LOCUS       KQ971360               67392 bp    DNA     linear   CON 10-MAR-2016
DEFINITION  Tribolium castaneum strain Georgia GA2 linkage group LG8 genomic
            scaffold scaffold_seqid55, whole genome shotgun sequence.
ACCESSION   KQ971360 AAJJ02000000
VERSION     KQ971360.1
DBLINK      BioProject: PRJNA12540
            BioSample: SAMN02953634
KEYWORDS    WGS.
SOURCE      Tribolium castaneum (red flour beetle)
  ORGANISM  Tribolium castaneum
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
            Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis;
            Tribolium.
REFERENCE   1  (bases 1 to 67392)
  AUTHORS   Richards,S., Gibbs,R.A., Weinstock,G.M., Brown,S.J., Denell,R.,
            Beeman,R.W., Gibbs,R., Beeman,R.W., Brown,S.J., Bucher,G.,
            Friedrich,M., Grimmelikhuijzen,C.J., Klingler,M., Lorenzen,M.,
            Richards,S., Roth,S., Schroder,R., Tautz,D., Zdobnov,E.M.,
            Muzny,D., Gibbs,R.A., Weinstock,G.M., Attaway,T., Bell,S.,
            Buhay,C.J., Chandrabose,M.N., Chavez,D., Clerk-Blankenburg,K.P.,
            Cree,A., Dao,M., Davis,C., Chacko,J., Dinh,H., Dugan-Rocha,S.,
            Fowler,G., Garner,T.T., Garnes,J., Gnirke,A., Hawes,A.,
            Hernandez,J., Hines,S., Holder,M., Hume,J., Jhangiani,S.N.,
            Joshi,V., Khan,Z.M., Jackson,L., Kovar,C., Kowis,A., Lee,S.,
            Lewis,L.R., Margolis,J., Morgan,M., Nazareth,L.V., Nguyen,N.,
            Okwuonu,G., Parker,D., Richards,S., Ruiz,S.J., Santibanez,J.,
            Savard,J., Scherer,S.E., Schneider,B., Sodergren,E., Tautz,D.,
            Vattahil,S., Villasana,D., White,C.S., Wright,R., Park,Y.,
            Beeman,R.W., Lord,J., Oppert,B., Lorenzen,M., Brown,S., Wang,L.,
            Savard,J., Tautz,D., Richards,S., Weinstock,G., Gibbs,R.A., Liu,Y.,
            Worley,K., Weinstock,G., Elsik,C.G., Reese,J.T., Elhaik,E.,
            Landan,G., Graur,D., Arensburger,P., Atkinson,P., Beeman,R.W.,
            Beidler,J., Brown,S.J., Demuth,J.P., Drury,D.W., Du,Y.Z.,
            Fujiwara,H., Lorenzen,M., Maselli,V., Osanai,M., Park,Y.,
            Robertson,H.M., Tu,Z., Wang,J.J., Wang,S., Richards,S., Song,H.,
            Zhang,L., Sodergren,E., Werner,D., Stanke,M., Morgenstern,B.,
            Solovyev,V., Kosarev,P., Brown,G., Chen,H.C., Ermolaeva,O.,
            Hlavina,W., Kapustin,Y., Kiryutin,B., Kitts,P., Maglott,D.,
            Pruitt,K., Sapojnikov,V., Souvorov,A., Mackey,A.J.,
            Waterhouse,R.M., Wyder,S., Zdobnov,E.M., Zdobnov,E.M., Wyder,S.,
            Kriventseva,E.V., Kadowaki,T., Bork,P., Aranda,M., Bao,R.,
            Beermann,A., Berns,N., Bolognesi,R., Bonneton,F., Bopp,D.,
            Brown,S.J., Bucher,G., Butts,T., Chaumot,A., Denell,R.E.,
            Ferrier,D.E., Friedrich,M., Gordon,C.M., Jindra,M., Klingler,M.,
            Lan,Q., Lattorff,H.M., Laudet,V., von Levetsow,C., Liu,Z., Lutz,R.,
            Lynch,J.A., da Fonseca,R.N., Posnien,N., Reuter,R., Roth,S.,
            Savard,J., Schinko,J.B., Schmitt,C., Schoppmeier,M., Schroder,R.,
            Shippy,T.D., Simonnet,F., Marques-Souza,H., Tautz,D., Tomoyasu,Y.,
            Trauner,J., Van der Zee,M., Vervoort,M., Wittkopp,N., Wimmer,E.A.,
            Yang,X., Jones,A.K., Sattelle,D.B., Ebert,P.R., Nelson,D.,
            Scott,J.G., Beeman,R.W., Muthukrishnan,S., Kramer,K.J., Arakane,Y.,
            Beeman,R.W., Zhu,Q., Hogenkamp,D., Dixit,R., Oppert,B., Jiang,H.,
            Zou,Z., Marshall,J., Elpidina,E., Vinokurov,K., Oppert,C., Zou,Z.,
            Evans,J., Lu,Z., Zhao,P., Sumathipala,N., Altincicek,B.,
            Vilcinskas,A., Williams,M., Hultmark,D., Hetru,C., Jiang,H.,
            Grimmelikhuijzen,C.J., Hauser,F., Cazzamali,G., Williamson,M.,
            Park,Y., Li,B., Tanaka,Y., Predel,R., Neupert,S., Schachtner,J.,
            Verleyen,P., Raible,F., Bork,P., Friedrich,M., Walden,K.K.,
            Robertson,H.M., Angeli,S., Foret,S., Bucher,G., Schuetz,S.,
            Maleszka,R., Wimmer,E.A., Beeman,R.W., Lorenzen,M., Tomoyasu,Y.,
            Miller,S.C., Grossmann,D. and Bucher,G.
  CONSRTM   Tribolium Genome Sequencing Consortium
  TITLE     The genome of the model beetle and pest Tribolium castaneum
  JOURNAL   Nature 452 (7190), 949-955 (2008)
   PUBMED   18362917
REFERENCE   2  (bases 1 to 67392)
  AUTHORS   Kim,H.S., Murphy,T., Xia,J., Caragea,D., Park,Y., Beeman,R.W.,
            Lorenzen,M.D., Butcher,S., Manak,J.R. and Brown,S.J.
  TITLE     BeetleBase in 2010: revisions to provide comprehensive genomic
            information for Tribolium castaneum
  JOURNAL   Nucleic Acids Res. 38 (DATABASE ISSUE), D437-D442 (2010)
   PUBMED   19820115
REFERENCE   3  (bases 1 to 67392)
  AUTHORS   Shelton,J.M., Herndon,N., Coleman,C., Lu,N. and Brown,S.J.
  TITLE     Tools and pipelines for BioNano data: molecule assembly pipeline
            and FASTA super scaffolding tool
  JOURNAL   Unpublished
REFERENCE   4  (bases 1 to 67392)
  AUTHORS   Liu,Y., Adams,C., Agbai,O. II, Allen,C., Alsbrooks,S., Archer,P.,
            Arredondo,H., Bandaranaike,D., Bangura,L., Beltran,B.,
            Beraducci,A., Biswalo,K., Blyth,P., Buhay,C., Burch,P., Cadoree,I.,
            Canada,A., Cardenas,V., Carter,K., Cavazos,I., Chacko,J.,
            Chahrour,M., Chavez,D., Chen,A., Chen,G., Chen,R., Cheng,M.-T.,
            Chu,J., Clerc,K., Cockrell,R., Coyle,M., Cree,A., Curry,S., Dai,W.,
            Davila,M.L., Davis,C., Davy-Carroll,L., De Anda,C., Delgado,O.,
            Denson,S., Deramo,C., Ding,Y., Dinh,H., Donlin,J., McCauley,S.,
            Dugan-Rocha,S., Dunn,A., Durbin,K., Dziuda,D., Egan,A., Escotto,M.,
            Espinosa,V., Fa,M., Fernandez,S., Fernando,P., Flagg,N., Forbes,L.,
            Fowler,G.J., Fu,Q., Fuh,E., Garcia,A., Garcia,R., Garner,T.,
            Gench,S., Ghose,S., Gill,R., Gonzalez,D., Guevara,W., Holder,M.,
            Haaland,W., Haeberlen,K., Hall,B., Hamid,H., Hamilton,K.,
            Harbes,B., Havlak,P., Hawes,A., Hawkins,E., Hayes,S., Hernandez,J.,
            Hines,S., Hitchens,M., Hogues,M., Hollins,B., Howell,L.T., Hume,J.,
            Imo,K., Jackson,L., Jacob,L., Jiang,H., Johnson,B., Johnson,R.,
            Kelly,S., Keys,T., Khan,Z., King,L., Kovar,C., Kowis,A., Lara,F.,
            Lee,K., Lee,S., LeGall,F.I., Lemon,S., Lewis,L., Li,B., Li,Y.,
            Li,Z., Linnell,M., Liu,W., Liu,Y.-S., Liu,Y., Liyanage,D.,
            London,P., Lopez,J., Lorensuhewa,L., Lozado,R., Madu,R.,
            Maheshwari,M., Mahoney,C., Malloy,K., Mansouri,D., Martinez,E.,
            Mercadao,C., Metzker,M., Minja,E., Morgan,M., Morris,S.,
            Munidasa,M., Nazareth,L., Ngo,D., Nguyen,N., Nott,A.,
            Nwaokelemeh,O., Obregon,M., Ochi-Okorie,C., Odeh,E., Okwuonu,G.,
            Okwuonu,K., Parker,D., Patel,B., Patel,V., Paul,H., Perez,A.,
            Perez,L., Pham,T., Primus,E., Pu,L.-L., Puazo,M., Qin,X., Quinn,A.,
            Quiroz,J., Rabata,D., Rachlin,E., Ren,Y., Rodriguez,F., Rojas,A.,
            Ruiz,S.J., Sana,M., Sanders,W., Santibanez,J., Santos,R.,
            Savery,G., Scherer,S., Shen,H., Shen,Y., Sisson,I., Sodergren,E.,
            Song,X.-Z., Sorelle,R., Svatek,A., Taylor,E., Taylor,T., Thomas,N.,
            Thorn,R., Thornton,R., Trejos,Z., Usmani,K., Vargo,C., Verduzco,D.,
            Villasana,D., Waldron,L., Wang,Q., Wang,S., Warren,J., Wei,X.,
            Wheeler,D., Williams,G., Williams,R., Wright,R., Wu,J., Yakub,S.,
            Yan,K., Yuan,Y., Yu,F., Zhang,J., Zhou,J., Zhang,L., Worley,K.C.,
            Muzny,D., Weinstock,G. and Gibbs,R.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2005) Human Genome Sequencing Center, Baylor
            College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
REFERENCE   5  (bases 1 to 67392)
  AUTHORS   Shelton,J.M., Herndon,N., Coleman,C., Lu,N. and Brown,S.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2014) K-INBRE Bioinformatics Core, Kansas State
            University, Manhattan, KS 66506, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2014
            Assembly Method        :: AllPaths v. 2008; ATLAS-LINK v. 2014;
                                      GapFiller v. 2014; stitch v. 2014
            Assembly Name          :: Tcas5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7.0x
            Sequencing Technology  :: Sanger; Illumina LDJ
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..67392
                     /organism="Tribolium castaneum"
                     /mol_type="genomic DNA"
                     /submitter_seqid="scaffold_seqid55"
                     /strain="Georgia GA2"
                     /db_xref="taxon:7070"
                     /geo_loc_name="USA: Kansas"
                     /collection_date="Apr-2003"
                     /note="linkage_group: LG8"
     gene            complement(3474..7545)
                     /locus_tag="TcasGA2_TC015228"
                     /gene_synonym="GLEAN_15228"
                     /db_xref="BEETLEBASE:TC015228"
     mRNA            complement(join(3474..6670,6723..7202,7473..7545))
                     /locus_tag="TcasGA2_TC015228"
                     /gene_synonym="GLEAN_15228"
                     /product="hypothetical protein"
                     /db_xref="BEETLEBASE:TC015228"
     CDS             complement(join(3474..6670,6723..7202,7473..7545))
                     /locus_tag="TcasGA2_TC015228"
                     /gene_synonym="GLEAN_15228"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EFA09106.1"
                     /db_xref="BEETLEBASE:TC015228"
                     /translation="MFKCSQCDNKFTRKDALTRHVKKHKVTTNAPSCSFHQFCEICNS
                     HYRGSRLNHLRSLKHKSVISAKINDDDDFVEEYQVAFKSRITSYRLKNSQLDDLEVCN
                     FFERNQDKLITLITRKLREFNQLKINFELFAKYILPSKDIIEIKSFNTKNIIISISTN
                     IKVELEEICGVIKNKMSEFLEKDSGWILMEILFLELNINKFNPLRASTYIPLPKDIAK
                     RRAVINIHNDDNECFKWSVLAHLHSTEVNVNRHRVDAYREFEEELDFTDISFPVKLTD
                     IFKFEALNNISVNVYGTEQRFDHEKGKWVSDIIGPFYLTSKKRDIHVNLLLIVDDERM
                     IKHYCLISNISRLISSQLSKHNHAKFICNGCLLFFSSEQKLVKHRKYACNEVVTTLPT
                     SDLIINKFGKEVPGNELTFQNFDKSLKVPFVFYFDFESILKPLRNDNSADNIRTIVTH
                     LHEPYSFGYYIKCAYNDNLSIYRTYRGKDAPKIFVKWLQDDVNRLYHDHLKHIVPLEM
                     TPLDELVFQISTHCHLCKEPFKTDYGSLNCDRVRNHCHLTGEFLGPAHSICNLNYKIP
                     KYIPVFCHNLTNYDSHLFIKALATEKTIINCIAQTKEKYITFSKKILVDKVMNTTTNT
                     VDNIFITLRFVDSFRFLSFSLDKLSQTLTSNECLTIRKHFPDDNQFNLIRQKGVFPYS
                     YLDCFNKLDDTSLPLIQQFYDNLNKTDISEHDYERAQEVWNLFDCKTLGDYSDIYLKS
                     DVLLLTDIFENFRKVCLKIYELDPAHYLTAPSLGWDAMLKMTGIKFELLTDIDMVHFF
                     RKSIRGGLCQCSKRKAVANNKFLSNHDPSKPTSFIMYLDATNLYGAAMSEYLPYSGFR
                     WEDPNEFNDNLILNLTDNADVGYIFEVDLEYPSELHNLHNDLPFCPEKFIPPSSKTEK
                     LCATLNNKVHYVLHYRNLRQAIQGGLKLINIHRVLSFNQSPWLKTYIDLNTEMRNKSK
                     NALEKDVFKLMNNSVFGKTMESIDKRVNVKLVTSWNNIGRKPGAESLIARPNFKNSSI
                     FTPNFVAIQLENEKVFYNKPLYVGFTILDISKTIMYDFYYNFIKLKYGNNATLLYTDT
                     DSLVIEIFCENIYDDIKSNIERFDTSNYKAENIHGIPVSSSVIGKMKDEYKGRVISEF
                     LGTGAKAYCVDVEGELSKKAKGIKHNVITSELHKIDYQNAVTVPNTEIIKEMNIFRSK
                     LHNIYTELKKKIALSFKDDKRYILNNSEGRTLSWGHKNILPQTQE"
     gene            complement(8022..26196)
                     /locus_tag="TcasGA2_TC034086"
                     /old_locus_tag="TcasGA2_TC015225"
                     /old_locus_tag="TcasGA2_TC015227"
                     /gene_synonym="AUGUSTUS-3.0.2_34086"
     mRNA            complement(join(8022..8386,22644..22967,23016..23163,
                     23211..24215,24257..24431,24492..24916,24962..25282,
                     25332..26003,26048..26196))
                     /locus_tag="TcasGA2_TC034086"
                     /old_locus_tag="TcasGA2_TC015225"
                     /old_locus_tag="TcasGA2_TC015227"
                     /gene_synonym="AUGUSTUS-3.0.2_34086"
                     /product="hypothetical protein"
     CDS             complement(join(8301..8386,22644..22967,23016..23163,
                     23211..24215,24257..24431,24492..24916,24962..25282,
                     25332..26003,26048..26182))
                     /locus_tag="TcasGA2_TC034086"
                     /old_locus_tag="TcasGA2_TC015225"
                     /old_locus_tag="TcasGA2_TC015227"
                     /gene_synonym="AUGUSTUS-3.0.2_34086"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KYB25958.1"
                     /translation="MTIAEVTITQGKLRGTTSCDINGDTYFRFQGIPYAKPPVGVLRF
                     KAPQPPENWTGVLDATKEGDPCYGRHFFKKNLIVGSENCLVLNVYTKNLRTDTNRITQ
                     PVLFWIHGGDFVTGSGTSEMYGPDYLMSENVVLVTINYRLGMLGFLSFEDVSLGVPGN
                     AGFKDMVMALKWVQKNIIMFGGDPHNVTIFGSGSGAMSVHLLHLSPISKTLFHKAIAQ
                     SGTVLSLRARGTLAISQIASILKLKDERSVYKHLMALKVAEIYKLQKTLLETCGPFDR
                     NLFGYVVEKKSDEPAFLKEDPFKIIASGNFNQVPLICGYVANETIGSELNQGPTFEEK
                     IIPWFFGYEFGSLESYTVAKEIKSFYYGSEETLPRDKTKTTTLISDAQTVFEIQTTVR
                     KHYVLSRAPTYLYRVSLKTALKIPGLPADVNYIFKNFATSIKPGTKEHKVMKRFVRLW
                     CNFAKYAHPTPRRDDALLNVIWRFVSNDDELDFLDIGDELVASANPDAQRMKFWKKLF
                     NKSPANGKLIQYKRMTFIQSHKPKMEPLVTTVQGQLKGTTSLDSSGEKYYKFQGIPFA
                     KPPVGLLRFKAPEPPEKWTGVLDATKEGSPCYARHPFNNKIVGSEDCLYLNVYTKKIA
                     SNNCSLSPVLFWIHGGAFLNGSGGTEMYGPDFLITQDVVVVTINYRLGILGFLSLENP
                     DLKVPGNAGLKDIVMALKWVQTNIKNFGGDPNNVTVFGQSAGGVAVHLLLLSQMSRGL
                     FHKAIAQSGCAFSPWARGTTGVKELAPVLHVEEDEEKIYERLMKLPVDELFKLQEKIV
                     SFLNIYASKHRAFAYVVEKISDGFLSEEPIDIISNGKFQQLPFMIGYTTAETWGFDSL
                     RPDDWPGAKNLEDSIPWTLGFKTGSPESQVMTEKIKKFYCGGHIPTTIKLETKIAIHT
                     DANFVFGVYKTALSHFSKSQAPTYLYRFSAETELNVMRQFYKIKIPGVVHCDDIGYLF
                     KNVASPRIKPGSKEEVLLKKVVKLWTNFAKFGNPTPDNSLGVVWKPVTDKEVDYLDIG
                     ESLTPARNSIEHKRVQFLTKLYERKNSSSHLVKTNNKQYDTGSQQQQQQQQQQQQQQQ
                     QQPTAFQV"
     gene            10129..12021
                     /locus_tag="TcasGA2_TC015482"
                     /gene_synonym="GLEAN_15482"
                     /db_xref="BEETLEBASE:TC015482"
     mRNA            join(10129..10459,10563..10844,11336..12021)
                     /locus_tag="TcasGA2_TC015482"
                     /gene_synonym="GLEAN_15482"
                     /product="hypothetical protein"
                     /db_xref="BEETLEBASE:TC015482"
     CDS             join(10129..10459,10563..10844,11336..12021)
                     /locus_tag="TcasGA2_TC015482"
                     /gene_synonym="GLEAN_15482"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EFA09107.1"
                     /db_xref="BEETLEBASE:TC015482"
                     /translation="MLSFKGEGLLNTAINKLPFELHLPGYQYCGPGTKLKKRLERGDP
                     GINKLDSFCKTHDIAYANSNDLKDRHQADRILEDSAWSRVKSKDASFGEKASAWFVTN
                     AMKVKRKLENKGYDNIKSALSAARIAVRKSGGRKRIKIPRIIPIKTGRFLPLLPLIFG
                     GLSALGTMGGGAAAITKTVNDAKAAKQKLDENKRHNKVLEDIAIGVESTLSEHYEPPI
                     DLEENSNYSIALIGSYTNNNIPNIEEGTNKFYYLPPSTTEEKVITFPKSAYEIAAIEK
                     YIQIILSGRSATDAQKQNTFSLKANENTLKCEIFSIYDINFAHEDSIGKLLGFSQRKL
                     KARQLHESDLPVNIIKVNTIRIECNIVRGSFYKNKESHTLYETALSVSPAEQIFVELL
                     NPIYLPIINRSNIPNLTIDIVDLDHRPIDFKHKQSIFVLL"
     assembly_gap    12250..22616
                     /estimated_length=10367
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            27703..28934
                     /locus_tag="TcasGA2_TC015483"
                     /gene_synonym="AUGUSTUS-3.0.2_15483"
                     /db_xref="BEETLEBASE:TC015483"
     mRNA            join(27703..27780,28240..28280,28364..28572,28620..28934)
                     /locus_tag="TcasGA2_TC015483"
                     /gene_synonym="AUGUSTUS-3.0.2_15483"
                     /product="hypothetical protein"
                     /db_xref="BEETLEBASE:TC015483"
     CDS             join(28248..28280,28364..28572,28620..28836)
                     /locus_tag="TcasGA2_TC015483"
                     /gene_synonym="AUGUSTUS-3.0.2_15483"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EFA09108.1"
                     /db_xref="BEETLEBASE:TC015483"
                     /translation="MRPTIFLLISVILVVNSGSQYCEPKDEFPDDNSDTADTEWDLFM
                     DKLDQVTLKKNYTKPCKRHPDQQVVINASSPILWELRFDLYNKRQQKEEKTIEQCYSE
                     NQGKTPNTGCNTEGFRECMKSARRAMLEDLNSKWWESKINKKLEEKAEAC"
     gene            complement(29110..30438)
                     /locus_tag="TcasGA2_TC015224"
                     /gene_synonym="AUGUSTUS-3.0.2_15224"
                     /note="serpin peptidase inhibitor 31"
                     /db_xref="BEETLEBASE:TC015224"
     mRNA            complement(join(29110..29272,29316..29466,29513..30292,
                     30336..30438))
                     /locus_tag="TcasGA2_TC015224"
                     /gene_synonym="AUGUSTUS-3.0.2_15224"
                     /product="serpin peptidase inhibitor 31"
                     /db_xref="BEETLEBASE:TC015224"
     CDS             complement(join(29148..29272,29316..29466,29513..30292,
                     30336..30428))
                     /locus_tag="TcasGA2_TC015224"
                     /gene_synonym="AUGUSTUS-3.0.2_15224"
                     /note="accepted without modification"
                     /codon_start=1
                     /product="serpin peptidase inhibitor 31"
                     /protein_id="EFA09277.1"
                     /db_xref="BEETLEBASE:TC015224"
                     /translation="MKLAAVLSLVILTQGEEFSQANYLFTSDVYKECVKNEGGNLLVS
                     PLSVEIVLALAQCGARDETAREIQTALHLASSDQKTAFKSVISGLKGGEHYSLHTANK
                     IYLHDNFSIRDDFKTIATEMFQSEVENIDFSKTEAAGIINKWVEDQTNQKIKNLVRPE
                     SLQNSPSVLVNALYFKARWASKNFLKYPYLTKIFSKTATDQIESEFMIDIGGSYQLHE
                     DKELGARFLKAPFKGQDAHMVFVLPDAVDGLGRLEEQADKIFREHSFQPVIINVELPR
                     FKIESTVNFKSILQKLGVRKAFMNGEADFSGIAGKKGELVVGQVTQKSYIDVNKDGVE
                     AAAATNLVFTLSGPPRTTKEFKANHPFLFYIQAKGVVLFAGRVVDPKY"
     gene            30560..32647
                     /locus_tag="TcasGA2_TC015484"
                     /gene_synonym="AUGUSTUS-3.0.2_15484"
                     /db_xref="BEETLEBASE:TC015484"
     mRNA            join(30560..30811,30858..31109,31155..31285,31330..31452,
                     31504..31707,31755..31984,32201..32378,32445..32647)
                     /locus_tag="TcasGA2_TC015484"
                     /gene_synonym="AUGUSTUS-3.0.2_15484"
                     /product="Ovarian-specific serine/threonine-protein kinase
                     Lok-like Protein"
                     /db_xref="BEETLEBASE:TC015484"
     CDS             join(30688..30811,30858..31109,31155..31285,31330..31452,
                     31504..31707,31755..31984,32201..32378,32445..32555)
                     /locus_tag="TcasGA2_TC015484"
                     /gene_synonym="AUGUSTUS-3.0.2_15484"
                     /codon_start=1
                     /product="Ovarian-specific serine/threonine-protein kinase
                     Lok-like Protein"
                     /protein_id="EFA09109.1"
                     /db_xref="BEETLEBASE:TC015484"
                     /translation="MLEATDLPLTQTQTDEPSQELGEVKRPWGRLCACISTMVSIDLF
                     EPVYTFGRAPSCNIFVDESQFPTILNVSKQHFRLTKDEEGLVFLTDLSKNGTFVNRTK
                     IGRNNECVIYNEDIIAIGSPSTRVYSFISDINRDDYEFLPQELRLKYTTTKLLGRGSF
                     GQVRLALDKQTREQFAIKRIDKSRSSVSTRRGNNISGIKTEVEILSSFSHAFIIQMRE
                     VFETDDEVFLVLEYMSGGELTSRIRSTLAFPECEVKFIFYQILLGVRYLHLNGVTHRD
                     LKPENVLLSTQNQYPRVKISDFGLSKIMDDISVMETVCGTVQYAAPEVLRFFEPYSRK
                     VDVWSLGVILFYMLSRTQPFVGSSREEVAKNIVSGKITWDPKAWRNVSLPAKNLVKSM
                     ITVDSTCRYSIVDIFKHDWVAKDHETRRNVEELVQTFEENNDSGDNLVIPKRRRISFV
                     "
     gene            complement(32694..44968)
                     /locus_tag="TcasGA2_TC015223"
                     /gene_synonym="AUGUSTUS-3.0.2_15223"
                     /db_xref="BEETLEBASE:TC015223"
     mRNA            complement(join(32694..33029,33378..33558,33606..33704,
                     34823..35084,37459..37593,37643..37846,37933..38084,
                     38133..38329,44421..44968))
                     /locus_tag="TcasGA2_TC015223"
                     /gene_synonym="AUGUSTUS-3.0.2_15223"
                     /product="Protein spinster-like Protein"
                     /db_xref="BEETLEBASE:TC015223"
     CDS             complement(join(32977..33029,33378..33558,33606..33704,
                     34823..35084,37459..37593,37643..37846,37933..38084,
                     38133..38329,44421..44769))
                     /locus_tag="TcasGA2_TC015223"
                     /gene_synonym="AUGUSTUS-3.0.2_15223"
                     /codon_start=1
                     /product="Protein spinster-like Protein"
                     /protein_id="EFA09102.2"
                     /db_xref="BEETLEBASE:TC015223"
                     /translation="MIGRRLRSAIPPTWKSNKFRLIFIPVVCVKKLGYLACRTVMPSE
                     KLERVVLKRINKMEGDITQNNSRAELVRSSEESNETSHSERTIKDVKFREWVMVFILC
                     FVNLINYMDRFTLAGILEDIQKYFNVQNDKGGLLQTAFVLSYMIFAPIFGYLGDRYSR
                     KNIMAFGVFLWSLTTLIGSFMTDFWFFLLFRALVGIGEASYSTIAPTIISDLFVGDVR
                     SKMLALFYFAIPVGSGMGYIVGSETAKAFGKWQWGLRVTPLLGVVAVVLIFFVLRDPE
                     RGQSEGSSHIQTTPWTEDLKDLVKNKSFMISTAGFTCVTFVAGALAWWGPKFIEMGLS
                     LQPHASSLDSQSVSYKFGLVSMVSGILGVPAGSLVAQHLRHRYPRIDAHLCGIALLLS
                     TPMVFAACLTASYSLSLCFTFVFFGELFLNLTWSIVADILLYVVLPTRRSTAEGFQLL
                     VSHALGDAGSPYLIGVISEAVLIMLNNSSKSKGNDFKALQYALFTTCFVEILGAFFFL
                     VNALYILQDKHKVDKAIQANSQQLLTDGSETENPS"
     gene            complement(45036..48968)
                     /locus_tag="TcasGA2_TC015222"
                     /gene_synonym="AUGUSTUS-3.0.2_15222"
                     /db_xref="BEETLEBASE:TC015222"
     mRNA            complement(join(45036..46231,46279..46501,46554..46767,
                     48634..48779,48830..48968))
                     /locus_tag="TcasGA2_TC015222"
                     /gene_synonym="AUGUSTUS-3.0.2_15222"
                     /product="hypothetical protein"
                     /note="transcript variant 2"
                     /db_xref="BEETLEBASE:TC015222"
     mRNA            complement(join(45036..46231,46279..46501,46554..46767,
                     48138..48779,48830..48968))
                     /locus_tag="TcasGA2_TC015222"
                     /gene_synonym="AUGUSTUS-3.0.2_15222"
                     /product="hypothetical protein"
                     /note="transcript variant 1"
                     /db_xref="BEETLEBASE:TC015222"
     CDS             complement(join(45763..46231,46279..46501,46554..46767,
                     48634..48771))
                     /locus_tag="TcasGA2_TC015222"
                     /gene_synonym="AUGUSTUS-3.0.2_15222"
                     /note="transcript variant 2"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KYB25959.1"
                     /db_xref="BEETLEBASE:TC015222"
                     /translation="MMRHLGVQRSTSVLENSRRVPLSTIILPPLSPPLPEKASELVGK
                     VLVNKSKSGGVNSELVAVPRSQDVPSHSPERPKGPDSARVAQLEQNIRFLQEQHQLML
                     TGLHNEIESLRIRNRELQFQLVFVKGTLPSSPSSPEDDSKHKVYSSPKQINITPLQVE
                     ILEKELGELKFQLQEIESRNVYLSAIVDEQKKKLERYERDREKERERALQPDPELLRK
                     LDDAEAIIRRLRRENSDLRRENAGVSHFQMRDSTGTYKEPQKGGNQRGMGRHRGNGSG
                     HYRGNWFPPLHSQSFWQQGSRPERNGSAENTALPNLQTSNSTQYQGRRGANNNHYHEG
                     RKYRGQNKSTKPS"
     CDS             complement(join(45763..46231,46279..46501,46554..46767,
                     48138..48185))
                     /locus_tag="TcasGA2_TC015222"
                     /gene_synonym="AUGUSTUS-3.0.2_15222"
                     /note="transcript variant 1"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EFA09101.2"
                     /db_xref="BEETLEBASE:TC015222"
                     /translation="MASKVMVKIPVAPFGQVNKSKSGGVNSELVAVPRSQDVPSHSPE
                     RPKGPDSARVAQLEQNIRFLQEQHQLMLTGLHNEIESLRIRNRELQFQLVFVKGTLPS
                     SPSSPEDDSKHKVYSSPKQINITPLQVEILEKELGELKFQLQEIESRNVYLSAIVDEQ
                     KKKLERYERDREKERERALQPDPELLRKLDDAEAIIRRLRRENSDLRRENAGVSHFQM
                     RDSTGTYKEPQKGGNQRGMGRHRGNGSGHYRGNWFPPLHSQSFWQQGSRPERNGSAEN
                     TALPNLQTSNSTQYQGRRGANNNHYHEGRKYRGQNKSTKPS"
     gene            49060..50754
                     /locus_tag="TcasGA2_TC015485"
                     /gene_synonym="AUGUSTUS-3.0.2_15485"
                     /db_xref="BEETLEBASE:TC015485"
     mRNA            join(49060..49169,49217..49438,49488..49714,49757..49880,
                     49925..50373,50421..50754)
                     /locus_tag="TcasGA2_TC015485"
                     /gene_synonym="AUGUSTUS-3.0.2_15485"
                     /product="hypothetical protein"
                     /db_xref="BEETLEBASE:TC015485"
     CDS             join(49155..49169,49217..49438,49488..49714,49757..49880,
                     49925..50373,50421..50718)
                     /locus_tag="TcasGA2_TC015485"
                     /gene_synonym="AUGUSTUS-3.0.2_15485"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EFA09110.2"
                     /db_xref="BEETLEBASE:TC015485"
                     /translation="MNEIPELKDDLAFLKKFDARGKIWQDIDATNSKGKPKVRSNFLL
                     HPRRFSSESECSSTLQTPRRFLSGTVLKTTLEQNNNVKKEFDCNTKSNMRIDSGPIES
                     DIGESKNSPTLSNPKTATTLRKQVRPASVRVENFDKKFKTLVERSLKLLTNIRLLFEE
                     GISPPDGEEDCMRRFKRLQEFTSRFSRIYLYPLLRHMDELSLPEKLGTAVINQKLLSA
                     QQVILQALQAYHTHLPSSIGKCGSDKLKSLLEQTLYLCQIYDLLKKDTNLETAEFINA
                     MRNHVELLLEALKNFDLKFIEKKSNESIKKKPSKAQCPKPKSKLSMYAANSSFRKDLE
                     LKKALQTLAKKKFSVKSRYKTATFKHRPPVERPRGTEEQGKMKLFSRHSGNLKSTPVR
                     SPIREDDIKTMVEVDSEFEAPPNTGEVGQKIKFDFAHFLWGNKLNSFKFITI"
     gene            complement(51501..53948)
                     /locus_tag="TcasGA2_TC015221"
                     /gene_synonym="AUGUSTUS-3.0.2_15221"
                     /db_xref="BEETLEBASE:TC015221"
     mRNA            complement(join(51501..51699,51752..51982,52028..52204,
                     52266..52313,53730..53948))
                     /locus_tag="TcasGA2_TC015221"
                     /gene_synonym="AUGUSTUS-3.0.2_15221"
                     /product="PDZ and LIM domain protein Zasp-like Protein"
                     /db_xref="BEETLEBASE:TC015221"
     CDS             complement(join(51625..51699,51752..51982,52028..52204,
                     52266..52313,53730..53732))
                     /locus_tag="TcasGA2_TC015221"
                     /gene_synonym="AUGUSTUS-3.0.2_15221"
                     /codon_start=1
                     /product="PDZ and LIM domain protein Zasp-like Protein"
                     /protein_id="EFA09100.2"
                     /db_xref="BEETLEBASE:TC015221"
                     /translation="MAPPKVCASCKQNIEGGPAIIALDKVYHPEHFTCHECKAPITGS
                     KFQEKDNEPYCDKCYADKFLTRCKACGDPITDKVVTAMGADWHEDHFVCGGCKAKLIG
                     TKFMEIENAPYCQKCYTEKYADKCKACGKPIVTQAVVALDAKWHQLCFKCSKCGKPIM
                     KDQSFRTEGGKPQCVKC"
     gene            52449..55040
                     /locus_tag="TcasGA2_TC015486"
                     /gene_synonym="GLEAN_15486"
                     /db_xref="BEETLEBASE:TC015486"
     mRNA            join(52449..52723,54557..54895,54938..55040)
                     /locus_tag="TcasGA2_TC015486"
                     /gene_synonym="GLEAN_15486"
                     /product="hypothetical protein"
                     /db_xref="BEETLEBASE:TC015486"
     CDS             join(52449..52723,54557..54895,54938..55040)
                     /locus_tag="TcasGA2_TC015486"
                     /gene_synonym="GLEAN_15486"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EFA09111.1"
                     /db_xref="BEETLEBASE:TC015486"
                     /translation="MDNKISRLWKRIQTHLLLSIVFYFQNLNHENSIASSRQLVQDSD
                     RDGTEVEKALQVLKKFLGNSEEAQKEFLKKIATQVEKEKSDKAKKKLEPVVTVTGAKN
                     AKLICIRDDNSVVEDDCKRDKEIMTDAEIRVTSSETQTELKKVQSKSVVKISRLPKAN
                     RMLQLLPKESAINIIQYKLQYGQFRKHDPMYRKSAHIQPWVLMGRISDDLLDFILKSV
                     TGELEVNEILENLYNAEFQY"
     gene            complement(55081..58898)
                     /locus_tag="TcasGA2_TC015220"
                     /gene_synonym="AUGUSTUS-3.0.2_15220"
                     /db_xref="BEETLEBASE:TC015220"
     mRNA            complement(join(55081..55289,55338..55536,55582..55802,
                     56059..56262,57635..57803,58007..58087,58563..58627,
                     58680..58898))
                     /locus_tag="TcasGA2_TC015220"
                     /gene_synonym="AUGUSTUS-3.0.2_15220"
                     /product="hypothetical protein"
                     /db_xref="BEETLEBASE:TC015220"
     CDS             complement(join(55189..55289,55338..55536,55582..55802,
                     56059..56262,57635..57803,58007..58087,58563..58627,
                     58680..58719))
                     /locus_tag="TcasGA2_TC015220"
                     /gene_synonym="AUGUSTUS-3.0.2_15220"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="EFA09099.1"
                     /db_xref="BEETLEBASE:TC015220"
                     /translation="MAYNTRRSGGGGEPINTVGARRNPPLTNNFIPGGQLAPQNRPPQ
                     PRMQPPPNQNNANFRPQQRMPVPPQGQKQMPPNDPPQKMPQQIPGLDIPLKVEGAMQS
                     DAANETGKQKPLWLKTAANKITRKERQRRRNIRLSRMIQPKNAVMILNELVKSATYTV
                     TDVPQPPEMNQYTATVLVDGVTHIGHGRSKMEAKSMAAENALKYIVKNRQFSALSKDV
                     EGDDKMEMGEDGTPTLPWQHVASFALYKLLNAWGEDPNQTRGDAGPGQIPQNRPSRKM
                     PENAAHMNPLMLLNQMMPHAQFEELGRTGNPPNVIFTFKCTVGGQSFNGTGPNKKSAK
                     KMAAFAVCHKMLGIQYPQEVYTPSN"
     gene            complement(59875..61204)
                     /locus_tag="TcasGA2_TC034829"
                     /gene_synonym="AUGUSTUS-3.0.2_34829"
     mRNA            complement(join(59875..60172,60222..60552,60599..60762,
                     60810..61204))
                     /locus_tag="TcasGA2_TC034829"
                     /gene_synonym="AUGUSTUS-3.0.2_34829"
                     /product="Cytochrome P450 9c1-like protein"
     CDS             complement(join(60166..60172,60222..60552,60599..60762,
                     60810..61012))
                     /locus_tag="TcasGA2_TC034829"
                     /gene_synonym="AUGUSTUS-3.0.2_34829"
                     /codon_start=1
                     /product="Cytochrome P450 9c1-like protein"
                     /protein_id="KYB25960.1"
                     /translation="MWWLLIAAFTLLYALYIRLKKKNEYWIKKGVKQGSPVLIFGDKW
                     RAIAHNESLADMVQKIYNVGPGDRYCGAYDFMSPALVLKDPELIKDILVKDFDHFVDH
                     KRVIPEGSDPIWDKNLFFLTGQKWRDMRSTLSPVFTGSKMRFMFNLIAKSADQFVQHF
                     VKQEETLIQIEMKDACARLTNDIIASTVFGFESDSVEDPDSKFYEMARKITDFSGLWQ
                     GLKILGFFIFPKCIKL"
     gene            complement(61568..65118)
                     /locus_tag="TcasGA2_TC015218"
                     /gene_synonym="AUGUSTUS-3.0.2_15218"
                     /note="cytochrome P450 9Z6"
                     /db_xref="BEETLEBASE:TC015218"
     mRNA            complement(join(61568..62089,62141..62594,62646..63141,
                     63196..63582,64997..65118))
                     /locus_tag="TcasGA2_TC015218"
                     /gene_synonym="AUGUSTUS-3.0.2_15218"
                     /product="cytochrome P450 9Z6"
                     /db_xref="BEETLEBASE:TC015218"
     CDS             complement(join(61656..62089,62141..62594,62646..63141,
                     63196..63392))
                     /locus_tag="TcasGA2_TC015218"
                     /gene_synonym="AUGUSTUS-3.0.2_15218"
                     /codon_start=1
                     /product="cytochrome P450 9Z6"
                     /protein_id="EFA09275.1"
                     /db_xref="BEETLEBASE:TC015218"
                     /translation="MFWILVGLALVALYWALSRPHSYWKRKGVVQGSPVFLLGDSWPM
                     LFRKYSPPEMTELFYKASPNTRYFGIYEFLTPGLLLRDPDLIKQITVKDFDHFVDRRP
                     FVPEKADPLFGKSLFSLKGPKWRAMRSTLSPVFTSSKMKYMFQLMSQTGERFINHFLN
                     QKEEVVTVEMKEITTKFANDVIGNIVFGYECDSVKDPKNEFYVMGADLTNFRSLRFLL
                     VFSANMIVPKLLALFKIPLFPKKVSDFFVRVVNDNIESREKHGIVRPDMIHLLLKMKS
                     NNLKHEEVETVPDAGFASVEESELGKNAKTVTKITNEDIAAQALLFFFAGFDSVSSLI
                     SYMAYELAVNPDVQTKLLQEVDETRQKSDGKITYEALMSMKYMDMVVSEALRKWPNAI
                     ATERVCTKPYTIEPKLPDEKPLRLEIGDVVAIPMYAIQRDPKYFPEPERFIPERFSDE
                     NKSKVQPYTFMSFGTGPRSCIGSRFALLETKLLFYYFLTNFEFVPVEKTQIPIKFNRK
                     ALNMSPENGFWLGLKRRV"
     gene            65146..67037
                     /locus_tag="TcasGA2_TC034830"
                     /gene_synonym="AUGUSTUS-3.0.2_34830"
     mRNA            join(65146..65158,65236..65448,65496..65991,66045..66495,
                     66545..67037)
                     /locus_tag="TcasGA2_TC034830"
                     /gene_synonym="AUGUSTUS-3.0.2_34830"
                     /product="Cytochrome P450 9b2-like protein"
     CDS             join(65249..65448,65496..65991,66045..66495,66545..66984)
                     /locus_tag="TcasGA2_TC034830"
                     /gene_synonym="AUGUSTUS-3.0.2_34830"
                     /codon_start=1
                     /product="Cytochrome P450 9b2-like protein"
                     /protein_id="KYB25961.1"
                     /translation="MLLVLLAIATLIYFYWKIIYPHKYWTRKGVPQSKPVFLFGDIWP
                     MIIRKYSAPELVDEFYKIDQNARYCGVYQFLSPGLILRDPELIKEITVKDFDHFVDRR
                     VFVKENVDPVFGRSLLSLDGEKWRNMRAAVSPVFTSSKMKYMFPSISQCGEDFANYFL
                     KQNKDLLELEMKESITKFTNDVIANTVFGFTCNSLENPNNEFYKMGDEVGNMTSMRTR
                     IVFLMNALAPKILSFFKIYLFSPRIYTFFRQVVNENISSREKHGVTRPDMIDLLVKAK
                     NNSLKNEEADDLPEAGFTTVKDTENGKKSRKYQITDEDIVAQALLFFFAGFDSVAGVI
                     SYMCYELAVAQDAQEKLRQEVDETREKCGGKISYEELMKMKYMHMAVSETLRKWPTAI
                     ASDRVCVKPYTIQPKLPNEKPLHLKVGDTVNIPIYAIQRDPQYFPEPDRFIPERFSEE
                     NKSKIVPYTYMSFGTGPRSCIGYRFALLEMKILMYHLISNFEIVPVAKTQIPIRFNPK
                     AVNMTAEKGFWVGLKRRVKV"
CONTIG      join(AAJJ02003066.1:1..12249,gap(10367),AAJJ02003067.1:1..44776)
//