVGCSPVYIVKPPPPMVVLMPGDMLVLTCTAIGV PIPEINWRLNWGHIPAKCTTVSTNGTGTLTCPDIRLEDQGAYSCEALNVGGFVFAVPD AIVVVKENGNVCPKGKFNSEAKTAEECISCFCFGVATECRSADLFTYQIPPPFDRHKI VSVETIPTIRIHGDISNQISQIRPLARDGVQLLESFSNDLNVYNVPYFALPENYHGSQ LKSYGGYLKYSIRHSGNGTPNYAPSVILSGNNYILVHKGEEPAPDYENERSVRFFYGD WYKQQGRSEVLASREEIMMTLANVDNILIKVKYDDSPQLDVRLTNIIMDTADTRNTGL GSASFVEECQCPTGYTGLSCEHCAPGYLRRESGPWLGQCYRDEPPCPPGYYGDPSRNI PCQICPCPLTNPSNQFARTCHLGSDGQPTCDCPPGYVGRRCEQCATGYQGNPLIPGDM CVPLQQCDPNGSLSPNADSHGKCHCKQYATGLTCNQCKANTFNLASTNQFGCIACFCM GITNRCVSSNWYRNEIRVSFTNSIRSFSLIESKSTDTPDIVEGIHLNTINREIVYSEF PNRGNNDVYYWQLPSIFLGDQITSYGGNLKYTVRYVPSPGGQSSRNNAADVELISAND INLLYYSRESPEPNSQQSFTVPLLEQYWQRNDGTQADREHLLMALADVRAIRIKATYT THTDEAALSFVSLDTAEKYNTGKARAVEVEECTCPAGYRGLSCEDCDVGYTRAIEGLY LGICEPCNCNNHTNQCDPETGTCENCAHHTTGEYCELCEPGYEGDATRGSPNDCTYRS QRPEPCRCNEAGSRSTSCVDGRCECKRNVEGPECNRCRPSTYGLRAENIDGCIECYCS GVTDQCHESTLYVQQIPMWVYDSHHGFTLTDSTRRDIIDDGFELNVAMNEIGYRYPDS RSRRLFWSLPSVFTGNKVKSYGGNLTLTQHITAYPGAQSYKDQDILLIGNGITLFWTN PVELQPEIPLTYTVPLKEHEWRRLTTEGPRSASRTDLMIVLSNLEAILVRASHSERMT ATYISDISMDTAVENLIENRRATQIEACRCPTGYTGTSCETCARGYYRDTSDRTISYL GACNPCPCNKNEESCEISRSGHIKCHCLPGYTGQYCQDSGVVGEPQTTSTQSPISPPK ITVYIQENEFQIVHTGKTVRYHCTGRSREHESVNIRWEKEGGQLPPDRSVDDSNGLLV IRDVKVSDSGIYVCQVSDGTNIGYKKVTLTVGGTNPVEPRVAISPSYQQVREGEPVEF RCEATGNPPPQLDWIRVHGSMSPEATFYNGVWSLPAASKNDAAEYKCVARNNVGIDEK TTILYVQDNPNKPPPQGLPPTITPSEWSGTSEDVVKLICTPSQHVNVTWTRSGGLPLP YTASQRDGILTITNPTPSDSGIYVCTATSVRGTETSTTARITIMSRREPPLVTVRPFR QEVKQGTVAEVRCITSGEPGLQVKWSKYTETMSSRVQQVGDMLRIINVQVSDRGVYLC RVAGPTGNYEASAIIEVEPREAPVLELYPQDIQTVILGGSADLQCRAKAGFPAPELRW SRVDNRPFASNIEQLPSGLLRLSNITANDGGAYICSASNEVGSTSVIAHIEVQSMPVI TITPQHGILQVKRGSRVRLMCSASGHPQPNVAWSKYVNGITIQDTYSRTAATPLSAVY EIFSVSPDDEGSYTCTATNAVGIAEERVQIRIEDDDDYVPCTGDRGDIPCDDDRQRPQ PDSRDPNQTEGGVLIPKDYLRIPDGGKVEMRCQVFGPDGDHIYLDWKRSDHRSLPEGS TVHNGVLSIPTVDRNAAGEYICLGLDPAGTVLFRAKSHLEIISPPRIELNPTRQTVGP GENPSIICTATGDEPLHIEWKTIGRPLPYSVSDSGGILQFHGITYSDAGKYVCKATNA AGTAEAVAEVLVNEHPYDNARIRAEQRDVVTHAGNSVRLRCEVRERATIHWSREGLPL PANARIGEDYLELTQVKPEDSGRYICQIQTSRGVSSDYINFNVSLYRSQCRHWEYQCR SLQCIPMEYFCDGYVQCNDGTDERFCRNARYRQYLQRQRAAAVPSVSIEVSQDPINIG DTVDIHCTYTGTRNPRYRWTRPNHVSLPTNAQEYGNVLRLTNVVVSDSGPYRCTVDTP EGVLAKDFNLIVHGGILDEPAIETKLAPYGSSLEMDCRLDLDPPIQFQWNKLGGLLPR DSQTYENKLKLTNVKAEDAGTYICSGNNEESRVEVPTVLVVTGVVPNFSQAPESYIAF PPLPDSYLKFNIEISFKPESYDGILLYNDESGHGDGDFIVLSLNNGYPQFKFNLGSGP AVIRADKPVTLSEWHTIKIQRNRKEGTMLVDGEGPYKMVALGRRQGLDLKEPLYIGGV PSYSRINVQAEANTGFVGCISRLVLGEKQVDLIGDQTDSVGITTCETCAENPCNNGGV CQEAATKNGYTCLCRAGFSGKHCDNIGQSCYPGACGEGECIDKEVGGFHCYCPIGKTG PRCEHSVNVYDPAFHDDRAFIAHETPKALRRERESSTTTHSRSRLRNAQIRKPRSRPH HHNNLHHTKH" gene complement(<1329703..>1333056) /locus_tag="ALC57_07889" mRNA complement(<1329703..>1333056) /locus_tag="ALC57_07889" /product="SCO-spondin" CDS complement(1329703..1333056) /locus_tag="ALC57_07889" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="SCO-spondin" /protein_id="KYN19843.1" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR023415" /db_xref="UniProtKB/Swiss-Prot:Q8CG65" /translation="MNMQPVTTESADRLTIKPAVTIGNSILETFPEETQRRRFPNSML QKPSAYLIQITSKSKDNNSSSQYVKFGRFHNLDANCSNAEVYHPTVNQTLKRSSNESR IPKPLKLSDSLVRSLQLFQQKNISLKNFGLQSVNNRDKTRKKMSGSNPDCASKQSNTC NVDATIMILGPSKKDRYVTEKNISKSKNSNIRTVIEISSKIDMEYQNGDKIKRTPTKL ENNTSNKNDIDNTKTIHRSKNITVEATKNIYEEIVTENPLMVKKKSTDTVTQRIDNLI CKFIKAKHMVCRQSDSTEVSIKPIYTTSKITTVTNDANINRNFNMTDVGNSKILRKNQ HRRHGSAYQKYYDKYLRNLITSSTMKAEKRNMLENVTGFIYSDVFNNTHGQSNLRENY IETKNNNPNKENFFGYEVKKDSKVSNYYNKYLKHRVTPSKRTAPVTVSTTKIEEYNMT NMKYDRGQKAVLSVLEEMSATAKPNKNDYSSIKTEKLLYELKSPKAEIRHRYFPTINV NDVNMISNLSTSNHNATQQNQSNEKYNKTHKQSNISFEKCCDENLIQSNEKIDSGLIN SDETPESIPVENTNTISKELHESREILEEKSEDDFDVVLFNFTTTRVPEIVTRDANEP REKTSTERHGKRKHKSRHNGRKNNRPKKRRKNHAKRKRKPTLSVAWKIDEPTSVDYGN AYSSERVKTLSPNDLEYNKADDNRNTSTGGNDWYLTDEITTEPFKIEFSNADESVSKH PTEDSIDDEFQSEETNVDLVTSSTISYLSTTSNEKISKKCKTLITTTTESNWLNWWTN DNKKADKESTECEEDVTSLPTTSDSIEEETSYYSTSVSDDFSIYNTISTLDSTTLTWE YFSKEDKNVSDEEISTTYSMIKDEENNKKKVMISKSMLNEESDKNNEETQSWESTTHS RGTTHNVNLDLNSEEEEDRLDKSISDEDNEIDNGIVEIIEDYEIDNCNETQHACDKYT CIDEDQVCDGIVDCLNANDETDCDYIYSKRWEEHQRINNKRIDFTSNTVDMSHLDGCS PFEHPCDSMCINALHVCDGKRDCLDDTDEENCTKGIPHVENNILREASHFTLCSRCKK YLALDGASRESQAIVTSFQDDLSSSLYRT" gene complement(<1333827..>1355541) /locus_tag="ALC57_07890" mRNA complement(join(<1333827..1334095,1335723..1335836, 1345163..1345169,1346319..1346358,1348410..1348419, 1349157..1349219,1355493..>1355541)) /locus_tag="ALC57_07890" /product="Low-density lipoprotein receptor-related protein 1B" CDS complement(join(1333827..1334095,1335723..1335836, 1345163..1345169,1346319..1346358,1348410..1348419, 1349157..1349219,1355493..1355541)) /locus_tag="ALC57_07890" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Low-density lipoprotein receptor-related protein 1B" /protein_id="KYN19844.1" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR023415" /db_xref="UniProtKB/Swiss-Prot:Q9JI18" /translation="MHVACHANIFSFISPLIINFLRSEQLNAVYKGCSSKSELRDCFS GGFTAMKIVKRQVTTCSGDQFRCLDGICLSIDKRCNGIHDCRNGEDESQCGCGDTEFR CTDGRCINYVLQCNGVNECSDGSDERDCGNYATPHLPTRSFFYTILKHMYTLHHTCAR ARDKSFNKYIHNVASCVWTMYTG" assembly_gap 1368464..1368536 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1407716..1408396 /estimated_length=681 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1411399..>1415313) /locus_tag="ALC57_07891" mRNA complement(join(<1411399..1411592,1412492..1412608, 1413617..1413877,1415058..>1415313)) /locus_tag="ALC57_07891" /product="Prolow-density lipoprotein receptor-related protein 1" CDS complement(join(1411399..1411592,1412492..1412608, 1413617..1413877,1415058..1415313)) /locus_tag="ALC57_07891" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Prolow-density lipoprotein receptor-related protein 1" /protein_id="KYN19845.1" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR023415" /db_xref="UniProtKB/Swiss-Prot:Q91ZX7" /translation="MNTDWWHDSLIPPTFDAMNAHEHNTRHSNTAGEKDTQPECDQMT ELRCRSGECVPLESRCDSVSQCNDSSDEDNCPTDSLNKTRDDFEYTTVASQHPSLHFP TENTHTVNPEVPDIDDKQIEESTLRSSSNKCRADDTVRCHDGSRYICSVQQCDGVLDC DDGGDEIDCPHPGCSAGEFACDVNRCILESQRCNFVEDCQDGSDEHDCNYPEPSSFGT LFHPVRTSLIQIDGLSATRIRPDATTLIQIGLPLVQPVGVVANFRRRVSSTNGEANP" gene <1412460..>1418293 /locus_tag="ALC57_07892" mRNA join(<1412460..1412617,1413538..1413793,1414836..1414913, 1415021..1415150,1417482..1417596,1418155..>1418293) /locus_tag="ALC57_07892" /product="hypothetical protein" CDS join(1412460..1412617,1413538..1413793,1414836..1414913, 1415021..1415150,1417482..1417596,1418155..1418293) /locus_tag="ALC57_07892" /codon_start=1 /product="hypothetical protein" /protein_id="KYN19846.1" /translation="MLLTTKIKIFTWIIAVMFVATILTILHKVASLRFQYTSVYVARE LASTTACKTMVRGGSSRSPTFSARSLAKVNRLNLYLDAGNRSRHHRHRSPERHRTAVP NRCNDCRRDSVPCHRRGTCSKTTSAWTPRSAYRRCPIMLMFTTKLMLILILQSTVYLH IGHIGEDHSVRSSAYLPSRVLFNESVGQLSSSELSLHCDTLSQRDSKETYVLCHQRCD VCFLSWESNPLRLRCLRSLLNQPNLHHRDVSYLICIVIVFVLLENQSLDDTDTRFGIW HFRLIKSMIPFISNV" CONTIG join(LKEY01033366.1:1..2473,gap(1727),LKEY01033367.1:1..4226, gap(214),LKEY01033368.1:1..694,gap(667),LKEY01033369.1:1..287, gap(79),LKEY01033370.1:1..367,gap(50),LKEY01033371.1:1..315, gap(296),LKEY01033372.1:1..32211,gap(16),LKEY01033373.1:1..16694, gap(139),LKEY01033374.1:1..12116,gap(471),LKEY01033375.1:1..1913, gap(23),LKEY01033376.1:1..3415,gap(175),LKEY01033377.1:1..17389, gap(1757),LKEY01033378.1:1..1574,gap(1128),LKEY01033379.1:1..258, gap(462),LKEY01033380.1:1..2047,gap(712),LKEY01033381.1:1..69578, gap(38),LKEY01033382.1:1..28956,gap(50),LKEY01033383.1:1..388, gap(302),LKEY01033384.1:1..10983,gap(223),LKEY01033385.1:1..8036, gap(425),LKEY01033386.1:1..8283,gap(361),LKEY01033387.1:1..70787, gap(323),LKEY01033388.1:1..2475,gap(116),LKEY01033389.1:1..25188, gap(122),LKEY01033390.1:1..10514,gap(81),LKEY01033391.1:1..12102, gap(16),LKEY01033392.1:1..39062,gap(75),LKEY01033393.1:1..52032, gap(648),LKEY01033394.1:1..45176,gap(271),LKEY01033395.1:1..6033, gap(105),LKEY01033396.1:1..59122,gap(206),LKEY01033397.1:1..1229, gap(10),LKEY01033398.1:1..36751,gap(684),LKEY01033399.1:1..69383, gap(229),LKEY01033400.1:1..92610,gap(26),LKEY01033401.1:1..28596, gap(387),LKEY01033402.1:1..3396,gap(175),LKEY01033403.1:1..545, gap(106),LKEY01033404.1:1..57091,gap(378),LKEY01033405.1:1..9551, gap(123),LKEY01033406.1:1..1859,gap(29),LKEY01033407.1:1..14909, gap(497),LKEY01033408.1:1..12311,gap(55),LKEY01033409.1:1..12146, gap(10),LKEY01033410.1:1..6555,gap(92),LKEY01033411.1:1..91193, gap(1813),LKEY01033412.1:1..20537,gap(1027), LKEY01033413.1:1..16706,gap(113),LKEY01033414.1:1..9633,gap(165), LKEY01033415.1:1..73662,gap(90),LKEY01033416.1:1..9368,gap(42), LKEY01033417.1:1..103703,gap(895),LKEY01033418.1:1..133811,gap(73), LKEY01033419.1:1..39179,gap(681),LKEY01033420.1:1..11969) //