LOCUS KQ977754 1356219 bp DNA linear CON 25-MAR-2016 DEFINITION Cyphomyrmex costatus isolate MS0001 chromosome Unknown scaffold344, whole genome shotgun sequence. ACCESSION KQ977754 LKEX01000000 VERSION KQ977754.1 DBLINK BioProject: PRJNA292630 BioSample: SAMN03982885 KEYWORDS WGS. SOURCE Cyphomyrmex costatus ORGANISM Cyphomyrmex costatus Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Cyphomyrmex. REFERENCE 1 (bases 1 to 1356219) AUTHORS Nygaard,S., Hu,H., Boomsma,J. and Zhang,G. TITLE Cyphomyrmex costatus WGS genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 1356219) AUTHORS Nygaard,S., Hu,H., Boomsma,J. and Zhang,G. TITLE Direct Submission JOURNAL Submitted (07-MAR-2016) China National Genebank, BGI, Beishan Industrial Zone Building No. 11, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Date :: FEB-2012 Assembly Method :: SOAPdenovo v. 2.04 Assembly Name :: Ccosl1.0 Genome Coverage :: 92.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1356219 /organism="Cyphomyrmex costatus" /mol_type="genomic DNA" /submitter_seqid="scaffold344" /isolate="MS0001" /isolation_source="Nest" /db_xref="taxon:456900" /chromosome="Unknown" /tissue_type="Whole body" /geo_loc_name="Panama: Gamboa" /collection_date="2011" gene <1547..>7146 /locus_tag="ALC62_09115" mRNA join(<1547..1722,2050..6079,6290..6483,6548..6828, 6923..>7146) /locus_tag="ALC62_09115" /product="hypothetical protein" CDS join(1547..1722,2050..6079,6290..6483,6548..6828, 6923..7146) /locus_tag="ALC62_09115" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_component: GO:0005615 - extracellular space [Evidence IEA]; GO_function: GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00053.1" /db_xref="InterPro:IPR001599" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR002890" /db_xref="InterPro:IPR008930" /db_xref="InterPro:IPR009048" /db_xref="InterPro:IPR011625" /db_xref="InterPro:IPR011626" /db_xref="UniProtKB/Swiss-Prot:Q6YHK3" /translation="MLVWILLLFLASGNGQFTQESTESTPRLPWNRYDEWDQNAGFGF RNPSGQNENVIIKDSTYFIVASRMVRPGQVYRIAVNILHSPLPMMVRTSIQRNGVEIA ADHQEVKEGIPETLMMRMPPTSVEGDYKLRVEGLFNSLTGGQAFLNETRLIFSQRSMT IFIQLDKPVYMQGDTVRFRTIPIDTELKAYDSPVDVYMLDPNRRIMRRWLSRQSNLGT VSLSYQLSDQPVFGDWIVQVIAQNQVEEKTFVVEEYYQTRFEVNVTMPAFFFDNDPYI YGIVQANYTSGAPVKGNLTLKASFKPLDRIRNPSVTIESVERYFNFNEYYPSWFRILN FFEERIPVLRFFNGTYHFRYPMQELLGFAPSIDGMEVTVVATVGERFLDEVIVGYSKA RIFNSTTKIRFLGGSPQVFKPAMPFTLNLVASFHDNSPLRPTQLRDGMMEIRADIEMR SGGRRNIDIQYPKASPEHADAWVIKMDLRKQLGLESDRANQILDDITSMKVYAHFTDG EGYRAQTELLLLAHESPNMKHIKISTSTENPKVGQYMIFHVQTNFYIDVFNYLIMSKG IILLTGEDNMQHNVKTFAIPLSPEMAPVATAVVYYVGRHGEVIADSLTFPVNGISRNN FTVFINNKKARTGERVEIAIYGEPGAYVALSGIDRSFYTMQAGNELSYANVITKMAHF DEETNGTHTHTWQYHDGDPDEMVYFPSSTFGIDVNRTFDYIGLIVFTDAVLHRRPDLC NRTQGFGECLTGRCYRLEKKCDGVFDCEDGTDEARCVERNATDLAQFRKERFNRIQRH YENVWLWKDINIGPHGRQIFNLDVPRRPVHWMVTAFSMSPSIGFGMLPKALEYTGVLP FYINVEMPSHSRQGEQIGIRVSVFNYMRYNIEATVVLAGSKDYKFVHVEDNGIVQSYK PRTSFGEHQFFIWIPAQDVNIVYLPIVPVRLGDITVHVYATTLIGRDSVTRNLHVEAD GVPQYRHQSILLDLSNRAYIQEYLHVNITETPIISYDENRYYVFGSNKATISLVGDVV GPIFPTMPVNATSLMNLPMDCAEQNMFSFAANMYTTLYMRLINQRNRTQEKESFYYMN IGYQKQLSFMNPDGSFSFFRTDWNQSMPSVWLTAFCARIFQEASFYEWENYLYIDPAV ISQAISWILKHQTLDGAFYEVTWLPDRKMNSSLNYKNDLIAHRNISLTAHVLITLQSV KDLTGGLGSQVALSAANAIKWLERNLKLLEERGKPYEIAIVAYALMVSKASTAEQAFN ILASKLQREGEYTYWGREYVPPPPTKMENQKQFRLPRLPFNYDSENIETTSYALLVYV ARQEIMLEPIVRWLNVQRLTDGGWASTQDTVWAMKALMEYTVRSRIRDVSSLTVDIEF SSVTNKTKTLTVNHKNLAKLQTIEIPQAWGIVKVQAKGAGYAILQMHVQYNVDIKNFQ TEPPIKAFDLVTRANFHGRNQSHISYLCCQRWTNLNESARSGMAVLDVAVPTGYIIQQ QNLDRYILSKRVRNLQRARFQERKVLFYFDYLDNEETCVNFTLERWYPVANMSRYLSI RVYDYYAPERFNESIFDALPTYTLNICEVCGSSQCPYCPIYNAAMLLSTPTGFLLIAS LIVTITRYFRTQQFGIDLLTACFI" gene complement(<14750..>37687) /locus_tag="ALC62_09116" mRNA complement(join(<14750..14775,14876..15302,15539..15698, 15832..15980,19777..19992,21909..22038,26500..26652, 34648..34746,37377..>37687)) /locus_tag="ALC62_09116" /product="Synaptic vesicle membrane protein" CDS complement(join(14750..14775,14876..15302,15539..15698, 15832..15980,19777..19992,21909..22038,26500..26652, 34648..34746,37377..37687)) /locus_tag="ALC62_09116" /note="Synaptic vesicle membrane protein VAT-1 homolog-like protein; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Synaptic vesicle membrane protein" /protein_id="KYN00054.1" /db_xref="InterPro:IPR002085" /db_xref="InterPro:IPR002364" /db_xref="InterPro:IPR011032" /db_xref="InterPro:IPR013154" /db_xref="InterPro:IPR016040" /db_xref="InterPro:IPR020843" /db_xref="UniProtKB/Swiss-Prot:Q9HCJ6" /translation="MAEDKNETSPSAEGEKPPQETAASSPPAKEEPPTKERKEDEKKV EENGEGEKPKENGEEKATPEPKDMRAIVLNGFGGLKSVKALKKPEPALGEGEVLIRVK ACPRHSSILVVCAFTRFACERELHLGVHAPFVVKGRGSRTLLRLVTSEPSPCPCTLAS LPLFFFKEPLNKSESSNHGYSGSHESLSGLNFQDLMARQGAIDSPPKTPFIMGSECAG DIEQVGEGVENFKVGDRVVALPDHKAWAELVAVPATSVFALPPGMSYLDAAAITMNYT VAYILLFELAHLTPGKSLLLHSAGGGVGQAVVQLAKTVKDVTIFGVCSKSKHEALKNA GTIDYLLERGADYSNEVRKISPEGVDIVLDCLCGEECNKGYALLKPMGKYILYGSSNV VTGETKSFFSAARSWWQVDKVSPIKLFDENKTLSGLNLRHLMYQQGSHAFVRRAVNQV YTLWSEGKIKPAVDSTWALEDVPEAMQKMHDRKNIGKIVLDPSLEPKPKPATPAKGKA KDKKAANQEEKKASSVESEEGEKKKEPELTNGTSEDKSDSDSKEKESS" gene <47765..>49675 /locus_tag="ALC62_09117" mRNA join(<47765..47843,47920..48126,48569..48895,48977..49094, 49180..49366,49448..>49675) /locus_tag="ALC62_09117" /product="Abhydrolase domain-containing protein 4" CDS join(<47765..47843,47920..48126,48569..48895,48977..49094, 49180..49366,49448..49675) /locus_tag="ALC62_09117" /codon_start=1 /product="Abhydrolase domain-containing protein 4" /protein_id="KYN00055.1" /db_xref="InterPro:IPR000073" /db_xref="UniProtKB/Swiss-Prot:Q8VD66" /translation="SWIWGWFSWSGSSSTMLRAAEKKILSCLKTAYRGWFVDIGPVVG PADKIWTISLNEESPKVPIVLLHGLGAGVALWCLNLDALASQRPVYAIDILGFGRSSR PVFSNEAQKAEEQLVSSVEEWRREMQLENFVLLGHSMGGFLAASYAMQYPERVKHLIL ADPWGFPEKPSDTMKTHIPFWVKAIAFAVQPLNPLWAVRVAGPFGQWLIEKTRPDIVK KFTPLLKDDTAIISQYIHQCNAQTPSGESAFHAMMHGFGWAKNPIVKRMDKLNDNIPI TLLYGSRSWVDNSAGETIKQYRSSSYVNVQVITGAGHHVYADKSETFNKYVSEACALS DSISHLTSSNVRPYKPISDQEIDVNLPKEALEEQRSEEKNLNTESKI" gene complement(<50384..>51368) /locus_tag="ALC62_09118" mRNA complement(join(<50384..50734,50808..>51368)) /locus_tag="ALC62_09118" /product="Putative ribosome-binding factor A, mitochondrial" CDS complement(join(50384..50734,50808..51368)) /locus_tag="ALC62_09118" /note="GO_process: GO:0006364 - rRNA processing [Evidence IEA]" /codon_start=1 /product="Putative ribosome-binding factor A, mitochondrial" /protein_id="KYN00056.1" /db_xref="InterPro:IPR000238" /db_xref="InterPro:IPR015946" /db_xref="InterPro:IPR023799" /db_xref="UniProtKB/Swiss-Prot:Q6P3B9" /translation="MNINLTDKISPSIHVQRRMIIRDKLFMQHITDMMSMGQVFDIIK ENIEITHVKITRDFKYVNVFYIPSSNSSVNQEALQNCARIIRHELSQLRIIGIVPPIQ FVEDKHYIREKEVEKRLAMINFEETNEILSEQMESDIFDVNSVDQISYKKKPVVNDDS KTDEFYIQLPIMRHDVLGLNHHLIMSRITSAVSKSKKAEQRRIWNMNTDTDKSDPVSK EVEILTQEEQRKIFSDFLIKRRRETRRMNRLNNQKKLLNKCDLEAINNEESDYEDDID VNNENVDDENFYDDYNDDDDFQNDMRK" gene complement(<52887..>54742) /locus_tag="ALC62_09119" mRNA complement(join(<52887..52915,53020..53451,53586..54483, 54641..>54742)) /locus_tag="ALC62_09119" /product="E3 ubiquitin-protein ligase RNF8-A" CDS complement(join(52887..52915,53020..53451,53586..54483, 54641..54742)) /locus_tag="ALC62_09119" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase RNF8-A" /protein_id="KYN00057.1" /db_xref="InterPro:IPR000253" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR008984" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR017907" /db_xref="UniProtKB/Swiss-Prot:Q7ZX20" /translation="MEHLKRASDEEPKVLEPVLINTDTNDRINIDKNEFKIGRARDND EIILDVMISRRHCIFRCIGQDEWMLKDLSSSGTFVNGNAIGSGEVQNVCSGDIIQFSP NETFKYVFTLAEKEHCVKKARIDEKILDTVLVKQRTFAENQECQRKELKNMLEINQKE QIKLNQQLENLLSQQAMAKDDKENLLKQITALEEKIKACNSQEEDLKNMYSQLLQKLE NERLQFEARLNEEKQKWQEALDMSKQEKEMLEIKMKDQMKKWREEQQAEWKNMMENKV KEEKNIQARLMNEKTVLEEKLKSHVNEKTMLEEKLKETEKALKEQEAKTEISQTILGV NTSNESIASTSECIFLNFNGDQIEVPQYEIIDTIDLTEISQNMLETNINQSILGKVSN IMDEQLTCSICSELFIKATTLKCTHTFCQHCINLWNKKQKSCPVCRKPVVSMIRSLVL DNFIESMIDNLPTELKNRRNEIIQEREVITTKRRMY" gene complement(<56081..>58544) /locus_tag="ALC62_09120" mRNA complement(join(<56081..56464,56542..56698,56788..57094, 57155..57284,57359..57665,58285..>58544)) /locus_tag="ALC62_09120" /product="hypothetical protein" CDS complement(join(56081..56464,56542..56698,56788..57094, 57155..57284,57359..57665,58285..58544)) /locus_tag="ALC62_09120" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00058.1" /translation="MSELYGESVNGTKIEEHLEESIVSQDDYKKIKQENENFRQELHV LRLKLETSDAFIRDLQDSEEILENNLKEYVRQTTVSSAEEKEKYKAKQQEYENHIINL ETNQASSELKIKELQEELKKYKDLVNNQLHNTKADNLTVYKEELREVHMLLKNEKKKF LEKEKNEMALMDKLAHTEVQCKELQLDLKKTTKDLVEKNKELENARETAKELAIKLEE LESSNIIPASDMCKGNSLFAEVEDRRQMLLDKMKVLSTKYNEAKQALDLKTSEIKFLR AEKIAISKKWETDIIDTLQENADLLDKYKNRIFDLESKLKAEMRKNDEVEETQSTNNF NYAQLLLTAKKKELKELNERIEKQTMQMLMQDEVNNNISRQLRYWQSKAKFLEAQNRA IKDQLEMQDKYGNKILLESIKNCTFSGDVNFEKICGDSLTPHEFVPENILKSELVEQG NSTEVIEKPVVDSANKQRENRRFVDFTSDTKNSDCESKPLKKYEKTKKRDYPVIIHTI DNDNLN" gene <62428..>63037 /locus_tag="ALC62_09121" mRNA join(<62428..62727,62756..>63037) /locus_tag="ALC62_09121" /product="Protein yorkie" CDS join(62428..62727,62756..63037) /locus_tag="ALC62_09121" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Protein yorkie" /protein_id="KYN00059.1" /db_xref="InterPro:IPR001202" /db_xref="UniProtKB/Swiss-Prot:Q45VV3" /translation="MALNQDVVEQLSKSNPVVRVDQNSESDLQALFDTVLKPDSKRPL QVPLRMRNLPDSFFNPPSTGSKSPSISHSRENSADSAFGAAVPATPNGGSVPNGGTNG TANAIAAAAAVAAAAGLTVSHPRAHSSPASLQQTYASAQQAPQHAPQPHARHHHHQKQ RSYDVISTVDDLGPLPHGWEQARTPEGQIYFLK" gene <73520..>76829 /locus_tag="ALC62_09122" mRNA join(<73520..73665,75076..75284,75766..75950,76044..76230, 76557..76642,76734..>76829) /locus_tag="ALC62_09122" /product="Yorkie like protein" CDS join(73520..73665,75076..75284,75766..75950,76044..76230, 76557..76642,76734..76829) /locus_tag="ALC62_09122" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Yorkie like protein" /protein_id="KYN00060.1" /db_xref="InterPro:IPR001202" /db_xref="UniProtKB/Swiss-Prot:P46937" /translation="MTSHARAVQNRLPPVPLPLSEAELRHGKSDVVATKSIVLSISYI CISFTHLTRTTTWEDPRKTAAAASVAAVAAAVESSKSNALGPLPDGWEQARTAEGEIY FINHQTRTTSWFDPRIPSHLQRTPASGAMLPQNWQLQQPTGIQNNQNLQACQKQKIRL QSLQLERERLKQRQQEIMRQQQEMMLRQSTTDAVMDPFLSGINEQHARQESADSGLGL GTAYSMPQASDDFLNIDENMDGTSDGGAPMDTPDLSTLSDNIDSTDDLLPSLQLNEEF STDILDDVQSLINPNTTKPENVLTWL" gene <83108..>98459 /locus_tag="ALC62_09123" mRNA join(<83108..83254,84549..84637,98273..>98459) /locus_tag="ALC62_09123" /product="hypothetical protein" CDS join(83108..83254,84549..84637,98273..98459) /locus_tag="ALC62_09123" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00061.1" /translation="MSIPLSFLIGSPPIDDEQSISSEVTNTSPRGSPVNHGENRVNRR SAEHDNLGTAGFALLDVHHGEVARSEFTHRTCVREKLGYDSHGSLLRSASGQLSVVCP KRREPFASQPASMKTGWHTVIDKAKVLPGSKTSPVSLL" gene <112436..>138346 /locus_tag="ALC62_09124" mRNA join(<112436..113990,123043..123101,123241..123376, 123481..123618,123847..123981,124195..124406, 124993..125206,125765..125894,126146..126360, 126830..126936,129652..129776,130281..130416, 130681..130824,131713..131940,132008..132282, 132351..132631,132849..132989,133076..133228, 133588..133817,134027..134222,134305..134505, 134666..134857,134987..135229,135395..135647, 135721..135841,136050..136233,136911..136995, 137233..137329,137741..138022,138191..>138346) /locus_tag="ALC62_09124" /product="Adenylate cyclase type 10" CDS join(<112436..113990,123043..123101,123241..123376, 123481..123618,123847..123981,124195..124406, 124993..125206,125765..125894,126146..126360, 126830..126936,129652..129776,130281..130416, 130681..130824,131713..131940,132008..132282, 132351..132631,132849..132989,133076..133228, 133588..133817,134027..134222,134305..134505, 134666..134857,134987..135229,135395..135647, 135721..135841,136050..136233,136911..136995, 137233..137329,137741..138022,138191..138346) /locus_tag="ALC62_09124" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO_process: GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO_process: GO:0035556 - intracellular signal transduction [Evidence IEA]" /codon_start=1 /product="Adenylate cyclase type 10" /protein_id="KYN00062.1" /db_xref="InterPro:IPR001054" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q866F4" /translation="EYIEHVIAHSTFVKSLYVENDSLNEYADDEEYDDSGNELHSKGK KRNKTSKPKPCSKCDFTAKTKLALWLHLRQHFTQEECSGFVCTSCPFATTLKHHMTFH WFSAHDDFKAFMCTECSYACVSKSMLTSHMKTHSEVYQYNCGNCSYKTKFCNAMKKHL KDNGHQAGLVLNPDGTPNPFATIDVYGNKRGPRRKTFIEEKKELTDTIDDMPTNLIMT PPTISSISTSSASVLTTPISSSTILDLPESNMALMSPVRMPSPRSPIQTVQRSPVRIP TPITPHPIIANMLNDFFNKLKNQNGFNRQLLLENSPFNFLCHLLFQDLATRSIVDDKE QGQIFRLLQNVYKYLTNDTEHVASISDTKDELPVNARIDEPSTSTMPISESQSAMEVD VNLDQPLDLSMSAMVKREEISHQPQSTSFSKRKRKAVKLEYSTINEKKFHIDDNAVQT RNTNQICTESSLSALLTASQSDLQENNMTHNINIYRTSFICYHCCIIFANEIMYAVHM SFHQTKNPFTSWTPDLFGPIFKKKSLTVKQALDLLNVNEQIHRMATFVPDEIIYEDLS EKSLRSFRAVLMFLNISGFSTLYKKYIHNKNGGCLVLTRILNDYIHIVVREVYCSKGD ILKFSTQGLLAAWKVRDGEFMFDAVQNVIARAMSIQDSIAVLKDINGIYKVNVAISAG DVKFSVIGSDEVRHFVMCGVPIEEIKDAKKVSLPNDLVLSLSAWQHCQPSQYEYVIKN PYNIKIIKALKQLDIKSTYMTSTLSSNHVNTNHEPSTDEKFIIDAVRPSSPYRAHLIT INGESQTEIANNKEKASTGESLRFLAEIKRITVISINIIPDEKILDNELILLIDKCFI LLHSIVTPYGGCINTMDLYEKHILFCIVFGIRGYNNENQFKIDETCKNGISCATHILQ TVKSLEGIKGAFVGVSTGIAYCGVIGHIARRYYTIIGPPVDKAIKIMDISYNKVSCDY DTVLHSHFRKDQFRSRGIKTLQRLEKYHIFEYLGDAPAQKDIALSLDYGYPILGRLQE IEYFNDILDDIGVTNRKYAGLLIEGIERSGKSRLLDAFVTSVCNRQIRPIKLSLHATY AEKSYSVIYHIILQILEAEDCETVEEREKELLNKLGDVLALEDLCYLNILMRVRFPLS DSYYSDTDWQRHTKTINIFKAILKQAMSLFYFLKIKICILLDDIQHLDPESWQFLSSA LDNCNVVLAMTVLKHHSWNDLSHVEAEIYKDKRLTNYNLLGLTVDLLPIFACQFLNVL AIPQKLCRILQRRRDGYLGWCEALLTSILQSNGLDFVKISPSEALKLNLIFPNGTLVT KLPIDLTPEESAPPLSWSQMSLLDVCVTNENFFKITSRDRDITELRNEIYNRMNLYEQ DFIKCAATLGRVIKRSMIENVMLNAIPLHTIKTVSEMIRIRILECASLQRRDFHTEDL IFCIHKKRQTFSDMHHSLSCNCHHSRAVISRHSSSLYGHCKMLEFKVNAFRKMIDNIQ TDKEKQEHHTRAARIYEVDARNCHSCGSGRFLRILSEDIFKELKEDISHLKPRASLIR RRTFIEGKWTMKKPRIHERSARTAAAEKQPDSIDICRVSIMPSDINDEEDEVVLENGD NDRINITFGKKSTSIFLETTTDLSHPSFLVKFSHIDYRNCQCDNIISHLFWKLHHHIE ESGEIDKVLEFFIQYSAGIIQIAQPLYAIKLLSIAAKRSKAVEVEELIDKDTENSITN KGIILTLMGDAHSALGNYDQAKKYYLLAVKLRGTPPKEKGICYNIMLKMFCKLQDPPH YYTVDEESKRLAVKKLELASYLRRLCAGFIVQNKLKTAQSFALRSFKLAFLSVNSFLE KGEIYLATVRVLHCTRNIKLIQHIERLMLITIQRKAVWNDAEEISMVANIYLTMYQIR VLRGKLEEAVHIGIKVLKISKTLHFNKLTLIIMPSLIQIMLWTRRVNVAVDLMRELYF LADEDMDLSAKTWYYALSLDLMLDAGIVLESYETSYNYYEKFIAYRSKFCVWRDPQSL FRLLTGLWMYQLRMGQTISSVFACSAEEYVKDVTWHDFSRILTCSKGYECYLLLLLRC INTKHSDELQNIVQNISKIRKCLKNISKHTTIIKPRFYLLMAYFNVLRGRKSNTWIYL HKAQKFAIVQGNQLMMAWIIQNRRTWREKIYNNMAQYWLEYIGSTDIVPWQYIRNFNI DTWSTILFLLPVPDIHL" gene complement(<139728..>154599) /locus_tag="ALC62_09125" mRNA complement(join(<139728..139892,140403..140601, 140898..141205,141392..141521,142559..142784, 143387..143400,143880..144105,145523..145716, 146116..146157,146748..146879,147470..147519, 147640..147809,148148..148302,148578..148633, 149164..149479,151223..151318,153367..153541, 154494..>154599)) /locus_tag="ALC62_09125" /product="hypothetical protein" CDS complement(join(139728..139892,140403..140601, 140898..141205,141392..141521,142559..142784, 143387..143400,143880..144105,145523..145716, 146116..146157,146748..146879,147470..147519, 147640..147809,148148..148302,148578..148633, 149164..149479,151223..151318,153367..153541, 154494..154599)) /locus_tag="ALC62_09125" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00063.1" /translation="MQAVRDDIRQAIMSRSFKAENVYDISRPDSPLRTPRCQRNTPRS ARASRNEAVLEFECPEEFGYYPHPRDCTQYYVCVFGGALLESCTGGLMYSHDLQTCDW PRNVGCPEGDSSNKEAEEDPLLERSAKLETLQEQQHQQRQQLRDQQQQQQQQRPIQRQ PITITTASPPVSQITERQLRRQHSRTNYHDDEYGPASEVENDRQQRVYRGQPSTIGQV QRDRDGLRRNIISGREKDSLVSSRAQAESHYRTPVPTTESSRLAKTLASTVAPVLSKA YYSDPDQSYPYYTIYDDDVSVYKDDDYNQYTINQSVPVQQPNVKISEVNTKQYQKPKK VAVNEADKYNLNHDIQDYDIYENQAQLNKNKFRISDGQQFRTNVLSHPVVHVTTPNVI VDTFIPLTTSTQTPSTTGRPYTINAPSRDRPQQIHRGTAPPRSRPTLKPSTEIVSKAQ EFIDIYRYPPVRPAPIYPTPQVDKPAAKCRRDVCLLPDCSCGGSDIPGGIPNEQTPQI VLLTFDDAVNDLNKPLYSELFENGRKNPNGCPIAATFYVSHEWTDYSQVQNLYADGHE MASHTVSSMNLCEYLPEEIPQIVLLTFDDSVNDLNKGLYSDLFEKGRKNPNGCPISAT FYVSHEWTDYSQVQNLYASGHEIASHTVSHSFGEQFSARKWAREVAGQREILSAYGGV KLEDVRGMRAPFLSVGGNNMFKMLWDTNFTYDSSMPIYENRPPSWPYTLDYKLFHDCM IPPCPTRSYPGLWEVPMVMWQDLNGGRCSMGDACSNPPTPDGVYKMLIKNFERHYTTN RAPFGLFYHAAWFTQPHHKEGFISFLDTIVAMDDVWVITNWQAIQWIRNPTPLALLHT FEPFGCHYPDRPKKCNNAKVCNLWHKSGVRYMKTCQACPDIYPWTGKTGIRSSRIDNE VDAHE" gene <184610..>196926 /locus_tag="ALC62_09126" mRNA join(<184610..184844,188161..188198,190443..190539, 190991..191055,191114..191208,193960..193975, 194107..194154,194196..194344,194407..194626, 196894..>196926) /locus_tag="ALC62_09126" /product="hypothetical protein" CDS join(184610..184844,188161..188198,190443..190539, 190991..191055,191114..191208,193960..193975, 194107..194154,194196..194344,194407..194626, 196894..196926) /locus_tag="ALC62_09126" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00064.1" /translation="MLRDFIFSPSHTANVSRRRRSGKCGQSLAKDNRRANGGTDIGAL ATVNSPGNCRRGETHGGGVVEEHNGQRVYSAHTRDSGLSRCFASRNSVMVTFGFRKIV QADSVPRETREKLRLARRPYIHLLVTKVFPEYTTSFPRDSPFRCCGEVSQIGLFACET DLPCYRIAKGFSSLPKKNHDVVLGVSGSTGLGYPRTDLSSSSSFRRARRRASLREPQQ QCSAVVQSRECAMDVAERMLRSRGEKGDCGAGNKEGSLGAIPTTARIAHHLINTIDVR DHQEWSGDRVMDTDRLRRPFKIRVTRAFLSTPHCIFNSPNPYSISCICTFIRQRR" assembly_gap 186743..186792 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<187488..>199789) /locus_tag="ALC62_09127" mRNA complement(join(<187488..187604,194605..194667, 197157..197325,197412..197662,197750..198016, 198117..198347,198420..198539,198623..198824, 198906..>199789)) /locus_tag="ALC62_09127" /product="Exostosin-1" CDS complement(join(187488..187604,194605..194667, 197157..197325,197412..197662,197750..198016, 198117..198347,198420..198539,198623..198824, 198906..199789)) /locus_tag="ALC62_09127" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0031227 - intrinsic to endoplasmic reticulum membrane [Evidence IEA]; GO_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA]" /codon_start=1 /product="Exostosin-1" /protein_id="KYN00065.1" /db_xref="InterPro:IPR004263" /db_xref="InterPro:IPR015338" /db_xref="UniProtKB/Swiss-Prot:Q9V730" /translation="MQAKKRYLLLFVTCAFLGYCYFGGYRLKSEKWTGRSQLPYERLP SYLSLNEEFYDKDLKTSSGALIISQRTRYCRMETCFDFTRCKQGFTVYVYPVEDVISP LYQKILNVITESRYYTSDPARACIFVLALDTLDRDPLSTEFVHNLPLKLLHLPYWNNG RNHLIFNLYSGTWPDYSEESLAFDVGYAMLAKASMSIFKHRPDFDVSIPLFGKQHPER GGEPGQALENNFPNNKKYVAAFKGKRYVHGIGSETRNALYHLHNGKDLVFVTTCRHGK TWREFQDEHCQQDNQEYDTYDYEILLMNATFCLVPRGRRLGSFRFLEALRSGCIPVIL SNGWALPFHERIDWNQAVIFSDERLLLQIPDILRSVSNVQILKLRQQTQFLWERYFSS IEKIVFTVFENIRERLPWEGARERIVWNNSPGALAILPQFTDSQQELPFSNSNPGNTF TAIIYSQLGSTAVLYRLLRSLAKSKYLDKIILMWNSDIPVPRKPRWQGIRASIHVVAV DGISQRFYPHPLIKTSAILSLDEDATLNTDEIDFAFTVWRSFPDRIVGYPARSHYWDD SKRSWGYTSKWTNDYSIILTGAAFYHRYYNTLYTELLSSTLHKTVEQSQNCEDILMNF LVSHVTRRPPIKVTQRKLYKDTTVAGIRSPWNDPDHFIQRQTCMNTFVAVFGYMPLLR SNMRLDPVLFKDSVSNLRKKYRQIELTEMHLVIAQPLWLQEIEYGFGHYGQPLGRFAR RHVKTATFPTAFTLKWRYSAARNDREG" gene <207308..>230758 /locus_tag="ALC62_09128" mRNA join(<207308..207640,214839..215052,215131..215239, 215328..216186,218521..218957,219194..219303, 222205..222333,224716..224811,227651..227826, 228131..228326,229539..>230758) /locus_tag="ALC62_09128" /product="Microtubule-associated tumor suppressor 1 like protein" CDS join(207308..207640,214839..215052,215131..215239, 215328..216186,218521..218957,219194..219303, 222205..222333,224716..224811,227651..227826, 228131..228326,229539..230758) /locus_tag="ALC62_09128" /codon_start=1 /product="Microtubule-associated tumor suppressor 1 like protein" /protein_id="KYN00066.1" /db_xref="UniProtKB/Swiss-Prot:Q7SZL5" /translation="MAIPPPPAARRDTAADSDASARRRSITPSSASPTLRASSRLRGN GGVTRGVALSATKSVTPCVVDGSAAQRRSGASLSRAGTRRRACDWGPSRWNQSQTTNG QLGTTGKSRNVGESRIPVPRAARPSFFPKSRVLEASRLLTGSRRSTIFSGCFQFNSED ESPTPREFTGFTTSSPTIKSNSPDSTADQTYTISPAWDIDKNDVQQLVHLSEEKSSLF RLLEESQLSMIEDVGDTCLVESALGSYSDASAAPHYLMLNKQNSFEHDESLGILTPDQ MTDFTVALECSRTPSCENLTGSAGSKLALTRASASTRPLVDVEPAEEGCTERTPSPEE LPLDPKPVEPIRGNTVPVSFVTSVTSITSLEAGYQGDGENSRPASRGADPPSMAVPPV NLPAPCRQDPMTDSDFFTESDADAHEEIVRGDRKAQVIDGTLFCAPGERVCPSFTGEE MDSSGIYSDLDKLQAPGEQAPEENDDHTPDTGDTELSQRSQPSPIAANVIMDYLQSPA KASSDETSNMNDTTNSVEVTTIEKVEKNENIRPKPQSKADTMPLKKYKMPKRNVVSKI KAMIESSSKDDAEKEARRSQRSTRKGGRWDAVMNKIEAGKNEQRTRSVRKEVKSRVLQ NLTLSPSTRPTSKKAGDANNNNNKDKRRMRGWQEMKSPTQETARSSVRSSMSDLSSGP SKDMPKRSPTSANPPRRFVSNGHVNHHQVRVNSFDAKKNCIDVATVELEKSPPSARKP TITRRLAANTTAKQKSSVTSIKDRESKETPHNTTFTITARTSLETRDQAAQTIVPYVD FRVERAERAAQALAVSVGYLAFELDAFATPKLKKDFEKLKADCEEMKNERSALLSEID VLRARCVSMEERLEVEREDHRKALDQLRDELEALRTKQVATLVETLKEERHKYDIRLD EVTREHRATIAKLRAEQINELARKEEMRRSVVHDQGAALMAEIESLRSVLELKSQENA ALRSELDSYRRDIEEKDALQLRLDMAEARCEDLKAQLQRKESFERQISHENEMLHESI HQVSKHNKRLSQRNEELQWKLRNKNDWVSVLANQLNPRLTRSAGAEQMEHSYSLDKNG AHSSSMVKFMVEKGASVSWTLEIDDLSKGGTSDSLSTLPKVARSSEGATTVSRQGSLR LTPNTRPAIDTRARSKSISTTCDSARTAAVEEATAWAPSFSSTPVSRRRPRTDQSSPS SSSSSSSSTSSTAPAVNSAVAAAVAAAAAAAAAAADDCNVGGGQRPQEAGGEAMISEE TSASSSEDESSTGSDIPRLGIQFAWGKPIK" assembly_gap 217391..218345 /estimated_length=955 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <234334..>236879 /locus_tag="ALC62_09129" mRNA join(<234334..234443,234518..234698,234773..235000, 235066..235384,235466..235599,235891..236053, 236125..236213,236299..236496,236721..>236879) /locus_tag="ALC62_09129" /product="Serine/threonine-protein kinase 3" CDS join(<234334..234443,234518..234698,234773..235000, 235066..235384,235466..235599,235891..236053, 236125..236213,236299..236496,236721..236879) /locus_tag="ALC62_09129" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0004713 - protein tyrosine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]" /codon_start=1 /product="Serine/threonine-protein kinase 3" /protein_id="KYN00067.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011524" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR020635" /db_xref="InterPro:IPR024205" /db_xref="UniProtKB/Swiss-Prot:Q13188" /translation="FVHFYCYIFSELKKLSEESLTRQPEEVFDVICKLGEGSYGSVYK ALHKESGQVLAIKQVPVDTDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEY CGAGSVSDIMRLRKKTLQEDEIATILSDTLKGLEYLHLRRKIHRDIKAGNILLNNEGH AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADIWSLGITALEMAEG KPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSGCLVKNPEERATATELLQH EFIGNAKQPSILSQMIAEAHEIREKQNVHRAHIINNVAIKSQNQAEDSDEDDCSGTMK PLPEDSRTLVPSHDLPDTGTLVSAMLDLGTMVINSDTDTEATMKRHNTGSVESSKKYR PLFLDHFDKKEAPEIGGNGQMLGAHNIENANQLEQQSPIESHRFQSHLQLQLQNQISH PIPEQPYNNISKFQNVFTERDFDFLKFLSYEELQQRMANLDAEMEREIDELRKRYQTK RQPILDAIDTKRKRQQNF" gene complement(<239593..>241512) /locus_tag="ALC62_09130" mRNA complement(join(<239593..239847,239922..240104, 240173..240376,240440..240693,240782..240875, 240961..241326,241453..>241512)) /locus_tag="ALC62_09130" /product="Sorting nexin-17" CDS complement(join(239593..239847,239922..240104, 240173..240376,240440..240693,240782..240875, 240961..241326,241453..241512)) /locus_tag="ALC62_09130" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0035091 - phosphatidylinositol binding [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]" /codon_start=1 /product="Sorting nexin-17" /protein_id="KYN00068.1" /db_xref="InterPro:IPR001683" /db_xref="InterPro:IPR019748" /db_xref="UniProtKB/Swiss-Prot:Q5RID7" /translation="MHFSIPDTQEFIDKAGNTYVGYNIHINGLFHCTARYKQLYNLHV QLSKDLDMLLPIFPPKKFFPLTATQQEERRLALEKYIQSIGQNIAINNSEILNGFLLN AQQESANDLSEQETLDIFLLSGSKISLNILPEEHSGKVLKRVYKHIKLAEKYHFHFAL FIITQDELSGSIEMMRKLQNFESPFITYKYMSSTSTTRIVLRKNYWDIAYDVELLKDP VTLNLLYIQAVAEIRSGWIPVTKEAQHQLENLQKSESRKEYLNVVRLLKYYGYIQFAP CYCDYPERSSKVLLAIGENELNLRVLSSEEHEVAFKVSRMRCWRITTIQNGTDYHKDN NECSLELSFEYLIARNELQWITIVSKQAILMSVCLQTMIDELLQKCVVGSKTQTESGK SWTYIMRDGQSRTITGSPLQECVNNNHSKSGPIIKKLTNKWSAVISKKSDDSRGVDKT QSTDFDIVENNVFHMIGDDDL" gene <242327..>248005 /locus_tag="ALC62_09131" mRNA join(<242327..242437,242621..242842,243008..243271, 245440..245656,245967..246293,246494..246708, 246794..247057,247256..247409,247456..247690, 247828..>248005) /locus_tag="ALC62_09131" /product="Pre-mRNA-processing factor 17" CDS join(<242327..242437,242621..242842,243008..243271, 245440..245656,245967..246293,246494..246708, 246794..247057,247256..247409,247456..247690, 247828..248005) /locus_tag="ALC62_09131" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Pre-mRNA-processing factor 17" /protein_id="KYN00069.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019775" /db_xref="UniProtKB/Swiss-Prot:Q9DC48" /translation="YLQNVLVQQGITDDDIAQVQKELEEEEIKLQMHEKESIQYEELI TIVKNQPMSKTEKENIVNKCTEIQNYTHQFDEHLKDFQKESYTLDIKLATFVNNLNKA ILEYNKEVFLIHSDTVKLEKLQEEIKSLPDESKLKDEISHINKIETDAKKKKDKLTKH IEDLKNEIKEMQDMMPDIQAIDFEVRNRRGTIETNYDAVGTELCVKHIDSTATEVTHN PKYEELFGPEVGPENPFKTQQQRAVKNMLSGYVERAHISEFQFENQRRTFASYGYALD PTVDGSADEGRIMIGATEAAEESGGKTVFENTTLRPSDKRKRHRNNDASDIEGFLGPW GGYIDEKRVIKPSDEEAAELEEILAKRNKRGKQTEEKPLEEKTVLHIKDSVDYQGRSF LHAPQDVGVNLRSESPPDRCFLPKAQIHTWEGHTKGISQIRWFPRTAHLLLSCSMDCR VKLWEVYKDRRCVRTYYGHRQAVRDISFDNDGKRFLSAAYDRYVKLWDTETGACISRF TSRKIPYCAKFNPDPDKQHLFVAGTSDKKIICWDIRSGEITQEYDRHLGAVNTITFVD ENRRFVTTSDDKSLRVWEWYKFTNIFLFYRDIPVDMKYIADPSMHSMPAVTPSRNQKW LACQSMDNKIVIFSALNRFKMNRKKTFTGHMVAGYACGLDFSPDMSYLVSGDADGKCY IWDWKTTKLYKKWKAHDGVCIDVLWHPHEPSRLATAGWDGKIKYWD" gene complement(<246896..>247948) /locus_tag="ALC62_09132" mRNA complement(join(<246896..247028,247266..247399, 247892..>247948)) /locus_tag="ALC62_09132" /product="hypothetical protein" CDS complement(join(246896..247028,247266..247399, 247892..247948)) /locus_tag="ALC62_09132" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00070.1" /translation="MWMPQYINAHPIVRLPLFVEFVPFPNSKTFIITGCDESSIFVNK CDSVYSTQVSIIFLCYFARSYKQMLFIWIWIKLSTIWNFPTCKATNTSSRFCVPKFHI AIVSR" gene <250231..>259080 /locus_tag="ALC62_09133" mRNA join(<250231..250379,250752..250855,250973..251122, 251506..251608,251855..252008,252109..252189, 252590..252689,252765..252892,254379..254528, 257321..257423,258283..258513,258947..>259080) /locus_tag="ALC62_09133" /product="hypothetical protein" CDS join(250231..250379,250752..250855,250973..251122, 251506..251608,251855..252008,252109..252189, 252590..252689,252765..252892,254379..254528, 257321..257423,258283..258513,258947..259080) /locus_tag="ALC62_09133" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00071.1" /db_xref="UniProtKB/Swiss-Prot:Q9P2C4" /translation="MDGPGLGYSYHLPSAGWNLKVRNALSQFSDIFSEFNKYIAPAYH HDRCERSVQMRLYSMHKREFVMVFVAFFACFGLAVFIGLAGPPITSTSEQKAHLNGTE MATGPFIMKTPLLSTYSQQLWVIAKLSTSNNDDERYDKGFQVSVSIDGITADRKLVSV LPPEAGHNRTRHLKCERQSCEELVVVHLGFLDYSYYIITVRFHGLESFHQRYTIRELT FYFKNYNPAFTQIEIWFRLIFLLATFGVMCWFGHSLRKYPLHDWSIEQKWISILLPLL ILYNNPLFPMTFLMNSWVPGMLDAILQTTFLCAILMFWLCVYHGLRQNERRLITFYLP KLLVVGMLWGAALTLATWLRCTELEDPTYNYVLDTSNYYGFKVFFFTVGGFYIAYLLL LILRAYSELRSMPYFDLRLRFLTLLAAVVAGVCSLVTARQFGAGVLEDSFASRLSTYY RTSAQFMALYGLLNFYLYTMAYVYAPALQQVYGQHSSITKDSPAFSMFNDSEEEVIYG SDEDSRRPLTRSSRNAEDSD" gene complement(<254768..>255582) /locus_tag="ALC62_09134" mRNA complement(join(<254768..255082,255289..>255582)) /locus_tag="ALC62_09134" /product="Peritrophin-1" CDS complement(join(254768..255082,255289..255582)) /locus_tag="ALC62_09134" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008061 - chitin binding [Evidence IEA]; GO_process: GO:0006030 - chitin metabolic process [Evidence IEA]" /codon_start=1 /product="Peritrophin-1" /protein_id="KYN00072.1" /db_xref="InterPro:IPR002557" /db_xref="UniProtKB/Swiss-Prot:O76217" /translation="MELQKDIEKYSDPKPLQVSCTMQLLCPPEDSTNHKNRDRIRYRM HENDPDIRMMCEVKLKINIMRSMSTTKMEEKNPCSGLSYNGHPVLLPHSTNCSLFYKC DWGKPMLFTCPEGMHFNPDLQVCTWPWQGGCDSSRICPRPFPQCPIHYSDPLLLPHPF LCDRFYQCNWGTLRLQTCPTGLNFDPHLKVCNWPYNSNCQTC" gene <271019..>291227 /locus_tag="ALC62_09135" mRNA join(<271019..271375,290727..>291227) /locus_tag="ALC62_09135" /product="hypothetical protein" CDS join(<271019..271375,290727..291227) /locus_tag="ALC62_09135" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00073.1" /translation="SSFYRSGVLSTEDEVATGMSVYIHERSIVLFASLQRINAYYICM CHSVSVCVYMWHVNICDTWSKRAFSAIFGRITRCKEEARVKHFVDFTASNDKIQRLLS SRVLSVTPLNGMLTRVIGYPVLIARQEYRHETWLSAVCETSIAARSRLRVAGSGGTAR RGGNFLSVQVATRAPISFLSRRYRSLIARAMDGEPLLAANAPWRKPVPSRTDRFDPST RSMHKHPFFRHSFLPLSAIVPFYRTSDDSRTPRAGSLTKNGSKKVAVDSELCSKRLLA NRKSDGLDC" gene complement(<274211..>282110) /locus_tag="ALC62_09136" mRNA complement(join(<274211..274538,274619..274787, 275081..275471,275948..276188,276611..276905, 277262..277333,278086..278205,279136..279300, 280462..280702,281700..>282110)) /locus_tag="ALC62_09136" /product="Maternal protein pumilio" CDS complement(join(274211..274538,274619..274787, 275081..275471,275948..276188,276611..276905, 277262..277333,278086..278205,279136..279300, 280462..280702,281700..282110)) /locus_tag="ALC62_09136" /note="GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Maternal protein pumilio" /protein_id="KYN00074.1" /db_xref="InterPro:IPR001313" /db_xref="InterPro:IPR011989" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:P25822" /translation="MSYSILFSQTLFRSQQGATPQQLQLLQQQQQQQQQQYLAASQAQ QQQQQQQQQNFPTAPYTVISGQEPYVGALIAGAPPPVVPQYYGVGPWVYPAGLLPQAP PQAAAPPPPRRPLTPSSAAAAAAAAQDTANNLAQTVQGQYQVIPAYYDQNGSIVMGGV RGLSSAATPMRLVSPAPVLVNRAPSQPPPGPPAPPPPNLYSQPTPTSHSNATPGECLG LAACSAAAVVAQAQAVAVQQAQQQGSGLAAGLAALGYGGSPLGALGSPAQLQNTGLGL GASSTGRRDSFDRNTSAFSPSLEYSRAKWPQSYGALDTGTWDRVYLATNAGTPCKEYT DTGTVTASPSPLGLSLTPPPTLGGSLGGLVGGASRVSAAPGAEAKFRASAVPTLTANG VFGSSSSLFPNLVGKPGRGGAANINDKNSGGRSRLLEDFRNNRFPSLQLRDLANHIVE FSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTQEQ KSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGN HVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGILQEL HAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKCVT HATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL GSLRKYTYGKHIIVKLEKFFMKTASAMGVGATSAGTSTNSGGGDLGPIGPPASAASGP VSTSNQQSTQVL" assembly_gap 286082..286107 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<290797..>296149) /locus_tag="ALC62_09137" mRNA complement(join(<290797..291114,294362..294451, 295378..295467,296069..>296149)) /locus_tag="ALC62_09137" /product="hypothetical protein" CDS complement(join(290797..291114,294362..294451, 295378..295467,296069..296149)) /locus_tag="ALC62_09137" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00075.1" /translation="MYALYIRGVSKGNINRGGEVIKDEVENSSFRLGTANNGSLGIPH GCNCKNNGPYIVRHYLAIYIYSIYRHAPAVADDKSDIATRDNFFSSHPRSGRTVQSPT AGGTNGGRRGVCASTVCSGQIDRFVKEPVSAMEHWRPTAVLHPSPARLTTGIYEKETR SVLSSQPVHLESCRRAAPSRRCRRHVIWNAPR" gene <302220..>305240 /locus_tag="ALC62_09138" mRNA join(<302220..302324,303927..304115,304136..304269, 305036..>305240) /locus_tag="ALC62_09138" /product="hypothetical protein" CDS join(302220..302324,303927..304115,304136..304269, 305036..305240) /locus_tag="ALC62_09138" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00076.1" /translation="MSYRNQLMNPGQEMLDDNIEYTTERRFPVAYEIRPRPVETSFSI SVALQANHDGLCQQLVQRYHGIMEHEDKGTREGERGSMGMEKPCTVLSIPSKITLSKT ACRCEKKRSSTKDDDRITLPSTLQRAIEATKYSELPQILETKTLERDVATAIPMGGRL EIRKNIPRKLTRIRKPARRRVNQSGKLTRARNSSARTINRNNFCVNHSNS" gene complement(<304129..>356311) /locus_tag="ALC62_09139" mRNA complement(join(<304129..304308,304596..304682, 328643..328985,330743..330873,330962..331061, 331539..331650,336395..336536,351186..351410, 354751..354864,354980..355114,356114..>356311)) /locus_tag="ALC62_09139" /product="Pumilio like protein 2" CDS complement(join(304129..304308,304596..304682, 328643..328985,330743..330873,330962..331061, 331539..331650,336395..336536,351186..351410, 354751..354864,354980..355114,356114..356311)) /locus_tag="ALC62_09139" /codon_start=1 /product="Pumilio like protein 2" /protein_id="KYN00077.1" /db_xref="UniProtKB/Swiss-Prot:Q80U58" /translation="MAGGDNMRIQPGQTHQIGVSRTQDDAMVGYVFQRPTEPEFNTQS STFQAKQAPRAWALADDVIVDNNQEKWKYSMTKLGVPQQSQSQQLGLTMNNVHLSNVP YEIHPMQLKSGAPAEHLVYLNNQMTAQQQVALFHHQQQQQQQFRNGQVTHRADDAAAA TTAAAVVAAATTATAATLETVESFGIGYGQGAGESTGNWMKPPGNLFLYPTLDMKDLT GSVEDMIAPSTKKLWGVDEGGSKDEGGVKGGGTLLHLGDHPTMWRDSTWSTTSDHAVS QPISMGTGRRVGVGTGYHHQASEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKDLE PRMVSLRLNTEADKKEKEKGSASPFDSSKDDAGPQGNGLASQNGLDDDKGFNRTPGSR QPSPGEEEFQKNAGPALVNNNVVLLKPGIDVVGNEEHFMAAFAPAPPHHLQHHQAPPT HHLQHPHSHAAAQLFGAQAPPPPQGPPPSQQQQQQQGPPQPQETAPFDVGVIFRSGSM IQSRCQNRKRMVGVDGVSSLVSWLGYAIVFKANYVSRICGSSEYLVASMARCNVDGNV ILSSSFVDDLFFSHRHAVLLNG" assembly_gap 318961..319017 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 341984..342030 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <344939..>351431 /locus_tag="ALC62_09140" mRNA join(<344939..345333,348609..348639,348676..348725, 351230..>351431) /locus_tag="ALC62_09140" /product="hypothetical protein" CDS join(<344939..345333,348609..348639,348676..348725, 351230..351431) /locus_tag="ALC62_09140" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00078.1" /translation="GSIFFLSRQMDSRRFVPPLLTPAVLAHPGPPSGLRRTPTFSSST VWRGVDVVKLPRGHRPLSPVPSATGHGHCPLVYPRGIRRTTREDESRALWVNTHAQDV VHIVRTLSRGIRVRPSPCKVYYVATETWIKISKIGLCLGVSPVVVCHSYRHVRPAILV EKQIPRRFHPVACALARSLAVTDTETLHCLQGRGCGGGGGGDDGGGGGGSGGVVGAVR HLREIHR" gene <351450..>365556 /locus_tag="ALC62_09141" mRNA join(<351450..351635,363751..363941,364022..364240, 364339..364420,364495..>365556) /locus_tag="ALC62_09141" /product="Alpha-(1,6)-fucosyltransferase" CDS join(351450..351635,363751..363941,364022..364240, 364339..364420,364495..365556) /locus_tag="ALC62_09141" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Alpha-(1,6)-fucosyltransferase" /protein_id="KYN00079.1" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR011511" /db_xref="UniProtKB/Swiss-Prot:Q9VYV5" /translation="MTTRKTENSRVTRGNTFLSSSTSPRYSTSSLSLHAHYCCARRIG GRQSMVIRQRQQRCRQPPANIISREGSKSIQGDHLGSVQDKLEKASVYYDLIDHQDGS KHGVPSLEYEELRRRLRNDIQEMWYYINAELNKFKKHIDEFTYDQREKEIQDVIKNAW EHKKSLIINVDKLKKSDGYDEWREKEAKDLSDLVQRRFRHLQNPTDCNKAKKLICSLN KGCGFGCQIHHITYCFLVAYGTERTLIMKSKGWRYHKDGWESVFKPLSDTCLSTTGAS HSNWPGDPSKQVISLPIVDNVYPKPRFQPPSVPADLAPRLEKIHGHPLVWWVGQVLKY LMRPQDHVKRMLENAKERLNFKKPIVGIHVRRTDKVGTEAAYHDIDEYMVKVEQYFDE LETKPDARRVFLASDDPKVITTARKRYPNYEIIGDPEIAETASVAKRYSDTSLQGIII DIHLLSECDYLVCTFSSQVCRVAYELMQTFYTDAYDRFASLDDIYYYGGQNPHPHVAI LDHKPRKNGELELKVGDLIDVFGNHWDGFSKGYNTRTSMTGLFPSFKVKNPVDAVDFP KYSNIPLLENKED" gene complement(<369836..>375122) /locus_tag="ALC62_09142" mRNA complement(join(<369836..370024,370129..370385, 370485..371068,371408..371847,371930..372325, 372499..372596,372746..372847,373669..373965, 374048..374579,374985..>375122)) /locus_tag="ALC62_09142" /product="Retinoblastoma-like protein 1" CDS complement(join(369836..370024,370129..370385, 370485..371068,371408..371847,371930..372325, 372499..372596,372746..372847,373669..373965, 374048..374579,374985..375122)) /locus_tag="ALC62_09142" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_process: GO:0051726 - regulation of cell cycle [Evidence IEA]" /codon_start=1 /product="Retinoblastoma-like protein 1" /protein_id="KYN00080.1" /db_xref="InterPro:IPR002719" /db_xref="InterPro:IPR002720" /db_xref="InterPro:IPR013763" /db_xref="InterPro:IPR024599" /db_xref="UniProtKB/Swiss-Prot:P28749" /translation="MGQSDDIEDSMYSRHQDLCQKLNMDATAASEAWKSYETIRQNYT LEGDQLHWIGCAVYVACRKFSIPTVGRPGTNVEGNCVSLTRLLQLCNLPLIQFFTKSK SWADMANMPQDFRARIEKLEANFSVSMVIFKKYQPIFADIFKDPREDISKPHRSRRHK AVPCTPTRVFEFCWTLFICIKGAIHDISDDLVNSYHLLLVCCDLIYSNALLSNRKELF NPNFPGLPTNFNDENYNQPQTANCIVNLLCERHDAIAVEAKVIKEYCMKNYINKLFNE KILRGDQSNFSGMLEALNFDGNNKAINKSYEQRMLSVGDFDERIFLAEWRRIILNNIS ISNIFMQNDAKHGEFIKYEILQGHNANENIGSPTQMMNIEDFHERLQMQREQHAGQIQ YLAPPTPLTGRKYLRSKDMSNTTPVTTATQSVIKLQALIAGQSAPSESLLQILNNCSQ DVKSSLEAKVKQIGEQFCANYNSNANIANTNDGSASDFGKNRLRMGRTLFYKLLEMIL NDEKRKKPNDDITNLLLNAVFIQCLFACCLEIVIYSYKSNDKVFPWILKALNLDAYYF YKVIEIIVRAEDQLSRDIVKHLNHIEEKILESLAWQSDSPLWQTIESLVDGVPSCEEV SLPGTLETADPNAPGQPVLRRIALDRERTQHDVQQSPISSASERFQSPVAASGVAKKR LFSETRVTGQSVLRVGQSVLSTNRMLVDNGQRILLVPEQIVVSRPSSTQAINNSTQST NRDAAKPKRTGSVALFFRKFYNLACVRMQDLCNSLEISDNDKKKIWTIFEYSVKERTK LMKDRHLDQILMCAIYVICKLVRIERNSFTEIMRCYRLQPQAESHIYRSVLIERASND RDSRTNNIRGDLIKFYNTLYVPQVKEFANKFGSARGSVMNLSLSPLPKGKAPANSPIR RVTGSIMTRTLDPKAISASPAPQLSYCFSRSPAKDLEAINKMMICVDAKKKSVGKRLL SDDTDVEMTESTSPPKKTTTFVARKLENIIGERRTQNQ" gene <382972..>386307 /locus_tag="ALC62_09143" mRNA join(<382972..383271,383819..384154,384434..384690, 384778..384907,385078..385264,386048..>386307) /locus_tag="ALC62_09143" /product="hypothetical protein" CDS join(382972..383271,383819..384154,384434..384690, 384778..384907,385078..385264,386048..386307) /locus_tag="ALC62_09143" /note="GO_function: GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00081.1" /db_xref="InterPro:IPR000215" /db_xref="InterPro:IPR023795" /db_xref="InterPro:IPR023796" /db_xref="UniProtKB/Swiss-Prot:Q8PTN8" /translation="MTRMRLLLGFLALANGQVIYPDQYNRMTSFGRASALSANYQADS SSQPVQMNQQFNPGSAVQSKPTGEFYSTTARVPLYSSTSTVLTASPQSTSEAWRNHVN NIVSRGITKFALDLDRAIDKSSGTLTTNNHENVIFSPLSVSVALSLVLLGSAGKTFDE VTRILGLETGVDISQHSEIVHQMFGQLLAIMNYRVENSNMPRVSSASGIFVQQGYPIR SEFRAISENAYNSEVINVDFHTKAKEARDIINAWVKKRTMDKIDSILNDTPHPLTTVI LLSALYFKGEWNQHFLEGMTRRKPFFIEPNNSIEVDMMYNGGHFPFYEDKSLGVKILA LPYKGLEMSMYVLLPKDEGAAALKNFQNQLTVDTIEYLINNTKNETCVIGFPRMKLSS KLNLNQALESLDILRNSANLVNPGLYADEVLHKVEMDVTEKGTEAAATTAVALRRDGN QKKLVANRPFIFFIRHDPTKLILFWGTVNKPTPHYAVVR" gene <389347..>389874 /locus_tag="ALC62_09144" mRNA <389347..>389874 /locus_tag="ALC62_09144" /product="U1 small nuclear ribonucleoprotein C" CDS 389347..389874 /locus_tag="ALC62_09144" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="U1 small nuclear ribonucleoprotein C" /protein_id="KYN00082.1" /db_xref="InterPro:IPR000690" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR013085" /db_xref="UniProtKB/Swiss-Prot:P09234" /translation="MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEE QAQHLIDATTAAFKAGKIASNPFAANKGAAIPPPPNLGSNLGSRSGVPPQGPPGMMPP PGMHPAGPMGPGGPMMMGPHGPMPPPMMGMRPPMMGPMGPMGPMMGPIGPMGHMRPPM NGPPPPMVGPPPMKK" gene complement(<391218..>395030) /locus_tag="ALC62_09145" mRNA complement(join(<391218..393033,393565..394774, 394904..>395030)) /locus_tag="ALC62_09145" /product="hypothetical protein" CDS complement(join(391218..393033,393565..394774, 394904..395030)) /locus_tag="ALC62_09145" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00083.1" /translation="MDNSNTIKFNSMTTEANVKLKQSQYESEKHSLEQPSTSNTTKAD SQKMSSTHQSEFVQVETLSSREMNPTCGWYDDKSRKDPSIIQGKQRKKNSPKKYRSSK HIKTVHKKSSEKDNDTFSKYNVVSKCIKQKAHLFLAEQMDKDKDSSDSEESILEVPIP PKPKPLLIHLQDSDDENNSNSDIDNNDLILKNWNSASLKTYSRKSLFRNDKRETVQDN PQDISSKSKGTATSNNKDTVNFGKSIQTSTLTQDLTEDITLNCTTIQSSTKSISEIKQ LSKNTEVKQQSESTKSTSHNSKTTSPFSKNTWKGNKNANLQQETHVTSEKKLSTTKQI INKLSTNNVCNRYDLRGVEQNKSSAIGSCNPINNRKRRCNNEVDNQSEQKRQCIIEQN NQDVICSSTGAKNISNEFFEPMSEEMKNYYNLSRGQENFDIRELQQSMSKDPQIYPEP NTSDFSLSETTQNETSIPQSTIDVQQTITEDVESSVDVNTLSNIDFYILPISQEVEHV SQTENDLKSSFILPTVETNFKHTKVNYVAFSKIIYSYDFYRNKNDNDARMILTTLDTL FSQTDKNFYMVKNLISHRTAPNFLEFLTLKAIKFEVKIGFIQNQKTLSLQLIAMKDYI EYLYDLLKHWLSLLEDEKKYGIDVNLPVNSVKMFNVLKGKYLQLNKMRFNHYADLIGG NDDPRLLYTFINLEKDKLKGYEQCKVSRRKYNSTRKKVFRLQTKLLIITNTVPEPNVY VRTFKDLMERYEAGHCQMNDKLDTATYLRLNLLYNQLFVPHTSQNINKMLHCIESEAK KLSNLQQQEFEICHVPLEKQQEPKIHDTSANEENLVCNSTVHTSSAIPHISLNIDSKN SYVINNQKNNEILDDAQNVNTSLEPSKMIDYEELTITIKNPIAQNSDCEIIPLNDAPV SPAKSKEPELNEGQLSTSEVVNFNVSENEQIIKTVCKSSNLSKKAKRKKMRAERLTNI HKLNDTLKNENLYDVALKLINRTHAFKSLHMKNAADEMRKRVKNRTIKPKHLRLLDKL IFVEESHQKIIKSVCNSLKK" gene <400430..>407791 /locus_tag="ALC62_09146" mRNA join(<400430..400737,400855..401036,407460..>407791) /locus_tag="ALC62_09146" /product="CCR4-NOT transcription complex subunit 6-like protein" CDS join(400430..400737,400855..401036,407460..407791) /locus_tag="ALC62_09146" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="CCR4-NOT transcription complex subunit 6-like protein" /protein_id="KYN00084.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="UniProtKB/Swiss-Prot:Q8VEG6" /translation="MSRNHKDKYENSNPRRMYTLMCPEDYQSGKKSHWSELEITGSIR NLSPNLWQMTHLTALYLNDNSLQRLPSEIGRLVNLRILDLSSNKLRSLPAELGELIYL RELLLNQNFLRVLPYELGKLFQLQVLGLQGNPLSKDVMTLYGNGEPAGTNKLLTYMLD NLQGHVSSQSSDPLLVFPCSYRAGPTGYVLVLSRVPSTRLVHFLPRAPDPRATHWAPP PPPPSPPPRVLSSLGLSLTRPSKPAVKSFREQWITTGSFPLASYRRALKAADIRG" gene <470176..>472263 /locus_tag="ALC62_09147" mRNA <470176..>472263 /locus_tag="ALC62_09147" /product="hypothetical protein" CDS 470176..472263 /locus_tag="ALC62_09147" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00085.1" /translation="MSPASQGALEVERYIGSCLISSNLRAGLHGKPVPVCRKQEQSVT IRGGKARGCYNGGQSYPGLADQQQCQVQYGGPGGWTGAPLISMTSSPRRCNQRSSPSL GQQQQQTCTDQQQVPPGGHLHKSPLSRLAIHTQGAPLILAGRFYNRGKVHSNNNNNSG NPNGITNTPPCGNIVSNYVHNTVNPSMTSNVNGATRCPASRIAPQKPMEATAKKSPTT VSPNSKTTATNADCSSAATKENTGSSSIANIDSLSIASDESSGSNNSENSLPRIIKPR KRRKKDRKPPNNVVASGVDAAKPEEPQVQRQQLAGCGAVVGEQSNVIGVKSYAPTCYE PRIYEAATPHLRNYRRPPVSHRENIYGGCRAPSMQTEMADIRQQRYAHHRHHVQVKVL DDNRNVIAAPMRATAPPKGYRHHHANDSGNLPRRYVHEYAGESCETAARGDGLGPCQC RYCDPAGLIWDVDRNGYSPFLTTTLSPPQPSSSGVEYCRNSHFGQIPLFLTSPCTNLQ ERALDRLFDEHSRLHDDNRDMGPVAGPGGVVLRRSWSDPTSYFSYGEEITAPTKDVGV IGDRGGQSESGKHKRALWRGDSIGSAPASSPANANAVGPNAGGGFIASPKGLEVSTEI ITSPNGHRDLEIKFYSSPSTAERLAEEDKSLSSFPGEVDDDDNGDDDFSDIWSYHESK LQQDFRTLLQAEE" gene <514152..>514508 /locus_tag="ALC62_09148" mRNA <514152..>514508 /locus_tag="ALC62_09148" /product="hypothetical protein" CDS 514152..514508 /locus_tag="ALC62_09148" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00086.1" /translation="MTAGVPAGADTSGERGIRGALSLTACCEINERCTRQDEAKWRVS EIVGRNSVRKSALFPSATPIDGLCALMRVTAPSDRWIDRSIDRLIVYRGLLYEISGSY VRTESPLRRWRFPDDR" gene complement(<522483..>531535) /locus_tag="ALC62_09149" mRNA complement(join(<522483..522731,526862..527041, 529638..529724,529813..529875,531338..>531535)) /locus_tag="ALC62_09149" /product="hypothetical protein" CDS complement(join(522483..522731,526862..527041, 529638..529724,529813..529875,531338..531535)) /locus_tag="ALC62_09149" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00087.1" /translation="MQAVSGATTHSSLRPGLRSSLECKWSRRGEMRGEARNIVIEKRK DTESMLNRPFVRNKSATHGKKKNKYPYRYPIFLASNSCVDRSKDIGMYDINVVYNVDE FRCNARDNHYVSNVSGRAAANPDFFRPPFLLKSCNVSARSTRRLGSATFRKFAPHAGL VQLAPGVLERTGIREFNVFSNELNCKTTSPPGRFEIEYLGDVEFLLDVYRKRDDNPAI SDTGNKTPPSSKRLFSWLESRRLRAHRVVVASVHPSEAKY" gene <524874..>525918 /locus_tag="ALC62_09150" mRNA join(<524874..524983,525345..525396,525446..525544, 525874..>525918) /locus_tag="ALC62_09150" /product="hypothetical protein" CDS join(<524874..524983,525345..525396,525446..525544, 525874..525918) /locus_tag="ALC62_09150" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00088.1" /translation="VGREEEGIGPCIGRTLIEPGALAPAYQDNAAKLRDALGYCEVSN MSLRIERIEWETIDTQKLKGATAMQYYFAVAAFWSRNVEQVLWETAKSPHRQHTFDA" assembly_gap 540387..540580 /estimated_length=194 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<566744..>570330) /locus_tag="ALC62_09151" mRNA complement(join(<566744..566944,570301..>570330)) /locus_tag="ALC62_09151" /product="hypothetical protein" CDS complement(join(566744..566944,570301..570330)) /locus_tag="ALC62_09151" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00089.1" /translation="MYRQICQNSHNRKKVKDVELEEILNENSCQTQLELANTLGVTQQ DVSYRLKQLGRSKLIKKGRELICTPNNKCAIL" assembly_gap 601398..601495 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<612833..>613664) /locus_tag="ALC62_09152" mRNA complement(join(<612833..613139,613639..>613664)) /locus_tag="ALC62_09152" /product="hypothetical protein" CDS complement(join(612833..613139,613639..613664)) /locus_tag="ALC62_09152" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00090.1" /translation="MSQKRNSRSFLQSKFPLTFLIPSKCICRKSHERLKDEHVVYLSR EITRDMIALPWIHKNSLTCLEDTTIDESRESLKSYYKSVSFIRASLTRLGCAHKTRPR LRKRRAQT" assembly_gap 622234..622273 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<632391..>639756) /locus_tag="ALC62_09153" mRNA complement(join(<632391..632579,633425..633526, 639697..>639756)) /locus_tag="ALC62_09153" /product="hypothetical protein" CDS complement(join(632391..632579,633425..633526, 639697..639756)) /locus_tag="ALC62_09153" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00091.1" /translation="MHTLASGKSSYDKRNNTRITLLNTNIRHTHNEKVSSFGSSGCRR PRTSNFRTRTAGWVERLNSGMTSWLGVISHALVANGIVMRVLAERRYELATGQQRGTM SVATTVAGCGFLSL" assembly_gap 644809..644861 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<655410..>705778) /locus_tag="ALC62_09154" mRNA complement(join(<655410..655581,659115..659144, 661203..661219,661650..661823,663285..663404, 663869..663910,680669..680759,694092..694297, 703336..703503,705629..>705778)) /locus_tag="ALC62_09154" /product="hypothetical protein" CDS complement(join(655410..655581,659115..659144, 661203..661219,661650..661823,663285..663404, 663869..663910,680669..680759,694092..694297, 703336..703503,705629..705778)) /locus_tag="ALC62_09154" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00092.1" /translation="MESNLRYPIMRLFLPHFRACESQELRYPISRKGETIPCEKRSNA AAVPLLVLSSRILRPSRNGMLCIMVTPQTALRERKANSQIPRGLDAVQDMRQVYVLVP VTAPGRRISAVKHDTVPVALKLQGIGLEREAKGKGRGRRPSRISSKRARPHAMLTMNE IKNLGECNARPCDARSSQVRSIEGGVKNGEGSRTEREEDDYSGSSCRIQTILHLRKLE SSFKGYIFQNVTFIVPLKITFVSDDYGRESRAWNASSIAIGDIIILIEVPKLHFNNNR IINLNISRSIWINRLSRVRTRVFRNNVSSQMLRCSEMFELKEVEHMWHETGVPQYNGR NLCIIAHDVIVESTRVSRIFDEHVFPEYVVPLRKRHITVQVSRSNCLVPATSNSE" gene complement(<763969..>765604) /locus_tag="ALC62_09155" mRNA complement(join(<763969..764151,764729..764884, 765404..>765604)) /locus_tag="ALC62_09155" /product="hypothetical protein" CDS complement(join(763969..764151,764729..764884, 765404..765604)) /locus_tag="ALC62_09155" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00093.1" /translation="MSRDKSVRTICPCCGHDYGIRTRAESKLVACSPKCASSRRKLNN FANSQLCHLQAECDSRVQSRYRQKTLSMDDEAARTLRVLKERPRRREEVEEGGSRHCR SQSKLSHGYAFCANQVTNRDSTYDECSSNDCVNKRWNRWRNLDKSKTPKIWGQSKSED STGIAGDFYARQVCSRECG" gene complement(<771331..>772908) /locus_tag="ALC62_09156" mRNA complement(join(<771331..771456,772567..772626, 772894..>772908)) /locus_tag="ALC62_09156" /product="hypothetical protein" CDS complement(join(771331..771456,772567..772626, 772894..772908)) /locus_tag="ALC62_09156" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00094.1" /translation="MIEEKSYIATWCPVCDKQVSIEERDKNGALRISSNRVSSPVTPV DSSGKKNEPKKVYDTRGRYRCD" gene <786585..>786938 /locus_tag="ALC62_09157" mRNA <786585..>786938 /locus_tag="ALC62_09157" /product="hypothetical protein" CDS 786585..786938 /locus_tag="ALC62_09157" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00095.1" /translation="MPPGNGNGSVPPGQWTFLFSVLLLLLPRLPLPASRPPSFVTPPG STDALASDTNRYLFVGPSACLFTSCTSSSSSVQRFSNRAKDATLALVPSSSKSSFLPS EISLVNELSDILHVS" gene complement(<839638..>926071) /locus_tag="ALC62_09158" mRNA complement(join(<839638..839697,839764..839781, 839823..839909,879570..879586,889846..889927, 890072..890166,925556..925736,926021..>926071)) /locus_tag="ALC62_09158" /product="28S ribosomal protein S24, mitochondrial" CDS complement(join(839638..839697,839764..839781, 839823..839909,879570..879586,889846..889927, 890072..890166,925556..925736,926021..926071)) /locus_tag="ALC62_09158" /codon_start=1 /product="28S ribosomal protein S24, mitochondrial" /protein_id="KYN00096.1" /db_xref="UniProtKB/Swiss-Prot:Q9VCC3" /translation="MSHGNVGNADCDVNFNYILPVVQQTLMQRYFHTSTIVNKVQSGR YKITINRDKPLTYEMANPPHYIAHRKSWNSWNTSRADNGFLLDGGRPANQPANHPSYP ASRLYLSDAAPRAPGLRNSSALTDGQGASIVQTRGKIMRSWKKHRDTARGHSQLFQRC NARQRWQCHAAFGGRFDVSPIGGPLAAGIVRNRKNG" gene 930240..1041641 /locus_tag="ALC62_09159" /note="Tetraspanin-5; hypothetical protein;nonfunctional due to frameshift" assembly_gap 940505..943360 /estimated_length=2856 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 950157..950626 /estimated_length=470 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 979581..980231 /estimated_length=651 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1072632..>1075247 /locus_tag="ALC62_09160" mRNA join(<1072632..1072854,1074892..>1075247) /locus_tag="ALC62_09160" /product="hypothetical protein" CDS join(<1072632..1072854,1074892..1075247) /locus_tag="ALC62_09160" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00097.1" /translation="HTVSSYSIGAERRMESNKATHSVNDNRHSVDSKSNDDDDDDDND DDDVDGGTVYVIAFGGKEENTEKERDTEESGPHFVVVNGDMQNPLDPWSIVWYIGSFG GLVAFFLIVSCSEWCCRRGGRPLTVPYAQRAETLNTTGVTETPPPPYHLFAPPSYDSV NYNEIVDKTSGEKLDIYVISVPIHRPMAQAPA" gene <1081526..>1083130 /locus_tag="ALC62_09161" mRNA join(<1081526..1081597,1082074..1082251,1082373..1082505, 1082583..1082747,1083046..>1083130) /locus_tag="ALC62_09161" /product="Programmed cell death protein 10" CDS join(1081526..1081597,1082074..1082251,1082373..1082505, 1082583..1082747,1083046..1083130) /locus_tag="ALC62_09161" /codon_start=1 /product="Programmed cell death protein 10" /protein_id="KYN00098.1" /db_xref="InterPro:IPR009652" /db_xref="UniProtKB/Swiss-Prot:Q5ZIV5" /translation="MTMGDETPVTSLVLPVILRPILTKLERQNVMAAQTLRAALSKAE SSHPGITYDLIMGIIRRAELNLDMNESVLRLQGTASDYDVVEYRSARSEDAFQELNRK STSLKRILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVTAFIPGSTGKQALDQR KREFVKYSKRFSNTLKEYFKEGQANAVFVSALYLIHQTNMIMLTVKDKCE" gene complement(<1083984..>1085117) /locus_tag="ALC62_09162" mRNA complement(join(<1083984..1084223,1084947..>1085117)) /locus_tag="ALC62_09162" /product="Actin-related protein 2/3 complex subunit 5" CDS complement(join(1083984..1084223,1084947..1085117)) /locus_tag="ALC62_09162" /note="GO_component: GO:0005856 - cytoskeleton [Evidence IEA]; GO_process: GO:0030833 - regulation of actin filament polymerization [Evidence IEA]" /codon_start=1 /product="Actin-related protein 2/3 complex subunit 5" /protein_id="KYN00099.1" /db_xref="InterPro:IPR006789" /db_xref="UniProtKB/Swiss-Prot:Q4KLF8" /translation="MSRNDGKKDTSASAFRKIDVDQYSDNNFKEEDADGGVGAPTGPD ENEILTLLSQYPFDSARNLTQKVLLSIKSNQMDDCLAQLDRDLIDVLMKYIYRGFEIP TEGSSSHLLLWHEKVFNVSGVGCIVRVFSDSKRA" gene <1088273..>1090941 /locus_tag="ALC62_09163" mRNA join(<1088273..1088369,1088560..1088610,1089885..1089967, 1090435..1090605,1090765..>1090941) /locus_tag="ALC62_09163" /product="hypothetical protein" CDS join(<1088273..1088369,1088560..1088610,1089885..1089967, 1090435..1090605,1090765..1090941) /locus_tag="ALC62_09163" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00100.1" /translation="CIATAEYNPVCGTDNVTYWNIGRFNCAKNCNPQLEIRVIRACEP YSQLSTNYFKYFICDAKCYSYIYTPISTNISIMNLDNAPGMEMAQVDGFIFDGPVASE SNGKQGITSTSTTTVASVLLNNVYNACIINCPVTNEYNPVCGTDNVHYVNPGNLGCAQ RCGKGEILYKNFMTFYLTYLLCYMKDICVVTI" gene <1094802..>1095641 /locus_tag="ALC62_09164" mRNA join(<1094802..1094903,1095291..1095437,1095534..>1095641) /locus_tag="ALC62_09164" /product="hypothetical protein" CDS join(1094802..1094903,1095291..1095437,1095534..1095641) /locus_tag="ALC62_09164" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00101.1" /translation="MYQLNDSIIEYLYYAILIILTVAASPFLIIAIQQNSDDTMEIVQ VDNNSPMAYGQFNGQESEVTSRPICNYNEQFDKCMGSCPIILLYDPICGTDEVTYVNK SGLKCAQCCGKGKILH" gene <1124222..>1125825 /locus_tag="ALC62_09165" mRNA join(<1124222..1124243,1124348..1124382,1124753..1124926, 1125017..1125107,1125776..>1125825) /locus_tag="ALC62_09165" /product="hypothetical protein" CDS join(1124222..1124243,1124348..1124382,1124753..1124926, 1125017..1125107,1125776..1125825) /locus_tag="ALC62_09165" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00102.1" /translation="MLFFMLLIAAMPIFIANQEPPLPLPLPIPLGQTSPMLRAIQWGV HADDQFNEEESEIASRLMSYQPTLLEECMGNCPLAAAYDPVCGTDGVTYGNSGILSCA QSCGKDLTMKHPGMCQESATE" gene <1136233..>1136548 /locus_tag="ALC62_09166" mRNA join(<1136233..1136358,1136441..>1136548) /locus_tag="ALC62_09166" /product="hypothetical protein" CDS join(<1136233..1136358,1136441..1136548) /locus_tag="ALC62_09166" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00103.1" /translation="DALEIVQLYNSPMAYKQFNGQERELAFCICNEDFDKCMESCPTI LMNDPTCGTDGVTYANVGELACAQCCGKGKILH" gene complement(<1146665..>1151445) /locus_tag="ALC62_09167" mRNA complement(join(<1146665..1146912,1147058..1147262, 1147489..1147724,1147948..1148102,1148255..1148416, 1148764..1148992,1149259..1149436,1149512..1149600, 1149689..1149853,1149960..1150094,1150338..1150468, 1150815..1150959,1151388..>1151445)) /locus_tag="ALC62_09167" /product="hypothetical protein" CDS complement(join(1146665..1146912,1147058..1147262, 1147489..1147724,1147948..1148102,1148255..1148416, 1148764..1148992,1149259..1149436,1149512..1149600, 1149689..1149853,1149960..1150094,1150338..1150468, 1150815..1150959,1151388..1151445)) /locus_tag="ALC62_09167" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00104.1" /translation="MTTLLFAGTIFVCCLVSSTGWSQSCQDQDTGWEKIVGAKPANAV EAVIYKNGGMSTSNNGIVAPCFDRCKRLNCTAFVIDFARNICYSVQVKSEELIPETNT TLFNKICVTVPSNCKQQRLWQVERTLGAVLKEGQSGWFHQALRRSECYEKCLQAGNEC VSAQFRTGEPLSINDTIGTCSLSRLERGTRPQAYRSSMYRDEYLQDQCHNITTKSYCS YAEFRNVSLPYSDVALPGLDVKQCERRCDRSMDGFMCRAYTVDYSEEKPLCLLHSDST IGLGVSSLVTRPNVVYKEQEPCIDLKVECGESTMTIILTTAEPFIGRMYANGYGDIPT CSVNGIGKNVTILKLPLPKKEEIEKPDIACGLTPAFSINNENRTHILISGIIVIQYNP IIQRLGDQSVRVGCTLDEGGLPGPMNVTVHSNFSFEDPNAGVPPVGSIVVNTSSEAPV VTMRILNESNMDAIVTQLGQKLTLRIEIHPVNGTYDIAAGHLVASSASGESSYLLLDE IGCPTDPATFPALLKDPIDNRSLISTFTAFKFPDSQIVRFNVIVRFCVEECEPAICRG GQPSYGRKRRSIEEPVTAEVTEIFRNLTPVELPLELSIVVQSPVITADHLSSENPDTL LITGGKTDSLFCVNASLALGLLIFWLIIQIALTAGCIIAVRRYRKMAVEAEEDRAQIL ARHLYGIHGGNFEIARRVRWADRNDSSIG" gene <1157178..>1181800 /locus_tag="ALC62_09168" mRNA join(<1157178..1157290,1177033..1177109,1178036..1178109, 1178244..1178345,1178480..1178554,1178655..1178716, 1178811..1178862,1178961..1179152,1179258..1179565, 1179643..1179817,1180314..1180703,1180796..1180850, 1180917..1181065,1181227..1181319,1181642..>1181800) /locus_tag="ALC62_09168" /product="G protein-coupled receptor kinase 1" CDS join(1157178..1157290,1177033..1177109,1178036..1178109, 1178244..1178345,1178480..1178554,1178655..1178716, 1178811..1178862,1178961..1179152,1179258..1179565, 1179643..1179817,1180314..1180703,1180796..1180850, 1180917..1181065,1181227..1181319,1181642..1181800) /locus_tag="ALC62_09168" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0004703 - G-protein coupled receptor kinase activity [Evidence IEA]; GO_function: GO:0004713 - protein tyrosine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0005543 - phospholipid binding [Evidence IEA]; GO_function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0038032 - termination of G-protein coupled receptor signaling pathway [Evidence IEA]" /codon_start=1 /product="G protein-coupled receptor kinase 1" /protein_id="KYN00105.1" /db_xref="InterPro:IPR000239" /db_xref="InterPro:IPR000342" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011993" /db_xref="InterPro:IPR016137" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P32865" /translation="MADLEAVLADVSYLMAMEKSKCTPAARTSKKIILPDPSVRSVMH RYLEKNNEVNFDKIFNQMLGYLLFKDFCETVAEEPIPQLRFYEEIKAYEKLECPEERR KLAREIYDNYIMKELLAHSHEYSQEAVAHVHKYLMKNEVPVDLFEPYIEEIFKHLRGE PFQKFLESDKYTRFCQWKNLELNIQLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYA MKCLDKKRIKMKQGETLALNERTMLSIVSTGMDCPFIVCMTYAFHTVDKLCFILDLMN GGDLHYHLNQRGIFTEPEVKFYAAEMLLGLEHMHSRYIVYRDLKPANILLDEHGHIRI SDLGLAVDFLKKRPHSSVGTHGYMAPEVIAKNTPYDSSADWFSFGCVIFKLLMGRSPF RHLNTKDKHEIDRLTLNMQNVSSLGIPETLSPEMQSLLEGLLQREVSKRLGCRGSGAN EIKAHPFFNGIDWQQVYLLKYTPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLTDADQ ELYKNFSTVISERWQAEVAETVFETINNEADKVENKKKAKQKQRFKTDEKGSDCILHG YIKKLGGPFASAWQTRYAKLYPNRLELHPESATKPELVFLDQVEEVGPDLQLVKGEQC IVMRTKDAKIVLTNADEISLKEWALSLRSAHKCSMEMLGNMARKAGKIYGTERDPLIP ATQRSTNGN" assembly_gap 1158024..1158208 /estimated_length=185 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1158325..>1168026) /locus_tag="ALC62_09169" mRNA complement(join(<1158325..1158483,1167750..1167813, 1167944..>1168026)) /locus_tag="ALC62_09169" /product="hypothetical protein" CDS complement(join(1158325..1158483,1167750..1167813, 1167944..1168026)) /locus_tag="ALC62_09169" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00106.1" /translation="MPTRFDKTSFTLDLHNAIWLQSGMKARRKYFHQATATLSVSVVF CKQFDSVTLTSQIFGVSPAKTEFALPNRLIFTRPKATVNIRGLRTENNANSVNIGKL" assembly_gap 1174551..1174979 /estimated_length=429 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1183363..>1187090) /locus_tag="ALC62_09170" mRNA complement(join(<1183363..1183778,1183987..1184146, 1184222..1184387,1184565..1184764,1184872..1185039, 1185851..1186192,1186681..1186722,1186745..1186900, 1187019..>1187090)) /locus_tag="ALC62_09170" /product="hypothetical protein" CDS complement(join(1183363..1183778,1183987..1184146, 1184222..1184387,1184565..1184764,1184872..1185039, 1185851..1186192,1186681..1186722,1186745..1186900, 1187019..1187090)) /locus_tag="ALC62_09170" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00107.1" /translation="MPGIASATGLLSARIQPIRRPKPKSVELSGCTRAAPFALRPFAG LFNPYPYGCSVLCNHPADCEAKEVVRRAKDTWEGKDKSGIVKNMSAATEGKALLLPEE MEMIRTSLLAVGAGGGGGETAAGNVGGGDGYNAEITASAVPEELFRKYTETDSRPLTP APTLASGPTALTGRTAQEDLPATCNPRERTTLVLDLRTSSQNQQENETFSWHALTLEL PPTPRKNELFICKPTLRPQHSLAIPVPPPSSLSSPIAEKRETSSSRNAEEEIDSDNEQ QPTITRRRGKRLRKRKCRRGSTYGQQTEVRDPLEPTVTQVSQIGNGSRRSSLHVNVGE VDSSTSPKRTSTQVTSHTMPSSFLAPDILKHLCRELDRDKVEAEFSIKRRIALEEALR VKGDAYTLRGSRQTSANPSAENAPRIFSRQAARFELLDSQSLCGLTSLQYLSKHAYVT SGRKLIFGRIFNKFNEEALHSARRISPSDIEEALQEVIGKALTDEQRSYIKSVIGDVT QPLGFREWCGLCAAVERLLCPLPSKESDPPTWLERTDFEALERRLKSAGSVDFTLALL LKEIRNR" gene complement(<1188173..>1192348) /locus_tag="ALC62_09171" mRNA complement(join(<1188173..1188306,1188414..1188533, 1188823..1189025,1192071..>1192348)) /locus_tag="ALC62_09171" /product="39S ribosomal protein L50, mitochondrial" CDS complement(join(1188173..1188306,1188414..1188533, 1188823..1189025,1192071..1192348)) /locus_tag="ALC62_09171" /note="GO_component: GO:0005739 - mitochondrion [Evidence IEA]" /codon_start=1 /product="39S ribosomal protein L50, mitochondrial" /protein_id="KYN00108.1" /db_xref="InterPro:IPR018305" /db_xref="UniProtKB/Swiss-Prot:Q5REH5" /translation="MAAGGDGKQQAQPPGAPPNAHCRSSSCRRRLPSLLLVLPPPPLP VLLLLLTPRRRRRRRQRAWKRWRRSSGMARLPARLKVQHRLSSPRPPARFLRSQKSYE PPEDVAERIDKICESQTIPVNNDTKLEDHVLRFKLFVACEEEFKHSIPNSLLYTIESI GDLKQFYSTPVESTTPYEALRKIDLPKNLHIQQDYHRFHPDTDTMFNGKTAFPKSSTI VTGLKYKKKYHGHTQENPWLDEMMKI" gene <1192525..>1225864 /locus_tag="ALC62_09172" mRNA join(<1192525..1192593,1210528..1210873,1214678..1214846, 1215334..1215479,1215587..1216025,1216453..1216562, 1217311..1217503,1218769..1219339,1219785..1219991, 1220111..1220427,1220767..1221907,1222347..1222689, 1222783..1223093,1223201..1223392,1223537..1223848, 1224571..1224909,1225002..1225283,1225372..1225643, 1225732..>1225864) /locus_tag="ALC62_09172" /product="Mediator of RNA polymerase II transcription subunit 13" CDS join(1192525..1192593,1210528..1210873,1214678..1214846, 1215334..1215479,1215587..1216025,1216453..1216562, 1217311..1217503,1218769..1219339,1219785..1219991, 1220111..1220427,1220767..1221907,1222347..1222689, 1222783..1223093,1223201..1223392,1223537..1223848, 1224571..1224909,1225002..1225283,1225372..1225643, 1225732..1225864) /locus_tag="ALC62_09172" /note="GO_component: GO:0016592 - mediator complex [Evidence IEA]; GO_function: GO:0001104 - RNA polymerase II transcription cofactor activity [Evidence IEA]; GO_process: GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IEA]" /codon_start=1 /product="Mediator of RNA polymerase II transcription subunit 13" /protein_id="KYN00109.1" /db_xref="InterPro:IPR009401" /db_xref="InterPro:IPR021643" /db_xref="UniProtKB/Swiss-Prot:Q7KTX8" /translation="MTHPSHQTNGASLEDCHTNFFALTSLCGIKWRKLVWGEVAGGFG GTPLEDPVLSSFSRCLAGDILCVWRRVAATPATSGPAAAATTASAPGAGIFDLGIAPS PAPPPLSLTAAKELWIFWYGEEPDLSGLVSPELIACESEQGSWESGLSYECRSLLFKA LHNLIERCLLSRDFVRLGKWFVQPYNGYEKHRCSSSHLSFSFAFFVHGESTVCASVDV RQHPAVRHLTKTCLQRTQTSQSGVKVILAPYGLAGTLTGQVSRMDSQLLEEWKHFYPI STGSNPETGLPPLVEVLVGGVRMRYPSCYVLVTDMDDTPPETPLSPPSSPVTCERPLL TQQELSAATELPERVWAECTLSSPVSASKTESSTEPGTWTFVEPTQKSSCTCSCSNSK AILNDKLVNVFIKLYFKQVKLYLHIYNFFQKHINCAFARKRDVKCIGCRYTTPGGWKS LASSQVQRERVDKGGRRVVPFHRRCTTQWDACPSVPANAPRSVLSRTEAPSTPPGGPP SYSRGPPTGGDCLPVPSVGSPGSPAPSPLLTPHSEPASVPPAEPTMPTLSPQPPPSHT NTALPLTPSQGPKSISSACNNQVHSPSVPGPVLKRPILISREYEGALLEDEQPLSWLY DYSLQEAWLNHPVKRFKSMNISAPPINRSNVLYPPMNSQTLQSQAPKLEIKQEPIAVG ECIGRRTDPYEFDATGEENGTNVDGLRRQRDDPTKPGSLFTSEGLQPSYKDLDQIFDN SDPDTSSDETNLNQLQIQTPPGSNKSGGLHEETRVDGANKNNNRGVTVLRPEELSKMF PTPPSLEHNPVASPCQLSDPLMDQTELLMPSRPLRHLPDIYPNMGSPQEEPIDDWSYV PPPPPYDQPSPATSTTSSYLNKNLNSIEADTPGPARAPESNSLVVNILLGDTALNIFR DHNFDSCSLCVCNAGPKVVGNIKGADAGVYLSNSWVGSALFQDDDQIRCSCGFSAVVN RRLAHRAGLFYEDEMEITGVAEDPAEKKKGSLTAVACPGVKTTPEGLDTIPPNVLELL REQCLIVQSSASSLYRAARICATVKSYPTLTPTVNTLEFNDGNEVCVAALDQGKLDGA HNERATRVNGVHRWVFLRARGPQCSGDIVRMMRSLQPLLQDAVQKKCTTRMWEAPYTV TGPLTWRQFHRLAGRGTDDRCEPQPIPALVVGYDRDWLSLSPYAVCFWEKLSLEPFAG PRDVAYVVVAPDSDCIVSRVKSFFRELSCTYEICRLGRHTPISKQLRDGILRVGKSTM QKLAKQPMDDWFKFLGENHIGELLRLYAQVCNHRLAPYLTQIIQDRSLLDPGDSQSAN KQQQQQSTTIPVPDTMPATPDVLSTKPESVEGENPRSETPSSSTATNQTTTNTTGNTT PTTQPTSNTTPITTTTGPDEEEIEPPAIVVYFVEPFSLGGTEDPDRRRLAILALLRAY SSAINSMPENMRSNIHVQIISLESIMELGRARERRKIQDEMRALALNVFLQGRRLLNH NSTVKSLTGFGTAAAADIFLKSKDERNRAPYRLYAPAFVLAPLRAKSEAPESFGMPRP EECAVLYLSYCLSEDQSWLLAAATDDRGEIFETATINIDIPNRKRRKRASARRIGLQK LMDFILGVMSQGVQPWRLVVGRVGRIGHGELKGWSWLLSRKALLKASKHLKEICGQCS LLYPSAAPCVLSACLVSLEPDSTLRLMADQFTPDERFSQASVNCQLSTPQDVTCTHIL VFPTSATTQSSQTAFQEQHNVPELGDDELFSALNDDMPEGMEGMGDFNDIFNVWPEPG AGGGQSPSGSPHRPEGSPHGGDGGGSGLGNHDGPGSPFPCSNTPRIATTEQAEEVGTL LQQPLALGYLVSTAPTGRMPPWFWAACPHLENVCPVFLKNALHLHSPAIQQNSDDLLQ QQNAPTAHPLDSQYTTDVLRYVLEGYNALSWLALDANTKDRLSCLPVHVQALMHLYHA TAALV" assembly_gap 1193376..1193809 /estimated_length=434 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1202317..1202436 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1205970..1205981 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1228072..>1230877) /locus_tag="ALC62_09173" mRNA complement(join(<1228072..1228615,1229066..1229204, 1229282..1229489,1230550..1230725,1230847..>1230877)) /locus_tag="ALC62_09173" /product="Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1" CDS complement(join(1228072..1228615,1229066..1229204, 1229282..1229489,1230550..1230725,1230847..1230877)) /locus_tag="ALC62_09173" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]" /codon_start=1 /product="Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1" /protein_id="KYN00110.1" /db_xref="InterPro:IPR003378" /db_xref="UniProtKB/Swiss-Prot:Q7K237" /translation="MVQQRLPSFDGGRSGRRFILTLVAGTVFGFLSACLLIASTRDVP HMFSWVPGGSDLSRDPHHYSEMDSEIGPETEVKFHGDDEDFHKGEDRIAQDMARKVRV LCWIMTGPKNHQSKARHVKATWGKRCNVLLFMSSAEDASLPTVVLPVKEGRDNLWAKT KEAFKYAYEKYKDKVDWFMKADDDTYVVVENLRYMLSSYNPNSSLYFGCRFKPFVKQG YMSGGAGYVLSKEGLRKFVEEGLPDKTKCRPDNGGAEDVEMGKCLEKVGVRAMDTRDP HGRGRFFPFVPEHHLIPNHVDKNFWYWKYIYYDTKDGLNCCSDSAVSFHYVLPNMMYV LEYLIYHLRPYGISHSLERPSPDRPSTLIEY" assembly_gap 1235431..1237263 /estimated_length=1833 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1238418..>1239623 /locus_tag="ALC62_09174" mRNA join(<1238418..1238510,1238581..1238814,1239525..>1239623) /locus_tag="ALC62_09174" /product="Trafficking protein particle complex subunit 2" CDS join(<1238418..1238510,1238581..1238814,1239525..1239623) /locus_tag="ALC62_09174" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="Trafficking protein particle complex subunit 2" /protein_id="KYN00111.1" /db_xref="InterPro:IPR006722" /db_xref="InterPro:IPR011012" /db_xref="UniProtKB/Swiss-Prot:Q5RES6" /translation="TMSANYYFAIVGHADNPLFEIEFNNAGKDAKKEDHSHLNQFIAH AALDLVDEHTWKTTNMHLKVVDKFNQWFVSAFVTATHIRFVMVHDSKNEDGIKNFFNE MYETYIKYSMNPFYKLNTPIKSIGFEKKAQLYGRKYLSS" gene complement(<1240015..>1241902) /locus_tag="ALC62_09175" mRNA complement(join(<1240015..1240214,1240292..1240642, 1240962..1241325,1241405..1241485,1241578..1241706, 1241819..>1241902)) /locus_tag="ALC62_09175" /product="Transcription initiation factor TFIID subunit 7" CDS complement(join(1240015..1240214,1240292..1240642, 1240962..1241325,1241405..1241485,1241578..1241706, 1241819..1241902)) /locus_tag="ALC62_09175" /note="GO_component: GO:0005669 - transcription factor TFIID complex [Evidence IEA]; GO_process: GO:0006367 - transcription initiation from RNA polymerase II promoter [Evidence IEA]" /codon_start=1 /product="Transcription initiation factor TFIID subunit 7" /protein_id="KYN00112.1" /db_xref="InterPro:IPR006751" /db_xref="UniProtKB/Swiss-Prot:Q9VHY5" /translation="MNRHPNTDKNRNEPQVELESQFVMRLPPEPARVLREALRNSLPL KDRLTIKLENDMRYGEVRLDHWLLHAKVVDLPTIVESLKTIDNKSFYKTADICQVVIC KEEEDHTATDEESPVKQKKKDPNKVDKKFLWPHGITPSTKNVRRRRFRKTLKKKYVEA PEIEKEVKRLLRVDNDAVNVKWEVICEDEDTSKPSKVSSSGTVKTKREINGNMSQSLD VAEHDIFGEAVSDSEDDDEEANINVMELDENSRLSADSRVSDSNSMQAAYSERSSNNA TTSSGLVTEFSKDMFHNDTNGDMETEKPQGETSPLKPPKLEQFHSEYIIPESPTLVSI SKDSRLATLHAELAELRQRRQQQEIEIANIENVKLRQRFQEILDNLLTQEMQKVQEVK MMHTHIFYFI" assembly_gap 1246295..1247463 /estimated_length=1169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1252135..1255456 /estimated_length=3322 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1258662..>1273987 /locus_tag="ALC62_09176" mRNA join(<1258662..1258904,1259507..1259743,1259840..1259927, 1260003..1260223,1260303..1260830,1260857..1260904, 1273299..1273522,1273855..>1273987) /locus_tag="ALC62_09176" /product="Sialin" CDS join(<1258662..1258904,1259507..1259743,1259840..1259927, 1260003..1260223,1260303..1260830,1260857..1260904, 1273299..1273522,1273855..1273987) /locus_tag="ALC62_09176" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0006184 - GTP catabolic process [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Sialin" /protein_id="KYN00113.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR020849" /db_xref="UniProtKB/Swiss-Prot:Q9NRA2" /translation="NVMFFSVNTLQIPADTKSCIKARHTLGFLGFLGFALVYAMRVNL SVAIVSMVNQTAIPHTEDNDTSDVCPKTKPINGTFIPSAGEFAWNEKTQGIILGAFFL GYVTTNVPGGRMAEKMGGKLIYGLGVFLTAVLTVISPFAAYWGLVPFLVVRVAEGFTE GVTFPAMHSMLAHWVPPLERSKFAAIVYAGSNFGTVISLPVSGWLCSLELWGGWPLAF YLFGGLGLVWYVFWLIFVYDTPSQHTNIDPSEKAYIEASVEKKHENDPGVPWLSVFTS LPIWAIAITQCGQSWAFYTLLTELPTYMDKILHLNVQQNAFLSALPYLSAWLVGLGIS SFADALLARRLISPLASFKLWNTVSSLGPSLSFIGAIWAGCDRMTVMLMLAGLGSLQG AVYAGNQMNHIALAPRYAGTLYGLTNAAANACGFLAPYVIGSIVEGHFKCFVRMYVHY FFFCIDTFSRAQTWVKELQRQASPSIVIALAGNKADLANKRVVEYDEAQTYADENGLL FMETSAKTAMNVNDIFLAIGELKIFLFTAKKLPKNEQSGSASTSGQGRRLVESDGQKA ATGNCCK" assembly_gap 1262707..1262724 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1263174..>1267521) /locus_tag="ALC62_09177" mRNA complement(join(<1263174..1263401,1263476..1263727, 1263943..1264182,1264272..1264509,1264590..1264795, 1264867..1265196,1265322..1265496,1265584..1266077, 1267103..1267324,1267420..>1267521)) /locus_tag="ALC62_09177" /product="Protein CIP2A" CDS complement(join(1263174..1263401,1263476..1263727, 1263943..1264182,1264272..1264509,1264590..1264795, 1264867..1265196,1265322..1265496,1265584..1266077, 1267103..1267324,1267420..1267521)) /locus_tag="ALC62_09177" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Protein CIP2A" /protein_id="KYN00114.1" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q8TCG1" /translation="MEKYQHMRAFISAALDYTKHPSENVISAIQRSLGVISASLDLSI FDPGSCVTAEFYVSMYELMNSVGSRSTLIWSAVDVLQNACRNVPARQALIHTYKFAPI LARLLEANLTTEKRIRVLKLLQELTYGIKISWQETHLPYLISTLTQWVVQSKEEEIIA LSLGVLVNLCYKNLPAVYTLMRTVNTKAFIRTLVKFQAHVNTSVQCCKLLIILEPTNT SMYEKYITDFASVTFINLGKAMKQKDVLLLRHIVDFFNDIGQNEHWRNVLLTYSNYGK DIENILATLEENTDPECVALMMEFLLLLVKLKLTAIAPLYPACIKSAMMWVPVEQVCS KALALIRSVIIDSRRTRTCVEVLTEIDPSVLMLITNQEDEVNDQSGSQNAEMKQAELM QLFQEMIKTPALKKKIISSFNENAMRKLFNHVLDNELSTSGNWTKNFMQNTSTNLYIH ALALTADLAANHSNWLTLYSELLSKKQIQMIIALALFTGDGEVKQKALQLTSSIGFPQ ECISAVALCMKELEPLILVQNTNNNMLEVSNKASLNYTGNELAPLFSIGQEERLDAFL TKLESNQINDIPTSAVMELYEYKLATMRHSERAMQSSLEAANNHATSLQHRLAQIVVE SSRLHQLLFDTQQSLEGIKAEKCALTEKFSEKENQSQKAFLLKKQENESLKKIVAEKS TNLENLNEKLIQCTKDLEASNNKIDILNKKIKELDNECLIAETKATDMGNKNHELSKL LQKMQDSLSKKEQILEKKSAEIEANQSDISALKQEIEQMKHMLQTFEQAILEKDRNIQ RMKGELKELSRMRDMIFELTAKNKDDLNSS" gene complement(<1278487..>1290951) /locus_tag="ALC62_09178" mRNA complement(join(<1278487..1278693,1278761..1278953, 1279061..1279308,1279450..1279596,1279672..1279860, 1279946..1280083,1280191..1280271,1280360..1280605, 1280723..1281064,1281149..1281196,1281399..1281542, 1281632..1281715,1282239..1282334,1282411..1282473, 1282729..1282824,1282988..1283188,1283209..1283298, 1283568..1283627,1283714..1283806,1283875..1284033, 1284105..1284197,1284323..1284406,1284847..1284987, 1285059..1285154,1285245..1285355,1285436..1285567, 1285719..1285814,1285893..1286030,1286105..1286155, 1286259..1286405,1286546..1286665,1287178..1287222, 1288216..1288356,1288485..1288694,1288972..1289149, 1289350..1289429,1289759..1289774,1290146..1290339, 1290411..1290593,1290742..>1290951)) /locus_tag="ALC62_09178" /product="hypothetical protein" CDS complement(join(1278487..1278693,1278761..1278953, 1279061..1279308,1279450..1279596,1279672..1279860, 1279946..1280083,1280191..1280271,1280360..1280605, 1280723..1281064,1281149..1281196,1281399..1281542, 1281632..1281715,1282239..1282334,1282411..1282473, 1282729..1282824,1282988..1283188,1283209..1283298, 1283568..1283627,1283714..1283806,1283875..1284033, 1284105..1284197,1284323..1284406,1284847..1284987, 1285059..1285154,1285245..1285355,1285436..1285567, 1285719..1285814,1285893..1286030,1286105..1286155, 1286259..1286405,1286546..1286665,1287178..1287222, 1288216..1288356,1288485..1288694,1288972..1289149, 1289350..1289429,1289759..1289774,1290146..1290339, 1290411..1290593,1290742..1290951)) /locus_tag="ALC62_09178" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00115.1" /translation="MYSISSNLSSSTDASDVPTVKRDPDCRTADVGEPCGEIEGLRIL DEFRKLYESRIEKIDQESIGDSDRVSMKLQVMSNWIKDLGEQNAMLVHTVEDLEQAAC SRVKLLDEKLKQSSQMVVDNLTRSDYSEKALNTLSNRVSQLEKDEEYLQQKIEYLQSD IRGLLEVIRRARRQNVWSLEGIKFFEIQPEDIPVPDCICNQEQTDTDHIKSLNLQIEQ LQENESKMIRSQLELEGKIADLTTELSIKDDTIKKYVSRLQCFCEKLKEHAKQTNEVI NYPLVFDQDSNIILTPDILESVLDAKDRENKNLLRQLQDVESKLIVYSYENNVDTVNL QLQLEEKCKKVQQLEDKISRLEKEAAETKDTLTAEIVALEKQNYHANMGNLLKDDLIK EMRKELKQTTLEDTSRKVCIDVNNFPEDEFITFLRNTKTHVQKECEILSDLKLELGKF VNKLTTKDEMDDCTIPNNCISKNKLCTSDMSDKLVNCIEIITKIDLERQKEITVFDCM IKKEENRCACGDSKNIKSNMNNARQFKLMEEFRVCTVEAQAATEDIREEISTVVSTFN SRHQNYEELNKMVTSVQSYLTRTREGLIETINRLELQEEERLRHSERIVSGNLKLKDT KNEINHVQSELSRYINDMKENIQGCNESEYTEAYINNDLLTMVTEEVEQILTNLQLFQ TQGGCVTSILKGLRSQLCTIDSSLKDLQKKTCEVLLNNEIAKTTFCERECRLAKFEEE IDCAHTKMQDVLETFLSTKQEEKEVNDIIKTKEDLHKLRKDYDDLKLNMIQQTCQIKY DERLNKWKNRITDLEDQIRMLQHEAKCKQEAINFLKNNIHSIEKELIATRTKAENYRQ CHSKDNIELKKKIIELENTIKTQKEVENDLRKNLNNVANIKKSAEISNAFHTECDTET TLLRCDYPSKHENISHLFKTIQDAVQSAKLAVQDFESELKKLITLILSNATEITMNLY LQIRDESSLSSVSAKSAMTLTDSLGKCREKLDTCFHELSKLKSAVYSKEKLLENMEEV VRIQRNSLTMSQAEVKDLHQKLQEKIDKQSLTIVQYEREKNELLKQNELQIQTIGHLQ NAVVEAKRNLDQMTHKTMSDLCKKDETIRQLMIRIDETQDQYNECFTEATNQDILLDL QRDAIESLHERIRCLEYNKRLIAITLHAIYYSILSGIQEQIRDHVKNFRELKWKMDSF MQTKDCSKNKCTNKSCIIYLEDKNCDTRDLECSSSTVKKTEIKNIAEIQELKAELQKM KDTECDLRCENQQLETNLQHHLSETDSLMKKIEQRETEYEELLLKLENGKKEINMLND RVINSEEIIKNQSHEVENLRKKLLINDQQMENLSEQNISEHEMLTVLCDRINSLKILL QEKSDNMVKLQADYELLKNENSILKNQNNIIQAQTKEDILKLKERLKEARIKLRQTEN NCHQMVEDLNKIRKQLISATKRENDLQESLAIMKKDYCSKIEEIENEAVRFRDLVNKL SEELEETKRILASKDIELCQAQDECKNYADHLNTTRQDLEREKEELTRTENVNRDLIQ QLQEYMKETYHLDRQKISLERDNSTYITELQDMCKSLHELKKECHLKTRSLTYMSADL TETAMSRSKLCKESQYIVSCIRDCMEQQKKYNETLSKNLKNKQQLIMQLVFEKKALLI KIRKMKRINLLAQKLKRTHKLAARSCRKAHINGYISPSITANQTTDTDLASSLNYTNS RKKYSTKPIKIGRCTSTCGNSWWFPKMEHLINEVRKNNRWWNENFKNGTESDTSLEDN RDYGYQSSSTSK" gene <1292322..>1293953 /locus_tag="ALC62_09179" mRNA join(<1292322..1292553,1292622..1292842,1293302..1293588, 1293665..>1293953) /locus_tag="ALC62_09179" /product="Cyclin-Y" CDS join(1292322..1292553,1292622..1292842,1293302..1293588, 1293665..1293953) /locus_tag="ALC62_09179" /note="GO_function: GO:0019901 - protein kinase binding [Evidence IEA]; GO_process: GO:0000079 - regulation of cyclin-dependent protein kinase activity [Evidence IEA]" /codon_start=1 /product="Cyclin-Y" /protein_id="KYN00116.1" /db_xref="InterPro:IPR006671" /db_xref="InterPro:IPR012399" /db_xref="InterPro:IPR013763" /db_xref="UniProtKB/Swiss-Prot:Q8ND76" /translation="MGNKNSCCVYSSPQVGRKEVGLESTTCNLEEHLPEGGISVNNLQ HISEREPEDWDSDPSLHPCAGTIFMERSKQAIENGMVRKKSQHQIADTRPLKKSSSCS TIYLDDSTVSQPNLKNTVKCVALAVYYHIKNRTSQRQIDIFDEKLHPLTRDGVSEDYD KHNPEHKQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEIDITPANWKRIVLGAI LLASKVWDDQAVWNVDYCQILKDITVEDMNELERQFLEMLQFNINVPSSVYAKYYFDL RTLAEANELTFPSEPLSKEKAQKLEAMSRVYEDKVTAEALRTGIKKWSSLDNVCIGGP RRSIAILS" gene complement(<1298770..>1310706) /locus_tag="ALC62_09180" mRNA complement(join(<1298770..1298983,1299095..1299302, 1299681..1299806,1299889..1299993,1300664..1300916, 1301152..1302335,1302638..1302738,1302904..1303302, 1304645..1305541,1305782..1306663,1306784..1307099, 1307189..1308041,1308129..1308533,1308550..1308557, 1308601..1308722,1308798..1308914,1309269..1309385, 1309483..1309655,1309741..1309924,1310132..1310190, 1310536..>1310706)) /locus_tag="ALC62_09180" /product="Activating molecule in BECN1-regulated autophagy protein 1" CDS complement(join(1298770..1298983,1299095..1299302, 1299681..1299806,1299889..1299993,1300664..1300916, 1301152..1302335,1302638..1302738,1302904..1303302, 1304645..1305541,1305782..1306663,1306784..1307099, 1307189..1308041,1308129..1308533,1308550..1308557, 1308601..1308722,1308798..1308914,1309269..1309385, 1309483..1309655,1309741..1309924,1310132..1310190, 1310536..1310706)) /locus_tag="ALC62_09180" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Activating molecule in BECN1-regulated autophagy protein 1" /protein_id="KYN00117.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="UniProtKB/Swiss-Prot:A2AH22" /translation="MGKVKKRPELLHCSKSHNILRNLMLRDFGLHTTHKTSTRELEPI AEANFVLRDHKELKCELPGFPRATFLMVFSPDGTMVASTHGNHNVYITEITTGKNIRT LSGHPRTPWCIAFHPSSSQILASGCLGGQVRVWDLSGGSEIWNAESNTVIASLAFHPF ERLLVIATYNEIHFWDWSKSQPFAVTATKTDKEKVRYVAFDSLGRKLITGIANTPQVQ SQWDRAPVGQLLRTSLMYQPRENFPDIELSPFHLWNHGSFYGRGSADSNTADRTSRAY LFMRRGHEMSSFSRFANQQFRNSTRQEARFQRRRNLSEANILTIEICHNSFIPYDVEL NQTRETTSPSITRNPPRPTGNPANTDNVDNRSADDSNDDDLPSSLRSRDRESNTINDS HPRDELYERLNNVWVGVDERLRGTNSQDPERRINLCYRDLVDQYVTLVRRYFDVSRNR DTIDRGTDPMDMPEASSSNSEESSNRNESATELSIRRLRNELNSSARANNTNLERLQR CQRLLMERSEQEEIGTTLQNLREALNAAAENNSSCLVRLQKLRKRLQRQTATLFEHSN NRNSRLQLLRNALNDEIEALNNMEAQFTNTSSRIERLRDEFTMYGILPRNRHIVTDSS QMNLSNAEWRTLTSNDGQMPSTSSMPSVLSSRLHDLESNVLPGTSYVQENEERGTSWS NANNSENASTSSRSTGRATRRRFNDLNTEDEPPRQRKRKLGPIEFSMPMPLSYIEDSS SSSDEGYSRASTSRNGASNFTVSTHSAFQPNVPKSVAQRMSSSSQNQETSTNSSRLDE TDRNNLPVNLNNESNEDNDQDNRTSRTMRNTQETRSQELSRRQGNSPLLRRVIDVLQI LRNLHADRMENNNTTQQVLLDDSENGYWLLEENSNSDSNLDDTNSNTNSNSRRWTSRW IRLDTSSRNSEYPNDSPNEQSLSRPFSEDVEQNTNDRHREQRNQLSPVSANPTRYEQP PLFPFRSLRENQSQRLEQNQTPIISSSDSTSLQTQTSNSDATHTTLAGFTELSRMVND PVVTRIANVTSREDESTVSDRQQPPPPLPPPPPPPPPPSQQQQQQQQQQNQDQRNADD PDLDYVIDPIMLGADNIDPRESSLGVRQGIQLLNRHINNINNMHRLCRARLEIVQLCQ VRKMWEDLQRQIRSLHVTVRVERQNDNQTETQRDNATSNPGPSTSVASSSNESARNFK KALLENYQRESEGDGDTRSYDQSQPSTSSGVTGLERNHENEPMSSTRNIEESTNISLS NLLPSDTELRRMQCLKLNEMLDGLYARLTSRCQNCDSRDTRAMNDHTYSSLTTDGDVQ LPSMSSVVSNIGANSNLPAVTAITTTESEPLPSISSFVSSLDRAGPSRSTQASDTNID YSTIGNNNDTNDDNNINFDPPMEYPTNQPGTSTRTTASMSLYKSTMDGINRMHGLSRN MMLRYRMKRSLRSHRFMQRLRSLSTNNSFRQCEHIRRPWYLRRNTQNNGNGNSNNDGL DVDIDIRDRMLGSNTSKRLQKMILRLEMLVRQQRALARNSGRRLNGNNRQSETNRDND NREMEEIREATRLRARQVLGLMVRSLIQFFEVRRSGNGSQSNVLYEQMYKLYVLLHLA LELTDLLLAQLVITRRELESSQYGPFPSDLSVDNQNRSDTRNNSVDNSLQTESPRRAN DNAPRRNTYRERLSRNRAEMPSAEEFLSLHGNNIRYRILARRLKRLSYHRRAIQIING FSGNQTSNTAAGRSSGNGDDNNYDDNTQNEDNRQSTSENALSAEVQSIVERIQSSSSI DNDDRSETRVGVENHTMNAANESRNSNESYRRSYRNATVSEPAVRRINESRDPQETDS ATHANESWRNCLVYTSSGDEQSARSSHQRSRWTRQYARVACPSLLERPFLHRYGNSDS NNNRRFPQSREGSSLRREFNVPELQVNNVPVNDLDNLSSNPRRRQNTPPTPPHTPPPY LINNILHNADNRNNDRTNESTDQPGPSWAGQSNNNRTRVLTPTFLTLWRNRVGPTWIP RYTEFVNNSGLVHNVRIGNATNSNNGGSGGDDGGGGGGRNEGRGAGQSGGVGGGGGTG GGRGGGKHIPMGIPFNPALEIQTYRVQAWDFSNGDIPDITDSEKNVVVRECKIHNDAS IDISTDGKLLATLLQSGRINVSTTLGIYSLQWETLGEKIHSTNIDQTVVSVSISPTQQ HLLVGLARRIHVPARPFPMALIYKLMEKQSDDEKNVSPHIQNWRIRERNEFDMDIKRH RESMVLIRELFQNCREVSSYLSLNCIRWAPQPGQGMVYATNTGQLNILQ" gene complement(<1312310..>1315014) /locus_tag="ALC62_09181" mRNA complement(join(<1312310..1312522,1312702..1312868, 1313025..1313162,1313262..1313400,1313483..1313629, 1313708..1313783,1313865..1314070,1314191..1314373, 1314700..>1315014)) /locus_tag="ALC62_09181" /product="UTP--glucose-1-phosphate uridylyltransferase" CDS complement(join(1312310..1312522,1312702..1312868, 1313025..1313162,1313262..1313400,1313483..1313629, 1313708..1313783,1313865..1314070,1314191..1314373, 1314700..1315014)) /locus_tag="ALC62_09181" /note="GO_function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="UTP--glucose-1-phosphate uridylyltransferase" /protein_id="KYN00118.1" /db_xref="InterPro:IPR002618" /db_xref="InterPro:IPR016267" /db_xref="UniProtKB/Swiss-Prot:Q07130" /translation="MDWEDFAKRIGKKKFRSSYNTEETPQARGHQRSSSDTQAFRERT KRDARDELQRELEKLQATARENKATIFSRQFAGFQHLFERFLQEEGPSLEWNHIQRLS EDAVKNYNSLPSPETNEVKELLDKLVVVKLNGGLGTSMGCHGPKSVIAVRNGLTFLDL TVQQIEHLNKTYNANVPLILMNSFNTDDDTQRIIRKYKGIDIDIYTFNQSCYPRINRD SLLPIAKHCQVDEDIEAWYPPGHGDFYESFQNSGLLKKFIHEGREYCFISNIDNLGAT VDIKILKSLFSKSPEPPLEFVMEVTDKTRADVKGGTLIKYEDKLRLLEIAQVPKDHID DFKSVKTFKYFNTNNLWIKLNAIERVLEQKAMNMEIIVNNKTFTNGLNIIQLETAVGA AMKSFEGSIGINVPRSRFLPVKKTSDLMLVMSNLYTLRNGSLVMSPQRMFPTTPLIKL GDNHFSKVKEFLTRFPTIPDLLELDHLTVSGDVTFGKGVTLKGTVIIIANHGERIDLP SGTVLENKIVSGNLRILDH" assembly_gap 1322344..1323082 /estimated_length=739 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1326988..>1328390 /locus_tag="ALC62_09182" mRNA join(<1326988..1327363,1327469..1327614,1327720..1328056, 1328206..>1328390) /locus_tag="ALC62_09182" /product="Scavenger mRNA-decapping enzyme DcpS" CDS join(1326988..1327363,1327469..1327614,1327720..1328056, 1328206..1328390) /locus_tag="ALC62_09182" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_process: GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA [Evidence IEA]" /codon_start=1 /product="Scavenger mRNA-decapping enzyme DcpS" /protein_id="KYN00119.1" /db_xref="InterPro:IPR008594" /db_xref="InterPro:IPR011145" /db_xref="InterPro:IPR011146" /db_xref="UniProtKB/Swiss-Prot:Q8MJJ7" /translation="MAEKCTSTNFGVDRPPAKKVKLDEESTDVVEKNLSEIDTSETEL DLSDFKVIKVLQNNCARKLICMEGTFENREGQAVVLLEQKSFPHDKVVLKNDFFDGKT IFRKVFTNDVYRNYNCFPTEENNGLHVTVIYPASQTHIDKYKRQELYVIDETYELYQQ VTLPYIESMSLSLEWITNILEHKAEQESIIYEDSDKDNGFVLVTDFKWDGQMDTLKLL ALPFKKIKSLRELNGSHLSLLKNIRDAGTAAISKKFNIPTSQLRIYFHYQPSYYYLHV HFCYLMFEAPGIYVEKAHLLSTVIRNLELMSDYYTKAVLTYVVFKGSPLYEKFKSHGA LQTSTCETQETVI" gene complement(<1335524..>1341114) /locus_tag="ALC62_09183" mRNA complement(join(<1335524..1335786,1335988..1336181, 1336297..1336575,1337870..1338046,1338246..1338485, 1338577..1338835,1338935..1339148,1339257..1339323, 1339471..1339600,1339781..1339907,1339998..1340139, 1341035..>1341114)) /locus_tag="ALC62_09183" /product="Macoilin" CDS complement(join(1335524..1335786,1335988..1336181, 1336297..1336575,1337870..1338046,1338246..1338485, 1338577..1338835,1338935..1339148,1339257..1339323, 1339471..1339600,1339781..1339907,1339998..1340139, 1341035..1341114)) /locus_tag="ALC62_09183" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Macoilin" /protein_id="KYN00120.1" /db_xref="InterPro:IPR019130" /db_xref="UniProtKB/Swiss-Prot:Q8N5G2" /translation="MKRRNVECGKLRRPLKRNKLTEGIYGSTLLYLKFLLLWAMVILA DFILEFRFEFLWPFWLLLRSVYDSFKYQGLAFSVFFICIALTSDMICFFFIPVHWLFF AASTYVWVQYVWHTDKGVCLPTVMLWLLFLYIEAAVRLRDLRHMPFHLDLCRPFAAHC IGYPVVTLGFGFKSYVGYRMRQRKQKDVAKENEFYLQLLQQALPLEQQAMSMQQIQSQ MQPQTQQVTASLEQNVKTQTHKLSPQYNPSPEKSREGNNNSIETNVQNGGVHTSSQVT SQTQTATTKSTHRKSLDKSEKQEEQHNKHNVSNNSPSDKSDKKFIHSNGSTVSHSDIQ LIERVGSVNDFDINEVEKDKSIKGCGHTTIKSQTNGSVAGKWNNVKENRDSSSTTNVQ RERKTRQVKNTSEITVEQQKQQDDYYQRLLVCRRLEADIKRLKSDLQSSRQMEQELRS QINVLLNGERQAKGDIQQLQHDNDQLQSKLHGLVTARQLDKQTMSSLEKRIAEERKQR NACEASLLSERRARRAAEEARSAIPPPPPPLIRQECTDVCKNRRSQIEQDLKNLRREL KLKEERCNALENDTVRCKENHRECEILLSAINALQDKNAHLENSLSAETRIKLDLFSA LGEVKRQLEIREGLIRSQEKEIEMLKTKIAQDLAVMPQDTFGPTPTCATSKLRLNSEV RVTGTKIRSTESPCPGCTVSNLDPNATAYTPKSSLIASTEA" gene <1346136..>1346720 /locus_tag="ALC62_09184" mRNA <1346136..>1346720 /locus_tag="ALC62_09184" /product="hypothetical protein" CDS 1346136..1346720 /locus_tag="ALC62_09184" /codon_start=1 /product="hypothetical protein" /protein_id="KYN00121.1" /db_xref="UniProtKB/Swiss-Prot:Q2KI99" /translation="MAYSFYYGYLRLTLPSTETDRKGIIEKIENFEDYHNVTFPVHKL FLLIPSSGSIPPNLKEASYQWMENVHELEEEKRNRAGNIGRIYRNNAYKIYPGGRNSK NNPVYIVVEGATPLLTYYEVEKHNHSESFAYKLYKDKIIDKFYTKLQEILQSDPETRN LCELIYYNDFDAQGKRVNVASILLERISQITKSA" gene complement(<1349545..>1354678) /locus_tag="ALC62_09185" mRNA complement(join(<1349545..1349594,1349726..1349881, 1354537..>1354678)) /locus_tag="ALC62_09185" /product="Eukaryotic translation initiation factor 4E-binding protein 2" CDS complement(join(1349545..1349594,1349726..1349881, 1354537..1354678)) /locus_tag="ALC62_09185" /note="GO_function: GO:0008190 - eukaryotic initiation factor 4E binding [Evidence IEA]; GO_process: GO:0045947 - negative regulation of translational initiation [Evidence IEA]" /codon_start=1 /product="Eukaryotic translation initiation factor 4E-binding protein 2" /protein_id="KYN00122.1" /db_xref="InterPro:IPR008606" /db_xref="UniProtKB/Swiss-Prot:P70445" /translation="MSASPIARQATQSQSIPSKRVIIHDPNQLPVDYSSTPGGTLYST TPGGTRIVYERAFLMNLRNSPISRTPPRNPLTIPSELLKGNTPVITKDPAKNTNKDSV MIEESAEQFEMDM" CONTIG join(LKEX01018046.1:1..186742,gap(50),LKEX01018047.1:1..30598, gap(955),LKEX01018048.1:1..67736,gap(26),LKEX01018049.1:1..32853, gap(57),LKEX01018050.1:1..22966,gap(47),LKEX01018051.1:1..198356, gap(194),LKEX01018052.1:1..60817,gap(98),LKEX01018053.1:1..20738, gap(40),LKEX01018054.1:1..22535,gap(53),LKEX01018055.1:1..295643, gap(2856),LKEX01018056.1:1..6796,gap(470),LKEX01018057.1:1..28954, gap(651),LKEX01018058.1:1..177792,gap(185),LKEX01018059.1:1..16342, gap(429),LKEX01018060.1:1..18396,gap(434),LKEX01018061.1:1..8507, gap(120),LKEX01018062.1:1..3533,gap(12),LKEX01018063.1:1..29449, gap(1833),LKEX01018064.1:1..9031,gap(1169),LKEX01018065.1:1..4671, gap(3322),LKEX01018066.1:1..7250,gap(18),LKEX01018067.1:1..59619, gap(739),LKEX01018068.1:1..33137) //