LOCUS KQ971358 721247 bp DNA linear CON 10-MAR-2016 DEFINITION Tribolium castaneum strain Georgia GA2 linkage group LG8 genomic scaffold scaffold_seqid53, whole genome shotgun sequence. ACCESSION KQ971358 AAJJ02000000 VERSION KQ971358.1 DBLINK BioProject: PRJNA12540 BioSample: SAMN02953634 KEYWORDS WGS. SOURCE Tribolium castaneum (red flour beetle) ORGANISM Tribolium castaneum Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium. REFERENCE 1 (bases 1 to 721247) AUTHORS Richards,S., Gibbs,R.A., Weinstock,G.M., Brown,S.J., Denell,R., Beeman,R.W., Gibbs,R., Beeman,R.W., Brown,S.J., Bucher,G., Friedrich,M., Grimmelikhuijzen,C.J., Klingler,M., Lorenzen,M., Richards,S., Roth,S., Schroder,R., Tautz,D., Zdobnov,E.M., Muzny,D., Gibbs,R.A., Weinstock,G.M., Attaway,T., Bell,S., Buhay,C.J., Chandrabose,M.N., Chavez,D., Clerk-Blankenburg,K.P., Cree,A., Dao,M., Davis,C., Chacko,J., Dinh,H., Dugan-Rocha,S., Fowler,G., Garner,T.T., Garnes,J., Gnirke,A., Hawes,A., Hernandez,J., Hines,S., Holder,M., Hume,J., Jhangiani,S.N., Joshi,V., Khan,Z.M., Jackson,L., Kovar,C., Kowis,A., Lee,S., Lewis,L.R., Margolis,J., Morgan,M., Nazareth,L.V., Nguyen,N., Okwuonu,G., Parker,D., Richards,S., Ruiz,S.J., Santibanez,J., Savard,J., Scherer,S.E., Schneider,B., Sodergren,E., Tautz,D., Vattahil,S., Villasana,D., White,C.S., Wright,R., Park,Y., Beeman,R.W., Lord,J., Oppert,B., Lorenzen,M., Brown,S., Wang,L., Savard,J., Tautz,D., Richards,S., Weinstock,G., Gibbs,R.A., Liu,Y., Worley,K., Weinstock,G., Elsik,C.G., Reese,J.T., Elhaik,E., Landan,G., Graur,D., Arensburger,P., Atkinson,P., Beeman,R.W., Beidler,J., Brown,S.J., Demuth,J.P., Drury,D.W., Du,Y.Z., Fujiwara,H., Lorenzen,M., Maselli,V., Osanai,M., Park,Y., Robertson,H.M., Tu,Z., Wang,J.J., Wang,S., Richards,S., Song,H., Zhang,L., Sodergren,E., Werner,D., Stanke,M., Morgenstern,B., Solovyev,V., Kosarev,P., Brown,G., Chen,H.C., Ermolaeva,O., Hlavina,W., Kapustin,Y., Kiryutin,B., Kitts,P., Maglott,D., Pruitt,K., Sapojnikov,V., Souvorov,A., Mackey,A.J., Waterhouse,R.M., Wyder,S., Zdobnov,E.M., Zdobnov,E.M., Wyder,S., Kriventseva,E.V., Kadowaki,T., Bork,P., Aranda,M., Bao,R., Beermann,A., Berns,N., Bolognesi,R., Bonneton,F., Bopp,D., Brown,S.J., Bucher,G., Butts,T., Chaumot,A., Denell,R.E., Ferrier,D.E., Friedrich,M., Gordon,C.M., Jindra,M., Klingler,M., Lan,Q., Lattorff,H.M., Laudet,V., von Levetsow,C., Liu,Z., Lutz,R., Lynch,J.A., da Fonseca,R.N., Posnien,N., Reuter,R., Roth,S., Savard,J., Schinko,J.B., Schmitt,C., Schoppmeier,M., Schroder,R., Shippy,T.D., Simonnet,F., Marques-Souza,H., Tautz,D., Tomoyasu,Y., Trauner,J., Van der Zee,M., Vervoort,M., Wittkopp,N., Wimmer,E.A., Yang,X., Jones,A.K., Sattelle,D.B., Ebert,P.R., Nelson,D., Scott,J.G., Beeman,R.W., Muthukrishnan,S., Kramer,K.J., Arakane,Y., Beeman,R.W., Zhu,Q., Hogenkamp,D., Dixit,R., Oppert,B., Jiang,H., Zou,Z., Marshall,J., Elpidina,E., Vinokurov,K., Oppert,C., Zou,Z., Evans,J., Lu,Z., Zhao,P., Sumathipala,N., Altincicek,B., Vilcinskas,A., Williams,M., Hultmark,D., Hetru,C., Jiang,H., Grimmelikhuijzen,C.J., Hauser,F., Cazzamali,G., Williamson,M., Park,Y., Li,B., Tanaka,Y., Predel,R., Neupert,S., Schachtner,J., Verleyen,P., Raible,F., Bork,P., Friedrich,M., Walden,K.K., Robertson,H.M., Angeli,S., Foret,S., Bucher,G., Schuetz,S., Maleszka,R., Wimmer,E.A., Beeman,R.W., Lorenzen,M., Tomoyasu,Y., Miller,S.C., Grossmann,D. and Bucher,G. CONSRTM Tribolium Genome Sequencing Consortium TITLE The genome of the model beetle and pest Tribolium castaneum JOURNAL Nature 452 (7190), 949-955 (2008) PUBMED 18362917 REFERENCE 2 (bases 1 to 721247) AUTHORS Kim,H.S., Murphy,T., Xia,J., Caragea,D., Park,Y., Beeman,R.W., Lorenzen,M.D., Butcher,S., Manak,J.R. and Brown,S.J. TITLE BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum JOURNAL Nucleic Acids Res. 38 (DATABASE ISSUE), D437-D442 (2010) PUBMED 19820115 REFERENCE 3 (bases 1 to 721247) AUTHORS Shelton,J.M., Herndon,N., Coleman,C., Lu,N. and Brown,S.J. TITLE Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool JOURNAL Unpublished REFERENCE 4 (bases 1 to 721247) AUTHORS Liu,Y., Adams,C., Agbai,O. II, Allen,C., Alsbrooks,S., Archer,P., Arredondo,H., Bandaranaike,D., Bangura,L., Beltran,B., Beraducci,A., Biswalo,K., Blyth,P., Buhay,C., Burch,P., Cadoree,I., Canada,A., Cardenas,V., Carter,K., Cavazos,I., Chacko,J., Chahrour,M., Chavez,D., Chen,A., Chen,G., Chen,R., Cheng,M.-T., Chu,J., Clerc,K., Cockrell,R., Coyle,M., Cree,A., Curry,S., Dai,W., Davila,M.L., Davis,C., Davy-Carroll,L., De Anda,C., Delgado,O., Denson,S., Deramo,C., Ding,Y., Dinh,H., Donlin,J., McCauley,S., Dugan-Rocha,S., Dunn,A., Durbin,K., Dziuda,D., Egan,A., Escotto,M., Espinosa,V., Fa,M., Fernandez,S., Fernando,P., Flagg,N., Forbes,L., Fowler,G.J., Fu,Q., Fuh,E., Garcia,A., Garcia,R., Garner,T., Gench,S., Ghose,S., Gill,R., Gonzalez,D., Guevara,W., Holder,M., Haaland,W., Haeberlen,K., Hall,B., Hamid,H., Hamilton,K., Harbes,B., Havlak,P., Hawes,A., Hawkins,E., Hayes,S., Hernandez,J., Hines,S., Hitchens,M., Hogues,M., Hollins,B., Howell,L.T., Hume,J., Imo,K., Jackson,L., Jacob,L., Jiang,H., Johnson,B., Johnson,R., Kelly,S., Keys,T., Khan,Z., King,L., Kovar,C., Kowis,A., Lara,F., Lee,K., Lee,S., LeGall,F.I., Lemon,S., Lewis,L., Li,B., Li,Y., Li,Z., Linnell,M., Liu,W., Liu,Y.-S., Liu,Y., Liyanage,D., London,P., Lopez,J., Lorensuhewa,L., Lozado,R., Madu,R., Maheshwari,M., Mahoney,C., Malloy,K., Mansouri,D., Martinez,E., Mercadao,C., Metzker,M., Minja,E., Morgan,M., Morris,S., Munidasa,M., Nazareth,L., Ngo,D., Nguyen,N., Nott,A., Nwaokelemeh,O., Obregon,M., Ochi-Okorie,C., Odeh,E., Okwuonu,G., Okwuonu,K., Parker,D., Patel,B., Patel,V., Paul,H., Perez,A., Perez,L., Pham,T., Primus,E., Pu,L.-L., Puazo,M., Qin,X., Quinn,A., Quiroz,J., Rabata,D., Rachlin,E., Ren,Y., Rodriguez,F., Rojas,A., Ruiz,S.J., Sana,M., Sanders,W., Santibanez,J., Santos,R., Savery,G., Scherer,S., Shen,H., Shen,Y., Sisson,I., Sodergren,E., Song,X.-Z., Sorelle,R., Svatek,A., Taylor,E., Taylor,T., Thomas,N., Thorn,R., Thornton,R., Trejos,Z., Usmani,K., Vargo,C., Verduzco,D., Villasana,D., Waldron,L., Wang,Q., Wang,S., Warren,J., Wei,X., Wheeler,D., Williams,G., Williams,R., Wright,R., Wu,J., Yakub,S., Yan,K., Yuan,Y., Yu,F., Zhang,J., Zhou,J., Zhang,L., Worley,K.C., Muzny,D., Weinstock,G. and Gibbs,R.A. TITLE Direct Submission JOURNAL Submitted (09-AUG-2005) Human Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA REFERENCE 5 (bases 1 to 721247) AUTHORS Shelton,J.M., Herndon,N., Coleman,C., Lu,N. and Brown,S.J. TITLE Direct Submission JOURNAL Submitted (12-NOV-2014) K-INBRE Bioinformatics Core, Kansas State University, Manhattan, KS 66506, USA COMMENT ##Genome-Assembly-Data-START## Assembly Date :: SEP-2014 Assembly Method :: AllPaths v. 2008; ATLAS-LINK v. 2014; GapFiller v. 2014; stitch v. 2014 Assembly Name :: Tcas5.2 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 7.0x Sequencing Technology :: Sanger; Illumina LDJ ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..721247 /organism="Tribolium castaneum" /mol_type="genomic DNA" /submitter_seqid="scaffold_seqid53" /strain="Georgia GA2" /db_xref="taxon:7070" /geo_loc_name="USA: Kansas" /collection_date="Apr-2003" /note="linkage_group: LG8" gene complement(2152..17339) /locus_tag="TcasGA2_TC005895" /gene_synonym="AUGUSTUS-3.0.2_05895" /db_xref="BEETLEBASE:TC005895" mRNA complement(join(2152..2708,5461..6647,10635..12109, 14357..14463,17178..17339)) /locus_tag="TcasGA2_TC005895" /gene_synonym="AUGUSTUS-3.0.2_05895" /product="Myosin-IA-like Protein" /db_xref="BEETLEBASE:TC005895" CDS complement(join(2510..2708,5461..6647,10635..12109, 14357..14463,17178..17266)) /locus_tag="TcasGA2_TC005895" /gene_synonym="AUGUSTUS-3.0.2_05895" /codon_start=1 /product="Myosin-IA-like Protein" /protein_id="EFA08265.1" /db_xref="BEETLEBASE:TC005895" /translation="MAMQREVGVGDFVLLDKIDLGNFMKNLELRFKHGKIYTYIGEVC VSVNPYKTMNIYDQKFIDQYKGRELFENPPHIFAIADASHKVMQQQGKDTCIVISGES GAGKTEASKIIMKYIAAVTNKDGQKEIERVKNVLLQSNSILEAFGNAKTNRNDNSSRF GKYMDIHFDFKGDPIGGHINKYLLEKSRVIYQQAGERNFHSFYQVLAGAGDDLLRKLH LSRNSDDYFYVKQGKAAKVDTINDRNDFRDVNSSLNTLQFSKEAQETLWRVVAAILHL GNLEFVTDGDNKLQIKNKKSLEIISELLQVQKNELNSALCERVIAARGDIMRKEHTEA EALYGRDALAKAIYERLFGWIVEKINSAIAIDEKNYSKNYKSSLIGVLDIYGFEIFDN NSFEQFCINYCNEKLQQLFIELVLKQEQEEYNREGIEWQNIDFFNNQIICELVEAPHK GILAIMDDASKMTAEKVTDELLLETMDKQLKNHKHYTSRQLKPADKNMRHKIDFRITH YAGDVTYCVTGFLDKNKDTLFQDFKRLMFNSNDSNLKEMFPEGSQHISQTTKRPPTAG SLFKTSMQALVQNLYSKEPHYVRCIKPNELKSPSAFDEERVKHQVSYLGLVENVRVRR AGFAYRQRYDLFLKRYKMISQFTWPNFRSGTDKDGVCVIMDERKFSDDVKYGKTKIFI RSPKTLFALEAARNDLIPGIVTLIQKTWRGYVARQQYKKMRALMTMIQAYRLKKMRVY VNALQAKFANAKRMKDFGKSVMWPAPPVSLQKTTRTLKQIYNRWRAFMILNKIPRAEW PEMKIKVAAASALLNKRPTYGLNRRWEGNYLATHSENNNYTTFNDAVNNLKNGQHFGK VLFSSFVTKFNKFNKCAERVILVTDLAIFKLDSLKFRNMKEGTAVKDLTGISVSPGQD QLIVLHCLGGNDLVVSLHSMKQEDRIGELVGIVSNTYFKFKGTDLPVTVSKTITCSLG GKKRVITINVTSEVQTPTFKKDGNNIAYLLPTSFAVVENGRDFIKH" assembly_gap 6697..6913 /estimated_length=217 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 17431..18260 /locus_tag="TcasGA2_TC006258" /gene_synonym="AUGUSTUS-3.0.2_06258" /db_xref="BEETLEBASE:TC006258" mRNA join(17431..17675,17722..17956,18009..18260) /locus_tag="TcasGA2_TC006258" /gene_synonym="AUGUSTUS-3.0.2_06258" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006258" CDS join(17510..17675,17722..17956,18009..18117) /locus_tag="TcasGA2_TC006258" /gene_synonym="AUGUSTUS-3.0.2_06258" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08599.2" /db_xref="BEETLEBASE:TC006258" /translation="MLRQRLSEKFYETTPRQSYRPNLRAEKPVLSEWKLSLVGLVLSL GVILAKIYFAHHDEVKKFFVERRLFTFETVNEDGNVMYHHVWRNVVKFSGVWLPAVCG VLTTYFTWLMVYLDSDVPGVQPPSPLSPNKYKARSGHSLHLNYVFALIMGISVAFYMY WRNINIEFS" gene 19741..24319 /locus_tag="TcasGA2_TC006259" /gene_synonym="AUGUSTUS-3.0.2_06259" /db_xref="BEETLEBASE:TC006259" mRNA join(19741..19887,19937..20776,23223..24319) /locus_tag="TcasGA2_TC006259" /gene_synonym="AUGUSTUS-3.0.2_06259" /product="Protein vms-1-like Protein" /db_xref="BEETLEBASE:TC006259" CDS join(19800..19887,19937..20776,23223..24133) /locus_tag="TcasGA2_TC006259" /gene_synonym="AUGUSTUS-3.0.2_06259" /codon_start=1 /product="Protein vms-1-like Protein" /protein_id="EFA08600.1" /db_xref="BEETLEBASE:TC006259" /translation="MEFMKIFDEKFHEIVKSGIRSILLENEPEDVENSILKDWLPEKP NSLACSYCRVEFDQVCQQREHYKLDWHRYNLRQSLLQKPPITEEEFDEKTTHDDISSI SGSDSEKDDNLDSFATAQGKIFLQNEQGTVFSIYACLLYRKKEELQNQVLKTRLKECC VSNRKWAVLMLGGGHFAGAVFDNDQVVVHKTFHCYTVRAGQGGAQSSRDAKSGGSGPK SAGASLRRYNEQALVQHVRGIVDTWKSQLDECALILYRASGPYNRGVLFGGGDPVFDK NDARLRTIPFSTRRATFTEVKRVHSEMTTAQVYHSYDSAIQYFTRRKNTKRVKTRSPC IDRAKSREIIERPLPVTHETSSDEEVLNLSTENNEISFVDSLQEFEDTLTPEQRRKRK PKKSKTKQNEQRKHELIQTLQKGDIETLARVVNDFNEIVDDDGNTLLHIAAMNEQNAT LSFLLEKGANPCAKNHKQQTPYTCTQSKEIRESLKQFARDFPDKYNYNKAQIPTNVLT PEELAEKKKAQRKLKKEKEKIKKKENEIKRREEMEKERFLKLSDREKRALAAERRILS QSGTVITRCFLCACDMTGKVPFEYLGNRFCSVECLKAHRLQNPQIL" gene complement(24322..37257) /locus_tag="TcasGA2_TC005894" /gene_synonym="AUGUSTUS-3.0.2_05894" /db_xref="BEETLEBASE:TC005894" mRNA complement(join(24322..24901,26850..27177,27234..27407, 27458..27577,30277..31566,31615..31754,36631..36765, 37029..37257)) /locus_tag="TcasGA2_TC005894" /gene_synonym="AUGUSTUS-3.0.2_05894" /product="hypothetical protein" /db_xref="BEETLEBASE:TC005894" CDS complement(join(24390..24901,26850..27177,27234..27407, 27458..27577,30277..31566,31615..31754,36631..36765, 37029..37047)) /locus_tag="TcasGA2_TC005894" /gene_synonym="AUGUSTUS-3.0.2_05894" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08264.1" /db_xref="BEETLEBASE:TC005894" /translation="MEQFSKGKPVTTSVPTISIKFHANAEQLEELYASDDEHNANDAA TAQTGAAGVSEPESSPLKLLPRLVKRSTSIDITPNPNIDASPPSDPWRFFSDIKGKIT KSVEEKITEIKARNQDEGSPLKTKVKDSKENSSLSDSEDLSESSISKTCGIFSTTEGA EMSSDDDDTPSIEKDRNVGLRQRFRLLKSKSSKEGTISKKSLASIYSINSDKIEQALP EENDIESAVDALEEIGANFKILKEIEQDFDNIKIDDENVVNIKEVSGEEIREIQSKPQ TVYAPVGFVDLRARNETIKKGVSRGFFHIFAIVLAYVLIHSYSSYLAGFLIGVFVTCV FYYVKFLLDTPSHSPAIAIQTCKDILQVPAVKEFQPLTKYEGWVNEFPDNYNPHTYHI SQTQSVFLRLQGNLLRLSHTKSKVAKRALWNEPKIKPIFTHHRVYNLTGAQVSLLPVG LAKKRHWSKKYPICVTLNKDQMDFIESPIEKKRSQGNKKKFSILAQRFSKLTEENEDF ECDSENSRASSPSPPSPDDSDDKLLNEALDDALKDEENEVLLDEEFESIPDDWSGLTP PDESPTQTKLFLFGRTDREKEDWFRRLKAATHKGANLPSSDTCEILTESDYIKYMMIF NKIKVESDVQWINSLVGRVFFDCLRDDNFTQGIKDKIQSKLSSIKLPYFIEGLMVTEL NLGKTPPLIHKVTKPSIDERGLWIDLDVTYEGLVVLILQTKLNLMKLKQPHSNETVKE RSAMFNSDLEDSPESTSDEETPIFPNPPALDSGQSGSNTSKKFIKMVDRIAESKFFQA ATEYRYIKKAMEGVSNTDLRLKVEIKELVGTLVLNIPPPPSDRVWIGFRPTPELALGA QPIVGERNITFLRITSWIEKKLRLEFQKLLVIPNMEDFIVPVMSPKLPE" assembly_gap 25662..25735 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 34585..36118 /estimated_length=1534 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 37359..41267 /locus_tag="TcasGA2_TC006260" /gene_synonym="AUGUSTUS-3.0.2_06260" /db_xref="BEETLEBASE:TC006260" mRNA join(37359..37504,37639..38691,40808..41267) /locus_tag="TcasGA2_TC006260" /gene_synonym="AUGUSTUS-3.0.2_06260" /product="COP9 signalosome complex subunit 4-like Protein" /db_xref="BEETLEBASE:TC006260" CDS join(37655..38691,40808..41126) /locus_tag="TcasGA2_TC006260" /gene_synonym="AUGUSTUS-3.0.2_06260" /codon_start=1 /product="COP9 signalosome complex subunit 4-like Protein" /protein_id="EFA08601.1" /db_xref="BEETLEBASE:TC006260" /translation="MDSIATDSGKIVKMEVDYSSTCDEKIPECQKLAQAGKLHDALDQ LLALEKQTRTGADMVSTGRVLVAIVQICKEARNWGALNEHIVLLTKRRSQLKQAVAKM VQECCTYVDQTPDKDTMIKLIDTLRQVTEGKIYVEVERARLTHKLAKIREEEGNISEA ANIIQELQVETYGSMDKREKVELILEQMRLCLAKQDYIRTQIISKKINTKFFDDEGTQ DLKLKYYRLMMELDQHEGSYLATCKHYRAVLNTPNIQSEPLERQKAARAVVLYLILAP HDNEQADLTHRVLADKVLEEIPMYKQLLKLFTTSELIKWSGLCEIYEKELLSTPVFSG NEQAKKRWNDLKNRVVEHNIRVMAKYYTRIKISRMADLLDLSPAETEEFLSQMVVSKS VQAKTDRPSGVVHFQQSKDPSDVLNDWAHDLASLMQLVNKTTHLINKEECVHKHLQAT A" gene 41389..47069 /locus_tag="TcasGA2_TC006261" /gene_synonym="AUGUSTUS-3.0.2_06261" /db_xref="BEETLEBASE:TC006261" mRNA join(41389..41473,41523..42137,42187..42775,45699..46223, 46600..46683,46743..46899,46949..47069) /locus_tag="TcasGA2_TC006261" /gene_synonym="AUGUSTUS-3.0.2_06261" /product="Proton-coupled folate transporter-like Protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC006261" mRNA join(41389..41473,41523..41560,42187..42775,45699..46223, 46600..46683,46743..46899,46949..47069) /locus_tag="TcasGA2_TC006261" /gene_synonym="AUGUSTUS-3.0.2_06261" /product="Proton-coupled folate transporter-like Protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC006261" CDS join(41531..41560,42187..42775,45699..46223,46600..46683, 46743..46899,46949..47030) /locus_tag="TcasGA2_TC006261" /gene_synonym="AUGUSTUS-3.0.2_06261" /note="transcript variant 1" /codon_start=1 /product="Proton-coupled folate transporter-like Protein" /protein_id="EFA08602.2" /db_xref="BEETLEBASE:TC006261" /translation="MTSTENITTTMPSPSWQPPERRSLLYYLKLITVEPTMVLYMMAF MTTSVVEQAFFVNKACRVNHGLNASICDNLTEYEELNKEVQVTVSDFHLYNDVAGHVV PIILALFMGAWSDKRGRKLPLLIGLTGKLYYSVMVVVNATQDTWPVEYIVYTATLPMA FTGADVAIFAAAFTYLVDISTQESRTMRVTLLEVCYLATMPTGIALGKVLFNQVVNKS YAVMFGINVALLFLAIVYSFLRLDWRTNSRQQPLSEAPNLFTDFFDYNHVVDTGKTLF KSRRNNQRCYLLILIAMMAFYTFQRDEKAMSYLYVQLIFKWTFDEFSNFRTVQSAIQD VFLLCAIPLMSRVLGWRDTIIIMIGALAHSVGRIFFATADESWMFYLGGVFAAIGPIV APVIRSMVSKLVANSEKGKTLAVLAVADNAIPLISGTMYSKVYNATIHTHPNAIFYLT MATQMTVFVLILFIHVKAKDEYLIHEDEEVKTECLRDD" CDS join(42135..42137,42187..42775,45699..46223,46600..46683, 46743..46899,46949..47030) /locus_tag="TcasGA2_TC006261" /gene_synonym="AUGUSTUS-3.0.2_06261" /note="transcript variant 2" /codon_start=1 /product="Proton-coupled folate transporter-like Protein" /protein_id="KYB25977.1" /db_xref="BEETLEBASE:TC006261" /translation="MMPSPSWQPPERRSLLYYLKLITVEPTMVLYMMAFMTTSVVEQA FFVNKACRVNHGLNASICDNLTEYEELNKEVQVTVSDFHLYNDVAGHVVPIILALFMG AWSDKRGRKLPLLIGLTGKLYYSVMVVVNATQDTWPVEYIVYTATLPMAFTGADVAIF AAAFTYLVDISTQESRTMRVTLLEVCYLATMPTGIALGKVLFNQVVNKSYAVMFGINV ALLFLAIVYSFLRLDWRTNSRQQPLSEAPNLFTDFFDYNHVVDTGKTLFKSRRNNQRC YLLILIAMMAFYTFQRDEKAMSYLYVQLIFKWTFDEFSNFRTVQSAIQDVFLLCAIPL MSRVLGWRDTIIIMIGALAHSVGRIFFATADESWMFYLGGVFAAIGPIVAPVIRSMVS KLVANSEKGKTLAVLAVADNAIPLISGTMYSKVYNATIHTHPNAIFYLTMATQMTVFV LILFIHVKAKDEYLIHEDEEVKTECLRDD" gene complement(47096..50357) /locus_tag="TcasGA2_TC005893" /gene_synonym="AUGUSTUS-3.0.2_05893" /db_xref="BEETLEBASE:TC005893" mRNA complement(join(47096..47323,48466..48875,48923..49186, 49967..50116,50168..50357)) /locus_tag="TcasGA2_TC005893" /gene_synonym="AUGUSTUS-3.0.2_05893" /product="hypothetical protein" /db_xref="BEETLEBASE:TC005893" CDS complement(join(47120..47323,48466..48875,48923..49186, 49967..50116,50168..50297)) /locus_tag="TcasGA2_TC005893" /gene_synonym="AUGUSTUS-3.0.2_05893" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08263.2" /db_xref="BEETLEBASE:TC005893" /translation="MRKLCFLLLEFITATPMLPNFDIWNDNNNRVAHPEMNISRLPKV LNFFPVPVEEECLSNDQRRKGICMNAYECKIEGGTSHGPCALGFGVCCVFTATCNEEI HNNITYFVNPHFPDLSKDMESCSLTVKKIDPEISQFRLDFIHFNLGQPNRKTGVCEDD IFVLNGGRRQLKLCGLNSGQHAYFDVENMDSVATIEMKLSKKAVTRLWEVRVTQIPFT QRAPVGCLQYHTGTTGTLKTMNFAENGRHLADQDYNICIRQEQDMCSIVYEPCHENAF RISPNNDDNVTEDVGSGETPEPRADECSDKVVLPCDSEDLLMPQDVGPGFCTLVHCGE SLCPAGETPCRIESSITPFMIGVHFGPNAREAPADDNLGMCLNYEQMPCNV" gene 52239..52909 /locus_tag="TcasGA2_TC006262" /gene_synonym="AUGUSTUS-3.0.2_06262" /db_xref="BEETLEBASE:TC006262" mRNA join(52239..52344,52396..52909) /locus_tag="TcasGA2_TC006262" /gene_synonym="AUGUSTUS-3.0.2_06262" /product="Pupal cuticle protein C1B-like Protein" /db_xref="BEETLEBASE:TC006262" CDS join(52333..52344,52396..52836) /locus_tag="TcasGA2_TC006262" /gene_synonym="AUGUSTUS-3.0.2_06262" /codon_start=1 /product="Pupal cuticle protein C1B-like Protein" /protein_id="EFA08603.1" /db_xref="BEETLEBASE:TC006262" /translation="MAFKLVILAAAFVCANAGLLPAAAPAVAYSAAPAVSHVSYASPA VSYAAPAITSQHSNTFRSFANLGQVSTYSKTIDTPFSSVSKADVRVSNPGFQYAAPVA HAAAPAIGVAYSAAPVAHAAAPAIGVAYSAAPAVSHVTYSGLGFSYGW" gene complement(54009..81927) /locus_tag="TcasGA2_TC034013" /gene_synonym="AUGUSTUS-3.0.2_34013" mRNA complement(join(54009..57103,59570..59680,59846..59923, 60153..60215,60349..60491,62132..62223,62408..62595, 80902..81584,81665..81927)) /locus_tag="TcasGA2_TC034013" /gene_synonym="AUGUSTUS-3.0.2_34013" /product="hypothetical protein" CDS complement(join(55389..57103,59570..59680,59846..59923, 60153..60215,60349..60491,62132..62223,62408..62595, 80902..81268)) /locus_tag="TcasGA2_TC034013" /gene_synonym="AUGUSTUS-3.0.2_34013" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25978.1" /translation="MSGSEGGVVRSGYLKKLKTSRKKFFVLRAETADASARLEYYDSE RKFNNGLPPKRSIPLKNCFNINKRLDTKHKHVIALYTKDDCFCVVLDNDDDLDSWLKA LLKLQHGEEVVDGETPKPTFEHVWQVTVLNRGLGNAGLTGNYRLCLTDKTLSLIKRDC EKPTIELNLSNIRSCGNLRDFFFLEIGRSSTLGAGELWMQTEDNNIAQNVHSTVFHAM STNSSSKDELGPKSRNRSSSATESSKPNMTRKIHIAPKCHIFLPPDVFHTSDTQVIPA GSSTQHPLVSGVASFYQHLIQRGAKASERRHSISAGSLTHCGVISHQRTQSLPLANPA PLSDHSHSRKRPKCMSRERCDSMPSRARTTSEGNHRHLNPYRPASLYGRDISHSPPLG SPVSPPCSTDSAGSSYSLTDETDVCTEMEPSLGRYGHSLTPDEAIAEEDCPDSPPYNN YISMTLHSSDDGYVDMSPRGRHHNSPTASMSSVTSGTPSTDMRFAEYPLEKVTSYLAD DDGRPARAYSVGSKPERYKKYTEMGGNSDNLRARALSVGSKKPPARVLPPHGYHHPGT KSSSAPILTNSRGQGSYNSIGPMDDLMEMDFSHNSGYMDMKPVNSGYVEMKPGRKPET SPYVDMSSGSSPAKPSYISPAATTTQTEVYMEMDPRKNHSEYLSMSFTKKLPSPGSPG TPEGYVEMSLGRGHNPSQLTEDYANMSLNNTKKRPNRKKDKNRSEPINIQGGPNPRSL LLARKHSTGTPPTMYLPLVEATPHDSKDSSSSSINTPSSSSTIFPISLNSPSKATPDY IPMDFDKSDYVNYDPKPGVGEFRPINESNDDEGRAYEVLRPSSSESCSTIGGSRPASV SSAHMHYASLDLDEGGNRSPRTVKGSGGEQGEVTLTYAAIDFVKSEGLKHNAVAATNA KVKH" assembly_gap 63385..63608 /estimated_length=224 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 63629..64223 /locus_tag="TcasGA2_TC034014" /old_locus_tag="TcasGA2_TC006263" /gene_synonym="AUGUSTUS-3.0.2_34014" mRNA 63629..64223 /locus_tag="TcasGA2_TC034014" /old_locus_tag="TcasGA2_TC006263" /gene_synonym="AUGUSTUS-3.0.2_34014" /product="hypothetical protein" CDS 63652..64179 /locus_tag="TcasGA2_TC034014" /old_locus_tag="TcasGA2_TC006263" /gene_synonym="AUGUSTUS-3.0.2_34014" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25979.1" /translation="MVFPGIPFALCVFFSHQIITCMSRSPSSDSILEIINTKEVERLL AEKKRNISREERRYLLENELDENFIPPDQEFEIQKLKLLDEERAPRTENPRVDLNAFL RRNNHSEPYRTTELLQDLRGFNGRKLLKSSKNALFVTKKEYLQRDWCKTEPLIQKVKV EGIFRWSSIGKLIYT" assembly_gap 64798..74467 /estimated_length=9670 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 79505..79616 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(83275..85997) /locus_tag="TcasGA2_TC005890" /gene_synonym="AUGUSTUS-3.0.2_05890" /db_xref="BEETLEBASE:TC005890" mRNA complement(join(83275..84554,85558..85997)) /locus_tag="TcasGA2_TC005890" /gene_synonym="AUGUSTUS-3.0.2_05890" /product="hypothetical protein" /db_xref="BEETLEBASE:TC005890" CDS complement(join(84106..84554,85558..85771)) /locus_tag="TcasGA2_TC005890" /gene_synonym="AUGUSTUS-3.0.2_05890" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08262.1" /db_xref="BEETLEBASE:TC005890" /translation="MASRIRVTRTVIKRKASASRVMRNAEKIIEAVRDRPFLYDQAFQ TFKHIGTKNRNWMEVAKIVYGREDKVTVNKVKIQWKSLRDAFVKQQRKRQSSPKRKLR PYIYESEMQFLLPHILLKERDEESSPPLSNVEVKTEDCSSLSLSGESPDAPPLAEESV WEQQQQQHNAKTTHHPVDAFFYGIAQTVKQLKPMTVAQIKKSVANIVMDAEISEIEEE GA" gene complement(87391..89927) /locus_tag="TcasGA2_TC005889" /gene_synonym="AUGUSTUS-3.0.2_05889" /db_xref="BEETLEBASE:TC005889" mRNA complement(join(87391..87771,88842..89442,89497..89588, 89637..89800,89880..89927)) /locus_tag="TcasGA2_TC005889" /gene_synonym="AUGUSTUS-3.0.2_05889" /product="Nitrogen permease regulator 2-like protein" /db_xref="BEETLEBASE:TC005889" CDS complement(join(87418..87771,88842..89442,89497..89588, 89637..89753)) /locus_tag="TcasGA2_TC005889" /gene_synonym="AUGUSTUS-3.0.2_05889" /codon_start=1 /product="Nitrogen permease regulator 2-like protein" /protein_id="EFA08261.1" /db_xref="BEETLEBASE:TC005889" /translation="MENTGYVLNNFDHTSQEGPIRCIFFCEFHPTAGPIISCQEPEQY ISKELFDSISVYIITKAELQKSTITVTLSDYKILGFPVRIDDKKYPRNAYHFNLCLVC DSNVRTVHYEPVVIKLSDYLMAMEIESSFLSDGKAATKLAPILKQVIEELNTKGECAL TEGPTATHLKVVHVRSDPAPVADHQVPVFIKPLPDQQWDLTTQQVAPYIDGFNHVARI AALSDVENNLVKACVQNLVYYGVVALVPLFQYGNVYCTTPQLNILAHDVNLQNKCLKY VAVSQRQLPNFRDVFRMFAAMTRGTTMRDLCLRFNPANLRINERKLVQIGVLEGLIRR VHKYPILLSDTSELQKSLSGAANLDEICCATGVATQQLEDQLERDHNIVLLWK" gene 91239..92140 /locus_tag="TcasGA2_TC006264" /gene_synonym="AUGUSTUS-3.0.2_06264" /db_xref="BEETLEBASE:TC006264" mRNA 91239..92140 /locus_tag="TcasGA2_TC006264" /gene_synonym="AUGUSTUS-3.0.2_06264" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006264" CDS 91487..92071 /locus_tag="TcasGA2_TC006264" /gene_synonym="AUGUSTUS-3.0.2_06264" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08604.2" /db_xref="BEETLEBASE:TC006264" /translation="MFDCQAGKLDPYECPSCKFKTFMKIHLHRHWKLVHEPSSGASPH DLAHFSKIFACRICETTTHSKLIHLGHKRFCIQRKIHSCDSCPYVTAVASKLHQHKCN SHPTTSDNHKELRRLITKPPIVKVENVGAGRPIKGGYKKDKFFCGYCDLQSSSIHTVK AHFVHDHMNNQVLSKNVVGSHVGRVIYFRVLAPD" gene complement(93827..94977) /locus_tag="TcasGA2_TC005888" /gene_synonym="AUGUSTUS-3.0.2_05888" /db_xref="BEETLEBASE:TC005888" mRNA complement(93827..94977) /locus_tag="TcasGA2_TC005888" /gene_synonym="AUGUSTUS-3.0.2_05888" /product="Zinc finger protein 711-like Protein" /db_xref="BEETLEBASE:TC005888" CDS complement(93913..94884) /locus_tag="TcasGA2_TC005888" /gene_synonym="AUGUSTUS-3.0.2_05888" /codon_start=1 /product="Zinc finger protein 711-like Protein" /protein_id="EFA08260.1" /db_xref="BEETLEBASE:TC005888" /translation="MEPIFPKIIKREAKDFHCFEKLEPYSCLNCNYKTSLLSHLKTHE TKTKTNSYKCGNCDFTAYSLLIILKHVSVSCPKNNWYHCTHCTYKTRARKYLKNHIKY THTPDPNIHWFSCDLCPFRSKWKGNLKGHIAAKHQPPTPREAMKCPQCPFTTTWKNSL RKHFCIRHTHLTTRQKHKCEHCPFETIRSDSLKRHMLVKHTPCEDIRWYKCEICGLRT KRADHLKRHKYETHGIPKIEQKNKICSCTANDNSFRCQLCPSHFSRSFNLTKHVKEKH GSNEIQGQIKCEKCPFKTLWKKSLNVHVLLKHGASFHGNRCDFHGNR" gene complement(95608..98477) /locus_tag="TcasGA2_TC005887" /gene_synonym="AUGUSTUS-3.0.2_05887" /db_xref="BEETLEBASE:TC005887" mRNA complement(join(95608..96135,97784..98132,98193..98477)) /locus_tag="TcasGA2_TC005887" /gene_synonym="AUGUSTUS-3.0.2_05887" /product="Protein charybde-like Protein" /db_xref="BEETLEBASE:TC005887" CDS complement(join(96051..96135,97784..98132,98193..98337)) /locus_tag="TcasGA2_TC005887" /gene_synonym="AUGUSTUS-3.0.2_05887" /codon_start=1 /product="Protein charybde-like Protein" /protein_id="EFA08259.1" /db_xref="BEETLEBASE:TC005887" /translation="MLRKRLEEDKPSKSTVFSKLLVKSPDLAAKTMSSDIIESVLVDA PAPSCPVLVAPTDRGLCVTLAALTYRLERELRAAKRTHLSCGEVLLPSGLLHRIARDV LGMAESEPCGIRGCLIYVNFEGVEQCRKLASFKCDPETATTFELKLTFKQNPTGWNFI PQFLKNLATGGTIVVSPAYVLTKKKLYRSMLE" gene 101009..101704 /locus_tag="TcasGA2_TC006265" /gene_synonym="AUGUSTUS-3.0.2_06265" /db_xref="BEETLEBASE:TC006265" mRNA join(101009..101161,101211..101704) /locus_tag="TcasGA2_TC006265" /gene_synonym="AUGUSTUS-3.0.2_06265" /product="Brain protein I3-like Protein" /db_xref="BEETLEBASE:TC006265" CDS join(101077..101161,101211..101401) /locus_tag="TcasGA2_TC006265" /gene_synonym="AUGUSTUS-3.0.2_06265" /codon_start=1 /product="Brain protein I3-like Protein" /protein_id="EFA08605.1" /db_xref="BEETLEBASE:TC006265" /translation="MFFRNENQESPFQEQYISSTDRAPNLTSESQSSTNAEDLHANCP VCRVGVLERKFTKCGIVLAVLFFPLGIVCCFLSSQKKCNRCGYDEGI" gene 103709..105022 /locus_tag="TcasGA2_TC006266" /gene_synonym="AUGUSTUS-3.0.2_06266" /db_xref="BEETLEBASE:TC006266" mRNA join(103709..104324,104379..105022) /locus_tag="TcasGA2_TC006266" /gene_synonym="AUGUSTUS-3.0.2_06266" /product="Protein charybde-like Protein" /db_xref="BEETLEBASE:TC006266" CDS join(103912..104324,104379..104463) /locus_tag="TcasGA2_TC006266" /gene_synonym="AUGUSTUS-3.0.2_06266" /codon_start=1 /product="Protein charybde-like Protein" /protein_id="EFA08606.1" /db_xref="BEETLEBASE:TC006266" /translation="MEVLTNHLADYQKSEKANFWYYDPSKQVQEADGDSPVSFLSKRL EEEIRKAKRTHLSCGEVLLPCGLLQKVAEDVLEIAETELYGLKGCTLYLLYEGEEDCR RLSNFKIDPTTPSTFEIYLTFKQANAGWTFLPQFLKKITRGSTVVISTEYELTKKKLY RILRK" gene 109178..109706 /locus_tag="TcasGA2_TC006267" /gene_synonym="GLEAN_06267" /db_xref="BEETLEBASE:TC006267" mRNA join(109178..109192,109488..109706) /locus_tag="TcasGA2_TC006267" /gene_synonym="GLEAN_06267" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006267" CDS join(109178..109192,109488..109706) /locus_tag="TcasGA2_TC006267" /gene_synonym="GLEAN_06267" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08607.1" /db_xref="BEETLEBASE:TC006267" /translation="MRHIDPYRRVEIFALGKTALRGERATFAKVRLCERLTDAIFTPN QVNFRRGGNSIGGEAATLSMRCARKAGCSRFSS" gene complement(112985..114035) /locus_tag="TcasGA2_TC005886" /gene_synonym="AUGUSTUS-3.0.2_05886" /db_xref="BEETLEBASE:TC005886" mRNA complement(join(112985..113384,113440..113782, 113893..114035)) /locus_tag="TcasGA2_TC005886" /gene_synonym="AUGUSTUS-3.0.2_05886" /product="Protein charybde-like Protein" /db_xref="BEETLEBASE:TC005886" CDS complement(join(113300..113384,113440..113782, 113893..113938)) /locus_tag="TcasGA2_TC005886" /gene_synonym="AUGUSTUS-3.0.2_05886" /codon_start=1 /product="Protein charybde-like Protein" /protein_id="EFA08258.1" /db_xref="BEETLEBASE:TC005886" /translation="MEIITLTNQFNNNVGESEVVLDSEVLAVEALAKRFGDELKKAKR AHFACGEVLLPADLTRALAKDVLAKAETEPCGLKGCTIFINFESGEERRRLSVVNCDP STPTTFELYLTLRQNVNGWNHFLPQFLKKMTRSGTVMISSEYDLQKKKLYRSYDD" gene complement(117423..122025) /locus_tag="TcasGA2_TC005885" /gene_synonym="AUGUSTUS-3.0.2_05885" /db_xref="BEETLEBASE:TC005885" mRNA complement(join(117423..117525,121095..121306, 121356..121833,121885..122025)) /locus_tag="TcasGA2_TC005885" /gene_synonym="AUGUSTUS-3.0.2_05885" /product="hypothetical protein" /db_xref="BEETLEBASE:TC005885" CDS complement(join(117453..117525,121095..121306, 121356..121833,121885..121970)) /locus_tag="TcasGA2_TC005885" /gene_synonym="AUGUSTUS-3.0.2_05885" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08257.1" /db_xref="BEETLEBASE:TC005885" /translation="MSSRKLWEKKSSRSSVKSRSRSSSLNKNLRSISEIEENGETIVR GIMHEILENSLETIQKRYMERQTIKFVVHCAHQALTKALKMHFYQHNDYIRSADFWGS EKRIEPSFPDSWAINEIPATKNIAEEEELNTLKRIQSEVNRKGGEILVDSTVDLISEP SESLLEDIRAIIDDIVDNLPVVFEETPEKLEPVTSAFTLVVEGQQSYTDFKMKPQMSR IAAWFPPTVKLPRIDLPESGNSRRHKDSNESLTHETLPPIRTDANYRCLSGAAPEEKA KKTNRN" assembly_gap 123731..124411 /estimated_length=681 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(125059..130455) /locus_tag="TcasGA2_TC005884" /gene_synonym="AUGUSTUS-3.0.2_05884" /db_xref="BEETLEBASE:TC005884" mRNA complement(join(125059..126695,130022..130455)) /locus_tag="TcasGA2_TC005884" /gene_synonym="AUGUSTUS-3.0.2_05884" /product="Heat shock 70 kDa protein cognate 1-like Protein" /db_xref="BEETLEBASE:TC005884" CDS complement(join(125353..126695,130022..130223)) /locus_tag="TcasGA2_TC005884" /gene_synonym="AUGUSTUS-3.0.2_05884" /codon_start=1 /product="Heat shock 70 kDa protein cognate 1-like Protein" /protein_id="EFA08256.1" /db_xref="BEETLEBASE:TC005884" /translation="MSELVVGIDLGTTNSCIAVERNGKIEVIPNREGNRTTLSYVYYG EDSILVGKTAKYMASANPSNGIYEIKRLIGCLHDDPDIESERKSLNYELVRGTNGEIL IQVEQNSEKFHTLPEEVCARILHRLKIDAEMYLGQKVSKAVVTVPAYFNNNQRAATRD AARIAGFEVLKLVNEPSAAALAYVRENRIKNGRVILIYDLGGGTFDVSIVRTENGTIK VLSVDGDTHLGGQDFLNRLVDHVVDYVQTKHGIKVRENKRLMMNILNSCEKTKKILTS ANRTVIPLEFSGHFDQLEVTREQFEELNRDLFAKTVKILDNCIRNRRMSKEEIDEVLL VGGSSRIPRIETLLKAYFDKPIQRNINADEAIAIGAALEAHHFAQTHHNSLLIDVLPL SIGTVFDEETIFFNFARNTPLPANSKHVHVFKNRKQKNCILSVYEGGHLDCNKNVLLG AHEIKWTATTKKNRNVEITMQINNYGIIWVTARGESIKTFSIALNKGRLEDDEIRKLS RGLQVS" assembly_gap 128169..128567 /estimated_length=399 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 131777..136891 /locus_tag="TcasGA2_TC034015" /old_locus_tag="TcasGA2_TC006268" /old_locus_tag="TcasGA2_TC006269" /gene_synonym="AUGUSTUS-3.0.2_34015" mRNA join(131777..132104,133396..133643,133694..133830, 133883..133993,135781..135959,136014..136258, 136307..136443,136490..136891) /locus_tag="TcasGA2_TC034015" /old_locus_tag="TcasGA2_TC006268" /old_locus_tag="TcasGA2_TC006269" /gene_synonym="AUGUSTUS-3.0.2_34015" /product="Serine protease 53-like Protein" CDS join(131857..132104,133396..133643,133694..133830, 133883..133993,135781..135959,136014..136258, 136307..136443,136490..136681) /locus_tag="TcasGA2_TC034015" /old_locus_tag="TcasGA2_TC006268" /old_locus_tag="TcasGA2_TC006269" /gene_synonym="AUGUSTUS-3.0.2_34015" /codon_start=1 /product="Serine protease 53-like Protein" /protein_id="KYB25980.1" /translation="MKIFFVYLICCNFLKIRAVPIVTGFSQPIEPNLGEFPFHASLMQ LKPDKTYHSFCGGSLIHPRWVLTAAHCIQLDETSPAFKPGEVFVALGSIYRSGDKAQV LRVEKLVIHPTYLKTGGRNDIGLVRLAKSALLGRNVKLIQLHTNNKEVLLNQTVFLTG FGIINDLYETPIRLRKAVLHVTNYDKCFSEAQFKNVEICAASRIAEGKACKGDSGGPL FLTRRGHHVQIGVTSHLTLLPFCRVAFNNSGNFNPIEPTSGEYPFHANLLQVINRNTL FSFCGGSLIHPRWVLTAAHCIQENRHTRRLPPGELRIALGSVYRSGKKAQILRPIKTI IHPTYLKTDRNDIALIKLEKSAKLTASVNLIRLHVDNNENLLQKTAFLTGFGYTDDGG PSPKRLRKAILHIADYKKCSGDPRLRHVEICGASTIAEGKTCDGDSGGPLFIRKNNKY VQVGITSYLARSPKCRLSNNNSVYTRVSAYIAWISGITGINFRKFNQN" gene complement(137197..138944) /locus_tag="TcasGA2_TC034825" /gene_synonym="AUGUSTUS-3.0.2_34825" mRNA complement(join(137197..137545,137602..137788, 137840..137983,138032..138470,138508..138591, 138636..138944)) /locus_tag="TcasGA2_TC034825" /gene_synonym="AUGUSTUS-3.0.2_34825" /product="DNA polymerase subunit gamma-2, mitochondrial -like protein" CDS complement(join(137262..137545,137602..137788, 137840..137983,138032..138470,138508..138591, 138636..138931)) /locus_tag="TcasGA2_TC034825" /gene_synonym="AUGUSTUS-3.0.2_34825" /codon_start=1 /product="DNA polymerase subunit gamma-2, mitochondrial -like protein" /protein_id="KYB25981.1" /translation="MSFLRCGFARVRYFCIQSVGKVNYFVPKAPTRSKIDRNKLPPRT SIDAKTIALLERLSLVDCANKQGIETLEDAIAFADQIQQVDTSNIEPLVTVLEDRPLR TREDCVTEGNCREDILQNAEITEEDLARICCTMTFEKIVKLCEKHGFLRRIANPRLEM FKIGPTGALLQENLHTEWLNNIVISKDIQMFHCVDDFAATFDFAKATCLGIPPFGISR VTQRKLRVQEQLDKTGFEKYFDQGRIYECCVFMPPKDVTQFFHQWQRERKIWWRRFSS SPGRYILTEGTQNVEILAKYPWGDQLVESLSVVSKIEGLTSGQLQVQEGKKLVEMHCV VSKISSVTMLLNTICDAYEEPLFQEKERPLFRFHRKLAPYKISFSVPSGTKAVTNELK DLAVYLCRQLRKNHISCLYLPSSYKNTLDFQWKQYDQLGVPYNVLLNEKTLKNGIVFL RSRDTTLKEQVHVADLAPYVEKLFKNY" gene complement(139108..140285) /locus_tag="TcasGA2_TC005882" /gene_synonym="AUGUSTUS-3.0.2_05882" /db_xref="BEETLEBASE:TC005882" mRNA complement(join(139108..139400,139451..139746, 139791..139895,139943..140285)) /locus_tag="TcasGA2_TC005882" /gene_synonym="AUGUSTUS-3.0.2_05882" /product="Protein KTI12 homolog-like Protein" /note="unusual splice" /db_xref="BEETLEBASE:TC005882" CDS complement(join(139134..139400,139451..139746, 139791..139895,139943..140102)) /locus_tag="TcasGA2_TC005882" /gene_synonym="AUGUSTUS-3.0.2_05882" /note="unusual splice" /codon_start=1 /product="Protein KTI12 homolog-like Protein" /protein_id="EFA08254.2" /db_xref="BEETLEBASE:TC005882" /translation="MPLIVVTGVPCSGKTTRSTELKQFFESHGKEVHVVSEFDQIIKA NFEKNAFFSDAAAEKHIRSLLKSEVLKLITQKNVVILDALNYIKGYRYELYCGSKANK NTQCTVHTEINRDEAWKFNEKRPELERYIRDTFDALLMRYEDPDGKNRWDSPLFVVFP GQELDKSAIMSCLFDSEPVVPNMSTQNPPLNSTNLYDLDQVTKKITDGLVKSKNMGVQ GAVKIEDFPHLSIDISNVTVQKLMILRRQYLSYCKLHPPDTKQIPQLFIQYLITSLQ" gene 140437..141584 /locus_tag="TcasGA2_TC006270" /gene_synonym="AUGUSTUS-3.0.2_06270" /db_xref="BEETLEBASE:TC006270" mRNA join(140437..140557,140607..140710,140762..140897, 140941..141131,141177..141584) /locus_tag="TcasGA2_TC006270" /gene_synonym="AUGUSTUS-3.0.2_06270" /product="Enoyl-CoA hydratase domain-containing protein 3, mitochondrial-like Protein" /db_xref="BEETLEBASE:TC006270" CDS join(140534..140557,140607..140710,140762..140897, 140941..141131,141177..141546) /locus_tag="TcasGA2_TC006270" /gene_synonym="AUGUSTUS-3.0.2_06270" /codon_start=1 /product="Enoyl-CoA hydratase domain-containing protein 3, mitochondrial-like Protein" /protein_id="EFA08608.2" /db_xref="BEETLEBASE:TC006270" /translation="MLGLRQPKTRLIVQKCFYSSGAPTHMNVQNGIAKIVMCDQKTRN SLSISMMDHLINNISETSADKSTRVIIIGAEGPIFSAGHNLKELSPEHGKAQQNKVFS LAATLMTKIIDCPVPVIARVDGLAAAAGCQLVAQCDLAFCTEKSTFSTPGANFGIFCS TPGIALARTVPKTTALKMLLTGQPISSHEAEMRGLITKVCSDLDGEIAAVCGAIMGKS RSVIELGKRFYYEQVNAEVKKAYEMGGRKMVENLQIEDGQEGIRSFIEKRKPQWTH" gene 141637..147092 /locus_tag="TcasGA2_TC006271" /gene_synonym="AUGUSTUS-3.0.2_06271" /db_xref="BEETLEBASE:TC006271" mRNA join(141637..141822,141963..142218,142330..142751, 145703..147092) /locus_tag="TcasGA2_TC006271" /gene_synonym="AUGUSTUS-3.0.2_06271" /product="Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like Protein" /db_xref="BEETLEBASE:TC006271" CDS join(141760..141822,141963..142218,142330..142751, 145703..146941) /locus_tag="TcasGA2_TC006271" /gene_synonym="AUGUSTUS-3.0.2_06271" /note="accepted without modification" /codon_start=1 /product="Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like Protein" /protein_id="EFA09226.1" /db_xref="BEETLEBASE:TC006271" /translation="MSGLLKIQTIFPKHILTNVAKNPKVLAQGLHIGVDKKNAKVSSD AVSKVYPIVDHTYDAVVVGAGGAGLRAAFGLVAEGFKTAVVTKLFPTRSHTVAAQGGI NAALGNMEEDNWQWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTSE GKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGQSLRYDCNYFIEYFALD LIMEDGECRGVIALCLEDGTIHRIRAKNTVLATGGYGRAFFSCTSAHTCTGDGTAMVA RAGLPSQDLEFIQFHPTGIYGAGCLITEGCRGEGGYLINSQGERFMERYAPVAKDLAS RDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPAEQLHTRLPGISETAMIFAGVDVTR EPIPVLPTVHYNMGGIPTNYKGQVLTNVNNQDKVVKGLYACGEAASSSVHGANRLGAN SLLDLVVFGRACAKTIAEEHKPGEKIGDIRENAGEASVANLDWCRYAKGAIPTATLRL QMQKTMQTHAAVFRTEETLQEGCKLMEGLYSNLKDLQVTDSSLIWNSDLVETLELQNL MLNACQTIVAAENRKESRGAHAREDYKLRIDEYDYSKPVEGQQKKPLEQHWRKHTLTT IDEKTGKVSIRYRPVIDDTLNKNECSTVPPAIRSY" gene complement(148891..149427) /locus_tag="TcasGA2_TC005881" /gene_synonym="AUGUSTUS-3.0.2_05881" /db_xref="BEETLEBASE:TC005881" mRNA complement(join(148891..148987,149033..149246, 149294..149427)) /locus_tag="TcasGA2_TC005881" /gene_synonym="AUGUSTUS-3.0.2_05881" /product="hypothetical protein" /db_xref="BEETLEBASE:TC005881" CDS complement(join(148921..148987,149033..149235)) /locus_tag="TcasGA2_TC005881" /gene_synonym="AUGUSTUS-3.0.2_05881" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08253.1" /db_xref="BEETLEBASE:TC005881" /translation="MSVVPQGVFAARKIRQNERNLKNYNHDSYLTPTKYSSKYMNSIW GMYNRYSVHNLKKNMDFFAFGGQKEQSVEAHSTDLKTLLAKPDVM" gene complement(149517..156207) /locus_tag="TcasGA2_TC005880" /gene_synonym="AUGUSTUS-3.0.2_05880" /db_xref="BEETLEBASE:TC005880" mRNA complement(join(149517..149841,149881..150074, 150123..150717,151293..152567,152752..153136, 154235..154513,154943..155770,156190..156207)) /locus_tag="TcasGA2_TC005880" /gene_synonym="AUGUSTUS-3.0.2_05880" /product="hypothetical protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC005880" mRNA complement(join(149517..149841,149881..150074, 150123..150717,151293..152567,152752..153136, 154235..154513,154789..154896,154943..155770, 156190..156207)) /locus_tag="TcasGA2_TC005880" /gene_synonym="AUGUSTUS-3.0.2_05880" /product="hypothetical protein" /note="transcript variant 3" /db_xref="BEETLEBASE:TC005880" mRNA complement(join(149517..149841,149881..150074, 150123..150717,151293..152567,152752..153136, 154235..155827)) /locus_tag="TcasGA2_TC005880" /gene_synonym="AUGUSTUS-3.0.2_05880" /product="hypothetical protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC005880" CDS complement(join(149712..149841,149881..150074, 150123..150717,151293..152567,152752..153136, 154235..154513,154943..155015)) /locus_tag="TcasGA2_TC005880" /gene_synonym="AUGUSTUS-3.0.2_05880" /note="transcript variant 2" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25982.1" /db_xref="BEETLEBASE:TC005880" /translation="MFKSLLPWKHRKTKVMVPEQTMEDDQNLEDQSLVPCQTCGRTFL PLPLKKHAPICEKNATKKRKVFDSLKQRVEGTDLAQFHQKSYLKKPLESAPKPQKNQW EENHQKLVDAIRSAKGNMSSVKKATPPPSLNERCPFCERHFGPKAFDRHVEWCKEHRS RIQKSPANVLLAKERLEARTKYKVPPLTKSKRVTVKEKYSSPSLNRTESICSVKSTPV VAKRSPSVRKPKSVLDLGKKTELKVDKRENGGKRFKTNVQSPCSVSFPLYPDFPNPLS FDSSRKYCPGREKINTNHVENLESITVAPVKFKKLVTWKDMSEKSPDSESVIVVYENS NVFGKKEATKSHTFIEELKEILTDSDSDFSKKQSEEVTVSNTTIEECKSAPEFANSDE DLTKLINSHIDSELSFSDLAENFQNCFISDEDSKHDLRENSDNLGEKHDSPSNDSLFS SRSTEKNDAILTASGEKHDLLLSSRSTEKNDSVISISGEKLDYPSNDSLFSSRLTEKN DPTGVVSGEKHDSLLSWRSTEKNNSVLSSSGEKLDSPSDDSLLSSHSALGEKHDSLLP KNDSVLTAPNIFCFGKVQNFNEYEVPKKRRKLNSTFIVQVPTFPKKSGFLPKIVTDVE KPIKIAVEEKIKSPMKLPILGKRQKKVRKENVEVKRDTSDVFLSYRSPVSSQYDPFVS AERQFKELLDCDTIRPHTAVEKAKSPPKKSVKSAETSNNKKRQSVIDPPVCFQDSEDD FELLENILNEKTNFKLDLNKNDDCFDIFSNTVTVERKYSDDMSSIDSNLINENDNLSI PENFKLDNYSPTSTEDTDTTIQNDFFEKIETTKKTKTKTGCNEVAKTKSKCVSKAKTT KEAEKNKNVENNKNCDIKAEDLFAVDDKMYAEYKIYEEMYLKEKEQRSNKKSKAKHSV KSYGIELEKSKVSDDSAYGSLTRAKMDSENVRMSKFCHECGNKYPLTTAKFCVECGVK RLVL" CDS complement(join(149712..149841,149881..150074, 150123..150717,151293..152567,152752..153136, 154235..154513,154789..154896,154943..155015)) /locus_tag="TcasGA2_TC005880" /gene_synonym="AUGUSTUS-3.0.2_05880" /note="transcript variant 3" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25983.1" /db_xref="BEETLEBASE:TC005880" /translation="MFKSLLPWKHRKTKVMVPEQTMEDVDFNQVLLFLCETAFVNCTE IVSCAPPTRIAFVATSDQNLEDQSLVPCQTCGRTFLPLPLKKHAPICEKNATKKRKVF DSLKQRVEGTDLAQFHQKSYLKKPLESAPKPQKNQWEENHQKLVDAIRSAKGNMSSVK KATPPPSLNERCPFCERHFGPKAFDRHVEWCKEHRSRIQKSPANVLLAKERLEARTKY KVPPLTKSKRVTVKEKYSSPSLNRTESICSVKSTPVVAKRSPSVRKPKSVLDLGKKTE LKVDKRENGGKRFKTNVQSPCSVSFPLYPDFPNPLSFDSSRKYCPGREKINTNHVENL ESITVAPVKFKKLVTWKDMSEKSPDSESVIVVYENSNVFGKKEATKSHTFIEELKEIL TDSDSDFSKKQSEEVTVSNTTIEECKSAPEFANSDEDLTKLINSHIDSELSFSDLAEN FQNCFISDEDSKHDLRENSDNLGEKHDSPSNDSLFSSRSTEKNDAILTASGEKHDLLL SSRSTEKNDSVISISGEKLDYPSNDSLFSSRLTEKNDPTGVVSGEKHDSLLSWRSTEK NNSVLSSSGEKLDSPSDDSLLSSHSALGEKHDSLLPKNDSVLTAPNIFCFGKVQNFNE YEVPKKRRKLNSTFIVQVPTFPKKSGFLPKIVTDVEKPIKIAVEEKIKSPMKLPILGK RQKKVRKENVEVKRDTSDVFLSYRSPVSSQYDPFVSAERQFKELLDCDTIRPHTAVEK AKSPPKKSVKSAETSNNKKRQSVIDPPVCFQDSEDDFELLENILNEKTNFKLDLNKND DCFDIFSNTVTVERKYSDDMSSIDSNLINENDNLSIPENFKLDNYSPTSTEDTDTTIQ NDFFEKIETTKKTKTKTGCNEVAKTKSKCVSKAKTTKEAEKNKNVENNKNCDIKAEDL FAVDDKMYAEYKIYEEMYLKEKEQRSNKKSKAKHSVKSYGIELEKSKVSDDSAYGSLT RAKMDSENVRMSKFCHECGNKYPLTTAKFCVECGVKRLVL" CDS complement(join(149712..149841,149881..150074, 150123..150717,151293..152567,152752..153131)) /locus_tag="TcasGA2_TC005880" /gene_synonym="AUGUSTUS-3.0.2_05880" /note="transcript variant 1" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08252.2" /db_xref="BEETLEBASE:TC005880" /translation="MSSVKKATPPPSLNERCPFCERHFGPKAFDRHVEWCKEHRSRIQ KSPANVLLAKERLEARTKYKVPPLTKSKRVTVKEKYSSPSLNRTESICSVKSTPVVAK RSPSVRKPKSVLDLGKKTELKVDKRENGGKRFKTNVQSPCSVSFPLYPDFPNPLSFDS SRKYCPGREKINTNHVENLESITVAPVKFKKLVTWKDMSEKSPDSESVIVVYENSNVF GKKEATKSHTFIEELKEILTDSDSDFSKKQSEEVTVSNTTIEECKSAPEFANSDEDLT KLINSHIDSELSFSDLAENFQNCFISDEDSKHDLRENSDNLGEKHDSPSNDSLFSSRS TEKNDAILTASGEKHDLLLSSRSTEKNDSVISISGEKLDYPSNDSLFSSRLTEKNDPT GVVSGEKHDSLLSWRSTEKNNSVLSSSGEKLDSPSDDSLLSSHSALGEKHDSLLPKND SVLTAPNIFCFGKVQNFNEYEVPKKRRKLNSTFIVQVPTFPKKSGFLPKIVTDVEKPI KIAVEEKIKSPMKLPILGKRQKKVRKENVEVKRDTSDVFLSYRSPVSSQYDPFVSAER QFKELLDCDTIRPHTAVEKAKSPPKKSVKSAETSNNKKRQSVIDPPVCFQDSEDDFEL LENILNEKTNFKLDLNKNDDCFDIFSNTVTVERKYSDDMSSIDSNLINENDNLSIPEN FKLDNYSPTSTEDTDTTIQNDFFEKIETTKKTKTKTGCNEVAKTKSKCVSKAKTTKEA EKNKNVENNKNCDIKAEDLFAVDDKMYAEYKIYEEMYLKEKEQRSNKKSKAKHSVKSY GIELEKSKVSDDSAYGSLTRAKMDSENVRMSKFCHECGNKYPLTTAKFCVECGVKRLV L" gene 154639..155763 /locus_tag="TcasGA2_TC006272" /gene_synonym="AUGUSTUS-3.0.2_06272" /db_xref="BEETLEBASE:TC006272" mRNA join(154639..155251,155303..155763) /locus_tag="TcasGA2_TC006272" /gene_synonym="AUGUSTUS-3.0.2_06272" /product="Oxidoreductase-like domain-containing protein 1" /db_xref="BEETLEBASE:TC006272" CDS join(155218..155251,155303..155589) /locus_tag="TcasGA2_TC006272" /gene_synonym="AUGUSTUS-3.0.2_06272" /codon_start=1 /product="Oxidoreductase-like domain-containing protein 1" /protein_id="EFA08609.1" /db_xref="BEETLEBASE:TC006272" /translation="MGVLKIVSTRFPLRNSIPNLAFFCRKCHDEKVEKPNEKPAENGD FPEEPTTCCMSGCANCVWLEYAEKLSQMYKDGGEEALKQINEKVTDPNMKAFLLHELR MRKK" gene complement(156220..159607) /locus_tag="TcasGA2_TC005879" /gene_synonym="AUGUSTUS-3.0.2_05879" /db_xref="BEETLEBASE:TC005879" mRNA complement(join(156220..156424,156478..156752, 158482..158789,158841..159172,159257..159607)) /locus_tag="TcasGA2_TC005879" /gene_synonym="AUGUSTUS-3.0.2_05879" /product="Galactokinase-like Protein" /db_xref="BEETLEBASE:TC005879" CDS complement(join(156311..156424,156478..156752, 158482..158789,158841..159172,159257..159418)) /locus_tag="TcasGA2_TC005879" /gene_synonym="AUGUSTUS-3.0.2_05879" /codon_start=1 /product="Galactokinase-like Protein" /protein_id="EFA08251.1" /db_xref="BEETLEBASE:TC005879" /translation="MAENIPEIAQVIKDAKAAFKAEFKQEAEIVVFAPGRVNLIGEHI DYNDGFVMPMALPLVTVIVGKKVSGEETTIITTNPDADPPKKATIEMPNKNALVKTIP PGPPKWSNYVKGVISNYVGETPPAFNALITSTVPTGGGLSSSAALEVATYTFLDALVG PSAVMPTDKALACQKAEHDYANVPCGIMDQFISVLGKKDHALLIDCRSMTSTLIPVAD PNVVVLITNSNVKHELTGSEYSSRRTQCQQAALLLKKLSLRDAKLEDIEYLKSINASE ETIKRARHAVTEIQRTQEAAEALKKKDFKKFGDLMVASHNSLRDDFEVSCEELDQLVK LAMEVKGVYGSRMTGGGFGGCTVTLVQKSAVNDVIAHVKKGYKGKPTFYICKPSDGAQ IVAK" gene 161279..167443 /locus_tag="TcasGA2_TC006273" /gene_synonym="AUGUSTUS-3.0.2_06273" /db_xref="BEETLEBASE:TC006273" mRNA join(161279..161612,162499..162774,162822..163309, 163362..163453,166559..167443) /locus_tag="TcasGA2_TC006273" /gene_synonym="AUGUSTUS-3.0.2_06273" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006273" CDS join(161448..161612,162499..162774,162822..163309, 163362..163453,166559..166722) /locus_tag="TcasGA2_TC006273" /gene_synonym="AUGUSTUS-3.0.2_06273" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08610.2" /db_xref="BEETLEBASE:TC006273" /translation="MSTISSGDELIDFIYQNSVQEVQKCKSVKTPIGKFRLLIRYCLV NKCLHFPLEALNKSDKKPYIYERNSIIGDEILSTILLSVLLQCKKINFQLDLFNYYFL DLTWGIPDRVKLELVPCQSLGINISFSENRAVIVHIRPNSVASESGEITVGDILANLN DVEINSSCKGRLNTILRLSKGRPINLIIIKASHNNDIFAPFKTILRDLKLGANHEQTP RQNEPKSGFKAAYLGCVSVGCKGSVKQIEEALKFHLNKFEINDRKPVSIEIGEINVKI LLETGEILFKHSFMQISSCGSAPNLPNYVAYIAGEENCDTANNFVCYIFYVHDVSLAY TILQSIVLFRILKEIREWVHVYSIAQEKYYGAVGFSKGQNHPSISYGNEDISYFVNHK FS" assembly_gap 161825..161977 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 165377..166367 /estimated_length=991 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(168543..169504) /locus_tag="TcasGA2_TC005878" /gene_synonym="GLEAN_05878" /db_xref="BEETLEBASE:TC005878" mRNA complement(join(168543..168685,169474..169504)) /locus_tag="TcasGA2_TC005878" /gene_synonym="GLEAN_05878" /product="hypothetical protein" /db_xref="BEETLEBASE:TC005878" CDS complement(join(168543..168685,169474..169504)) /locus_tag="TcasGA2_TC005878" /gene_synonym="GLEAN_05878" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08250.1" /db_xref="BEETLEBASE:TC005878" /translation="MHFFPYTYASSCGVLLEVRLQSHFILISVINEEFAVGAHFAERL MDLLVVISFAAGL" gene 173369..208876 /locus_tag="TcasGA2_TC006274" /gene_synonym="AUGUSTUS-3.0.2_06274" /db_xref="BEETLEBASE:TC006274" mRNA join(173369..173574,173760..173873,194099..194296, 203321..203445,203490..203640,208018..208115, 208169..208462,208511..208876) /locus_tag="TcasGA2_TC006274" /gene_synonym="AUGUSTUS-3.0.2_06274" /product="Down syndrome cell adhesion molecule-like protein Dscam2" /db_xref="BEETLEBASE:TC006274" CDS join(173502..173574,173760..173873,194099..194296, 203321..203445,203490..203640,208018..208115, 208169..208462,208511..208816) /locus_tag="TcasGA2_TC006274" /gene_synonym="AUGUSTUS-3.0.2_06274" /codon_start=1 /product="Down syndrome cell adhesion molecule-like protein Dscam2" /protein_id="EFA08611.1" /db_xref="BEETLEBASE:TC006274" /translation="MRVSNFFLILLVNLGEICVAILNSGPSYRNGGDILPRFASQPNT FSAVIGDTIVLPCEVQNLGSFVIVWKRGITLLTAGQQKITADPRISLVGYNLEVRDIR YSDQGDYTCQIGDGSHGDLIHTVEILMPPSIQIFPNNGDVLTTRKGATVSFECRASGN PTPVVQWSKKEGLLPSGLQVQTGYLLSLTNVQREDAGAYQCTASNGIGQAVTGEIKLH VLFPPEITVAKSWVNSGEGLEARLDCVVQADPPGEVSWYQNSFPLQQTDRRIMSSKGK IYTLTIKNVQFSDFGNYSCTVHNSIGKDRKYIELTGKPGPARIISPAYSNPDYYDLRW VVQSVLPIIEVKILYRRINATTFYDHKGQWHDLVIKPEQKYDAKTSERLQSFRITNLV PDSLYECLILTKNQHGYSDVSDVHQWFSSDKGRPFVGSTGQIHCLGIAVMILLQIPNV LL" assembly_gap 176991..177040 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 186536..186585 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 198240..198257 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(211460..213806) /locus_tag="TcasGA2_TC005877" /gene_synonym="AUGUSTUS-3.0.2_05877" /db_xref="BEETLEBASE:TC005877" mRNA complement(join(211460..211587,211635..211914, 211959..212164,212222..212870,213742..213806)) /locus_tag="TcasGA2_TC005877" /gene_synonym="AUGUSTUS-3.0.2_05877" /product="28 kDa heat- and acid-stable phosphoprotein-like Protein" /db_xref="BEETLEBASE:TC005877" CDS complement(join(211526..211587,211635..211914, 211959..212164,212222..212231)) /locus_tag="TcasGA2_TC005877" /gene_synonym="AUGUSTUS-3.0.2_05877" /codon_start=1 /product="28 kDa heat- and acid-stable phosphoprotein-like Protein" /protein_id="EFA08249.1" /db_xref="BEETLEBASE:TC005877" /translation="MPRGKFTNHKGRNRRFTNPEELEEERRREEQKKKWRHQQGDDTS SSEDEASGDKKISEEESDDSEESSDEGEVKAKGVSNLIEIENPNRVQKKSKKLATLNT EVDSKPQLSRREREEIERQKAQAHYQKLHAEGKTEQARADLARLAIIKQQREEAKKRR EAEQKEKEDAAKLKSAQTQKALGRK" gene complement(214484..215546) /locus_tag="TcasGA2_TC034016" /gene_synonym="AUGUSTUS-3.0.2_34016" mRNA complement(214484..215546) /locus_tag="TcasGA2_TC034016" /gene_synonym="AUGUSTUS-3.0.2_34016" /product="WW domain-containing oxidoreductase-like Protein" CDS complement(214572..215351) /locus_tag="TcasGA2_TC034016" /gene_synonym="AUGUSTUS-3.0.2_34016" /codon_start=1 /product="WW domain-containing oxidoreductase-like Protein" /protein_id="KYB25984.1" /translation="MNLPESDSEDELPPGWEERVTVDGSVFYANHLTKATQWTHPRTG KKKRVSGDLPFGWERCIDKTSGKVIYVDHENRRTTYTDPRLAFAVEEKDHPNDYRQRF DGSSTALQVLHGRDLNGKVALVTGANSGIGFETARSLAKHGASVIFACRDLEGAAEAI AKVREEKEAAGENCVAIYLDLGDLHSVDSFANQVKTMFKQIDMLILNAGVFGLAFSKT VDGFETTFQVNHLGHFYLTLLLRPLLVTGSRVVVVSSESHR" gene complement(215621..219696) /locus_tag="TcasGA2_TC034017" /old_locus_tag="TcasGA2_TC005874" /old_locus_tag="TcasGA2_TC005875" /gene_synonym="AUGUSTUS-3.0.2_34017" mRNA complement(join(215621..216050,218086..218120, 218207..219696)) /locus_tag="TcasGA2_TC034017" /old_locus_tag="TcasGA2_TC005874" /old_locus_tag="TcasGA2_TC005875" /gene_synonym="AUGUSTUS-3.0.2_34017" /product="Glucose dehydrogenase [FAD, quinone]-like Protein" CDS complement(join(215700..216050,218086..218120, 218207..219674)) /locus_tag="TcasGA2_TC034017" /old_locus_tag="TcasGA2_TC005874" /old_locus_tag="TcasGA2_TC005875" /gene_synonym="AUGUSTUS-3.0.2_34017" /codon_start=1 /product="Glucose dehydrogenase [FAD, quinone]-like Protein" /protein_id="KYB25985.1" /translation="MKTILCFTVLFLCANSQNLLNDFRRFFGASDVRDTANFRKSYDF VVVGAGSGGCVVANRLSENPEWSVLLLEAGDDENFLTDVPLIASLQTITSYNWGYKSE RLATACLGLIDGRCNMPRGKALGGTSVINFLLYTRGTKQDFDQWAELGNPGWGYDQVL PYFIKSENCTKCREIDGKYHGKSGYLSVEHPGYESPLVKRFIKSGEELGYKNNDPSAP YGLGFSKVLATMRNGMRCSASKAFLKPILHRTNLHVSIKTRVTKILIDPSTKQAYGVQ FWKNRRKFTVLATKEVVLSAGSINSPHLLMLSGVGPRDDLTRVGIPLLQNLKVGYNLQ DHMAMSALVFFVNESITVSDRGVQNPVDIFNYVFNGRGPYTIPGGAEALAFVQTKYAK IGGYPDIELVLGAGALNGDVYGSLRSLLGIPRSLFERVYAPHAYKPAFSIAPVLMRPK SRGRVVIKDGNPLHWPKLIPNYFENEEDVKTMVEGIKMARWSSSASVFCSSAITITQS RHFQKYNITMITTPFPGCETVPFGSDEYWACAVRHVATTLGHQVGTCKMGPPSDPDAV VDERLRVYGIKGLRVVDGSIMPNVVAGHTNAVIMMIGEKASDMIKQEWARK" gene complement(222845..223726) /locus_tag="TcasGA2_TC005873" /gene_synonym="AUGUSTUS-3.0.2_05873" /db_xref="BEETLEBASE:TC005873" mRNA complement(join(222845..223131,223213..223257, 223305..223541,223648..223726)) /locus_tag="TcasGA2_TC005873" /gene_synonym="AUGUSTUS-3.0.2_05873" /product="hypothetical protein" /db_xref="BEETLEBASE:TC005873" CDS complement(join(223046..223131,223213..223257, 223305..223541,223648..223714)) /locus_tag="TcasGA2_TC005873" /gene_synonym="AUGUSTUS-3.0.2_05873" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08245.2" /db_xref="BEETLEBASE:TC005873" /translation="MRLVILIVLLLSVIEISKSNFVWLISCHDNTECSHLKNAKCLNG FCNCGKKYSVCEDLKIIGRECDDLRTCNLSYSECGENGKCVCKEGFMPGSDLMSCLRV GGQVAGTNVTEDKLGNEKSLSQSISGQGCVFLLLIIFSVLFL" gene 226088..227432 /locus_tag="TcasGA2_TC034018" /gene_synonym="AUGUSTUS-3.0.2_34018" mRNA join(226088..226249,226365..226449,226496..226618, 226905..227042,227096..227432) /locus_tag="TcasGA2_TC034018" /gene_synonym="AUGUSTUS-3.0.2_34018" /product="hypothetical protein" CDS join(226389..226449,226496..226618,226905..227042, 227096..227322) /locus_tag="TcasGA2_TC034018" /gene_synonym="AUGUSTUS-3.0.2_34018" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25986.1" /translation="MIYATLPLIILLTTFFSTISGSALHGPCESNENCGTLDTFCENG TCVCRDNFRVFYDHCVQIATPVIPCTHKTICKTALGLKGICVDKHCACRSFHHFFNKQ CIKSKGLDEECDSDHQCYCGDDCTDKIECLNRICTCKRGFKIKGRRCIPDSNFVQEKS TASTKSVLIYVKLLSVLYFLNI" gene 229458..231209 /locus_tag="TcasGA2_TC006275" /gene_synonym="AUGUSTUS-3.0.2_06275" /db_xref="BEETLEBASE:TC006275" mRNA join(229458..229597,229646..229706,229751..229913, 229958..230093,230142..230292,230338..230581, 230636..230717,230765..230985,231038..231209) /locus_tag="TcasGA2_TC006275" /gene_synonym="AUGUSTUS-3.0.2_06275" /product="Putative dipeptidase MCYG_02918-like Protein" /db_xref="BEETLEBASE:TC006275" CDS join(229540..229597,229646..229706,229751..229913, 229958..230093,230142..230292,230338..230581, 230636..230717,230765..230985,231038..231175) /locus_tag="TcasGA2_TC006275" /gene_synonym="AUGUSTUS-3.0.2_06275" /codon_start=1 /product="Putative dipeptidase MCYG_02918-like Protein" /protein_id="EFA08612.1" /db_xref="BEETLEBASE:TC006275" /translation="MLKLLSLLAILPYLCHSLPATTPDLTPGRTALDNFPLIDGHNDL PYNLYSKLKNQISKFAFDSDLSNDTVFGFQACKSCFTDLERAKKGKLGGQFWVAYVDC NPSNYSTIVSRSFEQVDVIQRLIKKFSDRMQFVTTADGILDAFKNKKIASLIGLEGGH SIDNKMALLRQFYDAGVRYMTLTHTCNLPWADASPVDDSNNSPEVNLTKFGEKIVLEM NRLGMLVDLSHVSHNVMSRALDVSKAPVIFSHSSAFTVHNHHRNVQDDVLEKVKLNQG VVMVNFYTAFVGNDNATIDDVIKHINHIVDKAGIDCVGIGSDYDGVSSVPKGLEDVSK YPDLFDKLKEQNPERWTIANLEKLAGKNLYRVFKSVEAVRDQLATSMPDESLIPDEDL AENTASVGVLPTFISIVISAIILKL" gene 232868..240572 /locus_tag="TcasGA2_TC006276" /gene_synonym="AUGUSTUS-3.0.2_06276" /db_xref="BEETLEBASE:TC006276" mRNA join(232868..233041,233093..233636,234111..234342, 234398..234585,236504..237331,237773..237966, 238014..238289,238336..238527,240000..240572) /locus_tag="TcasGA2_TC006276" /gene_synonym="AUGUSTUS-3.0.2_06276" /product="Serine/threonine-protein kinase/endoribonuclease IRE2-like Protein" /db_xref="BEETLEBASE:TC006276" CDS join(232964..233041,233093..233636,234111..234342, 234398..234585,236504..237331,237773..237966, 238014..238289,238336..238527,240000..240467) /locus_tag="TcasGA2_TC006276" /gene_synonym="AUGUSTUS-3.0.2_06276" /codon_start=1 /product="Serine/threonine-protein kinase/endoribonuclease IRE2-like Protein" /protein_id="EFA08613.1" /db_xref="BEETLEBASE:TC006276" /translation="MRKRHIWLFFLLLGFTLGEELEVKREKIATTELAHETDERLLVF ATLSGDLVGVEPQTGRIRWKIKDRPIVQVPVDTTNAIIPIFLPDPRDGSLYLMGNNRE PLKKLPFTIPQLVASSPCRSSDGIFYTGKKKDTWFKLDPITGRKEQVLGWDTSPTCPI ESKKFVFIGRTKYDIMMVDSTNKLRKWNVTFYDYTAQTMSKEEMNNYELVHFASSSTG RLVTMDRRRGNLLWDSDLGSPVVAAYVLDSDGLLVAPFTSLANHTLNYLTTELLTHEG PQPQRMKLYPTLYVGDHRYGLYAIPSLVDQNVVTITASDGGPLLLGGPHAPDLPKPYP EYPIPGYNYRLPSNMYEGDPITFQSIPNFVIYVGHYNVPKYTDTKFLLGGGTPKVNLL TDESESNETPPPKTVPKSIEESDQQQPQTNKNRIKSYYKSVKLWVNQQENKGLKLVLI ILVGCVIAMFWYLQVQVREFQNMSQNGSRSSQQNSFGKNSSITAYSEELPDGLVRVGK ITFHPDQLLGKGCEGTFVYRGEFDSRQVAVKRLLPECFTFADREVALLRESDAHPNVI RYYCMEQDRLFRYIALELCQATLSEYVQGKCDRTMIKPLDILRQATSGLGHLHSLDIV HRDIKPHNVLLSVPNSQGEVKAMISDFGLCKKLQVGRVSFSRRSGVTGTDGWIAPEML NGNERTTCAVDLFSLGCLFYYVLSNGLHPFGDNLRRQANILSGDYNLDDLQGEEWQIN LQKPLLAAMISSKPNERPSCSAILKHPMFWDNAKILAFFQDVSDRVEKAETDDSVLQN LEEMNFTIVRTDWRTHIHEEVATDLRKYRSYRGESVRDLLRALRNKKHHFRELTKEAQ SLLGEIPDSFTSYWTKRFPLLLVHSWLAMQCVSDETAFQPYYHDTYKYSYQNFLQQIQ NYIVEKPDFYEFPKMKNRLFDTNPRKVRENVGLYRNLAPQEVVDVNEVNVTITDRRFK KSEVRIRSKKRASKRDEPLVWAIRQDK" gene complement(240575..245386) /locus_tag="TcasGA2_TC034019" /old_locus_tag="TcasGA2_TC005871" /old_locus_tag="TcasGA2_TC005872" /gene_synonym="AUGUSTUS-3.0.2_34019" mRNA complement(join(240575..241010,241244..241594, 244079..244342,244392..244606,244655..244822, 244867..245016,245063..245386)) /locus_tag="TcasGA2_TC034019" /old_locus_tag="TcasGA2_TC005871" /old_locus_tag="TcasGA2_TC005872" /gene_synonym="AUGUSTUS-3.0.2_34019" /product="hypothetical protein" CDS complement(join(240609..241010,241244..241594, 244079..244342,244392..244606,244655..244822, 244867..245016,245063..245237)) /locus_tag="TcasGA2_TC034019" /old_locus_tag="TcasGA2_TC005871" /old_locus_tag="TcasGA2_TC005872" /gene_synonym="AUGUSTUS-3.0.2_34019" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25987.1" /translation="MSENFDPPPKLPDREDANAPQPGDTPNERRTSDEKRRVKVSLPE IELNQAFKEEKPDDYLSLKSVSLSSIWSILKKDAERTIKEETEIDRDLLFASAGSEKS AESSRKTVSPPRSIRSEHVSGPEMSDVYEQPMEHDDISYAIPEDFITKTRRSTVSSSI HFVSDDFVKCVKSLDMATIAEEDETREFGDEDIEDIAIDRKLYSELYTIFEIRRYKEK LINNYLQARLAKYYMRRKMFYVLREMTPKVDEVIAKYHKDLESLEHLCDSAERDKALN NEEIKNLTLKRDAKVVDLETLFKNLIHMEQEFAKTLTLEKTGRTNVDKMTERFVRRQK NQTNLLIKLRMSYINLRNRFNEKMTTYENLDSLGPGYGIMDYVQLKADNRKLYDILEE KEAELTKLRLACKDTIQVLAHNREKSQVVNLDIEKLKEELQVTETELNDAREQLNYLK RERDNYRKIIKNIRLEYGLLTNPKLLRDMESAINEIDVLKDDIERTKNKYFLKRKQTE AVRRNMELYLAERKREEGRRLKILESVSSLEIKKKPTLVKKKSEPGMGFGSKKSVSIV DLPKRKKD" gene complement(247632..252106) /locus_tag="TcasGA2_TC005870" /gene_synonym="AUGUSTUS-3.0.2_05870" /db_xref="BEETLEBASE:TC005870" mRNA complement(join(247632..249568,251440..252106)) /locus_tag="TcasGA2_TC005870" /gene_synonym="AUGUSTUS-3.0.2_05870" /product="Regulator of microtubule dynamics protein 1-like Protein" /db_xref="BEETLEBASE:TC005870" gene 248310..256419 /locus_tag="TcasGA2_TC006277" /gene_synonym="AUGUSTUS-3.0.2_06277" /db_xref="BEETLEBASE:TC006277" mRNA join(248310..248783,249077..249185,255698..255755, 255811..256419) /locus_tag="TcasGA2_TC006277" /gene_synonym="AUGUSTUS-3.0.2_06277" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006277" CDS join(249077..249185,255698..255755,255811..256099) /locus_tag="TcasGA2_TC006277" /gene_synonym="AUGUSTUS-3.0.2_06277" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08614.2" /db_xref="BEETLEBASE:TC006277" /translation="MLRVESNTKLEGFTEFEEDILFDEDDPDFQAVPLMLVRKNMSLA SVHPAGLHSNHSSLAHSLDDLREGPQVLTIEELRLQMTTCFTCGVSWSDSHVSLDCAE CGGYALERPCPECEGGCGAVWKRDLSMSHASSKARWQGKCEKKDKGTNS" CDS complement(join(249210..249568,251440..252013)) /locus_tag="TcasGA2_TC005870" /gene_synonym="AUGUSTUS-3.0.2_05870" /codon_start=1 /product="Regulator of microtubule dynamics protein 1-like Protein" /protein_id="EFA08242.1" /db_xref="BEETLEBASE:TC005870" /translation="MSKLTVRLVNVIKLFSFHHDNLRTLGDRVIKLQFLTLFKAITNF GLPPNGEDKVTKYWTGKSVDEIIAEADLLFDQGKYLQVYELLNRLKFCNNIEVQWRIG RALFKLSHEHEITEDIRREMIDEAYEIIQSSLTVAENSPIIHKWAAIIIDRKNGMKGL EHRVKNSEVVKHHLIRTCELDPDDVTAQYLLGRWCYEMSNITWFQRIIAKLLYGEAPR SSFEEANKYLSRAEDLHPRFYLQNTYLLGKTCLKLGQYYRAKHYFGVVGNLPVHNEYE RHCANDAKKLLKRLDKYSLEKNALFYEYPFGTNE" gene 256876..257869 /locus_tag="TcasGA2_TC006278" /gene_synonym="AUGUSTUS-3.0.2_06278" /db_xref="BEETLEBASE:TC006278" mRNA join(256876..257066,257112..257277,257331..257869) /locus_tag="TcasGA2_TC006278" /gene_synonym="AUGUSTUS-3.0.2_06278" /product="Ribonuclease P protein subunit p20-like Protein" /db_xref="BEETLEBASE:TC006278" CDS join(256935..257066,257112..257277,257331..257428) /locus_tag="TcasGA2_TC006278" /gene_synonym="AUGUSTUS-3.0.2_06278" /codon_start=1 /product="Ribonuclease P protein subunit p20-like Protein" /protein_id="EFA08615.2" /db_xref="BEETLEBASE:TC006278" /translation="MEGPSGAPPRKPKPHSDHILRKRQSQKPQFGKTVIYVNTKTPVK ALLDRCSKLISEGEKEITIYCLGAAIQRGTLLALKVCEENVGFQIHTNTFTTELIDDL EPATDDADYAIQRRFNSALKIKVSKPDLL" gene 262866..265749 /locus_tag="TcasGA2_TC006279" /gene_synonym="AUGUSTUS-3.0.2_06279" /db_xref="BEETLEBASE:TC006279" mRNA join(262866..263258,264174..264369,264417..264696, 264742..265749) /locus_tag="TcasGA2_TC006279" /gene_synonym="AUGUSTUS-3.0.2_06279" /product="hypothetical protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC006279" mRNA join(262866..262997,263055..264127,264174..264369, 264417..264696,264742..265749) /locus_tag="TcasGA2_TC006279" /gene_synonym="AUGUSTUS-3.0.2_06279" /product="hypothetical protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC006279" CDS join(263084..263258,264174..264369,264417..264696, 264742..265017) /locus_tag="TcasGA2_TC006279" /gene_synonym="AUGUSTUS-3.0.2_06279" /note="transcript variant 1" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08616.2" /db_xref="BEETLEBASE:TC006279" /translation="MSGSKSQGTPEVLMQLDKNELQSIKVKITRRNVNKPYNTALLQR GLEDPADLKVHLRPDEGVRPIFDREDVRVNLRFSDSPPVNPPKPGNDKARSRSPARHR SPQPHTSRDYPRRRDYHSPRHRRSSSRSKKVVYKTSPPRYRRSRSPRRSRDRSPRDRY RRRTRSPSPYRRSRYSRSPDYRRYDRRSRSPKRHRYTPERDRHEIAYQPAGIPPYLQG PEMWIPAPRIPPMIPPMAFPYPPLRHPMMYRGPPFRPRIIYNNPRPRVTQAIASATVT TTTTTATPEVTECESEGQNDNNVTEETTDENK" CDS join(264103..264127,264174..264369,264417..264696, 264742..265017) /locus_tag="TcasGA2_TC006279" /gene_synonym="AUGUSTUS-3.0.2_06279" /note="transcript variant 2" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25988.1" /db_xref="BEETLEBASE:TC006279" /translation="MSIIVNLIHEGVRPIFDREDVRVNLRFSDSPPVNPPKPGNDKAR SRSPARHRSPQPHTSRDYPRRRDYHSPRHRRSSSRSKKVVYKTSPPRYRRSRSPRRSR DRSPRDRYRRRTRSPSPYRRSRYSRSPDYRRYDRRSRSPKRHRYTPERDRHEIAYQPA GIPPYLQGPEMWIPAPRIPPMIPPMAFPYPPLRHPMMYRGPPFRPRIIYNNPRPRVTQ AIASATVTTTTTTATPEVTECESEGQNDNNVTEETTDENK" gene complement(266131..267486) /locus_tag="TcasGA2_TC005869" /gene_synonym="AUGUSTUS-3.0.2_05869" /db_xref="BEETLEBASE:TC005869" mRNA complement(join(266131..267057,267106..267292, 267366..267486)) /locus_tag="TcasGA2_TC005869" /gene_synonym="AUGUSTUS-3.0.2_05869" /product="26S proteasome non-ATPase regulatory subunit 14-like Protein" /db_xref="BEETLEBASE:TC005869" CDS complement(join(266300..267057,267106..267283)) /locus_tag="TcasGA2_TC005869" /gene_synonym="AUGUSTUS-3.0.2_05869" /codon_start=1 /product="26S proteasome non-ATPase regulatory subunit 14-like Protein" /protein_id="EFA08241.1" /db_xref="BEETLEBASE:TC005869" /translation="MDRLLRLGGGMPGLSQAPPPSDAPVVDTAEQVYISSLALLKMLK HGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLRQ TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDA FRLINPNMMVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKML LNLHKKSWMDGLILADYKNNCGINEKTVADVLELAKNYNKALEEEEKMTPEQLAIKNV GKQDPKRHLEEKVDLLMTNNIVQCLGAMLDTVAFK" gene 267386..267902 /locus_tag="TcasGA2_TC006280" /gene_synonym="GLEAN_06280" /db_xref="BEETLEBASE:TC006280" mRNA join(267386..267452,267589..267902) /locus_tag="TcasGA2_TC006280" /gene_synonym="GLEAN_06280" /product="COX assembly mitochondrial protein homolog-like Protein" /db_xref="BEETLEBASE:TC006280" CDS join(267386..267452,267589..267902) /locus_tag="TcasGA2_TC006280" /gene_synonym="GLEAN_06280" /codon_start=1 /product="COX assembly mitochondrial protein homolog-like Protein" /protein_id="EFA08617.1" /db_xref="BEETLEBASE:TC006280" /translation="MANDAQKKNLLHEKYASGPHGLGDPNDRTLRRVEIDVMIPKKMR EIARDEKCTDAVEKFTECCKNNNILMTFMCRKENAALKECLTRWYEDEDFKNRCKEEY LNERSEYRRTGVTQKQKQRMATSM" gene complement(267577..269694) /locus_tag="TcasGA2_TC005868" /gene_synonym="AUGUSTUS-3.0.2_05868" /db_xref="BEETLEBASE:TC005868" mRNA complement(join(267577..268062,268909..269066, 269120..269694)) /locus_tag="TcasGA2_TC005868" /gene_synonym="AUGUSTUS-3.0.2_05868" /product="tRNA-splicing endonuclease subunit Sen2-like Protein" /db_xref="BEETLEBASE:TC005868" CDS complement(join(267934..268062,268909..269066, 269120..269678)) /locus_tag="TcasGA2_TC005868" /gene_synonym="AUGUSTUS-3.0.2_05868" /codon_start=1 /product="tRNA-splicing endonuclease subunit Sen2-like Protein" /protein_id="EFA08240.1" /db_xref="BEETLEBASE:TC005868" /translation="MNAPRPKKNCKLRPSPALPLVSHRIRGFFNGFCVTLDDPDDMKT VISMGYFGKANLSRNYPHFGVKQPEIVFKRVYENRKRHANDKPRKIVVLSDDLDDLTN FRPEFRLDSSGLRESVNLGLEEAFFLATAINCLDVYDEVCLSPEQLWEVFKKSDKYFA QNYIAYYYFRAKNWVVKPGIKFGGDFLLYKQGPPFYHASYVVIICVVDGDLKPIKSQN RRSMRKTHLMGLNRLCETARKELLICEIVCPGVSPDSIPFNEIGKFTIKETIMKRWTP QMDQN" gene 269786..280706 /locus_tag="TcasGA2_TC006281" /gene_synonym="AUGUSTUS-3.0.2_06281" /db_xref="BEETLEBASE:TC006281" mRNA join(269786..269960,270193..270274,270324..270513, 275000..275218,275389..275511,279570..280264, 280313..280706) /locus_tag="TcasGA2_TC006281" /gene_synonym="AUGUSTUS-3.0.2_06281" /product="V-type proton ATPase subunit H-like Protein" /db_xref="BEETLEBASE:TC006281" CDS join(269882..269960,270193..270274,270324..270513, 275000..275218,275389..275511,279570..280264, 280313..280511) /locus_tag="TcasGA2_TC006281" /gene_synonym="AUGUSTUS-3.0.2_06281" /codon_start=1 /product="V-type proton ATPase subunit H-like Protein" /protein_id="EFA08618.1" /db_xref="BEETLEBASE:TC006281" /translation="MSSSQVPAGADPKIKEIITSLDDEKIDMLAATSVLQQRATDIRA QKVNWQSYFQSQMISQDDHQFIAAFDVSDSAKREKLLQTDRLQCAQTFLNLLGHVSKD QTLQYILVLIDDMLQEDRSRVEIFHEYANKKKESVWGPFLNLLNRQDGFITNMTSRII AKIACWSQTPMERSDLHFYLTWLKDQLKMQYDDLAVQLAKSDATRGPSGEQATETYTE VSFDEQQTPTEITNNEYIQSVGRCLQMMLRIDEYRFAFVSVDGISTLLSVLSGRVNFQ VQYQLIFCLWVLTFNPLLAEKMNKFNVIPILADILSDSVKEKVTRIILAVFRNLIEKP EDAQVAKEHCIAMVQCKVLKQLNILEQRKFDDEDVAGDVEFLTEKLQNSVQDLSSFDE YATEVKSGRLEWSPVHKSKFWRENAQRLNEKNYELLRILIHLLETSKDPLVLSVASYD IGEYVRHYPRGKHVIEQLGGKQLVMQLLAHEDPNVRYEALLAVQKLMVHNWEYLGKQL EKEQSDKTAPKGGAPVAGKA" gene complement(280720..283884) /locus_tag="TcasGA2_TC005867" /gene_synonym="AUGUSTUS-3.0.2_05867" /db_xref="BEETLEBASE:TC005867" mRNA complement(join(280720..280918,282643..282765, 282813..282942,282994..283699,283752..283884)) /locus_tag="TcasGA2_TC005867" /gene_synonym="AUGUSTUS-3.0.2_05867" /product="GTP-binding protein 128up-like Protein" /db_xref="BEETLEBASE:TC005867" CDS complement(join(280816..280918,282643..282765, 282813..282942,282994..283699,283752..283793)) /locus_tag="TcasGA2_TC005867" /gene_synonym="AUGUSTUS-3.0.2_05867" /codon_start=1 /product="GTP-binding protein 128up-like Protein" /protein_id="EFA08239.1" /db_xref="BEETLEBASE:TC005867" /translation="MSTILEKIAAIEAEMARTQKNKATAGHLGLLKARLAKLRRELIT PKGGGGGTGEGFDVAKTGDARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVP GCIKYKGAKIQLLDLPGIIEGAKDGKGRGRQVIAVARTCSLIFLCLDVLKPLHHKKLI EHELEGFGLRLNKQPPNIYFKKKDKGGINLNCMVPQSELDSDTVKSILSEYKIHNADV TLKYDATSDDLIDVIEGNRIYVPCIYILNKIDQISIEELDIIYKIPHCVPISAHHRWN FDDLLEKMWEYLKLVRIYTKPKGQLPDYNSPVVLHSEHTSIQDFCNKLHRSIAKEFKY ALVWGSSVKHQPQKVGLDHILCDEDVVQIVKKV" gene complement(284373..291404) /locus_tag="TcasGA2_TC034020" /old_locus_tag="TcasGA2_TC005866" /gene_synonym="AUGUSTUS-3.0.2_34020" mRNA complement(join(284373..285890,285937..286136, 286188..286238,286286..286492,286538..286692, 286747..286847,286902..287346,287401..287498, 287551..287735,289476..289618,289672..290079, 291355..291404)) /locus_tag="TcasGA2_TC034020" /old_locus_tag="TcasGA2_TC005866" /gene_synonym="AUGUSTUS-3.0.2_34020" /product="hypothetical protein" CDS complement(join(284429..285890,285937..286136, 286188..286238,286286..286492,286538..286692, 286747..286847,286902..287346,287401..287498, 287551..287735,289476..289618,289672..289885)) /locus_tag="TcasGA2_TC034020" /old_locus_tag="TcasGA2_TC005866" /gene_synonym="AUGUSTUS-3.0.2_34020" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25989.1" /translation="MIGGLEPIESNLHRHLIEHLNAEVVLQTITGLEVALRWLTSTFL YIRAKKNPRHYGLPPSSDPAAVDRRLLEMCQIELNKLIKAGMLTIDQDVLLKATPVGA AMAKYYLAFETMKLFTQINGGEILQQILHLISKCSEFSEMYLRVNDKKCLNLLNKCRN RQTIRFPLNGKIKTLDMKINCIIQAVLGCLDICDHSILSETLKIMRNGERIVKCLIEY LESKEKCFQALLSTIILAKCFHVKLWENSPFVSKQLPGIGNVMSSQLVNAGKTSFQLI SECEAREIELLINKKPPAGNKILEQIQHLPKYEMELQVHSNTQIKLAISLMNAQDLET KCTVNRNSLMYLLVGDSSNNILLYEKYSHSYFIENPDVVRFVDLHEKNLDVIEAHFIS EDWVGIDCTAKYETAQVVRKPEPKTLKKNTEDPTYMQTFIDMYMKCKKNIEPPNPAKK AKIETNEDRNANKIIIHSDISLNNNNTSEEKIVNNSVFRPSPAPEDKIEKIPVLVASR YDLSPSRDKNELNVNNDYQISLKPECEDAKSIVKKFYYTPKKLSHKKEFSWNESEDKP KSTTKITWRSPLTYSPSVKFSPKIGYNRPNENECLSTSRASSSSTNQNIETMSNKTQK SNFANSRTPVKLNSSQQKVVFPLTDKDCANLSMEENSRRNDILEKVGDFASISLFGLV SPTKRQEKFSQIQTPNQYYNQLLSQSEKTESTPKKNKIFEKPKLVENVVKEVCDRSRY FENDSNFCLTPRRNNGARNSENLEYTTTMTESGEKNNTENMNIFEDPFNDSLESALMK FDCGPPSELESDKSNSFDKEGLFENEAKEVRHPFDCREPSPPEMLRKNTNQICRSRFF QPMAEPSHYQNRSDDSFLTQKSHPYPYQSRAPAHMFPISNGRGFETPNDFYKMMCEER PINRHYVDLGQNPYLNISQDFPDRREHYNSQRHLFDGTPRCYPRGHMDDCDGYAYIRR NMDRDYDPFDYRNNPQYYKPVPNIDFYERSQRSFARNRENIPFQDFDLDRSNSYYDES HLPLSYPELPSSQMSRREYYMPSNSFNDVYNNKQLIMQRFLNCVGSDQEKRVNYFP" gene 292016..292467 /locus_tag="TcasGA2_TC034021" /gene_synonym="AUGUSTUS-3.0.2_34021" mRNA join(292016..292127,292180..292467) /locus_tag="TcasGA2_TC034021" /gene_synonym="AUGUSTUS-3.0.2_34021" /product="Pro-resilin-like Protein" CDS join(292050..292127,292180..292386) /locus_tag="TcasGA2_TC034021" /gene_synonym="AUGUSTUS-3.0.2_34021" /codon_start=1 /product="Pro-resilin-like Protein" /protein_id="KYB25990.1" /translation="MKLFVTVCLIASCLAAPQQGYEAPAPYDFNYKVENPPTNTYFGQ NEVGDITGRVTGSYYVYLPDGRLMTVEYVSDQNGYVPRISFTQNGHPVQG" gene complement(292477..295634) /locus_tag="TcasGA2_TC034022" /old_locus_tag="TcasGA2_TC005866" /gene_synonym="AUGUSTUS-3.0.2_34022" mRNA complement(join(292477..292569,292614..292898, 292948..293232,293278..293558,293610..293726, 293773..293888,295518..295634)) /locus_tag="TcasGA2_TC034022" /old_locus_tag="TcasGA2_TC005866" /gene_synonym="AUGUSTUS-3.0.2_34022" /product="Putative U5 small nuclear ribonucleoprotein 200 kDa helicase-like Protein" CDS complement(join(292510..292569,292614..292898, 292948..293232,293278..293558,293610..293726, 293773..293888,295518..295612)) /locus_tag="TcasGA2_TC034022" /old_locus_tag="TcasGA2_TC005866" /gene_synonym="AUGUSTUS-3.0.2_34022" /codon_start=1 /product="Putative U5 small nuclear ribonucleoprotein 200 kDa helicase-like Protein" /protein_id="KYB25991.1" /translation="MFARNSVFGNNFEILRENLRDPARPNFDSEKCLNDLRPVEEIPQ PYQEVFAEYLCFNPIQSKLIDDAFYTDQSIVVSAPTGSGKTAIFELAIVRLLIASESS QKFKIVYICPMKALCEERLVDWNKKFSNFGINPISVTGDSENIDFQSLRNYNLIITTP EKWDCLTRKWRENLDLVEIVKLFMIDEVHLLNEECRGSTLETIVCRMKTIEESVKTHD LNHKIRFIAVSATIANIEDIAEWNNAKSFKFSDDFRPVRLNKIVLGYSEPPKSTPFKF DLALNYKLHSLMMQYSHGKPTLIFCSTRKIVEMTARHIVQHLTIGLKPEQKQRIVEVA STISDAKAKETLIHGVGYHHAGMLPETRRAIENLFRNNELPVLVTTSTLAMGVNLPAH LGLYRNGPFANDRKGRSAPV" gene 295916..296748 /locus_tag="TcasGA2_TC006282" /gene_synonym="AUGUSTUS-3.0.2_06282" /db_xref="BEETLEBASE:TC006282" mRNA join(295916..296090,296155..296261,296312..296561, 296610..296748) /locus_tag="TcasGA2_TC006282" /gene_synonym="AUGUSTUS-3.0.2_06282" /product="Geminin-like Protein" /db_xref="BEETLEBASE:TC006282" CDS join(296052..296090,296155..296261,296312..296561, 296610..296678) /locus_tag="TcasGA2_TC006282" /gene_synonym="AUGUSTUS-3.0.2_06282" /codon_start=1 /product="Geminin-like Protein" /protein_id="EFA08619.1" /db_xref="BEETLEBASE:TC006282" /translation="MKTGIKIDSQEQKENVKNTRKTLKVLQQAATNKENLAGRILGDK EKTSFVRHKILEDKAVQTGESTITAEDLTSEEPSPDYWKRLAEKREQLLNESFEENER LRQAVEALQEENKICKDMLDESRHLVEVLQEMLCDGDADTTEVAEEATEETN" gene 296806..297985 /locus_tag="TcasGA2_TC006283" /gene_synonym="AUGUSTUS-3.0.2_06283" /db_xref="BEETLEBASE:TC006283" mRNA join(296806..296957,297158..297257,297306..297450, 297501..297985) /locus_tag="TcasGA2_TC006283" /gene_synonym="AUGUSTUS-3.0.2_06283" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006283" CDS join(296883..296957,297158..297257,297306..297450, 297501..297648) /locus_tag="TcasGA2_TC006283" /gene_synonym="AUGUSTUS-3.0.2_06283" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08620.1" /db_xref="BEETLEBASE:TC006283" /translation="MNSFNTSAVSESTQNVPLDENPGRSTPAPEQTYFFTGTVERVLA WNRIFKHPCYFEVIAYVLSLQEGELNCHKTILLKDKKGPILQATYYSNYNIDESVIRV GQMLRCVGYMTGVNTLTAVSIRSATSDEVAALKRFCYIGDFTISGLINGENKK" gene 301396..308714 /locus_tag="TcasGA2_TC006284" /gene_synonym="AUGUSTUS-3.0.2_06284" /db_xref="BEETLEBASE:TC006284" mRNA join(301396..301633,301678..302250,302296..302496, 307603..308037,308090..308441,308487..308714) /locus_tag="TcasGA2_TC006284" /gene_synonym="AUGUSTUS-3.0.2_06284" /product="Gamma-glutamyltranspeptidase 1-like Protein" /db_xref="BEETLEBASE:TC006284" CDS join(301623..301633,301678..302250,302296..302496, 307603..308037,308090..308441,308487..308645) /locus_tag="TcasGA2_TC006284" /gene_synonym="AUGUSTUS-3.0.2_06284" /codon_start=1 /product="Gamma-glutamyltranspeptidase 1-like Protein" /protein_id="EFA08621.1" /db_xref="BEETLEBASE:TC006284" /translation="MIISFRKPTVKYFVIALTAAIILAILGTIVYFLVKGESSGKGAV VTNGHTCAHIGAAILAKGGSAVDAAIAALFCEGVSMPQSMGLGGGFLMTVYFAENRTA YSLNAREVAPLAASKDMFDGNSSLSTKGGLAVAVPGELRGYWEAYHRYGGKVAWADLV QPTIDLCESGVLVTEYLEKLYASQLESFKKDPVMAETFIDPSTNRTYKKGQVVKRPRL AKSLELMKSFGADALYDGTLTKGFVEDIRNKGGIITVEDMKNYKVKWQEPIVVQMPNN QTLYTAPLPGSGVILSFIMNLLNNYLDNSQPLSVTNWQRIVESFKFGYGKRTELGDIT DSNFANVTDLVKKLISPDYASEIRQKIHDGTTSQDPSYYGAKTVQPEDHGTAHICVLA PNGDAVSVTSTINLYFGAGFMSESTGIILNNEMDDFSSPNMNNSFNVPPSEANYIEPG KRPLSSMVPSIVVGDGGVELVIGAAGGTKITTSVAQIAVKHLWFGAPIGAAVQEKRIH HQLFPMEIEFENAFNETRDFVEALHKIGHEYTIAEPGSGFSAVTAISRKGGDVATASD VRRTGDEVIV" assembly_gap 306882..307465 /estimated_length=584 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(315557..325204) /locus_tag="TcasGA2_TC005865" /gene_synonym="AUGUSTUS-3.0.2_05865" /db_xref="BEETLEBASE:TC005865" mRNA complement(join(315557..316034,316080..316212, 320291..320971,321021..321160,325112..325204)) /locus_tag="TcasGA2_TC005865" /gene_synonym="AUGUSTUS-3.0.2_05865" /product="Putative inorganic phosphate cotransporter-like Protein" /db_xref="BEETLEBASE:TC005865" CDS complement(join(315631..316034,316080..316212, 320291..320971,321021..321160,325112..325160)) /locus_tag="TcasGA2_TC005865" /gene_synonym="AUGUSTUS-3.0.2_05865" /codon_start=1 /product="Putative inorganic phosphate cotransporter-like Protein" /protein_id="EFA08237.1" /db_xref="BEETLEBASE:TC005865" /translation="MSTNQKLAQNEEIQAPASWYGSRHTQVTLCFLLLAIAYAMRVNL SVAIVAMTDKNTTSNPDIPTYNWDDKSVVLSSFFWGYVVLQVFAGQFGKMYGPRWFLV VAMTVNSIVCMLTPIVADNLGSKGVMGCRVVQGLFQGFIFPSVHNILGKWAPTPERSR MGTFVYSGSSFGTIIAMPITGLISASWLGWPVSFYVFGCFGLLWVGLWLGLGANSPAE HRGISEEERFYIEATLGQQEHKVVPTPWKAIFTSWPMWAIIVANFGQNWGYSTLLTEI PNYMNKIMHFDMQSNSLLSAAPYLALWVLSFVFGPISDHLINRKILSRGSVRKIFNAI GTCGPALALVALGFVPEDQTDLSVALLIVVVGINAAVFCGFQVNHIDLAPNHAGTLMG ITNGSSNIFSIIAPLVVQVVVYDETDKALWRIVFVIAAAWYVASAIFYIFFASGEIQE WNDDVKDERMKSEEEGKG" gene 326174..338798 /locus_tag="TcasGA2_TC006285" /gene_synonym="AUGUSTUS-3.0.2_06285" /db_xref="BEETLEBASE:TC006285" mRNA join(326174..327093,330361..330476,333390..333478, 333668..335202,337559..338343,338396..338530, 338587..338798) /locus_tag="TcasGA2_TC006285" /gene_synonym="AUGUSTUS-3.0.2_06285" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006285" CDS join(330393..330476,333390..333478,333668..335202, 337559..338343,338396..338530,338587..338637) /locus_tag="TcasGA2_TC006285" /gene_synonym="AUGUSTUS-3.0.2_06285" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08622.1" /db_xref="BEETLEBASE:TC006285" /translation="MNWVTHCSTDSADYQVFNLKGSSIKLAKWQTEPFTERVLQQLND EPKVILSSVKNNKRNVQRTDHNVPDLCDIGNYVECSTHEDIIYTSEKCVKLPDDGGFF FDIEEKTDNAKKHDVEKELSIMFQNVTTEEETAIKKPSHRRRQHKPKKTKNLRELLIQ LFGSPLDDIEKPPKTPQKVQNNRRQSLPVSIQIAGADFFKPVKINNKRKSEADIPSCK KVQKTVQVPVLEVFNVDYLSVAELKIPPIYSETATSSVTLEELKVATVLYKPRLSKTQ TVTNTHIIDLTQDSSNSFSSTDIPVEIKGEQANVGLSMPSLSPLEEGAKSRPETTSVQ PPKTVEKMVATTQRRQSVDNVQSQPNTRIQINRQQSAPQLQQAERPIRAQQTALEQLM EWRKNQIQPPSQPHWISNEHNMPQLLRIHQNTPSGYLLISNRVCGEKIFPYVYKYYVW KQKLVQLMDLKKSLFSADEVKENLETLASYYEATRRNIAKRLIKELLPLEIFNFVLSD VLSTISTKMVEKQLDGGLCRVCCLIHNIMQGFEDACITPFTKRFYSVVSASMGRLDER SRHVFTSQQLKLLELQITQFHLIQCWINARAHAANQRPKSPKTNKRKTTVIQSNPAKR NERTIVPRILVHSKENVQSTLTPKPPELPPYRSYNQGPLVNVSRPQETNNVTFRMPQE TSIFAFSRPQIPILPRPPPPQQVAETQQTNIVPRTPETNVSTSFTRPQELTLRSLLNS QARPQEANTEQGWSKVPERVPTVQSTETKEPQTAEATAEEARKDSDDVIDLTWIDDAD EKAIYDEIIECKVFEFKDEFKNDNNAGETSDREVVSPADSGLGSPVEQTDDGFKCLCG NRAIYVCACKSSMYCSQECQVNDWTYHQKMCNKTKS" gene complement(340996..354124) /locus_tag="TcasGA2_TC005864" /gene_synonym="AUGUSTUS-3.0.2_05864" /db_xref="BEETLEBASE:TC005864" mRNA complement(join(340996..341159,342396..342782, 342829..343217,343263..343516,348000..348208, 348255..348564,348605..348797,354021..354124)) /locus_tag="TcasGA2_TC005864" /gene_synonym="AUGUSTUS-3.0.2_05864" /product="hypothetical protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC005864" mRNA complement(join(340996..341353,342377..342782, 342829..343217,343263..343516,348000..348208, 348255..348564,348605..348797,354021..354124)) /locus_tag="TcasGA2_TC005864" /gene_synonym="AUGUSTUS-3.0.2_05864" /product="hypothetical protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC005864" CDS complement(join(341129..341159,342396..342782, 342829..343217,343263..343516,348000..348208, 348255..348564,348605..348731)) /locus_tag="TcasGA2_TC005864" /gene_synonym="AUGUSTUS-3.0.2_05864" /note="transcript variant 1" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08236.2" /db_xref="BEETLEBASE:TC005864" /translation="MPAHNSWTSMMSGKPDLTIKSSVIEHQIQSVFARDSVGTQFHGR PKSTYSIRRFFRKSHKQLRAVQIESLKNQLIECCLTHIQDSYRVHLNRLKGLKILETF IHLVHISKISSELATHMVWACLSCIHHFLLRLKSEGGLMQWLRRKQARKSIRVFDNLM TFLIPFYYPVVFSAVITFFEEANIWDIEYFCSNLLERLFLVVDEKRKTDSMMEIISLI ENSTLTNALTSRQILQVLFDIEQSLKWDLMNDRLLEKFLDMYYSSLTPEDNHEYNYES LEKGLETCLRAMCANFGEKYLMLMIRWMLDMTTSEKISDENLLNFGSLLEHVTTLYTS KSLNRNLPEQVFPFIFKLIASKNLLYSLLGNRVLHNLIDRCHNKLKFDAPRIFFRNSH YNIVLNHYNSTDKLLFQRYRELLHKTFVESVIRHGVHKIHLENIYISVVLFLVEIPCG YTAAAAVCLAMSIQEAALESKSIQMTHAHRLHAAVVSIMSLVCYIHKASVFYDYVDSI IDKRANFAPHLNPPLKIKYKYAQHHVLWNKPDLFFEDWETRYGLWRCFKNRHKDIVVV HT" CDS complement(join(341129..341353,342377..342782, 342829..343217,343263..343516,348000..348208, 348255..348564,348605..348731)) /locus_tag="TcasGA2_TC005864" /gene_synonym="AUGUSTUS-3.0.2_05864" /note="transcript variant 2" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25992.1" /db_xref="BEETLEBASE:TC005864" /translation="MPAHNSWTSMMSGKPDLTIKSSVIEHQIQSVFARDSVGTQFHGR PKSTYSIRRFFRKSHKQLRAVQIESLKNQLIECCLTHIQDSYRVHLNRLKGLKILETF IHLVHISKISSELATHMVWACLSCIHHFLLRLKSEGGLMQWLRRKQARKSIRVFDNLM TFLIPFYYPVVFSAVITFFEEANIWDIEYFCSNLLERLFLVVDEKRKTDSMMEIISLI ENSTLTNALTSRQILQVLFDIEQSLKWDLMNDRLLEKFLDMYYSSLTPEDNHEYNYES LEKGLETCLRAMCANFGEKYLMLMIRWMLDMTTSEKISDENLLNFGSLLEHVTTLYTS KSLNRNLPEQVFPFIFKLIASKNLLYSLLGNRVLHNLIDRCHNKLKFDAPRIFFRNSH YNIVLNHYNSTDKLLFQRYRELLHKTFVESVIRHGVHKIHLENIYISVVLFLVEIPCG YTAAAAVCLAMSIQEAALESKSIQMTHAHRLHAAVVSIMSLVCYIHKASVFYDYVDSI IDKRANFAPHLNPPLKIKYKYAQHHVLWNKPDLFFEDWETRYGLWRCFKNRHKDIVVR HKASVFYDCVDSIIDKRANFAPHLNPPLKIKYKYAQHHVLWNKPDLFFEDWETRYGLW RCFKNRHKDIVVVHT" gene complement(354726..362936) /locus_tag="TcasGA2_TC005863" /gene_synonym="AUGUSTUS-3.0.2_05863" /db_xref="BEETLEBASE:TC005863" mRNA complement(join(354726..354917,354964..356114, 362653..362936)) /locus_tag="TcasGA2_TC005863" /gene_synonym="AUGUSTUS-3.0.2_05863" /product="hypothetical protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC005863" mRNA complement(join(354726..354917,354964..356114, 362378..362434,362653..362936)) /locus_tag="TcasGA2_TC005863" /gene_synonym="AUGUSTUS-3.0.2_05863" /product="hypothetical protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC005863" CDS complement(join(354787..354917,354964..356114, 362378..362382)) /locus_tag="TcasGA2_TC005863" /gene_synonym="AUGUSTUS-3.0.2_05863" /note="transcript variant 2" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25993.1" /db_xref="BEETLEBASE:TC005863" /translation="MSKVTDPLLLDIEKFMKEKGNLPKPSAESSKDKSYVQTTQEEKQ EQKNSIRVKINLKDCFNQTPKMRPPNECDHSNDLPSRKHKLDPENKKKHSKKHYKIRI CKGVINYMNDQYAAKTTYPRRRRPKIRFYPPSCLNRAVVRRVQCRNDCTTIKTAITIK EEVIDLTSDESTCFMQVKFGVQNEFNFSEIECYLFEPSEVVPSFGAILSELKQAQVYI PDVRFDTTFNFIDLTCDSEEIEDLAISSEKECANRILHIIYQYHKLHHVQLSVENTLS QLQHPCPDDNLTFQFLSQRASLLGCSLAQILSKTYVRNFDIQRFVDILVHKFEETYQR SIENELVLSYLCTMLGTSQAFCAGGTGMKILNLLQVRTKEEPVKGEEEECQVVFTTEQ LDQLQLQIFKYHEIVARQELLEGGDPFERCESKVML" CDS complement(join(354787..354917,354964..356074)) /locus_tag="TcasGA2_TC005863" /gene_synonym="AUGUSTUS-3.0.2_05863" /note="transcript variant 1" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08235.2" /db_xref="BEETLEBASE:TC005863" /translation="MKEKGNLPKPSAESSKDKSYVQTTQEEKQEQKNSIRVKINLKDC FNQTPKMRPPNECDHSNDLPSRKHKLDPENKKKHSKKHYKIRICKGVINYMNDQYAAK TTYPRRRRPKIRFYPPSCLNRAVVRRVQCRNDCTTIKTAITIKEEVIDLTSDESTCFM QVKFGVQNEFNFSEIECYLFEPSEVVPSFGAILSELKQAQVYIPDVRFDTTFNFIDLT CDSEEIEDLAISSEKECANRILHIIYQYHKLHHVQLSVENTLSQLQHPCPDDNLTFQF LSQRASLLGCSLAQILSKTYVRNFDIQRFVDILVHKFEETYQRSIENELVLSYLCTML GTSQAFCAGGTGMKILNLLQVRTKEEPVKGEEEECQVVFTTEQLDQLQLQIFKYHEIV ARQELLEGGDPFERCESKVML" gene 363028..364254 /locus_tag="TcasGA2_TC006286" /gene_synonym="AUGUSTUS-3.0.2_06286" /db_xref="BEETLEBASE:TC006286" mRNA join(363028..363580,363625..364254) /locus_tag="TcasGA2_TC006286" /gene_synonym="AUGUSTUS-3.0.2_06286" /product="UPF0554 protein C2orf43 homolog-like Protein" /db_xref="BEETLEBASE:TC006286" CDS join(363278..363580,363625..364224) /locus_tag="TcasGA2_TC006286" /gene_synonym="AUGUSTUS-3.0.2_06286" /codon_start=1 /product="UPF0554 protein C2orf43 homolog-like Protein" /protein_id="EFA08623.1" /db_xref="BEETLEBASE:TC006286" /translation="MQQAFLELNGVRTNVLTYGKWVEESFKPTEARDIILVIPGNPGL TGFYKMFMHTLNEKTGFPVWIVGHAGHELPKKNSLFSVQPLQGNEGLFGLRGQVEHKL DFIKKYVPEDARLHLVGHSIGSYMILELLKEELVRNKVVDVKLLFPTFEYMAETANGK FLNFIKPIIWLVVFLSWIYTILPSILSNFLMYLYMKIMCIPKMHFRTMVHLIEPSILE KVFFLAYEELQNVRERNDTLIKENCNKIKFLYGHKDGWAPPTYCDNLKKDIPGVNTEM SHFDHSFVLKQSREVGSVVAGWIC" gene 364308..364952 /locus_tag="TcasGA2_TC006287" /gene_synonym="AUGUSTUS-3.0.2_06287" /db_xref="BEETLEBASE:TC006287" mRNA join(364308..364347,364511..364541,364592..364652, 364705..364827,364876..364952) /locus_tag="TcasGA2_TC006287" /gene_synonym="AUGUSTUS-3.0.2_06287" /product="60S ribosomal protein L38-like Protein" /db_xref="BEETLEBASE:TC006287" CDS join(364539..364541,364592..364652,364705..364827, 364876..364901) /locus_tag="TcasGA2_TC006287" /gene_synonym="AUGUSTUS-3.0.2_06287" /codon_start=1 /product="60S ribosomal protein L38-like Protein" /protein_id="EFA08624.1" /db_xref="BEETLEBASE:TC006287" /translation="MPRELHEIKQFLLTARRKDAKSVKIKKNPENTKFKVRCSRFLYT LVITDKEKAEKLKQSLPPGLQVKEVK" gene complement(365509..366256) /locus_tag="TcasGA2_TC034023" /old_locus_tag="TcasGA2_TC005862" /gene_synonym="AUGUSTUS-3.0.2_34023" mRNA complement(join(365509..365755,365800..366025, 366075..366256)) /locus_tag="TcasGA2_TC034023" /old_locus_tag="TcasGA2_TC005862" /gene_synonym="AUGUSTUS-3.0.2_34023" /product="hypothetical protein" CDS complement(join(365572..365755,365800..366025, 366075..366243)) /locus_tag="TcasGA2_TC034023" /old_locus_tag="TcasGA2_TC005862" /gene_synonym="AUGUSTUS-3.0.2_34023" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25994.1" /translation="MKVLQFLNVPLVLATLDLNFAELKYLSDHLLPEECRRLVAAAHF KSYMLPNELWQAEQALPKDESCIDLLLHWNSAVGEGRGDTHETLEHRLRQMGRYDLAD WLGRTVFHQLGEDLERSLTEGLGDLANETTAADNFSMPTLVPFVEYSDPSGDWGPFDT ICLLLVGALIIAIFGICCYTLYLNICGKFKNR" gene complement(368261..369326) /locus_tag="TcasGA2_TC005861" /gene_synonym="AUGUSTUS-3.0.2_05861" /db_xref="BEETLEBASE:TC005861" mRNA complement(join(368261..368424,368471..368788, 368837..369008,369069..369149,369196..369326)) /locus_tag="TcasGA2_TC005861" /gene_synonym="AUGUSTUS-3.0.2_05861" /product="L-xylulose reductase-like Protein" /db_xref="BEETLEBASE:TC005861" CDS complement(join(368313..368424,368471..368788, 368837..369008,369069..369149,369196..369247)) /locus_tag="TcasGA2_TC005861" /gene_synonym="AUGUSTUS-3.0.2_05861" /codon_start=1 /product="L-xylulose reductase-like Protein" /protein_id="EFA08233.1" /db_xref="BEETLEBASE:TC005861" /translation="MEINFKGKRALVTGAGSGIGRALALKLAQCGATVLAIDLSSTAL ETLKQEIPNGEFAAVDISNWEATNTTLRKLLPIDLLVNNAGIAFTDPLESITQEQCDR IFAVNVKALINITKTVISDMVARKSPGAIVNISSQASKAALLNHSLYCATKGAVDAFT RAVALEFGPCNIRINCVNPTVVMTDLGRKIWSDPKMGGPMLAKIPLNRFAEIEDVVDG VLFLLSDKAQMITGSCVPIDGGFLAC" gene complement(372228..393746) /locus_tag="TcasGA2_TC005860" /gene_synonym="AUGUSTUS-3.0.2_05860" /db_xref="BEETLEBASE:TC005860" mRNA complement(join(372228..372984,373041..373293, 373347..373507,392189..393746)) /locus_tag="TcasGA2_TC005860" /gene_synonym="AUGUSTUS-3.0.2_05860" /product="L-xylulose reductase-like Protein" /db_xref="BEETLEBASE:TC005860" CDS complement(join(372555..372984,373041..373293, 373347..373398)) /locus_tag="TcasGA2_TC005860" /gene_synonym="AUGUSTUS-3.0.2_05860" /codon_start=1 /product="L-xylulose reductase-like Protein" /protein_id="EFA08232.1" /db_xref="BEETLEBASE:TC005860" /translation="MEISFTGKRALVTGATKGIGREIAKQLAKCGAQVVAIGRDQTHL NTLKQESPLIETICADLSDWNATTSALSKIGPIDLLVNNAGLGWVKPMTEITEEDVDS VFAINTKGLINVTRIVSKNLLARKAPGSIVNLSSQASLAGLMHHTVYCASKGAVDAFT RAAALELGPHNIRVNCVNPTVIMTDMGRLGWSDPKVAEPMLQKIPLRRFGEVQEVVDV VLFLLSDKASMITGSCLPIDGGFVAC" gene complement(396246..428936) /locus_tag="TcasGA2_TC005859" /gene_synonym="AUGUSTUS-3.0.2_05859" /db_xref="BEETLEBASE:TC005859" mRNA complement(join(396246..398340,402014..402097, 406960..407417,428816..428936)) /locus_tag="TcasGA2_TC005859" /gene_synonym="AUGUSTUS-3.0.2_05859" /product="Rap guanine nucleotide exchange factor-like Protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC005859" CDS complement(join(398190..398340,402014..402097, 406960..407231)) /locus_tag="TcasGA2_TC005859" /gene_synonym="AUGUSTUS-3.0.2_05859" /note="transcript variant 2" /codon_start=1 /product="Rap guanine nucleotide exchange factor-like Protein" /protein_id="KYB25995.1" /db_xref="BEETLEBASE:TC005859" /translation="MREVDAVKLRGFETPRNGTVAPSCGVMTDWDQMFVRSLAKPPAC RSLQDLQVIYYGLSGLEALQTLRDSALRAFCKVVRYEKHQANDVLYYTGELSTCWYIL LSGSVFIDGSMFLPRSRILKKVQSAAGSKRCTFIMLVSSRKNNGSTTNPQNKNYRIFK PQRHTLSA" mRNA complement(join(401800..402097,406960..407417, 428816..428936)) /locus_tag="TcasGA2_TC005859" /gene_synonym="AUGUSTUS-3.0.2_05859" /product="Rap guanine nucleotide exchange factor-like Protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC005859" CDS complement(join(402010..402097,406960..407231)) /locus_tag="TcasGA2_TC005859" /gene_synonym="AUGUSTUS-3.0.2_05859" /note="transcript variant 1" /codon_start=1 /product="Rap guanine nucleotide exchange factor-like Protein" /protein_id="EFA08231.2" /db_xref="BEETLEBASE:TC005859" /translation="MREVDAVKLRGFETPRNGTVAPSCGVMTDWDQMFVRSLAKPPAC RSLQDLQVIYYGLSGLEALQTLRDSALRAFCKVVRYEKHQANDVLYYTGELSTCWYIL LSGSVFIDGSMFLPRSR" gene 408088..430974 /locus_tag="TcasGA2_TC034024" /gene_synonym="AUGUSTUS-3.0.2_34024" mRNA join(408088..408138,408342..408418,430801..430974) /locus_tag="TcasGA2_TC034024" /gene_synonym="AUGUSTUS-3.0.2_34024" /product="hypothetical protein" /note="transcript variant 2" CDS join(408130..408138,408342..408418,430801..430927) /locus_tag="TcasGA2_TC034024" /gene_synonym="AUGUSTUS-3.0.2_34024" /note="transcript variant 2" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25996.1" /translation="MSTHVFFNFSDPLHQDLRRQFPDEYFNKKSNWQILEKLARKPYQ IANNLVHFEARNHLIMKEFVVRSYYK" assembly_gap 412168..412221 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 414354..414926 /estimated_length=573 /gap_type="within scaffold" /linkage_evidence="paired-ends" mRNA 430728..430974 /locus_tag="TcasGA2_TC034024" /gene_synonym="AUGUSTUS-3.0.2_34024" /product="hypothetical protein" /note="transcript variant 1" CDS 430763..430927 /locus_tag="TcasGA2_TC034024" /gene_synonym="AUGUSTUS-3.0.2_34024" /note="transcript variant 1" /codon_start=1 /product="hypothetical protein" /protein_id="KYB25997.1" /translation="MCRSKEHNSFFFRSNWQILEKLARKPYQIANNLVHFEARNHLIM KEFVVRSYYK" gene complement(431709..455126) /locus_tag="TcasGA2_TC005858" /gene_synonym="AUGUSTUS-3.0.2_05858" /db_xref="BEETLEBASE:TC005858" mRNA complement(join(431709..432163,432564..432749, 435182..435366,435418..435527,435582..435734, 439377..439845,439907..439985,443316..443464, 443522..443820,444010..444160,444242..444384, 444446..444496,454998..455126)) /locus_tag="TcasGA2_TC005858" /gene_synonym="AUGUSTUS-3.0.2_05858" /product="Sphingomyelin phosphodiesterase-like Protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC005858" mRNA complement(join(431709..432422,432564..432749, 435182..435366,435418..435527,435582..435734, 439377..439845,439907..439985,443316..443464, 443522..443820,444010..444160,444242..444384, 444446..444496,454998..455126)) /locus_tag="TcasGA2_TC005858" /gene_synonym="AUGUSTUS-3.0.2_05858" /product="Sphingomyelin phosphodiesterase-like Protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC005858" CDS complement(join(432094..432163,432564..432749, 435182..435366,435418..435527,435582..435734, 439377..439845,439907..439985,443316..443464, 443522..443820,444010..444160,444242..444384, 444446..444494)) /locus_tag="TcasGA2_TC005858" /gene_synonym="AUGUSTUS-3.0.2_05858" /note="transcript variant 1" /codon_start=1 /product="Sphingomyelin phosphodiesterase-like Protein" /protein_id="EFA08230.2" /db_xref="BEETLEBASE:TC005858" /translation="MFPVAICIAFLFLQIQAMPTIITAHPPSEERFSDDWDYKIGHDT VPVLQQFQKNHTLPPVANETARLLWELDQEKSTHLPQFVDQALKLLNLKQVAFEIENS VMSKVSCTACKAGAGLLQHYIKTGKSEKEIKKTIYQFCVNLKIQTPRVCEGITELFAG EVIYVLGKVTIGPDEVCSFVIGDACGDVYNPLHEWEVMFPPVPKPAIVEQKIPEINAP TFKVLHLSDTHYDPYYHEGSNADCSEPLCCRLTNGLASTKEQAAGKWGDYRKCDTPKI TVDNMLQHIQETHPDIDYILWTGDLPPHDIWNQTREENLKIIKETVKQMSDMFPGAPI FPALGNHESAPVNSFPPPFIDNPDNSISWLYDELDVQWRKWLPSSVSTTVRRGAFYSV LVRPGFRLISLNTNYCNNKNWWLLLNSTDPATELQWFIYELQSAEFNNEKVHVIGHIP PGHSDCLKVWSRNYYAIVNRYEATITAQFFGHTHFDEFEVFYDHKDLTRANNVAYVGP SVSPYYDLNPGYRIYYVDGDHDKSTRSVIDHESWTMNLREANLYGYPIWFKLYSARQA FGMDALRPSDWDALIDKMTNDPKLFELFYKYYYKASPVRPTCDMSCKKKILCDLHSGR SHDRKNLCQSIESRIDSTANTTWKEWFYNTISVSMSVLWSIPRLTIQLPKYVLGLG" CDS complement(join(432413..432422,432564..432749, 435182..435366,435418..435527,435582..435734, 439377..439845,439907..439985,443316..443464, 443522..443820,444010..444160,444242..444384, 444446..444494)) /locus_tag="TcasGA2_TC005858" /gene_synonym="AUGUSTUS-3.0.2_05858" /note="transcript variant 2" /codon_start=1 /product="Sphingomyelin phosphodiesterase-like Protein" /protein_id="KYB25998.1" /db_xref="BEETLEBASE:TC005858" /translation="MFPVAICIAFLFLQIQAMPTIITAHPPSEERFSDDWDYKIGHDT VPVLQQFQKNHTLPPVANETARLLWELDQEKSTHLPQFVDQALKLLNLKQVAFEIENS VMSKVSCTACKAGAGLLQHYIKTGKSEKEIKKTIYQFCVNLKIQTPRVCEGITELFAG EVIYVLGKVTIGPDEVCSFVIGDACGDVYNPLHEWEVMFPPVPKPAIVEQKIPEINAP TFKVLHLSDTHYDPYYHEGSNADCSEPLCCRLTNGLASTKEQAAGKWGDYRKCDTPKI TVDNMLQHIQETHPDIDYILWTGDLPPHDIWNQTREENLKIIKETVKQMSDMFPGAPI FPALGNHESAPVNSFPPPFIDNPDNSISWLYDELDVQWRKWLPSSVSTTVRRGAFYSV LVRPGFRLISLNTNYCNNKNWWLLLNSTDPATELQWFIYELQSAEFNNEKVHVIGHIP PGHSDCLKVWSRNYYAIVNRYEATITAQFFGHTHFDEFEVFYDHKDLTRANNVAYVGP SVSPYYDLNPGYRIYYVDGDHDKSTRSVIDHESWTMNLREANLYGYPIWFKLYSARQA FGMDALRPSDWDALIDKMTNDPKLFELFYKYYYKASPVRPTCDMSCKKKILCDLHSGR SHDRKNLCQSIESRIDSTANTTWKEWFYNTISVSVV" assembly_gap 441707..441769 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 445690..445772 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(455232..480166) /locus_tag="TcasGA2_TC005857" /gene_synonym="AUGUSTUS-3.0.2_05857" /note="argonaute 1" /db_xref="BEETLEBASE:TC005857" mRNA complement(join(455232..456426,459185..459384, 459533..460218,460274..460458,462641..462774, 463026..463218,463289..463519,465890..466112, 466162..466606,466659..466894,470226..470300, 476709..476866,479337..480166)) /locus_tag="TcasGA2_TC005857" /gene_synonym="AUGUSTUS-3.0.2_05857" /product="argonaute 1" /note="transcript variant 2" /db_xref="BEETLEBASE:TC005857" mRNA complement(join(455232..456426,459185..459384, 459533..460218,460274..460458,462641..462774, 463026..463218,463289..463519,465890..466112, 466162..466606,466659..466894,470226..470300, 474133..474246)) /locus_tag="TcasGA2_TC005857" /gene_synonym="AUGUSTUS-3.0.2_05857" /product="argonaute 1" /note="transcript variant 1" /db_xref="BEETLEBASE:TC005857" mRNA complement(join(455232..456426,459185..459384, 459533..460218,460274..460458,462641..462774, 463026..463218,463289..463519,465890..466112, 466162..466606,466659..466894,470226..470300, 470408..470440,474133..474246)) /locus_tag="TcasGA2_TC005857" /gene_synonym="AUGUSTUS-3.0.2_05857" /product="argonaute 1" /note="transcript variant 3" /db_xref="BEETLEBASE:TC005857" CDS complement(join(456318..456426,459185..459384, 459533..460218,460274..460458,462641..462774, 463026..463218,463289..463519,465890..466112, 466162..466606,466659..466894,470226..470300, 476709..476859)) /locus_tag="TcasGA2_TC005857" /gene_synonym="AUGUSTUS-3.0.2_05857" /note="accepted with validation; transcript variant 2" /codon_start=1 /product="argonaute 1" /protein_id="KYB25999.1" /db_xref="BEETLEBASE:TC005857" /translation="MSAGTELKNMQPGIPQLLPDLTTLSLIGHRSQVNNHLSHHATMQ QQQQPNESWQTSPPHQSASPPPQTAFADPLSATAPGTASTAVAVVGATSTALATVPPT TDPPVFQCPRRPNLGREGRPIGLKANHFQVTMPRGFVHHYDVSIQPDKCPRKVNREII ETMVHAYGKIFGNLKPVFDGRNNLYTRDPLPIGNSREELEVTLPGEGKDRLFRVTIKW VAQVSLYGLEEALEGRTRQIPYEAILALDVVMRHLPSMSYTPVGRSFFSSPEGYYHPL GGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRDINEQRKPL TDSQRVKFTKEIKGLKIEITHCGTMRRKYRVCNVTRRPAQMQSFPLQLDNGQTVECTV AKYFLDKYKMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKKLTDMQTSTMIK ATARSAPDREREINNLVRRADFNNDPYVQEFGLTISNNMMEVRGRVLPPPKLQYGGRV ASLSGQVGWHSKQQAMPNQGVWDMRGKQFFTGVEIRVWAIACFAPQRTVREDALRNFT QQLQKISNDAGMPIIGQPCFCKYATGPDQVEPMFRYLKSTFQSLQLVVVVLPGKTPVY AEVKRVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLGGINSILVPSIRPKIF NEPVIFLGADVTHPPAGDNKKPSIAAVVGSMDAHPSRYAATVRVQQHRQEIIQELSSM VRELLIMFYKSTGGYKPHRIILYRDGVSEGQFLQLLQHELTAIREACIKLESDYKPGI TFIVVQKRHHTRLFCADKKEQSGKSGNIPAGTTVDVGITHPTEFDFYLCSHQGIQGTS RPSHYHVLWDDSHLDSDELQCLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLV EKEHDSGEGSHQSGSSEDRTPGAMARAITVHADTKKVMYFA" CDS complement(join(456318..456426,459185..459384, 459533..460218,460274..460458,462641..462774, 463026..463218,463289..463519,465890..466112, 466162..466606,466659..466894,470226..470300, 474133..474154)) /locus_tag="TcasGA2_TC005857" /gene_synonym="AUGUSTUS-3.0.2_05857" /note="accepted with validation; transcript variant 1" /codon_start=1 /product="argonaute 1" /protein_id="EFA09197.2" /db_xref="BEETLEBASE:TC005857" /translation="MYPGPGGQSWQTSPPHQSASPPPQTAFADPLSATAPGTASTAVA VVGATSTALATVPPTTDPPVFQCPRRPNLGREGRPIGLKANHFQVTMPRGFVHHYDVS IQPDKCPRKVNREIIETMVHAYGKIFGNLKPVFDGRNNLYTRDPLPIGNSREELEVTL PGEGKDRLFRVTIKWVAQVSLYGLEEALEGRTRQIPYEAILALDVVMRHLPSMSYTPV GRSFFSSPEGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMC EVLDIRDINEQRKPLTDSQRVKFTKEIKGLKIEITHCGTMRRKYRVCNVTRRPAQMQS FPLQLDNGQTVECTVAKYFLDKYKMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQR CIKKLTDMQTSTMIKATARSAPDREREINNLVRRADFNNDPYVQEFGLTISNNMMEVR GRVLPPPKLQYGGRVASLSGQVGWHSKQQAMPNQGVWDMRGKQFFTGVEIRVWAIACF APQRTVREDALRNFTQQLQKISNDAGMPIIGQPCFCKYATGPDQVEPMFRYLKSTFQS LQLVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLG GINSILVPSIRPKIFNEPVIFLGADVTHPPAGDNKKPSIAAVVGSMDAHPSRYAATVR VQQHRQEIIQELSSMVRELLIMFYKSTGGYKPHRIILYRDGVSEGQFLQLLQHELTAI REACIKLESDYKPGITFIVVQKRHHTRLFCADKKEQSGKSGNIPAGTTVDVGITHPTE FDFYLCSHQGIQGTSRPSHYHVLWDDSHLDSDELQCLTYQLCHTYVRCTRSVSIPAPA YYAHLVAFRARYHLVEKEHDSGEGSHQSGSSEDRTPGAMARAITVHADTKKVMYFA" CDS complement(join(456318..456426,459185..459384, 459533..460218,460274..460458,462641..462774, 463026..463218,463289..463519,465890..466112, 466162..466606,466659..466894,470226..470300, 470408..470426)) /locus_tag="TcasGA2_TC005857" /gene_synonym="AUGUSTUS-3.0.2_05857" /note="accepted with validation; transcript variant 3" /codon_start=1 /product="argonaute 1" /protein_id="KYB26000.1" /db_xref="BEETLEBASE:TC005857" /translation="MSLIQLESWQTSPPHQSASPPPQTAFADPLSATAPGTASTAVAV VGATSTALATVPPTTDPPVFQCPRRPNLGREGRPIGLKANHFQVTMPRGFVHHYDVSI QPDKCPRKVNREIIETMVHAYGKIFGNLKPVFDGRNNLYTRDPLPIGNSREELEVTLP GEGKDRLFRVTIKWVAQVSLYGLEEALEGRTRQIPYEAILALDVVMRHLPSMSYTPVG RSFFSSPEGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMCE VLDIRDINEQRKPLTDSQRVKFTKEIKGLKIEITHCGTMRRKYRVCNVTRRPAQMQSF PLQLDNGQTVECTVAKYFLDKYKMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRC IKKLTDMQTSTMIKATARSAPDREREINNLVRRADFNNDPYVQEFGLTISNNMMEVRG RVLPPPKLQYGGRVASLSGQVGWHSKQQAMPNQGVWDMRGKQFFTGVEIRVWAIACFA PQRTVREDALRNFTQQLQKISNDAGMPIIGQPCFCKYATGPDQVEPMFRYLKSTFQSL QLVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLGG INSILVPSIRPKIFNEPVIFLGADVTHPPAGDNKKPSIAAVVGSMDAHPSRYAATVRV QQHRQEIIQELSSMVRELLIMFYKSTGGYKPHRIILYRDGVSEGQFLQLLQHELTAIR EACIKLESDYKPGITFIVVQKRHHTRLFCADKKEQSGKSGNIPAGTTVDVGITHPTEF DFYLCSHQGIQGTSRPSHYHVLWDDSHLDSDELQCLTYQLCHTYVRCTRSVSIPAPAY YAHLVAFRARYHLVEKEHDSGEGSHQSGSSEDRTPGAMARAITVHADTKKVMYFA" gene complement(483256..483946) /locus_tag="TcasGA2_TC034025" /old_locus_tag="TcasGA2_TC005856" /gene_synonym="AUGUSTUS-3.0.2_34025" mRNA complement(join(483256..483545,483614..483706, 483760..483946)) /locus_tag="TcasGA2_TC034025" /old_locus_tag="TcasGA2_TC005856" /gene_synonym="AUGUSTUS-3.0.2_34025" /product="DNA-directed RNA polymerases I, II, and III subunit RPABC4-like Protein" CDS complement(join(483523..483545,483614..483706, 483760..483823)) /locus_tag="TcasGA2_TC034025" /old_locus_tag="TcasGA2_TC005856" /gene_synonym="AUGUSTUS-3.0.2_34025" /codon_start=1 /product="DNA-directed RNA polymerases I, II, and III subunit RPABC4-like Protein" /protein_id="KYB26001.1" /translation="MSEPSTKDSGATKTPMVYICGECHNENEIRPRDPIRCRECGYRI MYKKRTKRLAVFDAR" gene complement(484001..512416) /locus_tag="TcasGA2_TC005855" /gene_synonym="AUGUSTUS-3.0.2_05855" /db_xref="BEETLEBASE:TC005855" mRNA complement(join(484001..484359,484413..484635, 484700..484924,485252..485504,485553..485698, 487290..487449,487863..488043,489877..490163, 490251..490359,495751..495908,508168..508276, 508414..508624,510066..510336,511998..512069, 512116..512238,512309..512416)) /locus_tag="TcasGA2_TC005855" /gene_synonym="AUGUSTUS-3.0.2_05855" /product="6-phosphofructokinase-like Protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC005855" mRNA complement(join(484001..484359,484413..484635, 484700..484924,485252..485504,485553..485698, 487290..487449,487863..488043,489877..490163, 490251..490359,502240..502397,508168..508276, 508414..508624,510066..510336,511998..512069, 512116..512238,512309..512416)) /locus_tag="TcasGA2_TC005855" /gene_synonym="AUGUSTUS-3.0.2_05855" /product="6-phosphofructokinase-like Protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC005855" CDS complement(join(484230..484359,484413..484635, 484700..484924,485252..485504,485553..485698, 487290..487449,487863..488043,489877..490163, 490251..490359,495751..495908,508168..508276, 508414..508624,510066..510336,511998..512069, 512116..512205)) /locus_tag="TcasGA2_TC005855" /gene_synonym="AUGUSTUS-3.0.2_05855" /note="transcript variant 1" /codon_start=1 /product="6-phosphofructokinase-like Protein" /protein_id="EFA08228.2" /db_xref="BEETLEBASE:TC005855" /translation="MEGKAGHKFVGRGAHKGKGIAVFTSGGDSQGMNAAVRAVVRMGI YLGCKVYFIKEGYQGMVDGGKYIVEANWSSVSSIIHKGGTVIGSARCQDFRERAGRLK AAKNLVENGITNLVVIGGDGSLTGADLFRQEWSSLLEELATTGQITKEQQQKYRTLQI AGLVGSIDNDFCGTDMTIGTDSALHRIIEACDAIVSTAYSHQRTFIMEVMGRHCGYLA LVAALTSEADYVFIPESPPPDDWQKRLCDKLEQSTKDRNEGKLFKSCLGKPPMIMMND FNWLLSSFFFQGAPPRPLAWNPTLRQDCYLALISALATEADYAFIPENPADVNWHEKL CHKLSQERHMGQRLNIIIVAEGAIDRNGDPITAEMIKKVVVDNLQQDTRITVLGHVQR GGNPSAFDRILGCRMGAEAVMALMEADENTEPCVISLDGNQAIRLPLMDCVKRTKAVS QAMADKKFDLAVELRGKSFMRNLETYKLLTRLKPPKDAFDEQGHGREGFTVAVMHIGA PACGMNAAVRSFVRNFIYRGDTVLGIQEGVEGLIAGNIKQMDWAEVAGWVGIGGANLG TKRTLPGNRMGLVAARLAEFKIQGLLIIGGFEAFAAAVQFLDSRKDFPALNIPIVVIP GTISNNVPGTEFSLGCDTALNEITEICDRIRQSAQGTKRRVFIIETMGGYCGYLATLA GLAGGADAAYIYEEKFTIKDLQQDVYHMATKMSEGVQRGLILRNEKASDNYNTDFIYR LYCEEGKGLFSARMNVLGHMQQGGSPTPFDRNVGTKMASKAVEWMINQLKSNMSSDGS VSCSSQDSVVLLGIVKRQYKFTPVAELKEQTNFDLRMPKEQWWLKLRPLLRILAKHDS TYEEEGMYMTIEDRSFIN" CDS complement(join(484230..484359,484413..484635, 484700..484924,485252..485504,485553..485698, 487290..487449,487863..488043,489877..490163, 490251..490359,502240..502397,508168..508276, 508414..508624,510066..510336,511998..512069, 512116..512205)) /locus_tag="TcasGA2_TC005855" /gene_synonym="AUGUSTUS-3.0.2_05855" /note="transcript variant 2" /codon_start=1 /product="6-phosphofructokinase-like Protein" /protein_id="KYB26002.1" /db_xref="BEETLEBASE:TC005855" /translation="MEGKAGHKFVGRGAHKGKGIAVFTSGGDSQGMNAAVRAVVRMGI YLGCKVYFIKEGYQGMVDGGKYIVEANWSSVSSIIHKGGTVIGSARCQDFRERAGRLK AAKNLVENGITNLVVIGGDGSLTGADLFRQEWSSLLEELATTGQITKEQQQKYRTLQI AGLVGSIDNDFCGTDMTIGTDSALHRIIEACDAIVSTAYSHQRTFIMEVMGRHCGYLA LVAALTSEADYVFIPESPPPDDWQKRLCDKLEQSTKDRNEGKLFKSCLGKPPMIMMND FNWLLSSFFFQGAPPRPLAWNPTLRQDCYLALISALATEADYAFIPENPADVNWHEKL CHKLSQERHMGQRLNIIIVAEGAIDRNGDPITAEMIKKVVVDNLQQDTRITVLGHVQR GGNPSAFDRILGCRMGAEAVMALMEADENTEPCVISLDGNQAIRLPLMDCVKRTKAVS QAMADKKFDLAVELRGKSFMRNLETYKLLTRLKPPKDAFDEQGHGREGFTVAVMHIGA PACGMNAAVRSFVRNFIYRGDTVLGIQEGVEGLIAGNIKQMDWAEVAGWVGIGGANLG TKRTLPGNRMGLVAARLAEFKIQGLLIIGGFEAFAAAVQFLDSRKDFPALNIPIVVIP GTISNNVPGTEFSLGCDTALNEITEICDRIRQSAQGTKRRVFIIETMGGYCGYLATLA GLAGGADAAYIYEEKFTIKDLQQDVYHMATKMSEGVQRGLILRNEKASDNYNTDFIYR LYCEEGKGLFSARMNVLGHMQQGGSPTPFDRNVGTKMASKAVEWMINQLKSNMSSDGS VSCSSQDSVVLLGIVKRQYKFTPVAELKEQTNFDLRMPKEQWWLKLRPLLRILAKHDS TYEEEGMYMTIEDRSFIN" assembly_gap 490607..491654 /estimated_length=1048 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 494734..494734 /estimated_length=1 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 503429..507251 /estimated_length=3823 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 513633..513682 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(514202..534148) /locus_tag="TcasGA2_TC005854" /gene_synonym="AUGUSTUS-3.0.2_05854" /db_xref="BEETLEBASE:TC005854" mRNA complement(join(514202..515665,519565..520361, 524527..524893,525232..525385,525434..525586, 533009..533746,534038..534148)) /locus_tag="TcasGA2_TC005854" /gene_synonym="AUGUSTUS-3.0.2_05854" /product="ER degradation-enhancing alpha-mannosidase-like protein 3" /db_xref="BEETLEBASE:TC005854" CDS complement(join(514406..515665,519565..520361, 524527..524893,525232..525385,525434..525586, 533009..533262)) /locus_tag="TcasGA2_TC005854" /gene_synonym="AUGUSTUS-3.0.2_05854" /codon_start=1 /product="ER degradation-enhancing alpha-mannosidase-like protein 3" /protein_id="EFA08227.2" /db_xref="BEETLEBASE:TC005854" /translation="MSALEVLVRVFFVSALVGFCCPEEAPMTRAERHRLREETRDMFY HAYWAYMENAYPADELMPLSCKGRFRGLTPNRGDIDDCLGNFSLTLIDTLDSLVVLGD LEEFEHAVKLVIKDVSFDNDVVVSVFETNIRVLGGLLSAHILADYLQQRDGIMPWYKG ELLNMAKDVGYRLLPAFNTTTGIPHSRVNMKYGLKSDRLESARETCTACAGSMILEMA ALSRLTGEPIFEEKAHKAMDELWKMRHRSSDLMGTVLNVHSGDWVRRDSGVGAGIDSY YEYCLKAYILLGDNKYLHRFNRHYNAVMKYISQGPMLLDVHMHRPHTNSRNYMDALLA FWPGLQVLKGDLKPAVETHEMLYQVMQRHTFIPEAFTTDFQVHWGNHPLRPEFLESTY FLYGATNDPYYLEVGRTVLNSLQKYARVPCGYAAVNDVRTRKQEDRMDSFVLSETLKY LYLLFADKEDLILNLDEFIFTTEGHLLPLSLAGYNGNKTVSELDVEEGEFARICPNTL QLFPETVRKPLQNMVDGMCPKRNTKRRLTAVEFSASNINHLKMIKDMGINIIALSDGR VQLLHTFSSARSSADAEEGLLFMQEMMELSKLQTQQLDATPQSVTFPIKDQTLTVQAC PSQFGKNLQGDQKITARTIIIHPFRACSDLVQTEAIKGKIAIMERGDCMFVDKARKVQ KHGAVAAIIIDNTPGSSAASSPMFSMSGDGTDDVAIPTVFLFAQDASKLLFALSRDPS IEVTIGEYKNEGEAWAHSEEESMFHKLKVSVQEFLNKHTGIAFSKSVKVGAFRASLGS DKIRITYEEGEEGGKVAGVGDTVTTPQWVQVRRDLLKSIMTSEGKELYVPLNILRIYY QTLSDDPMEDKRVQDTVKQAEWLLNQLSIELANKDALVKPEDGVKVLSVLTDLGQLAG SDLEDKETLKALNSILESVAKDVKFKKEHLGAVMKKLQEADDDLVVSDVKPKETDRDS SEINSSDSEHIQTKISHAVDEL" assembly_gap 531119..531168 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(535757..539848) /locus_tag="TcasGA2_TC005853" /gene_synonym="AUGUSTUS-3.0.2_05853" /db_xref="BEETLEBASE:TC005853" mRNA complement(join(535757..536153,536209..536510, 538911..539195,539243..539848)) /locus_tag="TcasGA2_TC005853" /gene_synonym="AUGUSTUS-3.0.2_05853" /product="Alpha/beta hydrolase domain-containing protein 13-like Protein" /db_xref="BEETLEBASE:TC005853" CDS complement(join(535860..536153,536209..536510, 538911..539195,539243..539402)) /locus_tag="TcasGA2_TC005853" /gene_synonym="AUGUSTUS-3.0.2_05853" /codon_start=1 /product="Alpha/beta hydrolase domain-containing protein 13-like Protein" /protein_id="EFA08226.1" /db_xref="BEETLEBASE:TC005853" /translation="MGGYVQLTRVLGTLLKMILKVWAYSGLVLVFCFLLYYVYGGVFA VVLLFFALTGVLYHVQDNFLFYPELPSHSRVYVPIPSTLGLPYETVQTRGSDGVLIHM YFIHQPKDRQRLSPTIVFFHGNAGNMGHRLQNCRGLYHNLHCNILLVEYRGYGLSEGH PTEEGLYLDAKASLDYILSRSDVNHSEIIVFGRSLGGAVAVDLASREEYASKIWCLVI ENTFTSIPDMAKVLLGWRLLQYFPLFFYKNKFLSYHKMKFLRVPTLFISGMADSLVPP RMMSELYNNCRSVRKQLLQIPDGTHNETWTAQGYYHSLAVFLQNCRIQMEEKGDFSNK IDISGWNNVQNI" assembly_gap 539856..539957 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 540259..541273 /locus_tag="TcasGA2_TC034826" /gene_synonym="AUGUSTUS-3.0.2_34826" mRNA join(540259..540513,540565..541273) /locus_tag="TcasGA2_TC034826" /gene_synonym="AUGUSTUS-3.0.2_34826" /product="Uncharacterized protein C3orf38-like protein" CDS join(540387..540513,540565..541238) /locus_tag="TcasGA2_TC034826" /gene_synonym="AUGUSTUS-3.0.2_34826" /codon_start=1 /product="Uncharacterized protein C3orf38-like protein" /protein_id="KYB26003.1" /translation="MLNDTSRQGICEILASLDDNTLFNLAGTVTQGLLKNRINTRDEA VNAILNYSPDALSFLRRKIITREVLFAYLHAKNVSIDLPATKNDLVQKTAQIWSIQYV QEANNQADSGSISLLAEQFTRWFYAQLNKNECLNHEHFYPNVRLKIVMSNNGQVSTEV IENDPLKVVQGLYALRTNFNLFFNPNLSSEGVQGRVDPHGLVLVLVCGTLHTGATCVG VFEQVFALARDPQTDNNWKIKSSEINLKSESGVRGLPVLANSNLLALT" gene complement(541286..558858) /locus_tag="TcasGA2_TC005852" /gene_synonym="AUGUSTUS-3.0.2_05852" /db_xref="BEETLEBASE:TC005852" mRNA complement(join(541286..541506,541559..541678, 548391..548990,549043..549100,552547..553977, 558250..558858)) /locus_tag="TcasGA2_TC005852" /gene_synonym="AUGUSTUS-3.0.2_05852" /product="Dual oxidase maturation factor 1-like Protein" /db_xref="BEETLEBASE:TC005852" CDS complement(join(541316..541506,541559..541678, 548391..548990,549043..549100,552547..552705)) /locus_tag="TcasGA2_TC005852" /gene_synonym="AUGUSTUS-3.0.2_05852" /codon_start=1 /product="Dual oxidase maturation factor 1-like Protein" /protein_id="EFA08225.1" /db_xref="BEETLEBASE:TC005852" /translation="MWFDLGRSEGFPTQYPPNQTPVTVDVLEAGFIAAFIILLLSLLV LLPTSSLKKTLCLFVEITTLLTIGLLLLLGNFGQEWEVGHILTRTPYKAGSSAEINAS IGLKIGLRSVNVTLKSDQNPPNLAREIINYNERFSWTWDQDRLGFGPFAGHLQQEFRA AQYRGLPTPILWVVEYFVIDGEGFRFGRFYRTAGWYSHVALWCAFACWLVALLLFRSV ILYGGYCLAACGALQLTANLIWLVVRNPIPLVVPFEDGTITTRFGLSYWITFASGILC LVIAIIITLLDTKFHTLLYTFFGVDPLNSYDEVAYLTKNELLLRTKNISNDVPLIPMS NSPKEEEDDSAEYVPVYIKRKTRAFGPPVVRSNKPKHLLEM" assembly_gap 546893..547985 /estimated_length=1093 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 553267..553316 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 557793..558127 /estimated_length=335 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(561194..569160) /locus_tag="TcasGA2_TC034026" /old_locus_tag="TcasGA2_TC005851" /gene_synonym="AUGUSTUS-3.0.2_34026" mRNA complement(join(561194..561780,565094..565508, 568537..568900,568965..569160)) /locus_tag="TcasGA2_TC034026" /old_locus_tag="TcasGA2_TC005851" /gene_synonym="AUGUSTUS-3.0.2_34026" /product="Zinc finger and BTB domain-containing protein 14-like Protein" CDS complement(join(561536..561780,565094..565508, 568537..568896)) /locus_tag="TcasGA2_TC034026" /old_locus_tag="TcasGA2_TC005851" /gene_synonym="AUGUSTUS-3.0.2_34026" /codon_start=1 /product="Zinc finger and BTB domain-containing protein 14-like Protein" /protein_id="KYB26004.1" /translation="MATTEQFSLRWNNFHSNLTAGFHELLESSEMVDVTLAVEGHFFQ AHKVVLSICSPYFKQMFKVNPCKHPIVILKDVAHDNMKDILEFMYMGEVNVLRENLAT FLRTAELLQVKGLTGDDSSETSSRKDDKSESIADNEDDPDLSQFNHLIDSDVELPPYT TPRVPTPPPLNVKRQAKSSIQNSSSKRAKSESLPNKPIKVETEVNTPQNDENDFSESN PTLKPEKSVTELDEAKDNLKQILENNFTSAANTDANLSDQGKPETKCINRHSYQCEKC YKKFSRRDHLRTHEKNIHGEDAGPFVCVICSQLYKNTESLRKHIAKFHFPKMSEVNQK VEVKA" gene complement(569210..654511) /locus_tag="TcasGA2_TC034027" /old_locus_tag="TcasGA2_TC005851" /gene_synonym="AUGUSTUS-3.0.2_34027" mRNA complement(join(569210..569554,571845..572430, 587003..587201,637555..637844,646409..646488, 654284..654511)) /locus_tag="TcasGA2_TC034027" /old_locus_tag="TcasGA2_TC005851" /gene_synonym="AUGUSTUS-3.0.2_34027" /product="hypothetical protein" CDS complement(join(569291..569554,571845..572430, 587003..587201,637555..637844,646409..646455)) /locus_tag="TcasGA2_TC034027" /old_locus_tag="TcasGA2_TC005851" /gene_synonym="AUGUSTUS-3.0.2_34027" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26005.1" /translation="MDQRVNVYDPGIDNRRELIGTASAAGAGSSSSSVFQVPQLNPLC GFLRSTQFCFGRETRRNSNTKPTPSCAYRAVILKCSILTLCRNKTEFLVNVGVAFSVH SDGEEETKLKRRNVPWMWKMLDGSASGMEYSIRDLWSCPAHFWDFFPNFDPGPSPDLQ YMDRIVGEHFSTLYHSIIPLSLESISEYKTKSSFSTSSLYPSRECSSMESSSSDCTDY AVRSTTETNREEKTLMSPGSSYLSWIESVNSEYFGSATTTTAEVSDVDNKVGEWNNFW LNYNSARSRYLSSPYLSTSNEDRTGDELSDAKSTCSTQREFTEKMSLEQVMLTVDEIN EAIKCAQRITEILQNALKRSEHEFDDSKNDSYYSAPYSQHNSVKDEVIVQRERSFSYA MDPQEIQKQKQQLQKNTPQSSSSSCINALLNTGVADILKRVITKRRDVFNPSEFSPVS RASFSDWSSTK" assembly_gap 584888..584937 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 593702..594106 /estimated_length=405 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 605845..646593 /locus_tag="TcasGA2_TC006289" /gene_synonym="GLEAN_06289" /db_xref="BEETLEBASE:TC006289" mRNA join(605845..605971,609024..609165,646374..646593) /locus_tag="TcasGA2_TC006289" /gene_synonym="GLEAN_06289" /product="hypothetical protein" /db_xref="BEETLEBASE:TC006289" CDS join(605845..605971,609024..609165,646374..646593) /locus_tag="TcasGA2_TC006289" /gene_synonym="GLEAN_06289" /codon_start=1 /product="hypothetical protein" /protein_id="EFA08626.1" /db_xref="BEETLEBASE:TC006289" /translation="MEKKGFFRRVLWKNANNFVFKQTRFERFNWICKLTYLRTKRHCY KLTVRLRYFNTVVVIKGIIYVSMATNKMAAEKIAMFTTTKSDLMEIRLGVEFPSCAIP PIIDPRVVNINALVHHDDAAAGLKDELNGKTITDACFTDRSRCLGQALRNAPGYWRNA DF" assembly_gap 609944..609944 /estimated_length=1 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 611083..611819 /estimated_length=737 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 613974..615417 /estimated_length=1444 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 622974..623913 /estimated_length=940 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 626026..627424 /estimated_length=1399 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 629840..629889 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 631471..632155 /estimated_length=685 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 648744..649182 /estimated_length=439 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 658577..683023 /locus_tag="TcasGA2_TC006290" /gene_synonym="AUGUSTUS-3.0.2_06290" /db_xref="BEETLEBASE:TC006290" mRNA join(658577..658720,663420..663495,663565..663655, 671444..671707,677039..677653,682316..682480, 682542..683023) /locus_tag="TcasGA2_TC006290" /gene_synonym="AUGUSTUS-3.0.2_06290" /product="Flotillin-1-like Protein" /db_xref="BEETLEBASE:TC006290" CDS join(658669..658720,663420..663495,663565..663655, 671444..671707,677039..677653,682316..682480, 682542..682559) /locus_tag="TcasGA2_TC006290" /gene_synonym="AUGUSTUS-3.0.2_06290" /codon_start=1 /product="Flotillin-1-like Protein" /protein_id="EFA08627.2" /db_xref="BEETLEBASE:TC006290" /translation="MTWGFVTCGPNEALVISGCCYSKPLLVPGGRAFIWPTIQRIQRI CLNTMTLIVDSPTVYTSQGVPISVTGIAQVKIQGQNEEMLLAACEQFLGKTEEEIQHI ALVTLEGHQRAIMGSMTVEEIYKDRKKFSKQVFEVASSDLVNMGITVVSYTLKDIRDE EGYLKSLGMARTAEVKRDARIGEAEARADAQIKAAIAEEQRMASVFLNDTEIAKAKRD FELKKAAYDVEVQTKNAEAELAYELQAAKTKQKIKEEQMQILVVERTQQIAVQDQEMQ RREKELEATVRRPAEAEKYKLEKLAEADHNRIILEAQAQAEAVRLKGEAEAFAIEAKA KAEAEQMAKKADAFKEYKEAAMIDMFLDVLPKVAAEVAAPISQTKKITMVSTGSGEIG AAKLTGEVLDIVNKVPQLVKNLTGVDIAKNIHAA" assembly_gap 664917..665929 /estimated_length=1013 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 672621..672697 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 674728..675475 /estimated_length=748 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 685953..687765 /locus_tag="TcasGA2_TC034028" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34028" mRNA 685953..687765 /locus_tag="TcasGA2_TC034028" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34028" /product="Sulfhydryl oxidase 1-like Protein" CDS 686011..687681 /locus_tag="TcasGA2_TC034028" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34028" /codon_start=1 /product="Sulfhydryl oxidase 1-like Protein" /protein_id="KYB26006.1" /translation="MLKPLALLLVLAGSQCAPLGDLYLPDDDVEILTIENFKRYVENS TSAWLVEFYASWCGYCQRFAPPWKQFATEAAPWRDLVRVAVLECSDEINTPICRDFGI VKYPTVRYFHENSHFDGGDKGVIVPREFPVTVDAIKKNVIERFMTEMGEGRGVVYPNL LPYLHSDLEPFFDEEDDDIFYGFLVVEDSDSYLGGEVALDLHKTPNVTIRHALNNNTK LVKNLQIGKFPTLVIIDRNNNTQIVTENIEHKKELKATIADYLAKKGLKVCETTPEKK GHLSLDPHPDPKQRSRTLLRQKIKKMGDAVFQMDLETSLRYALLREVSTTKVIKGEQL AALRAFLNVIKKYFPFGYNSTSFINNLTNLTSSDEVQGVQVQVLVQQADDSGVFSTPQ RFLGCQGSANRFRGYPCSLWRLFHYLTVNSVLLNVSNRKANPVEVLGAMHGYVKHFFS CSHCSEHFQKMAAERNLTSVSSLEESVLWLWEAHNVVNKRLKGDTTEDPEYPKEQFPT RLRCPECYGEDGTWRKKEVLKYLKRMYGRYSVRYVGSDTKVLFPGLDR" gene 689833..690751 /locus_tag="TcasGA2_TC034029" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34029" mRNA 689833..690751 /locus_tag="TcasGA2_TC034029" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34029" /product="Sulfhydryl oxidase 1-like Protein" CDS 689856..690623 /locus_tag="TcasGA2_TC034029" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34029" /codon_start=1 /product="Sulfhydryl oxidase 1-like Protein" /protein_id="KYB26007.1" /translation="MGDAVFQMDLETSLRYALLREVSTTKVIKGEQLAALRAFLNVIK KYFPFGYNSTSFINNLTNLTSSDEVQGVQVQVLVQQADDSGVFSTPQRFLGCQGSANR FRGYPCSLWRLFHYLTVNSVLLNVSNRKANPVEVLGAMHGYVKHFFSCSHCSEHFQKM AAERNLTSVSSLEESVLWLWEAHNVVNKRLKGDTTEDPEYPKEQFPTRLRCPECYGED GAWKKKEVLKYLKRMYGRYSVRYVGSDTKVLFPGLDR" gene 691433..693625 /locus_tag="TcasGA2_TC034030" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34030" mRNA join(691433..691570,692368..693625) /locus_tag="TcasGA2_TC034030" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34030" /product="Sulfhydryl oxidase 1-like Protein" CDS join(691549..691570,692368..693542) /locus_tag="TcasGA2_TC034030" /old_locus_tag="TcasGA2_TC006291" /gene_synonym="AUGUSTUS-3.0.2_34030" /codon_start=1 /product="Sulfhydryl oxidase 1-like Protein" /protein_id="KYB26008.1" /translation="MQLVYLQREKRTCFDEENNDIFYGFLVVEDSDNYLGGEVALDLH KTPNVTIRHALNNNTKLVKNLQIGKFPTLVIIDRNNNTQIVTENIEHKKELKATIADY LAKKGLKVCETTPEKKGHLSLDPHPDPKQRSRTLLRQKIKKMGDAVFQMDLETSLRYA LLREVSTTKVIKGEQLAALRAFLSVIKKYFPFGYNSTSFINNLTNLTSSDEVQGVQVQ VLVQQADDSGVFSTPQRFLGCQGSANRFRGYPCSLWRLFHYLTVNSVLLNVSNRKANP VEVLGAMHGYVKHFFSCSHCSEHFQKMAAERNLTSVSSLEESVLWLWEAHNVVNKRLK GDTTEDPEYPKEQFPTRLRCPECYGEDGTWRKKEVLKYLKRMYGRYSVRYVGSDTKVL FPGLDR" gene 697703..698684 /locus_tag="TcasGA2_TC006292" /gene_synonym="AUGUSTUS-3.0.2_06292" /db_xref="BEETLEBASE:TC006292" mRNA 697703..698684 /locus_tag="TcasGA2_TC006292" /gene_synonym="AUGUSTUS-3.0.2_06292" /product="Sulfhydryl oxidase 1-like Protein" /db_xref="BEETLEBASE:TC006292" CDS 697763..698623 /locus_tag="TcasGA2_TC006292" /gene_synonym="AUGUSTUS-3.0.2_06292" /codon_start=1 /product="Sulfhydryl oxidase 1-like Protein" /protein_id="EFA08629.1" /db_xref="BEETLEBASE:TC006292" /translation="MIKALVLLLLPIAYCSLDTVSNDLFSPSDNVEILTGHNFKRLVE KSPTAWLVNFYSNTNVRSKEFSLIWKKLATEAKSWRDLVRVGVVDCSKEINKEICRQS FVLAYPTVKYFHERGSLGKTDFGYHVITSLKFDWLKRNVVNVFQNVISKSPGNGLQLQ YPRGIVPTADPSQQKLFEGVKKNVKYVILVIEDFRQPLGAEMALHFHRTPQVAFKRTV LASGATLKHLLKLPPLPLPHIVITDRRNNVEIISHNINETMSMKWVLHKYLQSKGIKP IVVIPKKLTQ" assembly_gap 699423..700427 /estimated_length=1005 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(AAJJ02003010.1:1..6696,gap(217),AAJJ02003011.1:1..18748, gap(74),AAJJ02003012.1:1..8849,gap(1534),AAJJ02003013.1:1..27266, gap(224),AAJJ02003014.1:1..1189,gap(9670),AAJJ02003015.1:1..5037, gap(112),AAJJ02003016.1:1..44114,gap(681),AAJJ02003017.1:1..3757, gap(399),AAJJ02003018.1:1..33257,gap(153),AAJJ02003019.1:1..3399, gap(991),AAJJ02003020.1:1..10623,gap(50),AAJJ02003021.1:1..9495, gap(50),AAJJ02003022.1:1..11654,gap(18),AAJJ02003023.1:1..108624, gap(584),AAJJ02003024.1:1..104702,gap(54),AAJJ02003025.1:1..2132, gap(573),AAJJ02003026.1:1..26780,gap(63),AAJJ02003027.1:1..3920, gap(83),AAJJ02003028.1:1..44834,gap(1048),AAJJ02003029.1:1..3079, gap(1),AAJJ02003030.1:1..8694,gap(3823),AAJJ02003031.1:1..6381, gap(50),AAJJ02003032.1:1..17436,gap(50),AAJJ02003033.1:1..8687, gap(102),AAJJ02003034.1:1..6935,gap(1093),AAJJ02003035.1:1..5281, gap(50),AAJJ02003036.1:1..4476,gap(335),AAJJ02003037.1:1..26760, gap(50),AAJJ02003038.1:1..8764,gap(405),AAJJ02003039.1:1..15837, gap(1),AAJJ02003040.1:1..1138,gap(737),AAJJ02003041.1:1..2154, gap(1444),AAJJ02003042.1:1..7556,gap(940),AAJJ02003043.1:1..2112, gap(1399),AAJJ02003044.1:1..2415,gap(50),AAJJ02003045.1:1..1581, gap(685),AAJJ02003046.1:1..16588,gap(439),AAJJ02003047.1:1..15734, gap(1013),AAJJ02003048.1:1..6691,gap(77),AAJJ02003049.1:1..2030, gap(748),AAJJ02003050.1:1..23947,gap(1005),AAJJ02003051.1:1..20820) //