LOCUS KQ971347 727196 bp DNA linear CON 10-MAR-2016 DEFINITION Tribolium castaneum strain Georgia GA2 linkage group LG6 genomic scaffold scaffold_seqid42, whole genome shotgun sequence. ACCESSION KQ971347 AAJJ02000000 VERSION KQ971347.1 DBLINK BioProject: PRJNA12540 BioSample: SAMN02953634 KEYWORDS WGS. SOURCE Tribolium castaneum (red flour beetle) ORGANISM Tribolium castaneum Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium. REFERENCE 1 (bases 1 to 727196) AUTHORS Richards,S., Gibbs,R.A., Weinstock,G.M., Brown,S.J., Denell,R., Beeman,R.W., Gibbs,R., Beeman,R.W., Brown,S.J., Bucher,G., Friedrich,M., Grimmelikhuijzen,C.J., Klingler,M., Lorenzen,M., Richards,S., Roth,S., Schroder,R., Tautz,D., Zdobnov,E.M., Muzny,D., Gibbs,R.A., Weinstock,G.M., Attaway,T., Bell,S., Buhay,C.J., Chandrabose,M.N., Chavez,D., Clerk-Blankenburg,K.P., Cree,A., Dao,M., Davis,C., Chacko,J., Dinh,H., Dugan-Rocha,S., Fowler,G., Garner,T.T., Garnes,J., Gnirke,A., Hawes,A., Hernandez,J., Hines,S., Holder,M., Hume,J., Jhangiani,S.N., Joshi,V., Khan,Z.M., Jackson,L., Kovar,C., Kowis,A., Lee,S., Lewis,L.R., Margolis,J., Morgan,M., Nazareth,L.V., Nguyen,N., Okwuonu,G., Parker,D., Richards,S., Ruiz,S.J., Santibanez,J., Savard,J., Scherer,S.E., Schneider,B., Sodergren,E., Tautz,D., Vattahil,S., Villasana,D., White,C.S., Wright,R., Park,Y., Beeman,R.W., Lord,J., Oppert,B., Lorenzen,M., Brown,S., Wang,L., Savard,J., Tautz,D., Richards,S., Weinstock,G., Gibbs,R.A., Liu,Y., Worley,K., Weinstock,G., Elsik,C.G., Reese,J.T., Elhaik,E., Landan,G., Graur,D., Arensburger,P., Atkinson,P., Beeman,R.W., Beidler,J., Brown,S.J., Demuth,J.P., Drury,D.W., Du,Y.Z., Fujiwara,H., Lorenzen,M., Maselli,V., Osanai,M., Park,Y., Robertson,H.M., Tu,Z., Wang,J.J., Wang,S., Richards,S., Song,H., Zhang,L., Sodergren,E., Werner,D., Stanke,M., Morgenstern,B., Solovyev,V., Kosarev,P., Brown,G., Chen,H.C., Ermolaeva,O., Hlavina,W., Kapustin,Y., Kiryutin,B., Kitts,P., Maglott,D., Pruitt,K., Sapojnikov,V., Souvorov,A., Mackey,A.J., Waterhouse,R.M., Wyder,S., Zdobnov,E.M., Zdobnov,E.M., Wyder,S., Kriventseva,E.V., Kadowaki,T., Bork,P., Aranda,M., Bao,R., Beermann,A., Berns,N., Bolognesi,R., Bonneton,F., Bopp,D., Brown,S.J., Bucher,G., Butts,T., Chaumot,A., Denell,R.E., Ferrier,D.E., Friedrich,M., Gordon,C.M., Jindra,M., Klingler,M., Lan,Q., Lattorff,H.M., Laudet,V., von Levetsow,C., Liu,Z., Lutz,R., Lynch,J.A., da Fonseca,R.N., Posnien,N., Reuter,R., Roth,S., Savard,J., Schinko,J.B., Schmitt,C., Schoppmeier,M., Schroder,R., Shippy,T.D., Simonnet,F., Marques-Souza,H., Tautz,D., Tomoyasu,Y., Trauner,J., Van der Zee,M., Vervoort,M., Wittkopp,N., Wimmer,E.A., Yang,X., Jones,A.K., Sattelle,D.B., Ebert,P.R., Nelson,D., Scott,J.G., Beeman,R.W., Muthukrishnan,S., Kramer,K.J., Arakane,Y., Beeman,R.W., Zhu,Q., Hogenkamp,D., Dixit,R., Oppert,B., Jiang,H., Zou,Z., Marshall,J., Elpidina,E., Vinokurov,K., Oppert,C., Zou,Z., Evans,J., Lu,Z., Zhao,P., Sumathipala,N., Altincicek,B., Vilcinskas,A., Williams,M., Hultmark,D., Hetru,C., Jiang,H., Grimmelikhuijzen,C.J., Hauser,F., Cazzamali,G., Williamson,M., Park,Y., Li,B., Tanaka,Y., Predel,R., Neupert,S., Schachtner,J., Verleyen,P., Raible,F., Bork,P., Friedrich,M., Walden,K.K., Robertson,H.M., Angeli,S., Foret,S., Bucher,G., Schuetz,S., Maleszka,R., Wimmer,E.A., Beeman,R.W., Lorenzen,M., Tomoyasu,Y., Miller,S.C., Grossmann,D. and Bucher,G. CONSRTM Tribolium Genome Sequencing Consortium TITLE The genome of the model beetle and pest Tribolium castaneum JOURNAL Nature 452 (7190), 949-955 (2008) PUBMED 18362917 REFERENCE 2 (bases 1 to 727196) AUTHORS Kim,H.S., Murphy,T., Xia,J., Caragea,D., Park,Y., Beeman,R.W., Lorenzen,M.D., Butcher,S., Manak,J.R. and Brown,S.J. TITLE BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum JOURNAL Nucleic Acids Res. 38 (DATABASE ISSUE), D437-D442 (2010) PUBMED 19820115 REFERENCE 3 (bases 1 to 727196) AUTHORS Shelton,J.M., Herndon,N., Coleman,C., Lu,N. and Brown,S.J. TITLE Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool JOURNAL Unpublished REFERENCE 4 (bases 1 to 727196) AUTHORS Liu,Y., Adams,C., Agbai,O. II, Allen,C., Alsbrooks,S., Archer,P., Arredondo,H., Bandaranaike,D., Bangura,L., Beltran,B., Beraducci,A., Biswalo,K., Blyth,P., Buhay,C., Burch,P., Cadoree,I., Canada,A., Cardenas,V., Carter,K., Cavazos,I., Chacko,J., Chahrour,M., Chavez,D., Chen,A., Chen,G., Chen,R., Cheng,M.-T., Chu,J., Clerc,K., Cockrell,R., Coyle,M., Cree,A., Curry,S., Dai,W., Davila,M.L., Davis,C., Davy-Carroll,L., De Anda,C., Delgado,O., Denson,S., Deramo,C., Ding,Y., Dinh,H., Donlin,J., McCauley,S., Dugan-Rocha,S., Dunn,A., Durbin,K., Dziuda,D., Egan,A., Escotto,M., Espinosa,V., Fa,M., Fernandez,S., Fernando,P., Flagg,N., Forbes,L., Fowler,G.J., Fu,Q., Fuh,E., Garcia,A., Garcia,R., Garner,T., Gench,S., Ghose,S., Gill,R., Gonzalez,D., Guevara,W., Holder,M., Haaland,W., Haeberlen,K., Hall,B., Hamid,H., Hamilton,K., Harbes,B., Havlak,P., Hawes,A., Hawkins,E., Hayes,S., Hernandez,J., Hines,S., Hitchens,M., Hogues,M., Hollins,B., Howell,L.T., Hume,J., Imo,K., Jackson,L., Jacob,L., Jiang,H., Johnson,B., Johnson,R., Kelly,S., Keys,T., Khan,Z., King,L., Kovar,C., Kowis,A., Lara,F., Lee,K., Lee,S., LeGall,F.I., Lemon,S., Lewis,L., Li,B., Li,Y., Li,Z., Linnell,M., Liu,W., Liu,Y.-S., Liu,Y., Liyanage,D., London,P., Lopez,J., Lorensuhewa,L., Lozado,R., Madu,R., Maheshwari,M., Mahoney,C., Malloy,K., Mansouri,D., Martinez,E., Mercadao,C., Metzker,M., Minja,E., Morgan,M., Morris,S., Munidasa,M., Nazareth,L., Ngo,D., Nguyen,N., Nott,A., Nwaokelemeh,O., Obregon,M., Ochi-Okorie,C., Odeh,E., Okwuonu,G., Okwuonu,K., Parker,D., Patel,B., Patel,V., Paul,H., Perez,A., Perez,L., Pham,T., Primus,E., Pu,L.-L., Puazo,M., Qin,X., Quinn,A., Quiroz,J., Rabata,D., Rachlin,E., Ren,Y., Rodriguez,F., Rojas,A., Ruiz,S.J., Sana,M., Sanders,W., Santibanez,J., Santos,R., Savery,G., Scherer,S., Shen,H., Shen,Y., Sisson,I., Sodergren,E., Song,X.-Z., Sorelle,R., Svatek,A., Taylor,E., Taylor,T., Thomas,N., Thorn,R., Thornton,R., Trejos,Z., Usmani,K., Vargo,C., Verduzco,D., Villasana,D., Waldron,L., Wang,Q., Wang,S., Warren,J., Wei,X., Wheeler,D., Williams,G., Williams,R., Wright,R., Wu,J., Yakub,S., Yan,K., Yuan,Y., Yu,F., Zhang,J., Zhou,J., Zhang,L., Worley,K.C., Muzny,D., Weinstock,G. and Gibbs,R.A. TITLE Direct Submission JOURNAL Submitted (09-AUG-2005) Human Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA REFERENCE 5 (bases 1 to 727196) AUTHORS Shelton,J.M., Herndon,N., Coleman,C., Lu,N. and Brown,S.J. TITLE Direct Submission JOURNAL Submitted (12-NOV-2014) K-INBRE Bioinformatics Core, Kansas State University, Manhattan, KS 66506, USA COMMENT ##Genome-Assembly-Data-START## Assembly Date :: SEP-2014 Assembly Method :: AllPaths v. 2008; ATLAS-LINK v. 2014; GapFiller v. 2014; stitch v. 2014 Assembly Name :: Tcas5.2 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 7.0x Sequencing Technology :: Sanger; Illumina LDJ ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..727196 /organism="Tribolium castaneum" /mol_type="genomic DNA" /submitter_seqid="scaffold_seqid42" /strain="Georgia GA2" /db_xref="taxon:7070" /geo_loc_name="USA: Kansas" /collection_date="Apr-2003" /note="linkage_group: LG6" gene complement(16742..17092) /locus_tag="TcasGA2_TC002233" /gene_synonym="AUGUSTUS-3.0.2_02233" /db_xref="BEETLEBASE:TC002233" mRNA complement(join(16742..16882,16934..17092)) /locus_tag="TcasGA2_TC002233" /gene_synonym="AUGUSTUS-3.0.2_02233" /product="hypothetical protein" /db_xref="BEETLEBASE:TC002233" CDS complement(join(16874..16882,16934..17047)) /locus_tag="TcasGA2_TC002233" /gene_synonym="AUGUSTUS-3.0.2_02233" /codon_start=1 /product="hypothetical protein" /protein_id="EFA13364.2" /db_xref="BEETLEBASE:TC002233" /translation="MATTTIMGLCPISWKMWPMPSTTTDIIIINNQCQYQHMVS" assembly_gap 20437..20486 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 102883..102896 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 116944..117162 /locus_tag="TcasGA2_TC014991" /gene_synonym="GLEAN_14991" /db_xref="BEETLEBASE:TC014991" mRNA 116944..117162 /locus_tag="TcasGA2_TC014991" /gene_synonym="GLEAN_14991" /product="hypothetical protein" /db_xref="BEETLEBASE:TC014991" CDS 116944..117162 /locus_tag="TcasGA2_TC014991" /gene_synonym="GLEAN_14991" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04925.1" /db_xref="BEETLEBASE:TC014991" /translation="MAEFLAKFGVIYASVSASDAQCRTKVSRDCSKYLNHGRTMAIQT GTGHWTLTANETLPHKGREELRRYMRHV" gene complement(121834..122148) /locus_tag="TcasGA2_TC015694" /gene_synonym="GLEAN_15694" /db_xref="BEETLEBASE:TC015694" mRNA complement(121834..122148) /locus_tag="TcasGA2_TC015694" /gene_synonym="GLEAN_15694" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015694" CDS complement(121834..122148) /locus_tag="TcasGA2_TC015694" /gene_synonym="GLEAN_15694" /codon_start=1 /product="hypothetical protein" /protein_id="EFA05507.1" /db_xref="BEETLEBASE:TC015694" /translation="MGYRQELIADFANRSAACYRYGEFTIRYQLALWPPACDFLRTLA SAINKNADYHRKLLNYSHFLAKIERNDKKSCPRPHGHSNFLDDLLFGRAAIVVDFGLQ LN" assembly_gap 187352..187442 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 189649..189698 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 206860..272637 /locus_tag="TcasGA2_TC014994" /gene_synonym="AUGUSTUS-3.0.2_14994" /db_xref="BEETLEBASE:TC014994" mRNA join(206860..207098,247940..248103,270741..270866, 270912..271166,271217..271587,271639..272479, 272526..272637) /locus_tag="TcasGA2_TC014994" /gene_synonym="AUGUSTUS-3.0.2_14994" /product="Nuclear pore complex protein Nup88-like Protein" /db_xref="BEETLEBASE:TC014994" CDS join(206892..207098,247940..248103,270741..270866, 270912..271166,271217..271587,271639..272479, 272526..272592) /locus_tag="TcasGA2_TC014994" /gene_synonym="AUGUSTUS-3.0.2_14994" /codon_start=1 /product="Nuclear pore complex protein Nup88-like Protein" /protein_id="EFA04928.2" /db_xref="BEETLEBASE:TC014994" /translation="MDSTDYLGLSKIKILKNVREAVPEKLKKSINLLAVKYGVLFTWD FANNCVLTLNIKAARSNDGDNVTHQNLFPVLPVMFQPELLLVNDTGTLLLVAGPSGII VMELPAMHLLYGADSRDVVFCRTHTLDERLLICSDVVQVRQVRFHPGSPRNTHIVALT SDNTLRLYNIENRSAVSVSKVTIGETPIGVFPGTKTSFLAAFGEVGVDFDFGQPEITK SPTNDETQELQWPVFVLRGDGSVYSVTVPLEPKAKWAVKGPLPQNTPEGNPRMEACAI ICLNTNPEVVCIANSNGTILHSIVLPLDHETRELLCFESIELELGLSTTTDDNSYTCP IFLHKDESKSGRFCATHSAGVHLVTVGCVKDLQEYVNGQNEEQALDEIFNCESKAEYL VCTKTSNSEKTNPVIGFSLYYEPTSLIAILADGNLVTLGILTAEVLPQIGDLPREGVK DEATSPLKKMLREPVDVVVERLLKRSSNQPILKLGGDGKHSQKDCHELLQRASKFFRE SFENHTRAREEIEKRAKVLQVMMEFQLKQIQRMNNEKHQVQAKAESLAEKYEDIKDKH DVIMKRCEKMLVLVSQKKAEPSDAEKEYLKELEQYMEKIEKYKKSIEKLKMKMNYQKI QIANWKAQEEKKVPALSETHSLTIKDNLKKTSEKIAEMVKEINEYKERLNLK" assembly_gap 246141..246190 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(276055..280551) /locus_tag="TcasGA2_TC015693" /gene_synonym="AUGUSTUS-3.0.2_15693" /db_xref="BEETLEBASE:TC015693" mRNA complement(join(276055..276569,276618..276785, 276836..276994,280246..280551)) /locus_tag="TcasGA2_TC015693" /gene_synonym="AUGUSTUS-3.0.2_15693" /product="Sarcoplasmic calcium-binding protein-like Protein" /db_xref="BEETLEBASE:TC015693" CDS complement(join(276198..276569,276618..276785, 276836..276994,280246..280320)) /locus_tag="TcasGA2_TC015693" /gene_synonym="AUGUSTUS-3.0.2_15693" /codon_start=1 /product="Sarcoplasmic calcium-binding protein-like Protein" /protein_id="EFA05506.1" /db_xref="BEETLEBASE:TC015693" /translation="MAFSVLRSVVKCTRSVCALKPPKNVANICRCATPLAATIRLHSN LQAPAGVDHAQKIKSKNIYSSSESDSDLEPPGHRGETQFWRRKIRTFHGILDVNKDGV ISYDDFKLLAERFIELGHLSEKHTHEFRNLLKDLWEKRWGPINPYNLVTVEQFLEDMH HVINDKHLVRRAHSFLPYLFRALDKDQSGEISEDEFKLFFQCLGLQEEDAILAFRSMD EDGDGVVTMKEFVKHGREFLITEDENKISKYFFGPLMEH" gene complement(282774..285701) /locus_tag="TcasGA2_TC015692" /gene_synonym="AUGUSTUS-3.0.2_15692" /db_xref="BEETLEBASE:TC015692" mRNA complement(join(282774..283017,283069..283239, 283292..283421,283473..283632,283829..283963, 284167..284272,284921..285066,285114..285457, 285513..285701)) /locus_tag="TcasGA2_TC015692" /gene_synonym="AUGUSTUS-3.0.2_15692" /product="Zinc finger protein 26-like Protein" /db_xref="BEETLEBASE:TC015692" CDS complement(join(282824..283017,283069..283239, 283292..283421,283473..283632,283829..283963, 284167..284272,284921..285066,285114..285457, 285513..285617)) /locus_tag="TcasGA2_TC015692" /gene_synonym="AUGUSTUS-3.0.2_15692" /codon_start=1 /product="Zinc finger protein 26-like Protein" /protein_id="EFA05505.2" /db_xref="BEETLEBASE:TC015692" /translation="MLNKCRVCLGFSENMKHVTHGDPLATMYTSLTKFEWIRDENIAS SLCPECETTLEKCHTFLEKCKKSHAILLKEIEEKSEIKEEENDFDDESESEGKNKSHL EQISVEEVEKAIFEYQERQKGGTYTCIVCNYVLISLRALSGHMSMKHKDVRANWCHIC NQTFDNLAEHNHRLLESCPFCEKTIAKKYFVEHLKAHAGIRTIQCCFCTNKFATYSAL QWHYSTKHSDEMKNDIATTKRKFCQICNKRVRSLPRHNSQLHEKTSAPKTHICHFCTK ELKTESGLKTHLKLHKSDGRHTCSYCGKPHRDRATMIQHERTHTGEKPFICSVCGKGF AQSSGLNTHMKLHTGRPEACHICEKRFCRPSELKLHLRKHAGEKPFLCTECGKAFKQK SHLTEHMNAAHSDVRPFECHYCHKAFKLKSLLTSHLQRHSGYKPFQCESCSYACFTQY RLQQHMKQHNKEVKREIGYVCPVCEKGFSSQAMFNTHVTSAHNAIL" gene 288893..318155 /locus_tag="TcasGA2_TC014995" /gene_synonym="AUGUSTUS-3.0.2_14995" /db_xref="BEETLEBASE:TC014995" mRNA join(288893..289037,289084..289184,292990..293127, 293180..293358,293437..293785,300454..300836, 300885..301395,303766..303876,303926..304330, 304382..304578,317236..318155) /locus_tag="TcasGA2_TC014995" /gene_synonym="AUGUSTUS-3.0.2_14995" /product="Gamma-aminobutyric acid type B receptor subunit 2-like Protein" /db_xref="BEETLEBASE:TC014995" CDS join(288902..289037,289084..289184,292990..293127, 293180..293358,293437..293785,300454..300836, 300885..301395,303766..303876,303926..304330, 304382..304578,317236..317959) /locus_tag="TcasGA2_TC014995" /gene_synonym="AUGUSTUS-3.0.2_14995" /codon_start=1 /product="Gamma-aminobutyric acid type B receptor subunit 2-like Protein" /protein_id="EFA04929.1" /db_xref="BEETLEBASE:TC014995" /translation="MLVCVRVLALLCLVGAQRPNLDARRHDVYIAGFFPFGKGVENSE TGRGVMPSVKLALDHVNDHSILSNYRLHMWWNDTMCNAAVGVKAFFDMMHSGPHKLML FGAACTHVTDPIAKASKHWHLTQLSYADTHPMFTKDNFPNFFRIVPSENAFNSPRLSL LKEFNWTRVGTIYQNEPRYSLAHNRLVAELDTLSYSVAETQSFTNEVTTALSKLKEKD TRIILGNFNERWARMIFCEAYKLEMYGRKYQWIIMGTYGHYWWRKNDSDSNCTLEEIE TALEQTLLTDLLPLSTSGEITISGITADEYNMEYDSRRGNEYSRFHGYTYDGIWAVAL AIKNVAHRIRVIKRNLTVSDFRYHDPIWEKLFLDALRNTSFEGVTGPVRFYNNERKAS ILLKQFQEGQEVKVGEYSAATQHLDLTLGAPLKWIGKHPPKDRTLLIIEHTRVNKTVY AILATLAVCGIIMATVFLAFNIKYRNQRYIKMSSPQLNNLIIIGCILTYTSIVFLGLD SGLSSIEAFPYICTARVWTLMAGFSLAFGAMFSKTWRVHSIFTDVKLNKKIIKDYKLF MVVGVLLFIDLVIMTTWQFADPFYRETKQLEPYPHPSSEDIFIIPENEYCASQHMTIF VGLIYVYKGILMIFGAFLAWETRHVSIPALNDSRHVGLSVYNVAIMCICGAAVALVLD HQDALFLIIGVFVLFCTTATLWLVFVPKMVELKRNPGGSIDKRIRATLRPMSKTRRDS SVSELETKLKDVKALNSKYRKTLLDKESELQMLIRRLGNEAKEILDSRTDSMSDTNRL SVPLLRKEAPSATETSDITSLCSLSSQDFASLHRADSQKRKKSPVCESPNLEPNAQPP DPKPTQNGDVPPQPDPQPRLESPEPKRPPNRTPEKRRMSMRTEIPEHDEICHRRVSVP SNRTTPKKKPECGTHVVAKSELWDTGSQHRCMKSHQKNRVSISQEEEDAHMHRSVSER NRHSQKREKSPVAKKDVNICNQQCNKLGYFQSTPNVAALKTAACPPKRDKSMYNATSE SELLDREILPIFQKLLTERNKSQHNIDYSFGRSCPNISIKCDIVEYL" assembly_gap 292106..292641 /estimated_length=536 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 294565..296767 /estimated_length=2203 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 298340..298389 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 305416..305716 /estimated_length=301 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 314078..314078 /estimated_length=1 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(321608..322541) /locus_tag="TcasGA2_TC015691" /gene_synonym="AUGUSTUS-3.0.2_15691" /db_xref="BEETLEBASE:TC015691" mRNA complement(join(321608..321854,321908..322026, 322093..322541)) /locus_tag="TcasGA2_TC015691" /gene_synonym="AUGUSTUS-3.0.2_15691" /product="putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like Protein" /db_xref="BEETLEBASE:TC015691" CDS complement(join(321643..321854,321908..322026, 322093..322187)) /locus_tag="TcasGA2_TC015691" /gene_synonym="AUGUSTUS-3.0.2_15691" /note="accepted without modification" /codon_start=1 /product="putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like Protein" /protein_id="EFA05745.1" /db_xref="BEETLEBASE:TC015691" /translation="MAKFLGIDKVLSVLNIVKENGGLRASLYKMFRMDELKVGTLVGT DKYGNKYYENKRFFYGRNRWIEYAPYYHLDYDGSQVPAEWFGWLHYKTDLPPDQEPFR PKYKWMLDHTENLSGTPGQYMPYSTTRPKIEPWIPTKRC" gene complement(322388..331484) /locus_tag="TcasGA2_TC015690" /gene_synonym="AUGUSTUS-3.0.2_15690" /db_xref="BEETLEBASE:TC015690" mRNA complement(join(322388..323762,326659..326799, 326852..327032,327079..327236,327292..327521, 327575..327765,331191..331484)) /locus_tag="TcasGA2_TC015690" /gene_synonym="AUGUSTUS-3.0.2_15690" /product="hypothetical protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC015690" mRNA complement(join(322388..323762,326659..326799, 326852..327032,327079..327236,327292..327521, 327575..327765,328338..328345,331121..331484)) /locus_tag="TcasGA2_TC015690" /gene_synonym="AUGUSTUS-3.0.2_15690" /product="hypothetical protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC015690" CDS complement(join(322722..323762,326659..326799, 326852..327032,327079..327236,327292..327521, 327575..327765,328338..328345,331121..331153)) /locus_tag="TcasGA2_TC015690" /gene_synonym="AUGUSTUS-3.0.2_15690" /note="transcript variant 2" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26956.1" /db_xref="BEETLEBASE:TC015690" /translation="MGGLVPLCPLTGIMVFTKAMPSGNDSEASGSNPAARKTFRPPWV KEGPNPLPVPPAPWTLKNTRRDSTKETPSENPLAGVQLRKTSVTTKEPQENGKENTFK RPQLRPVPPKEETKPPKETLPPVKLNSVTERQKNEAKKPLQKSPSRDEEIDRVTPVTR NALVREQSMRKLSQTPAPPPMPPPAPAMPGAKKNLTSKQKEQLEQLKSRPKVRPDWTA MLKEIESNKKLKHVECNDRSQPLLPKTKATEHFVFESEKDNVHNELLKQIQDGIRLKK VKTNDRSKPMLEGLRKFRRQMTIEEQIQKSVSMASMPPEEIEDEVDEMDDIDKVRDDL QSTKQMLALELRNKEAQIRENKRLLARIQNLEAELEKERNRDKSTNTSDKSSDEKLIQ SLRKESEQARKTSEEVEKKFAEATEQLDNTRFQLEEQKKQNQILEKKLQEALQGKRTS ISKDMVNGEESEDECFADEESEESDGEDTEEKREKRAQRELKQLRNKLRNFKNKEDNA KKERVALREIMKKHQIAIKEEKKKYKALQKEVDKMAALMKDVSDDEEEEEEEESEEEV EEEEESSEESETEESEDDSDSERSQSEPEDAPIEKKRENLSVRVTRHEKILAALKKGN LMMKTNAERLQDDLNKQKELTAGLQEDLDSVLAELG" CDS complement(join(322722..323762,326659..326799, 326852..327032,327079..327236,327292..327521, 327575..327749)) /locus_tag="TcasGA2_TC015690" /gene_synonym="AUGUSTUS-3.0.2_15690" /note="transcript variant 1" /codon_start=1 /product="hypothetical protein" /protein_id="EFA05504.1" /db_xref="BEETLEBASE:TC015690" /translation="MPSGNDSEASGSNPAARKTFRPPWVKEGPNPLPVPPAPWTLKNT RRDSTKETPSENPLAGVQLRKTSVTTKEPQENGKENTFKRPQLRPVPPKEETKPPKET LPPVKLNSVTERQKNEAKKPLQKSPSRDEEIDRVTPVTRNALVREQSMRKLSQTPAPP PMPPPAPAMPGAKKNLTSKQKEQLEQLKSRPKVRPDWTAMLKEIESNKKLKHVECNDR SQPLLPKTKATEHFVFESEKDNVHNELLKQIQDGIRLKKVKTNDRSKPMLEGLRKFRR QMTIEEQIQKSVSMASMPPEEIEDEVDEMDDIDKVRDDLQSTKQMLALELRNKEAQIR ENKRLLARIQNLEAELEKERNRDKSTNTSDKSSDEKLIQSLRKESEQARKTSEEVEKK FAEATEQLDNTRFQLEEQKKQNQILEKKLQEALQGKRTSISKDMVNGEESEDECFADE ESEESDGEDTEEKREKRAQRELKQLRNKLRNFKNKEDNAKKERVALREIMKKHQIAIK EEKKKYKALQKEVDKMAALMKDVSDDEEEEEEEESEEEVEEEEESSEESETEESEDDS DSERSQSEPEDAPIEKKRENLSVRVTRHEKILAALKKGNLMMKTNAERLQDDLNKQKE LTAGLQEDLDSVLAELG" gene complement(331588..332681) /locus_tag="TcasGA2_TC015689" /gene_synonym="AUGUSTUS-3.0.2_15689" /db_xref="BEETLEBASE:TC015689" mRNA complement(join(331588..332274,332522..332681)) /locus_tag="TcasGA2_TC015689" /gene_synonym="AUGUSTUS-3.0.2_15689" /product="Peptidoglycan-recognition protein LB-like Protein" /db_xref="BEETLEBASE:TC015689" CDS complement(join(331694..332274,332522..332564)) /locus_tag="TcasGA2_TC015689" /gene_synonym="AUGUSTUS-3.0.2_15689" /codon_start=1 /product="Peptidoglycan-recognition protein LB-like Protein" /protein_id="EFA05744.1" /db_xref="BEETLEBASE:TC015689" /translation="MYTFLFCFAAFLATGQMSELVVVPREGWHARPPTATEPMANPVP FVITHHSYIPPACHTPEACVQSMQTMQDMHQLQNGWNDIGYSFGVGGDGNAYEGRGWS KVGAHAPKYNNISIGICVIGDWTKELPPENQLNTVHKLIAFGVEKGYIREDYKLLGHR QVRDTECPGDRLFEEISTWEHFGVKGERRQENNGVEDNKLFFFKHKS" gene 334813..337287 /locus_tag="TcasGA2_TC014996" /gene_synonym="AUGUSTUS-3.0.2_14996" /db_xref="BEETLEBASE:TC014996" mRNA join(334813..335273,335322..337287) /locus_tag="TcasGA2_TC014996" /gene_synonym="AUGUSTUS-3.0.2_14996" /product="hypothetical protein" /db_xref="BEETLEBASE:TC014996" CDS join(334889..335273,335322..336451) /locus_tag="TcasGA2_TC014996" /gene_synonym="AUGUSTUS-3.0.2_14996" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04930.2" /db_xref="BEETLEBASE:TC014996" /translation="MARRPPPSHRIRVENEMIRRREKEFCHDRLWNGQRRYYEDFERK NTKYDEWTSPRYYENQQKLMEKTKKEREHEENLERRRAKLKKLLYDEEKLQEAELQIR KVRNMTSVRSPRPNEIPTEILKELNNGLKLEEEERRRHQAELKLYHQWRSSNPFLNHY ERMQASRDLKLSWLDQQIENRMKKEKEEEECRKLLKEREKIMKEEQEKFDQEQKRLQL KKEELKASLEQQIDEMRLKTQISEDLKRKEDEERRKKAELDEIALKRIEEEKKRLERE CALDNIKQHKLKLKKKAEDVVKTLDEERYLIMKLKELEIAERLEDEMKKIEVKAALDQ FLALNEEQKKLEKIRQKNLDFLFDSEAKTMYEQQEKFWKEEEASRAKLLKDVIDTIQG QIQSNIEKNRRRQLEVIQEREEMLKKIEEHNQEMARLKEEEETKKRKMMSMLKNDLEM KNLKKKAKENAELRRIDEELERVRKEEERLKQEILNIQRRQGPIKSTRSKSFFC" gene complement(337359..343831) /locus_tag="TcasGA2_TC015688" /gene_synonym="AUGUSTUS-3.0.2_15688" /db_xref="BEETLEBASE:TC015688" mRNA complement(join(337359..337830,337882..338497, 339834..339947,343592..343831)) /locus_tag="TcasGA2_TC015688" /gene_synonym="AUGUSTUS-3.0.2_15688" /product="Calcium release-activated calcium channel protein 1-like Protein" /db_xref="BEETLEBASE:TC015688" CDS complement(join(337592..337830,337882..338497, 339834..339941)) /locus_tag="TcasGA2_TC015688" /gene_synonym="AUGUSTUS-3.0.2_15688" /codon_start=1 /product="Calcium release-activated calcium channel protein 1-like Protein" /protein_id="EFA05503.1" /db_xref="BEETLEBASE:TC015688" /translation="MDQSTQVDFPIVVRKMRRHNTSADLYATNKGHSNTWNNSNKVSM PRPKSLNFPDPLTNRTKIIYYSDSPLSRLPLPVSDLHLGSISRERTPPFSCSSSVAST SSPTYKPDPSCQCSNDSIYCRRIPANSTQGLSWRRLHMSRAKLKATATTSELLSGFAM VAMVELQINDDTAVPEWLFVIFAVCTTVLVAVHIFALMISTYILPNIDAVAKLEICEM VAESPHERMRGFIELAWAFSTVLGLFLFLVEVAILCWVKFWDYSFTAATAATVIVIPV LITFVLFAVHFYHSLVVYKCNASVNDMEKLENMKKHLDEVTSPV" gene 340966..346448 /locus_tag="TcasGA2_TC014997" /gene_synonym="GLEAN_14997" /db_xref="BEETLEBASE:TC014997" mRNA join(340966..341084,346083..346166,346400..346448) /locus_tag="TcasGA2_TC014997" /gene_synonym="GLEAN_14997" /product="hypothetical protein" /db_xref="BEETLEBASE:TC014997" CDS join(340966..341084,346083..346166,346400..346448) /locus_tag="TcasGA2_TC014997" /gene_synonym="GLEAN_14997" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04931.1" /db_xref="BEETLEBASE:TC014997" /translation="MEEEAPEERIAKIERCQAKLAAAKAGLQARQGGPPPGAVSIPSV ASFDPEPGLSAQPPRRSFRFAHNRLIMIMMVALQVRTSI" gene 347063..353773 /locus_tag="TcasGA2_TC014998" /gene_synonym="AUGUSTUS-3.0.2_14998" /db_xref="BEETLEBASE:TC014998" mRNA join(347063..347099,349935..350819,353228..353773) /locus_tag="TcasGA2_TC014998" /gene_synonym="AUGUSTUS-3.0.2_14998" /product="Fructose-bisphosphate aldolase-like Protein" /db_xref="BEETLEBASE:TC014998" CDS join(349954..350819,353228..353456) /locus_tag="TcasGA2_TC014998" /gene_synonym="AUGUSTUS-3.0.2_14998" /codon_start=1 /product="Fructose-bisphosphate aldolase-like Protein" /protein_id="EFA04932.1" /db_xref="BEETLEBASE:TC014998" /translation="MATHFNYPDPALQDELRKIANAIVAPGKGILAADESVGTMGKRL ADIGLENTEENRRKYRQLLFTSDKTIGDYISGVILFHETLYQKADDGTPFPELLKQRG IIPGIKVDTGVVPLFGTQDECTTQGLDDLGKRCAQYKKDGCHFAKWRCVLKIKDHTPS YQACLENANVLARYASICQENRIVPIVEPEILPDGTHDIERCQKVTETVLAFVYKALN DHNVFLEGTLLKPNMVTGGMSHPVKFSPEQIGRATVTALSRTVPPAVPGIVFLSGGQS EEEATVNLDAINKFQGKKPWVLSFSYGRALQASVLRAWGGKDANVPAGQAELMKRAKA NSEASLGKYVAGSVQGQAADQGLFVKNHAY" gene 354726..366430 /locus_tag="TcasGA2_TC033419" /old_locus_tag="TcasGA2_TC014999" /old_locus_tag="TcasGA2_TC030178" /gene_synonym="AUGUSTUS-3.0.2_33419" mRNA join(354726..356261,358665..360668,360721..361208, 361258..361541,363879..364972,365717..365995, 366043..366430) /locus_tag="TcasGA2_TC033419" /old_locus_tag="TcasGA2_TC014999" /old_locus_tag="TcasGA2_TC030178" /gene_synonym="AUGUSTUS-3.0.2_33419" /product="hypothetical protein" CDS join(354813..356261,358665..360668,360721..361208, 361258..361541,363879..364972,365717..365995, 366043..366315) /locus_tag="TcasGA2_TC033419" /old_locus_tag="TcasGA2_TC014999" /old_locus_tag="TcasGA2_TC030178" /gene_synonym="AUGUSTUS-3.0.2_33419" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26957.1" /translation="MEASQESISSRRDKLNTQIIGDQKLTLINRECLLDALQALYDEC SLDALQKYDKQIAQFVSKYKNTLLEVKKLRVNETDFEIKDVIGRGHFGEVHVVKEKQT GDIYAMKTIRKCDSFEKTNFDVERDIMAFAASPWITSLQYAFQDSVYLYYVMEYHPGG DLLGLLYRQGGTLPESAATFYLAEIVLALEDLHSMGFVHRDIKPDNILLDRCGHLKLV DFGSAAKLNQQGAVDKGLPVGTPDYIAPEVLQSLERNSKSHYGVSCDFWSLGALAFEL VVGKPPFSGQNTSVTYSRIINHSNNLKFPQDVCLTQAYVSLVRGLLTEAKARLRGPQI KKHPLFKHIHFDSLRDQVPPYVPKISSMEDTSNFADVGAKKTTPSMENFKKKTQFSGR NLPFIGFTFTPGASSCGREFDRNSRAKDEIIRNMREELEVVRRDLMKREDFEEVKLVL EKKILEKNQKLENIESVREKLERDLAASMAESTALKRTLEIERKDRAELERKALDLIK SAKIKWETSERNKIESLKLEIEQQKEKIAQLGTTNKMLNEQLQKAFKMENKHKESIEA VEHLNRRSVIGLESRIEKVALDSKQKIMSLQATLDETIKQKKELEFEIEKLKDSEDEL RKKLSKSCDDYTVLNGAALEAEKLVKELGQKVGDFEREFEKAESYKAKIKTLSREIDD FKAKIRDLENANLLLKEENKSIEEFKNQINSLKDTKVQNERKINELESKLQEEEQKCV TLKKELDNSQNLINESQQLKELRVKMWKMEKELGNAKIDKRIVERELKDAENEIKNLN EEIKNLKDKIEENRKIHSAALLELNNINENLSLEMVKVRESHKNLEENLESEKNRNGE EKQLIVQLRDTISEKNKTISTIQSQLQSSRHELATLEEKNQKLLESNLKKSKQFEEIS NEKEKLSREVNETKRQLENAQTNLEALREACLIIENQVIEYEKINSSIQAEKSSLAEN TEKLIKDLCKAKEEIQEAKKATNEEKSLRLLAETKAKRLAEDVELLQNECEAYKDQCF KFKECSNNLSEELTLSEERVSDLEVTLKSYERQIEDFVSESNILKEEISQYLTQMAAL KESNFKLKQQIQDLKEARNVLVEKVEELERVLNGKVNYYEEREMKNESIIKQQTKLIE YLQVKIDEHNSKKRTLTDKLFGSKKENVQPLVLPVNKDLEGQLAKQKQINKNLQEEIY KLKAELNCRTPITKVQRHKSEIVSPKTRSPQIISHKFILKLCKNLTRCDHCAKQIMVG RDVNTCTKCHVNVHQNCVSSVKSTCGLPNTCVKNRKSESNVVIYEGWIKLLTKNNTWD KKYACLTDSKLNVYLTKDKKSLTESFDLKLPNSRKKVVLEPLPSEIGVNVASTDLPFV MKVEVLVQGGPMVSMVFMALSVEERNQWYKAFQELFDEAAGQHLEAIFTLPDQIYANC VLDLTKNIKVLGTDQGLFSYHNDQLVHIEGPTDIHHISIIPNSNTVVMISDLTSILIS CDLNHLINLTQCAPCTKPVLNYRTINIKEMDGFHYLQTSKFPKHQLFCAATCRQLVIV KYDCENYEFVPLRIMDTAEPLGCALFTEHSLIVGADKFFEIDLATFKAEEFLDGSDAR LKFAVKCHKMQSFPVAILEISQNPKEFLVCFNEFSVFVDEYGRSSREEELKTSYLPIG FHFVAPFLYIIQYSGVEVLKVGGNVANVTVDLKNMRFLGESPNGIYLYHDGRVKLLEG RRVVDCDDVSSVSQSEAGDEDRFSFTSSMVQSLDGNSSDLENSSEENLFLEHYEVINR QTLDTADVKTLTTVVEKECYKMKVTIDAFNDIFGWSFLLFTLYSSLLLLDYVSCVVRN EYKYKSDKMAEIISSDLLQLCIFFVALIILILQCGRVRSEVVKILNVLKKIALRRQTT NGDLDELIVTLSTHYFPVFSACDYFTIETKTVLDVLGVTVTYLIVIIQFDDKIVQV" gene complement(366491..367921) /locus_tag="TcasGA2_TC015687" /gene_synonym="AUGUSTUS-3.0.2_15687" /db_xref="BEETLEBASE:TC015687" mRNA complement(join(366491..366816,367232..367467, 367518..367709,367782..367921)) /locus_tag="TcasGA2_TC015687" /gene_synonym="AUGUSTUS-3.0.2_15687" /product="Vacuolar protein sorting-associated protein 29-like Protein" /db_xref="BEETLEBASE:TC015687" CDS complement(join(366699..366816,367232..367467, 367518..367709,367782..367784)) /locus_tag="TcasGA2_TC015687" /gene_synonym="AUGUSTUS-3.0.2_15687" /codon_start=1 /product="Vacuolar protein sorting-associated protein 29-like Protein" /protein_id="EFA05502.1" /db_xref="BEETLEBASE:TC015687" /translation="MLVLVLGDLHIPHRCSTLPPKFKKLLLPGRIQHILCTGNLCTKE SYDYLKTLASDVHVVRGDFDDNLNYPEQKVVTVGQFRIGLLHGHQVVPWGDPESLALI QRQLDVDILISGHTHKFEAYEHESKFYINPGSATGAYNALDITVTPSFVLMDIQNTTV VTYVYQLVGDEVKVERIEFKKN" gene 368113..372569 /locus_tag="TcasGA2_TC015001" /gene_synonym="AUGUSTUS-3.0.2_15001" /db_xref="BEETLEBASE:TC015001" mRNA join(368113..368252,368294..368535,368584..368854, 371198..371378,371431..372569) /locus_tag="TcasGA2_TC015001" /gene_synonym="AUGUSTUS-3.0.2_15001" /product="Cell cycle checkpoint control protein RAD9A-like Protein" /db_xref="BEETLEBASE:TC015001" CDS join(368246..368252,368294..368535,368584..368854, 371198..371378,371431..371782) /locus_tag="TcasGA2_TC015001" /gene_synonym="AUGUSTUS-3.0.2_15001" /codon_start=1 /product="Cell cycle checkpoint control protein RAD9A-like Protein" /protein_id="EFA04934.2" /db_xref="BEETLEBASE:TC015001" /translation="MKVLAKALQALSKIGDELFIEAKTDGLAFITLNSSKTVCSRFTF QEAFFSSYEVNQNDSTEDISCKIHMKIFLPLFKGNLEKKLEYFKVEYLVDSDFIIFKM KYKCDDIVMVHKLRLMDTETLSIGVTTNSGCNNVSASSSFYNQLLSMFNLTDDEVTFE ITKAKVVARNYCLGTPCRPKMMRTQINLNSTEFLTYFITKTSSINFSLKPFRTLVHFA ETFNLNVDLNFEIGGKPLSMVLKNPTFEVSFIVATLDPYSDTNSSIATVSSPKIATKK PPKITDEADDLTSKESSFLELMKQSENVNDIDVIPKSPESPRSKKAKTVFGRCYDPTF HETVLGEVLAANSDSE" gene 374003..374164 /locus_tag="TcasGA2_TC015002" /gene_synonym="GLEAN_15002" /db_xref="BEETLEBASE:TC015002" mRNA 374003..374164 /locus_tag="TcasGA2_TC015002" /gene_synonym="GLEAN_15002" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015002" CDS 374003..374164 /locus_tag="TcasGA2_TC015002" /gene_synonym="GLEAN_15002" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04935.1" /db_xref="BEETLEBASE:TC015002" /translation="MKQSEHVKDIDVIPKSPESPRSKKAKTVFGRCYDPTFHETVLGE VLAANSDSE" gene complement(374034..389121) /locus_tag="TcasGA2_TC015686" /gene_synonym="AUGUSTUS-3.0.2_15686" /db_xref="BEETLEBASE:TC015686" mRNA complement(join(374034..374898,374943..375400, 375449..375573,378557..378898,378944..379590, 383114..383454,383503..383843,388270..388706, 388758..388904,388955..389121)) /locus_tag="TcasGA2_TC015686" /gene_synonym="AUGUSTUS-3.0.2_15686" /product="Small G protein signaling modulator 2-like Protein" /db_xref="BEETLEBASE:TC015686" CDS complement(join(374810..374898,374943..375400, 375449..375573,378557..378898,378944..379590, 383114..383454,383503..383843,388270..388706, 388758..388904,388955..388970)) /locus_tag="TcasGA2_TC015686" /gene_synonym="AUGUSTUS-3.0.2_15686" /codon_start=1 /product="Small G protein signaling modulator 2-like Protein" /protein_id="EFA05501.2" /db_xref="BEETLEBASE:TC015686" /translation="MAPNNENEFKGRLIAAVKKEVKQVMEESVTRKFVHEESGSVTSL CAAVEACLSQGLRRRALGLFKTSSTTALLHKIAKHCKEAAIISKRVQEIENADPTRRS SSSSESMNKPTLKKNASLPSNPLPKYLWIRLALFEKQLAKIIDYLVSNANKYYDKDAL VADPDYGSILSSLLVGPCALDYSRTKTPDHFWTDPPADELVQRHRISSGHSTPPSVRR PILNFRRSLNASSDDSITNRTNTQHLAKDYVESLHQNSRATLLFGKNNVLVLPVNADV SQPMPGYLSLHQTASGLTIKWTPNQLMNGFTDEVQDKSVYWDYALQVRLDEIVYVHCH QDSETGGTVILVGQDGVQRPPIHFPKGGHMLAFLSCIETGLLPRGRLDPPLWSQRSGT NSNKRRRPLPALSETEETTKDYVFRIADNSTHKDMLKRNELMDTHISLPPKARVQLPS TSTSSESSTKSFSIDQNAPDSPPSICIQAVCDSMKRQIISRAFYGWLAYCRHLSTVRT HLSGLVNSKIVNGEGASDGITVEKWNELCIDGVVSDYEEVYRLTYFGGVAHDLRKELW PYLLGHYKFGSTAQQRLELSEETKQAYENTMSEWLAVEAIVRQRDKETQANAIAKLSS ESMSGEQVPAQIQRDLSNEVFEDMLSDEDSEEKPPQTRRNTIRYESDGEVAEDEVQVN THEELKDFIHNVIVTNASVDMGNLGNDNDVSHKNNLDAVAEENSSLDACIEAHGLASP ARSACVSPASSNGGVYSQELLETFGLNLHRIEKDVQRCDRNYWYFTVDNLEKLRNVMC TYVWEHLDIGYMQGMCDLVAPLLVIFNDESLTYACFCHLMERMVENFPNGNAMDCHFA NMRSLIQILDSEMYELMHSHGDYTHFYFCYRWFLLDFKRELVYSDVYATWEVIWAAQH VASSHFVLFLALALLETYRDIILSNCMDFTDIIKFFNEMAERHNASAVLSLARDLVLQ LQLLIENK" assembly_gap 381770..382206 /estimated_length=437 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 385556..385904 /estimated_length=349 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 391763..392555 /locus_tag="TcasGA2_TC033420" /gene_synonym="AUGUSTUS-3.0.2_33420" mRNA join(391763..391900,391946..392130,392174..392311, 392362..392555) /locus_tag="TcasGA2_TC033420" /gene_synonym="AUGUSTUS-3.0.2_33420" /product="putative cGMP 3',5'-cyclic phosphodiesterase subunit delta-like Protein" CDS join(392030..392130,392174..392311,392362..392443) /locus_tag="TcasGA2_TC033420" /gene_synonym="AUGUSTUS-3.0.2_33420" /codon_start=1 /product="putative cGMP 3',5'-cyclic phosphodiesterase subunit delta-like Protein" /protein_id="KYB26958.1" /translation="MKLTYLKTSSNVVQYLESLILVPKNKSKNFVWSRKYCLRDGVLK SGTSNLVLLCQNRQIHGNRSWEAAPESEMMPASVLNGNVVIETKFYDDDLLISTSRVR LFYV" gene 395773..405991 /locus_tag="TcasGA2_TC015003" /gene_synonym="AUGUSTUS-3.0.2_15003" /db_xref="BEETLEBASE:TC015003" mRNA join(395773..396082,396127..396275,396383..396486, 396537..396716,398971..399175,399228..399482, 399526..400056,404892..405991) /locus_tag="TcasGA2_TC015003" /gene_synonym="AUGUSTUS-3.0.2_15003" /product="RING finger protein 207-like Protein" /db_xref="BEETLEBASE:TC015003" CDS join(395913..396082,396127..396275,396383..396486, 396537..396716,398971..399175,399228..399482, 399526..400056,404892..405808) /locus_tag="TcasGA2_TC015003" /gene_synonym="AUGUSTUS-3.0.2_15003" /codon_start=1 /product="RING finger protein 207-like Protein" /protein_id="EFA04936.1" /db_xref="BEETLEBASE:TC015003" /translation="MEPPGMETIDFPKNPLLCPICHDYFTEPCILSCYHTFCARCLRG REQDRRLVCPFCRQPTLLKDGSMLPPPDSLMRQLIDIANSENPPCSNCDKRDRANMYY CNTCGQALCSHCRDNTHRAKMFSSHDIVHMTKCTKEPKRCPQHGEQYIMYSPLQNNML CVNCFRDLPNEIRAQCVDIDTAHSQAAKRLERGQNAIMDLQTSVRDGIIALKSMMDEL RRNMDSEKHTINTFCQGMQEAMAKTHAAMIMEVQRQYESKDRIYRSQLLVLGTVMPVL QLHLVLCTTFTAAANKYQFLELCPSLLERLSAVGQLSQPVRSLQSSTIKTNYRSEFAQ CLEPWIGPAAVTQHQSEVAAASRMYDSAPPATKKQQTALKNKVLEGDSSFSAHCRSFE SQIRDLNQQFNVVKEKVSDLHRDITALRKAQAPPLAARYDMLMRECLHLEQNLERQQQ ELDRMAENFDASWEEQLWRLRVEQEVFSCQRADVMTLRNELKHISQLVGQLEPYIRSL TPAQQSESAAEHSQQMQTLLDHFNVLQQSDASLGKIPRSRSRVLGQLFEKVRPNIQER ERSKSAGQTDKPLSTPLKPKKPFIPSTHQMNIERLEAHLKEKIHEMVCRRQSSSTPQS KSDPETERKLSKTDLDSISKLGTKQRIMYKKIGKSCDKINTCSKSDGDVKKRAESDYQ RISEATSQSVKALVHKETRSSPSSPKCKGKPKPPPKQRKTPKVYPYSDGEDNVFYSLH DSADSMSTSSRRSSFEGPDKTLVVVINKRSNNMTMAQKQRSWETFPPKRRHHMCHKLS APNPMPLRKADSFEGHEEAVKSLVAAVQETRRKPKGGN" gene complement(407794..442846) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" mRNA complement(join(407794..408315,408367..408624, 411501..411847,414576..415122,439135..439438, 442732..442846)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /product="Bicaudal D-related protein homolog-like Protein" /note="transcript variant 1" mRNA complement(join(407794..408315,408367..408624, 411501..411820,414576..415122,426746..426771)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /product="Bicaudal D-related protein homolog-like Protein" /note="transcript variant 5" mRNA complement(join(407794..408315,408367..408624, 411501..411823,414576..415122,426746..426771)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /product="Bicaudal D-related protein homolog-like Protein" /note="transcript variant 4" mRNA complement(join(407794..408315,408367..408624, 411501..411847,414576..415122,426746..426771)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /product="Bicaudal D-related protein homolog-like Protein" /note="transcript variant 3" CDS complement(join(408184..408315,408367..408624, 411501..411847,414576..415122,439135..439350)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /note="transcript variant 1" /codon_start=1 /product="Bicaudal D-related protein homolog-like Protein" /protein_id="KYB26959.1" /translation="MLKSLEDYIVDMENRSAMDHSQPPTEDVWTQLQQKENDLLLAAE LGKALLEKNEELKKQHDAVIEDYSKKLEAVEQDRHLLKRKLANKESEFEGRILELQND ITELSNKLATKESVLKQWDRDKSNLVAELNAQNARLTSQLKEAAAVESQLQQQIECLK QECAVGKTNLHEHMSSVDTLRDELDLVTEKNKELERRLHMAAAERDSLANALEEASDR ILLLERHAREQDLRYQHSLKDYSLPQEKLSVEDRLNAGEQRSLLAEMDISEPTLSQEC MSVYRQLRSLVQQLKSHNDDDSGLHSDCSTTSFEENAQFSAGLLSEVAQELVGLVLDT DVVRLLERLEQARREIQERDAELARRSEKIMELSTKVSVCEVELQAAMEERDRARNDA SNSSLAQEDVVIKAREDRDLAVQRKTKAEVELAKTRVELMQANSQLLEAIQQKVELSQ QLEQWQMDMQELLDEQLRTKLTSQEVSMKQIVHTPVAPPRRKLLSFFLR" CDS complement(join(408184..408315,408367..408624, 411501..411820,414576..415122,426746..426751)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /note="transcript variant 5" /codon_start=1 /product="Bicaudal D-related protein homolog-like Protein" /protein_id="KYB26960.1" /translation="MNAVEQDRHLLKRKLANKESEFEGRILELQNDITELSNKLATKE SVLKQWDRDKSNLVAELNAQNARLTSQLKEAAAVESQLQQQIECLKQECAVGKTNLHE HMSSVDTLRDELDLVTEKNKELERRLHMAAAERDSLANALEEASDRILLLERHAREQD LRYQHSLKDYSLPQEKLSVEDRLNEMDISEPTLSQECMSVYRQLRSLVQQLKSHNDDD SGLHSDCSTTSFEENAQFSAGLLSEVAQELVGLVLDTDVVRLLERLEQARREIQERDA ELARRSEKIMELSTKVSVCEVELQAAMEERDRARNDASNSSLAQEDVVIKAREDRDLA VQRKTKAEVELAKTRVELMQANSQLLEAIQQKVELSQQLEQWQMDMQELLDEQLRTKL TSQEVSMKQIVHTPVAPPRRKLLSFFLR" CDS complement(join(408184..408315,408367..408624, 411501..411823,414576..415122,426746..426751)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /note="transcript variant 4" /codon_start=1 /product="Bicaudal D-related protein homolog-like Protein" /protein_id="KYB26961.1" /translation="MNAVEQDRHLLKRKLANKESEFEGRILELQNDITELSNKLATKE SVLKQWDRDKSNLVAELNAQNARLTSQLKEAAAVESQLQQQIECLKQECAVGKTNLHE HMSSVDTLRDELDLVTEKNKELERRLHMAAAERDSLANALEEASDRILLLERHAREQD LRYQHSLKDYSLPQEKLSVEDRLNAEMDISEPTLSQECMSVYRQLRSLVQQLKSHNDD DSGLHSDCSTTSFEENAQFSAGLLSEVAQELVGLVLDTDVVRLLERLEQARREIQERD AELARRSEKIMELSTKVSVCEVELQAAMEERDRARNDASNSSLAQEDVVIKAREDRDL AVQRKTKAEVELAKTRVELMQANSQLLEAIQQKVELSQQLEQWQMDMQELLDEQLRTK LTSQEVSMKQIVHTPVAPPRRKLLSFFLR" CDS complement(join(408184..408315,408367..408624, 411501..411847,414576..415122,426746..426751)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /note="transcript variant 3" /codon_start=1 /product="Bicaudal D-related protein homolog-like Protein" /protein_id="KYB26962.1" /translation="MNAVEQDRHLLKRKLANKESEFEGRILELQNDITELSNKLATKE SVLKQWDRDKSNLVAELNAQNARLTSQLKEAAAVESQLQQQIECLKQECAVGKTNLHE HMSSVDTLRDELDLVTEKNKELERRLHMAAAERDSLANALEEASDRILLLERHAREQD LRYQHSLKDYSLPQEKLSVEDRLNAGEQRSLLAEMDISEPTLSQECMSVYRQLRSLVQ QLKSHNDDDSGLHSDCSTTSFEENAQFSAGLLSEVAQELVGLVLDTDVVRLLERLEQA RREIQERDAELARRSEKIMELSTKVSVCEVELQAAMEERDRARNDASNSSLAQEDVVI KAREDRDLAVQRKTKAEVELAKTRVELMQANSQLLEAIQQKVELSQQLEQWQMDMQEL LDEQLRTKLTSQEVSMKQIVHTPVAPPRRKLLSFFLR" assembly_gap 408874..410019 /estimated_length=1146 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 413401..413647 /estimated_length=247 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 417686..419629 /estimated_length=1944 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 423298..425105 /estimated_length=1808 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 430873..432037 /locus_tag="TcasGA2_TC015004" /gene_synonym="AUGUSTUS-3.0.2_15004" /db_xref="BEETLEBASE:TC015004" mRNA join(430873..431085,431255..432037) /locus_tag="TcasGA2_TC015004" /gene_synonym="AUGUSTUS-3.0.2_15004" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015004" CDS join(430947..431085,431255..431766) /locus_tag="TcasGA2_TC015004" /gene_synonym="AUGUSTUS-3.0.2_15004" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04937.1" /db_xref="BEETLEBASE:TC015004" /translation="MAAKNLRKIQSLLSRNYCKKSDTSSIWNYFKKGDKKPALERCRK RQVRRQDPDLSAFGGQAFRTCGKAYVVQRDVIPPGGGEHSEEDRVLMKIEADLSNKDN VCDPMPPFKSVEQRMIDLSERKLHPFYKRFMSLPNKNFVGEETPTGFAPYKCKSGPVK PEEIPENLQFNKQLLERKNIFADFKRVELPKQMVVRIVEMEQNRKPTLEKKGKKSD" assembly_gap 437368..437415 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" mRNA complement(join(439030..439438,442732..442846)) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /product="Bicaudal D-related protein homolog-like Protein" /note="transcript variant 2" CDS complement(439072..439350) /locus_tag="TcasGA2_TC030908" /old_locus_tag="TcasGA2_TC015684" /old_locus_tag="TcasGA2_TC015685" /gene_synonym="AUGUSTUS-3.0.2_30908" /note="transcript variant 2" /codon_start=1 /product="Bicaudal D-related protein homolog-like Protein" /protein_id="KYB26963.1" /translation="MLKSLEDYIVDMENRSAMDHSQPPTEDVWTQLQQKENDLLLAAE LGKALLEKNEELKKQHDAVIEDYSKKLEVCYVSVKGDKLFSYGRLILL" gene 442958..446380 /locus_tag="TcasGA2_TC015005" /gene_synonym="AUGUSTUS-3.0.2_15005" /db_xref="BEETLEBASE:TC015005" mRNA join(442958..443116,444946..445578,445626..446380) /locus_tag="TcasGA2_TC015005" /gene_synonym="AUGUSTUS-3.0.2_15005" /product="Coiled-coil domain-containing protein 63-like Protein" /db_xref="BEETLEBASE:TC015005" CDS join(443039..443116,444946..445578,445626..446309) /locus_tag="TcasGA2_TC015005" /gene_synonym="AUGUSTUS-3.0.2_15005" /codon_start=1 /product="Coiled-coil domain-containing protein 63-like Protein" /protein_id="EFA04938.1" /db_xref="BEETLEBASE:TC015005" /translation="MRNPMPADQLDMEMMAEAELARLQRQYRIMEGDRKAFLDEVSNK LKKQRKIITRLRKERDDLMADIKVATCDGQKRKDSKISAKLELLLQKHEEIVAQVQKE KFRLEELEQQIRKTEKQVRKLRLKDVTEGEYQERIKSGQKSVKMLENKLETTHKRFCS VLTENKQMRDEIDHLLKERTRFNAIWEKLVFDLNMGKKYMLDLIEQATLAYDQREEWC SKLQALKIRAHNDVITHTQEMREMQRQLDHDGNLREFLTIKGQKRVMKDLEEKEMKKK EQERENLQKQIKIYQETLDKIKTFCEEEDVERIAAKYLKQEEENFALFNYVNELNHEL ETLSDSIEELEGKINEQKQICEQKAQKEKDSLESLKRALEEATQQANQDEANLAQTEE DLRLILKGIKDVFELVECDCAPILDLLGENPDVNEDNALIYLGLIEKKVSSLITTAYF KEKSVPLIFIDSFF" gene 448208..450107 /locus_tag="TcasGA2_TC015006" /gene_synonym="AUGUSTUS-3.0.2_15006" /db_xref="BEETLEBASE:TC015006" mRNA join(448208..448335,448379..449659,449706..449809, 449859..450107) /locus_tag="TcasGA2_TC015006" /gene_synonym="AUGUSTUS-3.0.2_15006" /product="Coiled-coil domain-containing protein 63-like Protein" /db_xref="BEETLEBASE:TC015006" CDS join(448255..448335,448379..449659,449706..449809, 449859..450042) /locus_tag="TcasGA2_TC015006" /gene_synonym="AUGUSTUS-3.0.2_15006" /codon_start=1 /product="Coiled-coil domain-containing protein 63-like Protein" /protein_id="EFA04939.1" /db_xref="BEETLEBASE:TC015006" /translation="MRKLSDEDKYQQQQKQLERELVSLRREFATLERDSSQFNSLKKL KKYTKVFNIFKNEYENIVTNLEVAAAPGYERRDKIMYEELSQRLHDYNCYHDGEILKK TQMKELEGQIRNVSKAVQCLRNQQITDRQFEERVHNARQTLETLENKLETQMTTFNLI VAKNGKLREEIDHLLWDRRNFLTIWNRFIRKLNTGKRILIDLIEQATIAYDQREEWCN KLQLLRSSAHRDLLANIDQMRSLKQKVDNAKKLEEFFTTKGQKRVMKDLMKKEREKRE ERKKKLGTKLQHYESLMNEILDFSQHAEIKDIARKYYNREAQNFSAFKFIADTINNME MINDQLGILHLEIDELKAVHDLRAETQHETIDNLETDLVQASEETKNAQQDLEDLNLH LKSVMQGVTELFRMCKCDKDPLLKLLGDNATIHEYNVLLFLQLLEKTIQIYLITAGYK DKVQAEKRSSGKAKILATVDTTTFIYPIERIVRADPCSLCIEHEMVSDVIDVVQRPWT RKEAKEMLQQRLDLPGASTKLHTVSKCFLPQARHIKQKKYC" gene 450748..451862 /locus_tag="TcasGA2_TC015007" /gene_synonym="AUGUSTUS-3.0.2_15007" /db_xref="BEETLEBASE:TC015007" mRNA join(450748..451443,451487..451590,451641..451862) /locus_tag="TcasGA2_TC015007" /gene_synonym="AUGUSTUS-3.0.2_15007" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015007" CDS join(450793..451443,451487..451590,451641..451824) /locus_tag="TcasGA2_TC015007" /gene_synonym="AUGUSTUS-3.0.2_15007" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04940.2" /db_xref="BEETLEBASE:TC015007" /translation="MRSLKQKVEHAKKLEEFFTTKGQKRVMKDLMKKEKEKREERKKK LGTKLQHYESLMNEILDFSQHAEIKDIARKYYNREAQNFSAFKFIADTINNMEMINDQ LGLLHLEIDELKAVHDLRAETQHETIDNLETDLVQASEETKNAQQDLEDLNLHLKSVM QGVTELFRMCKCDKDPLLKLLGDNATIHEYNVLLFLQLLEKTIQIYLITAGYKDKVQA EKRSSGKTKILATVDTTTFIYPIERIVRADPCSLCIEHEMVSDVIDVVQRPWSRKEAK EMLQQRLDLPGASTKLHTVSKCFLPQARHIKQKKYC" gene complement(451878..452416) /locus_tag="TcasGA2_TC015682" /gene_synonym="AUGUSTUS-3.0.2_15682" /db_xref="BEETLEBASE:TC015682" mRNA complement(451878..452416) /locus_tag="TcasGA2_TC015682" /gene_synonym="AUGUSTUS-3.0.2_15682" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015682" CDS complement(451899..452390) /locus_tag="TcasGA2_TC015682" /gene_synonym="AUGUSTUS-3.0.2_15682" /codon_start=1 /product="hypothetical protein" /protein_id="EFA05497.1" /db_xref="BEETLEBASE:TC015682" /translation="MIKCKELQEELQETLDELKLSKTLKKKRKSSTSLVSVIAENQKK FADCDKELLIDYISTLQSDNENLKQIISEQKQELENIEKTALTKEQTTNLLQELKGLE EKFEVAQQTKTYFKEQWQRACQEIHNLKTEDYKQLQNQLQERREELDHLCILDEPTEL VSF" gene 452528..453222 /locus_tag="TcasGA2_TC015008" /gene_synonym="AUGUSTUS-3.0.2_15008" /db_xref="BEETLEBASE:TC015008" mRNA 452528..453222 /locus_tag="TcasGA2_TC015008" /gene_synonym="AUGUSTUS-3.0.2_15008" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015008" CDS 452589..453173 /locus_tag="TcasGA2_TC015008" /gene_synonym="AUGUSTUS-3.0.2_15008" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04941.2" /db_xref="BEETLEBASE:TC015008" /translation="MKDLMKKEREKREERKKKLGTKLQHYESLMNEILDFSQRAEIKD IARKYYNREAQNFSAFKFIADTINNMEMINDQLGILHLEIDELKAVHDLRAETQHETI DNLETDLVQASEETKNAQQDLEDLNLHLKSVMQGVTELFRMCKCDKDPLLKLLGDNAT IHEYNVLLFLQLLEKTIQIYLITVGYKDKVQVRD" gene complement(453251..455396) /locus_tag="TcasGA2_TC015681" /gene_synonym="AUGUSTUS-3.0.2_15681" /db_xref="BEETLEBASE:TC015681" mRNA complement(453251..455396) /locus_tag="TcasGA2_TC015681" /gene_synonym="AUGUSTUS-3.0.2_15681" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015681" CDS complement(453619..455352) /locus_tag="TcasGA2_TC015681" /gene_synonym="AUGUSTUS-3.0.2_15681" /codon_start=1 /product="hypothetical protein" /protein_id="EFA05496.1" /db_xref="BEETLEBASE:TC015681" /translation="MDQLKGKVVNVVLTIQEGKGMDSIKNLTLISANFNGRILESDPV NAEDCPAFNTNLIWEIEKKDLRKIRSSNQPLRVECLSVDNQNRREKFGHVLLDLRSAQ IVEEPDRQVSFRWHKLLGVRNKKRNCVPELYVSLTIRNHLEVQPQESSDDIWEPEPRA EGSIPIKYLEDGYIVVGDPLKCTEDYSLNIHIKSASSLDLLLPEVLVFHQNNNKYCMC FKIFGIPIKTKQFSKDLHDKIIFEERIVVRLLSNITVLRQFFSEEKFEVGFNCGNDLL GLTTVSFDDLSNLNEKLLLPACFFRLPSPNGIVPVGNDGRKPFLSLEIYLVKNREEVP ALVSNLEPDVSKACGDYTEEAKQQISQQLLLITEEHMKELEEWKERQKVEFEEQLQNL KESELEKDREEIERKKAELNENIIKCKELQEELQEKLDELKLSKTLKKKRKSSTSLVS VIAENQKKFADCDKELLIDYISTLQSDNENLKQIISEQKQELENIEKTALTKEQTTNL LQELKGLEEKFEVAQQTKTYFKEQWQRACQEIHNLKTEDYKQLQNQLRERREELDHLC ILDEPTELVSF" gene 457923..467382 /locus_tag="TcasGA2_TC033421" /old_locus_tag="TcasGA2_TC015009" /old_locus_tag="TcasGA2_TC015010" /gene_synonym="AUGUSTUS-3.0.2_33421" mRNA join(457923..458019,458064..458879,458923..459488, 459538..459674,461965..462869,466543..467108, 467160..467382) /locus_tag="TcasGA2_TC033421" /old_locus_tag="TcasGA2_TC015009" /old_locus_tag="TcasGA2_TC015010" /gene_synonym="AUGUSTUS-3.0.2_33421" /product="hypothetical protein" CDS join(457933..458019,458064..458879,458923..459488, 459538..459674,461965..462869,466543..467108, 467160..467343) /locus_tag="TcasGA2_TC033421" /old_locus_tag="TcasGA2_TC015009" /old_locus_tag="TcasGA2_TC015010" /gene_synonym="AUGUSTUS-3.0.2_33421" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26964.1" /translation="MYRKKVSDDEKNFQNQLHLEKELNALTRQYLVLDRDCTHSQFSK GSSLIKGDKVIAIFQKEHVNVLTDLMRAAAPGREKEDEKLFDELSKLMYENRFYADQV DKHKIYLREIEGEIKIFQKSVHQLREQQTSDKQCEERVWHAMKTVEALENKLETQMKQ FGTLCSKNKELRYEIDHLLWQRRIFLNQWQGLIDKLSDGKKIMLDLIEQATIAYNQRE EWCNKLQILRTKAHHDLRNNIQEMREIRQKYDQSMKLRDFFETKGQRRVMKDLAAKER EKRRRMYEILEEKVTKYHNMLTNIQNFCREKNLKNIAEKFAKQEEFNLSKFKFVIERI QEMESVNDRLGFLYLEIDEGFALHSERDEQQKNKLLELETSLEEMQTAAQESQEKLDE TDSFFQSLLQGISGLFQLCKCVKDPLFRLLGDNTTVQFYNVQLYTQILETRVQEMLII AGYRDKNRKPGDRKKIIDDRNYNNKIYDIDQIVQTTPCSLCVEHEMVSDVMDVLQHVL SRDEAKAKLCERLQLPGGTVRLHTISHSMPRQPLAPLTEEEKFKLHEQQEQELGCLQR QYTLLEKDRDQIACGAKLMRFDRVLSIYQKEHANIETDLEVASAPAKKNQDLKDSNNL SQLIVDHEFYADEVKKERKYIQEIEGQIKNVEKQVTQLRSQQITDKQHEERVWAAITT IDQLMNKLDVQNKKFGVLCAKNRDMKLEIDRMLWERDVFMGIWNKMIDKLVMGKKFMM DLIEQATIAYDQREEWCSKLQALRLKAHHDFILHVQEMRELKRKQDNDKKLEEFFYVK GQKRIMRDLMRKEQFKRMQNKIKLKDRLNEYKKYMNEILEFANEQQVQEIARKYYAQE AENFSLFKRLNNLIQELEFLGDELDTAQTSIDQERELHNARAQQQKNNLQSLENTLQL ATQEVEAAEQELKGVEGYINQMLTGIETLFKICRCNNDPVLQLLGNNATINVYNAFFY LEQVEKAVHEALIAVYSNETKKKLPGAQRTVKDNRTKGELRNVEQFGVSNPCPLCIEY EMVGDVIDSLQHVLTRDQAKAALAERLKSPEMAEKLHNVSACYLPKSREIIQKRYQ" gene 469903..471194 /locus_tag="TcasGA2_TC015011" /gene_synonym="GLEAN_15011" /db_xref="BEETLEBASE:TC015011" mRNA join(469903..470027,470082..470283,470349..470522, 470570..470722,470775..471194) /locus_tag="TcasGA2_TC015011" /gene_synonym="GLEAN_15011" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015011" CDS join(469915..470027,470082..470283,470349..470522, 470570..470722,470775..471146) /locus_tag="TcasGA2_TC015011" /gene_synonym="GLEAN_15011" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04944.2" /db_xref="BEETLEBASE:TC015011" /translation="MAKTEIKKTLNLTFPRLEPYRVVGDFLKSKDELHSVQLPAFQWD KPRQDPDLYLTEARREYVSFVEALGRKREFYKEERKSLDRQWDHLLQQEKDLQENFVK LSSFIKSNEEKRARAIQRCKEDRKLCEERDKDIAKMRENIDLLEHVKEEMDREIRHHI LYEKYLNFVVGETVDFRNAADVIDRFESLMTTKNELGLRQQNYFNLLETAKSQTAKMA DENTFRILGLNTIAAGLRTRYKTAASNSMAWEKIVWSIKKNALQKYKEITEVKLGCRN TYLLMCKRKNETPKISDGDFESQLNYIKKTLQELKTVKGEAETTNKKTFSSMKGEVSK GSK" gene 474253..475198 /locus_tag="TcasGA2_TC015012" /gene_synonym="GLEAN_15012" /db_xref="BEETLEBASE:TC015012" mRNA join(474253..474418,474714..475198) /locus_tag="TcasGA2_TC015012" /gene_synonym="GLEAN_15012" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015012" CDS join(474379..474418,474714..475141) /locus_tag="TcasGA2_TC015012" /gene_synonym="GLEAN_15012" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04945.2" /db_xref="BEETLEBASE:TC015012" /translation="MDPLLAEYPNLVNCEYPFFVKCARAENKTDAYYAFLRTCHASSL VLSVENYSSVTNQPYCRWRVCYVIMSNASASRRLSRGKGNPDQLPKICGAKPINTRIL SKYFRERNVAVVEYGVEAGCNCPKQGFCWTMETPTNPQDLAQLLSSMKIEEND" gene 475328..476326 /locus_tag="TcasGA2_TC015013" /gene_synonym="AUGUSTUS-3.0.2_15013" /db_xref="BEETLEBASE:TC015013" mRNA join(475328..475386,475552..475723,475886..475978, 476148..476326) /locus_tag="TcasGA2_TC015013" /gene_synonym="AUGUSTUS-3.0.2_15013" /product="60S acidic ribosomal protein P2-like Protein" /db_xref="BEETLEBASE:TC015013" CDS join(475552..475723,475886..475978,476148..476221) /locus_tag="TcasGA2_TC015013" /gene_synonym="AUGUSTUS-3.0.2_15013" /codon_start=1 /product="60S acidic ribosomal protein P2-like Protein" /protein_id="EFA04946.1" /db_xref="BEETLEBASE:TC015013" /translation="MRYVAAYLLAVLGGKASPASGDIEKILSSVGIEVDGEKLKKVLG ELNGKSIEDLISQGREKLSSMPVGGAAAAPAAAAAAPAAAEEKKESKKEEKKQESDSE DDDMGFGLFD" gene 477778..503203 /locus_tag="TcasGA2_TC015014" /gene_synonym="AUGUSTUS-3.0.2_15014" /db_xref="BEETLEBASE:TC015014" mRNA join(477778..477991,478264..478670,481896..482160, 484177..484766,487653..488784,492241..493536, 497353..498072,500974..501255,501312..501537, 502378..503203) /locus_tag="TcasGA2_TC015014" /gene_synonym="AUGUSTUS-3.0.2_15014" /product="Clathrin heavy chain-like Protein" /db_xref="BEETLEBASE:TC015014" CDS join(477947..477991,478264..478670,481896..482160, 484177..484766,487653..488784,492241..493536, 497353..498072,500974..501255,501312..501537, 502378..502469) /locus_tag="TcasGA2_TC015014" /gene_synonym="AUGUSTUS-3.0.2_15014" /codon_start=1 /product="Clathrin heavy chain-like Protein" /protein_id="EFA04947.1" /db_xref="BEETLEBASE:TC015014" /translation="MTQQLLPIKFQEHLQLTNVGINVANISFATLTMESDKFICVREK VGDTSQVVIIDMGDTANPIRRPITAESAIMNPASKVIALKGKAGVEAQKTLQIFNIEM KSKMKAHTMSEDVIFWKWISLNTLALVTETSVYHWSMEGDSTPVKMFDRHSSLNGCQI INYRTDPKQNWLLLVGISAQQSRVVGAMQLYSVERKCSQPIEGHAASFATFKMEGNPE PSTLFCFAVRTVQGGKLHIIEVGQSPAGNQPFPKKTVDVFFPPEAQNDFPVAMQVSAK YDVIYLITKYGYIHMYDIESAICIYMNRISSETIFVTAPHESTGGIIGVNRRGQVLSV SVDEDSIIRYVNQVLHNPDLALRIATRNNLAGAEELFVNKFQMLFTNGQYAEAAKVAA NAPKGILRTPATIQMFQQVPTQPGQNSPLLQYFGILLDQGQLNRYESLELCKPVLLQG RKQLLEKWLKEDKLECSEELGDLVKQADSTLALSVYLRANVPAKVIQSFAETGQFQKI VLYAKKVNYTPDYIYLLRSVMRTNPDQGAAFASMLVADEEPLADINQIVDIFMEQNMV QQCTAFLLDALKHNRPTEGHLQTRLLEMNLMSAPQVADAILGNNMFTHYDRAHIAQLC EKAGLLQRALEHYTDLYDIKRAVVHTHLLPMDWLVNFFGTLSVEDSLECLKAMLTANI RQNLQICVQIATKYHEQLTTKALIDLFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQ AACKTGQIKEVERICRESNCYNPESVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYL YRNSLQKYIEIYVQKVNPSRLPVVVGGLLDVDCAEDIIKNLILVVRGQFSTDELVEEV EKRNRLKLLLPWLESRVHEGCVEPATHNALAKIYIDSNNNAERFLKENQWYDSRVVGR YCEKRDPHLACVAYERGQCDRELIAVCNENSLFKSEARYLVRRRDPELWAEVLQESNP YRRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDSSVFSDHRN LQNLLILTAIKADATRVMDYINRLDNYDAPDIANIAINNHLYEEAFAIFKKFDVNTSA IQVLIEQVNNLDRAYEFAERCNEPAVWSQLAKAQLNQGLVKEAIDSYIKADDPSAYMA VVETASKNNSWEDLVRYLQMARKKSRESYIESELIYSYAKTGRLADLEEFISGPNHAD IQKIGDRCFDDKMYDAAKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKE VCFACVDAEEFRLAQMCGMHIVVHADELQDLINYYQDRGYFEELIGLLEAALGLERAH MGMFTELAILYSKYKPAKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEY DNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIQFYLDYKPLLLNDLLLVLAPR MDHTRAVAFFTKTGHLQLVKSYLRSVQNLNNKAINEALNSLLIEEEDFQGLRTSIDAF DNFDNIGLAQKLEKHELTEFRRIAAYLYKGNNRWKQSVELCKKDRLFRDAMEYTAESK NQELAEELLAWFLERKAYDCFAACLYQCYDLLRPDVILELAWRHKIMDLAMPYLIQVT RELTTKVEKLEQSDAQRQSEAAEETHKPMMINEPQLMLTAGPGMGIPPQAYVPPQAYA QPGYAPQMPYGAYPGM" gene 503268..504229 /locus_tag="TcasGA2_TC015015" /gene_synonym="AUGUSTUS-3.0.2_15015" /db_xref="BEETLEBASE:TC015015" mRNA 503268..504229 /locus_tag="TcasGA2_TC015015" /gene_synonym="AUGUSTUS-3.0.2_15015" /product="Uridine diphosphate glucose pyrophosphatase-like Protein" /db_xref="BEETLEBASE:TC015015" CDS 503326..503958 /locus_tag="TcasGA2_TC015015" /gene_synonym="AUGUSTUS-3.0.2_15015" /codon_start=1 /product="Uridine diphosphate glucose pyrophosphatase-like Protein" /protein_id="EFA04948.1" /db_xref="BEETLEBASE:TC015015" /translation="MENLSDVHLTDFIPSIYTTPCTLRYTQNGKPLERGIFAERNGVL IIVYNKTQNALTLVRQFRPSVYLSRIPQGDRVGTIDTGKYPASLGITLEFCAGLEDKT APTEQIAREEILEECGYDVPLEKLEKIATFKNLTETTGARSTMYYCEVTDDMRVAQGG GVDDEIIDVVEMPVEEVLEYAQQGYVNSPMNFMFGLQWFLYHKYKRLGPV" gene 504308..516905 /locus_tag="TcasGA2_TC015016" /gene_synonym="AUGUSTUS-3.0.2_15016" /db_xref="BEETLEBASE:TC015016" mRNA join(504308..504631,504754..504901,504954..505130, 511091..511907,511954..512201,515781..515887, 515968..516333,516420..516905) /locus_tag="TcasGA2_TC015016" /gene_synonym="AUGUSTUS-3.0.2_15016" /product="Band 4.1-like protein 5" /db_xref="BEETLEBASE:TC015016" CDS join(504482..504631,504754..504901,504954..505130, 511091..511907,511954..512201,515781..515887, 515968..516333,516420..516587) /locus_tag="TcasGA2_TC015016" /gene_synonym="AUGUSTUS-3.0.2_15016" /codon_start=1 /product="Band 4.1-like protein 5" /protein_id="EFA04949.2" /db_xref="BEETLEBASE:TC015016" /translation="MFRFLSGRKNRTNTRTNGASEIKPTKLISKNLILCRVILLDGTD LSVELSKKAEARDLYEQVFYSLDLIEKDYFGLQYTDVNHVKHWLDPTKSIKKQIKIGP PYTLRLKVKFYSSEPNNLREELTRYQFFLQLKQDILEGKLECPHQTDVELAALALQSE LGDYDESQHSAATVSEFRFVPNQTEEMEIEILEEFKKLRGLTPAQAELSYLNKAKWLE MYGVDMHTVLGKDGMEYRLGLTPTGILVFEGSQKIGLFFWPKIGKLNFKKKKLTLVVV EDDDQGREQEHTFVFRLHNEKACKHLWKCAVEHHAFFRLRAPVKGPSARQNFFRMGSR FRYSGRTEYQSTHHNKPRRSVQLERRPSQRYGRRQSHVLREKQKQEQANETTEKTAEN NEPSSSRCSVRSNGPESFGKESVGQNSFGKGSIGCNSYSPVLSTGSKNGTLKRNSTPT SPTTPSNDIQLDFLLKSLAKETFSGMQRDEARNEINNKDVKDDEPKNVAKPLPPGQLK CNVLKAKLEEGTKLTNQMFVAAVNNDEANLNSLNAATFVSVGGDKLTLSVTGPASNPI LNNDDKKRCATPVTVTFFGHNDSGKLEKVMLNNHEKQPLSLLSTDSQVSDSESTASTN NSNPFATYLTDNSTNPFQGLNPFLTNNPFRNEDEKDEEKSEVDESIKSVDEDNNVKTP TTVTPPLSKLSPWLVSQEVVSSPVSKVNTTETTIIRKSVITTQL" assembly_gap 510329..510518 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(517797..518429) /locus_tag="TcasGA2_TC033422" /gene_synonym="AUGUSTUS-3.0.2_33422" mRNA complement(517797..518429) /locus_tag="TcasGA2_TC033422" /gene_synonym="AUGUSTUS-3.0.2_33422" /product="hypothetical protein" CDS complement(517974..518129) /locus_tag="TcasGA2_TC033422" /gene_synonym="AUGUSTUS-3.0.2_33422" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26965.1" /translation="MTDFRIIVVSVVFTLDTGEDTTSWDTSHGDNLLKGGVTVVGVFT LLSSSTL" assembly_gap 520417..520417 /estimated_length=1 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(520462..530795) /locus_tag="TcasGA2_TC015680" /gene_synonym="GLEAN_15680" /db_xref="BEETLEBASE:TC015680" mRNA complement(join(520462..520994,521039..521201, 521252..521481,521531..521618,523659..523872, 523927..524334,526040..526436,529416..530638, 530685..530795)) /locus_tag="TcasGA2_TC015680" /gene_synonym="GLEAN_15680" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015680" CDS complement(join(520739..520994,521039..521201, 521252..521481,521531..521618,523659..523872, 523927..524334,526040..526436,529416..530638, 530685..530711)) /locus_tag="TcasGA2_TC015680" /gene_synonym="GLEAN_15680" /codon_start=1 /product="hypothetical protein" /protein_id="EFA05495.2" /db_xref="BEETLEBASE:TC015680" /translation="MGLYQLEEQPPIVKAIFAGCEPEKYKELIKSKQDVNCLDSKKRT PLHAAAFTGDAAIASVLLSNGARVNAKDTKWLTPLHQACYIRSSETVSILLNNNADVN ARDKLWQTPLHVAAANGAYKCIEQLLNHVPNPNVTDRGGRTALHLAAYSEMADCVELL ISGGCIVNAYDKKDCRPLHRAVQVGSLSIIELLLKYKAEINAKDRNQYTPLHVAAAGG TDAVCRLLISHGADVNAQNVFGNTPLHIACLNGHHLVCQELINSGADIEAVNYRGQTP LHIAAVSTNGVDCMMLLLTQKVDINRQSLDGRTPLHMTAIHGRFTRSKILIDKGATID CPDKNDCTPLHIAARYGHDLLTNTLLSYGANPSQRGYEGRQPLHMCCLAGYVECCRKL LQAGVDLNAVDDSGKTPTHCAAYKGSVECLDLLVSNGAKFQLKDNIGRLPLHYAASQG HYQCVFTLVGIGSSTNAVDMEGCTPLHLACGYDTEGKCIEYLLEHKSDPFVKDRRGFT PIHYALAGGNIAGVSRLLGVINNSMIFQEPDMPDVTPLHLAAKLGNINVMRAILSYYH DVNLQTEQGLTPLILAAREGHVQCVNILLRFGAKVALCDNVNGMTAVHYSAKNGHSQS LTLLLHNSEDKNVIDMHDGFKRTALMLAVSGNHIECVQTLLKCGADPNIVDDDKHSCL FRAVVTGQNSMVQLLLSNNAKADSLDIYGKSVLHLAAACGHLVCLQTIVGYLTEKDTA VLDNQQCSALHWACYNGNANCLEFLLENNVCEKMEGNPFSAAHCAAFAGSERCLELLL HKFGPEITQLRDTRDRTPLHIAALHGHVECAKLIVEKGGDVKSCDEDGRTPLIAAAQY GQVAFVEYLLGCSGIDRTASDKQGNTALHWACYRKYNNIALLLLENDDVGFVNLANND GKTALHLSSRNGLVDVTRELLQKGASVSAVDNEGLTPALCCAPNMNVAQCLALILENL PEFQLSKDGFRRQYNGHSTALDFHIHYEQ" assembly_gap 524389..525997 /estimated_length=1609 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(532093..533740) /locus_tag="TcasGA2_TC015679" /gene_synonym="AUGUSTUS-3.0.2_15679" /db_xref="BEETLEBASE:TC015679" mRNA complement(join(532093..532207,532253..532454, 532504..532647,532693..533311,533361..533524, 533568..533740)) /locus_tag="TcasGA2_TC015679" /gene_synonym="AUGUSTUS-3.0.2_15679" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015679" CDS complement(join(532143..532207,532253..532454, 532504..532647,532693..533311,533361..533524, 533568..533690)) /locus_tag="TcasGA2_TC015679" /gene_synonym="AUGUSTUS-3.0.2_15679" /codon_start=1 /product="hypothetical protein" /protein_id="EFA05494.1" /db_xref="BEETLEBASE:TC015679" /translation="MAHRNGHCLYDHNHNLQIFNKNGFIENRCLNINVTESAEYIHMK VRDISDFVFNYTSHIDLRHFELMRSEQCLDIDFNEFRSNLIDMFQQVHTHDMFLKCEI DHNQGKLVFYGKSKIKSIVFLTIDLQITNQKEIFNEMNNNILELQTANKNLTSQLQLS KTRLRDKDSEIEKFILINKQLEKRFLKDLQHLNCVFNTKLQECSSLLITKILALTQKL LKLYQDVEIVKAESLLKSDSSARLLQSMENLRLESIETSKIVNELKRENCNLKSTQLS NEKMIADLNNTLQNREAEFRELKKQRDEFEKDVKQATLIIAQKTTANEELARDVVKAN QMLVNFNHLLDTKNQEIDELKNSISRQEKIMQEQNHRFHELCKEFEDYKAEFNAERIN KLSHELFTANKKVEDVEKVNRETAKLNELLTRKLASVDFPRRNFLS" gene complement(535665..>557025) /locus_tag="TcasGA2_TC033425" /old_locus_tag="TcasGA2_TC015677" /old_locus_tag="TcasGA2_TC015678" /gene_synonym="AUGUSTUS-3.0.2_33425" mRNA complement(join(535665..536381,539122..539941, 539989..540243,540292..540603,543593..544069, 544122..544360,544419..544580,547473..547567, 547628..547686,547958..548041,548097..548227, 552105..552779,552828..552894,556844..>557025)) /locus_tag="TcasGA2_TC033425" /old_locus_tag="TcasGA2_TC015677" /old_locus_tag="TcasGA2_TC015678" /gene_synonym="AUGUSTUS-3.0.2_33425" /product="hypothetical protein" CDS complement(join(536040..536381,539122..539941, 539989..540243,540292..540603,543593..544069, 544122..544360,544419..544580,547473..547567, 547628..547686,547958..548041,548097..548227, 552105..552779,552828..552894,556844..>557025)) /locus_tag="TcasGA2_TC033425" /old_locus_tag="TcasGA2_TC015677" /old_locus_tag="TcasGA2_TC015678" /gene_synonym="AUGUSTUS-3.0.2_33425" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26966.1" /translation="IDPPPNSGHNARNSNNRLMADDGSSDDANTPLQSPRSQNTSREE DDSSNANESECKSPSQRTKSNQRWMKLRTTVQISSAMQKKPPLKREDSFLKRFSSRQI PETQETVEDTGSEGPGGDSHSAPRRRRRPRKQPRSVVNPDENFYFYWLLVLTVCVLYN MWTLIVRQSFPELQSMVSNFWLSCDSLSDLVFILDLIVQLRTGYLEQGLMVYDSKKLA CHYLRSRAFLLDLAALCPLDLLQIRLGPQPLLRCPRFLKVYRAVNYYYMVESRTVWPN LWRVVNLIHILLILAHWFGCFYFLLSEAEGFQGDWVYPYRPGDYATLTRKYLGSLYWS TLTLTTIGDLPTPETNAEKTDSVDGPRSLPRRGVKSRLLQFNTNNGYIFTIVSYLIGV FIFATIVGQVGNVITNRNANRLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSR GRIQGGGDINTALGLLPDKLKTELALHVNLSVLKKVTIFQECQPEFLRDLVLKMKAYI FTPGDSICRKGEVAREMFIIADGILEVISENGKVLTTMKAGDFFGEIGILNLDGLNKR TADVRSVGYSELFSLSREDVLAAMKDYPEAQEILQALGRKRLMEVKASARNPPHHKEH HHHGIPHVPDPKGLVDKIKNEAKGLRNALKKSRTHRKSDESLELQPLHTPTNNNNKGT LKRMSRVKSHDLSQEENEKKEVSAEPVTSPLGAGLPLLHRLRLLKEKQENEERAKSAT PPILSPSSSSIKSPPPIPEDTNEPIGAGLPLLQRILMLKGKEGTIKEEKPKLSRASSV ASNPTSPTPQTSVSRGSFSSKITSNKLSFRERLKFHSSAPKDDVKEPSISASDSVSDA DKSEPPWSKLKKAAISRDPSDPSTSAPPSKDTATLTEQVQQNPKPKLVLTGRTKHYRS IDDLSPEYGGLPFVKKLKILNERQKLEELETVMKTRSFSLDIPDSSQTPMEMDTLTRS QSEGSTMHHDKNLLATPLSELNSSNESNETPERRNLRSILKKLSEETQLESQVATMPK KIDSTEFRKLMRAPTIEGYAARHSKLAKSVTFNRDTLQSPPNSAVMIGSPNLFTFVNS PSEKNETAVDHKNGVQIVNKPNNQVKLIKNTLDDEQQYFADILLAIKQVMSAHLQELQ EKFYQRFERLEEEVRSKDEIINQLKAHIWELEKSAEESIGDSFETVISREHQSWEEPT NEEAEELQELPQHPLTPMHSWRPPQNTVLDIDSTTDTEGDSSEQSGDYENYSNNWEIE MLAAQMREKRSASLDYNTARPLRKRFTRGGSADARND" gene complement(587498..606000) /locus_tag="TcasGA2_TC015676" /gene_synonym="AUGUSTUS-3.0.2_15676" /db_xref="BEETLEBASE:TC015676" mRNA complement(join(587498..588544,594832..595063, 605814..606000)) /locus_tag="TcasGA2_TC015676" /gene_synonym="AUGUSTUS-3.0.2_15676" /product="Sodium/potassium-transporting ATPase subunit beta-1-like Protein" /db_xref="BEETLEBASE:TC015676" CDS complement(join(587554..588544,594832..594902)) /locus_tag="TcasGA2_TC015676" /gene_synonym="AUGUSTUS-3.0.2_15676" /codon_start=1 /product="Sodium/potassium-transporting ATPase subunit beta-1-like Protein" /protein_id="EFA05491.2" /db_xref="BEETLEBASE:TC015676" /translation="MGQRRLRHISTRLHWRYPQVQLFSTYCAYLPVIINPVTTMTEKL NPKVQEFQFHSIPKTTKWESFQKVIYDPSTHEIFGRTKKSWYQLLVFYSIFYICLAAL FAICMKGLTATLSDKEPKWKLEESLIGTSPGLGFRPISNNTQEGSLIWYNLKDVQTTQ KWVRLVDQFLQPYKVQQIGKNYQQCDYEIAVKEGHVCAVEVDKFGPCTAENNYGFNST SPCVFLKLNRIFGWVPDYVTQPESEMPDDLKEIITYATSNNKSQVWISCAGENPFDRE HVIGFDYFPSRGFPGYYFPYTNNDNYLSPLIAVQINVKTNVIVNIECRAWARNIAYDG GNNHREGSVHFEILVDSKN" gene 605601..606098 /locus_tag="TcasGA2_TC015017" /gene_synonym="GLEAN_15017" /db_xref="BEETLEBASE:TC015017" mRNA join(605601..605630,605937..606098) /locus_tag="TcasGA2_TC015017" /gene_synonym="GLEAN_15017" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015017" CDS join(605601..605630,605937..606098) /locus_tag="TcasGA2_TC015017" /gene_synonym="GLEAN_15017" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04950.1" /db_xref="BEETLEBASE:TC015017" /translation="MAIQKMPTRVRKTRTPVRTVAATERVSRFHPSYAIGNRRAHASV PDDIVSVEKNRRENKREEV" gene 608652..612154 /locus_tag="TcasGA2_TC030128" /gene_synonym="AUGUSTUS-3.0.2_30128" /note="gustatory receptor 28" /db_xref="BEETLEBASE:TC030128" mRNA join(608652..608854,608905..609378,609424..609521, 611538..611708,611755..611826,611879..611968, 612017..612154) /locus_tag="TcasGA2_TC030128" /gene_synonym="AUGUSTUS-3.0.2_30128" /product="gustatory receptor 28" /db_xref="BEETLEBASE:TC030128" CDS join(608668..608854,608905..609378,609424..609521, 611538..611708,611755..611826,611879..611968, 612017..612085) /locus_tag="TcasGA2_TC030128" /gene_synonym="AUGUSTUS-3.0.2_30128" /codon_start=1 /product="gustatory receptor 28" /protein_id="EFA05761.1" /db_xref="BEETLEBASE:TC030128" /translation="MTSSKPLLINPNLFKTLRPLIKLSRIFGLCPITYKNSDKCLNLR IKWSWSLYILQLIAVTVITSWAIWGFIRDMQIAEFLNLGFTSAIDLYIAIFDVNEIII TGFIFVAIIPSTFKHLPEIIDNFNKIDDTNPQLPTNKIHRKILFLLSFVLVYMTVAYT CDLIMWSQDLLVGFIHDLPYYILYSVVVIHEVQYWFLVTLIRLRMSAMNGLVAETLNR NTDISSQEVCLLVETHSNILEAVSTVNRCFSGPTAIILLSCYLHLVVCPYILYVVASS DNGLFCNTVYFLWISVHFSRLLVIIEVCNNCENECHKTRNLIFKLLANTSKKGDVRRE LKLFAYKNVGKKVRFSSYAVPKINRKLLISIATSISSYWMILYQFGASTTGL" gene 613117..619182 /locus_tag="TcasGA2_TC034741" /gene_synonym="AUGUSTUS-3.0.2_34741" mRNA join(613117..613315,613463..613583,613634..614070, 615957..616724,618276..618893,618943..619182) /locus_tag="TcasGA2_TC034741" /gene_synonym="AUGUSTUS-3.0.2_34741" /product="hypothetical protein" CDS join(613479..613583,613634..614070,615957..616724, 618276..618893,618943..619069) /locus_tag="TcasGA2_TC034741" /gene_synonym="AUGUSTUS-3.0.2_34741" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26967.1" /translation="MSESNLQLDENSTHFIYGDQEYILDQGAVNPELRDLICNEGPKA ILVDGQYILTDSSTILLQGGDTNLTQFYINDESEAGFVVEGENSSVNNLFENAECVQL VEEDTNDVQQIIYYTNEELSNEAFTSVQDLTEESDIQGIQDEDGNIYPFKRIKLEGQM LNFDEFVDKQTNNGEESADEHVQFAVLEDQSELNNVEGTSDNDSNAKTSENEIFDLSK ITGRNLITGQTVTLHTYMEKLKKRLNKNNTLRKTPGRKIYNDEVRKPEFTDLVDKKIM IGKTKTGKKIVGKIISIDRKSSSPTPEPPEADCEINEKEDTVEESPPETADTTTTQVI IKKSVVAKESFEQICKTLSGVMEMESVRKKLENKNLVVKLVEKKYVNESASYVKNTSH SYGFMEKEVEDGEEKWRFVPDLETQEVLLGENETGDGEDEEKKMPRFSITTSLTILVT YEKGGAKTVRVNLNPAPGNLCTVCAQYFKTKLQLRQHMNNVHNTYGNNSTCKACGQSF DDPRTFQEHCEMHVEEGKLFNCSECDQYFPTVTKLKKHFAVHDVYLRPLECSVCEMRC SNETALKKHLVTHTGVKPYTCDVCSKQFMTQYDVNFHRKIHFPDKHFACNVCFRTFSR HSNLLRHAEIHKGTGALYKCDICYCSFNYISSLTRHVVQNHIDADKLKESDNDKGEEA EK" gene complement(621163..622784) /locus_tag="TcasGA2_TC015675" /gene_synonym="AUGUSTUS-3.0.2_15675" /db_xref="BEETLEBASE:TC015675" mRNA complement(join(621163..622387,622434..622784)) /locus_tag="TcasGA2_TC015675" /gene_synonym="AUGUSTUS-3.0.2_15675" /product="Lethal(2)neighbour of tid protein-like Protein" /db_xref="BEETLEBASE:TC015675" CDS complement(join(621261..622387,622434..622683)) /locus_tag="TcasGA2_TC015675" /gene_synonym="AUGUSTUS-3.0.2_15675" /codon_start=1 /product="Lethal(2)neighbour of tid protein-like Protein" /protein_id="EFA05490.1" /db_xref="BEETLEBASE:TC015675" /translation="MAPTKNKPPKSGLNPGFFTMENLKKFIYDPHYLKPTCFLLFLFE IILNIFIIERVNYTEIDWKAYMQEVEGFMNGTWDYKELKGDTGPLVYPAGFVYVYSLL YAVTSQGRNIYLAQYIFLVLYLGQTLLTYRIFLKTAKIPPYALVLTTLTSYRIHSIYV LRLFNDPIAVLLFYISLNLFISNRWLIGSFFYSLAVSIKMNILLYAPCLLIAYLTNLT LMETILNLSICALVQVILGAPFLYTNPFSYIKGSFDLGRVFEHTWTVNYRFLPREIFE NRLLHLGLLSCHVLLLLAFAPLLKRYLSSYAKLKIVTDQVRTQLIDEKLKRQKEDEQM SQEQRAFLASFEKQIKGGKTREDNESKLEDKLSKVTQLFVLPFFVTNLIGIVFARSLH YQFYCWYFHSLLYLVFCTGFRRPVMFLLLGVLEYCWNVYPSTDLSSASLHLCHFVLLF GVYRTMRQ" gene complement(625083..634044) /locus_tag="TcasGA2_TC015674" /gene_synonym="AUGUSTUS-3.0.2_15674" /db_xref="BEETLEBASE:TC015674" mRNA complement(join(625083..625497,625551..625959, 626011..626350,626397..626516,626572..626790, 628852..629032,629083..629182,629230..629834, 633557..633660,633915..634044)) /locus_tag="TcasGA2_TC015674" /gene_synonym="AUGUSTUS-3.0.2_15674" /product="Two pore calcium channel protein 1-like Protein" /db_xref="BEETLEBASE:TC015674" CDS complement(join(625321..625497,625551..625959, 626011..626350,626397..626516,626572..626790, 628852..629032,629083..629182,629230..629834, 633557..633660,633915..634005)) /locus_tag="TcasGA2_TC015674" /gene_synonym="AUGUSTUS-3.0.2_15674" /codon_start=1 /product="Two pore calcium channel protein 1-like Protein" /protein_id="EFA05489.1" /db_xref="BEETLEBASE:TC015674" /translation="MAAPRESPDDDGYKRFTEDSHNVSYGSNSTNPIDEMGSRSSLSR ETTETVDHWEMNYHEAAIFLEEGENNEKFDSHPRHPSALPAYLLVHNSWYYGLDLTFS IVLLLLALAENPSVDKFQLPVGIHTTLELVSLGVIGVELALKLRWIGWTMILKHKRTM VKGITLFIMVLEAIIVLVRQESHFRVTRALRPIFLVDTRACGAVRRFIRQILQSLPPI LDMLVLLMFFVCSYALLGYFLFSNHQTNLYFRTLGDSFVSMFVLLTTANFPDVMMPSY AISKWNAIFFISYISIVLYVLMNLMLAVVYETFTGIEKDKFRKLLLHKRKACQLAFRL LVSKQTPNMVRFKQFHGLMRYYSPRTSQRDIILIFRQLNTSGTGALTEDEFLGIYDAG TLKWRLKDPPDPWFSAAWPPLRIFCRAARTVVTWEYFEHIVYVLIIGNGLAMFIRVLE SSVSLEEGAKNFCASWDTYLFLTLFLIEALLRIVGLGWGEYISSGWNFFDLTVTLVAL IGSLILLVRPKLTVVVILRPLRLLRLFKLKKRYRDIFGTLVLLSPLMWSTAIVMMVMY YFFAIIGMELFSQYDLRNCCNGTTVEDFYKYSTNSSSGIGYYYLNNFSNLLISGVTLF ELTVVNNWFIVMDAYANVAHSYSRIFFMLFYLFTMVVLTIVVASVLEAFRFRIQYKKQ TSKRDEEQMLHEEVAVDWNSLQRQVQDPKILEALQLDFVPGGVSFYIGRRRRTRDVLQ RHMYISEIAQWLQDAEEQERITGINLVDESQINTRLMHSEA" gene complement(637428..646748) /locus_tag="TcasGA2_TC030909" /old_locus_tag="TcasGA2_TC015672" /old_locus_tag="TcasGA2_TC015673" /gene_synonym="AUGUSTUS-3.0.2_30909" mRNA complement(join(637428..638499,645516..646748)) /locus_tag="TcasGA2_TC030909" /old_locus_tag="TcasGA2_TC015672" /old_locus_tag="TcasGA2_TC015673" /gene_synonym="AUGUSTUS-3.0.2_30909" /product="Peptidylprolyl isomerase domain and WD repeat-containing protein 1-like Protein" CDS complement(join(637784..638499,645516..646602)) /locus_tag="TcasGA2_TC030909" /old_locus_tag="TcasGA2_TC015672" /old_locus_tag="TcasGA2_TC015673" /gene_synonym="AUGUSTUS-3.0.2_30909" /codon_start=1 /product="Peptidylprolyl isomerase domain and WD repeat-containing protein 1-like Protein" /protein_id="KYB26968.1" /translation="MSDSEVGPTASAAPQPKKRRRLSHENLYLDNLPSAESYEKSYMH RDTITHVVVSATDFLITASCDGHIKFWKKVETGIEFVKHFRSHLGPITSIACNVEGTL FCSASSDKSLKIFDVVNFDMINMMKLDFAPNQVEWVHGPGDPVHSLAVTDSDSPKIHV FDGRSDNKPLKVLEKIHTQPVVLVKYNPKYDVAVSVDKTGILEYWSGLKQDCTFPKNV KFDSKLDTDLFEFAKHKTTVTGLAFAPDGARFATLSTDRKVRVFNFVTGKLVRVLDET LPRFTELQQATQQLPNMEFGRRMAVERDLEKSEAVVLANIVFDYSGHFIMYATLLGIK LVNLYTNKCVRIIGKNENLRLLNIALYQGSAKKSKAAVTLEIEASTNPTLDAIQPDPT LICTAYKKSRFYLFSRREPDELQGDQDRDVFNEKPSKEDTFAATDNPAVQRLYENAVI HTVFGDIHIKLFMKETPKTVENFCVHAKNGYFNGHIFHRVIKGFMIQTGDPTGNGTGG ESIWGGEFEDEIRPNLRHDRPYTVSMANAGPNTNGSQFFITLTPTPWLDNKHTVFGRV VKGMEVVQNISNVKTNAKTDKPYDDIRIVSVTVK" assembly_gap 640557..640681 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 641010..642503 /locus_tag="TcasGA2_TC015020" /gene_synonym="AUGUSTUS-3.0.2_15020" /db_xref="BEETLEBASE:TC015020" mRNA join(641010..641043,641698..642503) /locus_tag="TcasGA2_TC015020" /gene_synonym="AUGUSTUS-3.0.2_15020" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015020" CDS 641726..642463 /locus_tag="TcasGA2_TC015020" /gene_synonym="AUGUSTUS-3.0.2_15020" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04952.1" /db_xref="BEETLEBASE:TC015020" /translation="MVDESVIFEIQVEKKVLEQVFHENKHLKDSYDKLIKNEDVIKSY KDEIKNLTNKTQTLQQTNQTLSEENAKLKTKIEELLKTDNTKQLKERLMKTQEENRKL DQDKLDLEFQVKNLTRKLRLEEEKEKSNDLAQVECKLLKLKLHAIENEKNYLISDFER ERKIITKQNKPRVQKLEENLRHLRKWIEKESRERRPRDTDQVKALKAQIATLENDKID LIEGFELERKVFRKILKDNGHTNNHLS" assembly_gap 644510..645208 /estimated_length=699 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 647158..647448 /estimated_length=291 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 649527..654091 /locus_tag="TcasGA2_TC015021" /gene_synonym="AUGUSTUS-3.0.2_15021" /db_xref="BEETLEBASE:TC015021" mRNA join(649527..649725,649778..653841,653889..654091) /locus_tag="TcasGA2_TC015021" /gene_synonym="AUGUSTUS-3.0.2_15021" /product="hypothetical protein" /db_xref="BEETLEBASE:TC015021" CDS join(649584..649725,649778..653841,653889..653912) /locus_tag="TcasGA2_TC015021" /gene_synonym="AUGUSTUS-3.0.2_15021" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04953.2" /db_xref="BEETLEBASE:TC015021" /translation="MFKKLKEKITEEVKSSPQRFQQLTQSVSDRLQNSSTSDENFFSI AEDDATPSNSSFESGFTNVSLVSPQENKMRRNSNSSIASDVSFLPRYESFANMYHLQS DLDISASEIEDNASNSSQLGHLSKEQIYSAFQKAQMRYHKYRGRYTDLAKHYKDLERE NAKMKSVLVETQDKAIRRVTELKEQCALEQKAKAHLESALRDEIDEKQFKIESLQTKI ELLQTPETENPDTLNKYLTDARVEIENLNQRIQEMKANSIIFQTKEQEYKAKITNLEK EIALFSEREKENNLSLAQNKMELHNELLSKDAEISNLKKSLEALTGGTGKFENLQTQN TKLIEKLEALTQKCNNYENKLLKMEQLRRENEENSRLKKEIQDIQGQLEGVREEAKKS LLSLETKIREKLAKEFEEKEERLRSDFRKKIEEVSSSSSNEFNLLEMEEEIRKLRQVN DGILEQLTSKTTKYDDLERNHLELIEESGRLRSQIGGLEKELATLQNTNQAANLKLGH LEANARVLERTVEEYKRLEAERDDLLQEKKNFMEDLEEERRINERLNLEVEQLRDEMV KKSDLEHSLEEERKVTQKLNTELENVKCHIEEKKKDLELTLDEEKGKLLQKLEESSVN MKHLEDTGLALSEELNSLKLKNEELAKLAEERDTLLKKLTESEETNSLQTRKIQNLEE EMAKKAVSLEEAKRKILELGEQNNSLGHNLEEERNVNQKLHSDLEHMKRHIEEKKKHL ELSLDEERAKLLQNLEESSKTMKHLEETSLALTEELNELKIRNEELAKVAEERDTLLK KLTESEENNSLQALQIQNLEEEMVKTVQTLEETKRKIQELEEKNNSLQHSLEEERNVN QKLTTELEHVKRHIEEKKKDLESTLDEERAKLLQKLEESSKTMKHLEETGFALTEELN ELKINNAKVAEERDTLVKKLTDSEETNSLQTLKIQNLEEEMRNLFASLENERKNSIKA GEELEEKEANLKKLKMLLEDKENDFVRQLDEKESRLKKIEEMEEEISSLKKLLDEANN NLAVKNHQIEIYEADLKTKNGQIEALSRKIEEYNDLIEERNEGFFKILSNFSEPLNNV RRNKDNKHLYNLEQKLQNFEQTFSLERENLAKILIYLKQFEEKHSALEEEKEELLRQI TELRKQIVEVNSAQSYVKQFEEEILRLREENVRLMEEQEKFKQNVLELESRNTQVVSD SNFLSEENHGLLTEIEELKLKNEEYETKHKNLLSQIENLERESNQSQLAELEKHLTEL QHEKQLLLEEIDELKTTPINAANKSEDYVKEIENLRTKIVQYKSLDLTNRSSIEFYEN ELQKLKNQNEKLNRKLDETLVTLNHCSELSNSTEIEYLKNVLYNYMLGKESMVLARVI AAVCKFDPQQTELILAKEQQKQTLLGQLGIL" gene 654600..660102 /locus_tag="TcasGA2_TC015022" /gene_synonym="AUGUSTUS-3.0.2_15022" /db_xref="BEETLEBASE:TC015022" mRNA join(654600..654646,656383..657294,657386..657508, 659526..659740,659801..660102) /locus_tag="TcasGA2_TC015022" /gene_synonym="AUGUSTUS-3.0.2_15022" /product="NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like Protein" /db_xref="BEETLEBASE:TC015022" gene complement(656435..657108) /locus_tag="TcasGA2_TC015671" /gene_synonym="AUGUSTUS-3.0.2_15671" /db_xref="BEETLEBASE:TC015671" mRNA complement(656435..657108) /locus_tag="TcasGA2_TC015671" /gene_synonym="AUGUSTUS-3.0.2_15671" /product="Actin-related protein 2/3 complex subunit 4-like Protein" /db_xref="BEETLEBASE:TC015671" CDS complement(656567..657073) /locus_tag="TcasGA2_TC015671" /gene_synonym="AUGUSTUS-3.0.2_15671" /codon_start=1 /product="Actin-related protein 2/3 complex subunit 4-like Protein" /protein_id="EFA05486.1" /db_xref="BEETLEBASE:TC015671" /translation="MSATLRPYLTAVRHTLTAAMCLENFSSQVVERHNKPEVEVRSSK ELLLTPVVISRNEKEKVFIETSVNSVRISIAVKQADEIEKILCKKFMRFMMMRAENFV VLRRKPIEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEVSEMKLAVNARARIV SEEFLKRF" CDS join(657255..657294,657386..657508,659526..659740, 659801..660061) /locus_tag="TcasGA2_TC015022" /gene_synonym="AUGUSTUS-3.0.2_15022" /note="accepted without modification" /codon_start=1 /product="NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like Protein" /protein_id="EFA05672.1" /db_xref="BEETLEBASE:TC015022" /translation="MSGALKLYSLSRSVSGRPSIFLRACGQNRLKSTSKGDYINVNPG EPGMSLNEVTDRAAEKVFFTELVRGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHA LRRYPSGEERCIACKLCEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQE ACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWESEIAANIHADHLYR" assembly_gap 660260..661051 /estimated_length=792 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(661202..678998) /locus_tag="TcasGA2_TC015670" /gene_synonym="AUGUSTUS-3.0.2_15670" /note="serine protease H164" /db_xref="BEETLEBASE:TC015670" mRNA complement(join(661202..661571,661622..661773, 663471..663739,663966..664874,668737..669131, 672604..673283,678942..678998)) /locus_tag="TcasGA2_TC015670" /gene_synonym="AUGUSTUS-3.0.2_15670" /product="serine protease H164" /db_xref="BEETLEBASE:TC015670" CDS complement(join(661389..661571,661622..661773, 663471..663739,663966..664874,668737..669131, 672604..673275)) /locus_tag="TcasGA2_TC015670" /gene_synonym="AUGUSTUS-3.0.2_15670" /note="accepted without modification" /codon_start=1 /product="serine protease H164" /protein_id="EFA05743.2" /db_xref="BEETLEBASE:TC015670" /translation="MSPLSLVGIILVTLSPSLADVSHVLDGSAHPPDPQAVNHLATPE QYWWMNSNSPLKAAYDYYKKCNAKGNCITPINPDAAPQPFQPQPHPQPLDVKHNPFLN GKYNPQENTAKLNEGGNIDIAKNPFLSGKVVTSGGGDAVVKGQDGFLGVQPAQPFKKP GFATTHPLDAKKKPGFATTHPLEKTSKKTGVECKGAGFGCVEKKLCVNGVVNKNGEGL LQTRSDVHYCTDEEVCCQLNNLNEITQGKSSVPGSTIKFAGGAGFSPGFIHVQPLNVQ PDIVFAGEHGHHSSSSTSKSIRDTSLSPNSVFSSTVDYSDTKFDSDVRFASTFQGPAY LPPVAPTTPKPKPFEQSSIDNHPQPPYRPSPSIPQPSPQPRPRPTSPPFRPTPSIPQF PSPSTPQYTPAPPQPQQPTGGYEYPKPTPTFGYPTPRPGGSSSNVNNQYVPPPKKPTE GDQSSDAANLDGTILRPTTPRAQFQGELNTAPPPGCAAALKCVQEIYCTAEGVISPVP VVLTKEQELSRVPTTVCQDTESGIIGKCCRDPNYKDPWPSANLVNGVDDGQYKEDDSI GQYSPDLQRNVRSETGGPRQDASNINVNVQQPQPKCGERHPNTSPKGPGPLDVNFAEI PWQAMVLRDSNRSLLCGGAIIRRNAVITAAHCVEGLETSDILVKGGEWKLGIDEEPLP FQIVKVAVVVRHPQYQPGSFVNDLALLVLEEKLRPSKNIGTLCLPPPNQIPTENCIAT GWGKRILQLHAKGAIMHSINVNVMDNQQCQETLKSKFQHAVGNHSPNTLCGYSDIDQC KVDYGSAMACYKDGGYTLSGIYAWDTGCKQEGQIGGYVAPDVDWIESTLAKPITELKK LEH" assembly_gap 664907..668673 /estimated_length=3767 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 693073..693734 /estimated_length=662 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 695247..714234 /locus_tag="TcasGA2_TC015023" /gene_synonym="AUGUSTUS-3.0.2_15023" /db_xref="BEETLEBASE:TC015023" mRNA join(695247..695310,695355..695442,696009..696064, 699407..699497,699545..699651,706363..706879, 709060..709193,709248..710226,710275..710437, 710490..714234) /locus_tag="TcasGA2_TC015023" /gene_synonym="AUGUSTUS-3.0.2_15023" /product="hypothetical protein" /note="transcript variant 2" /db_xref="BEETLEBASE:TC015023" CDS join(695261..695310,695355..695442,696009..696064, 699407..699497,699545..699651,706363..706879, 709060..709193,709248..710226,710275..710437, 710490..714049) /locus_tag="TcasGA2_TC015023" /gene_synonym="AUGUSTUS-3.0.2_15023" /note="transcript variant 2" /codon_start=1 /product="hypothetical protein" /protein_id="KYB26969.1" /db_xref="BEETLEBASE:TC015023" /translation="MRPTFPHAGNLFASSSYVVLTTLKYLRKNRANRVTIAPIQPSSV SNKDPGKPSTKPPKRVQTPHRTGVRTPNGETKSPWFRSPKPSKNNNIRDVQIRSISAS APSLNNNNENKKSSKRPLTFAEGNVTLRRGQQTSKIETAATTPDDLSRSSSITNLNAD PKAKGAKPKKAESKDKLDKVADKKNDKKAVNKNNNKESEGSTDSEVETLQKQLAQMAN DKTNLALQLGEQNGHIHKLQEEVKQLKMMHQEAEIKVEQLMDENSVLRKQLRDVANSP LSDNEKQQILYETHRQHSSAPASIATNLLDDGGDITACPTPEWDKHSSSNVSEVSVAC LQDKIHQMQETHYSTNEELQATLQELTDLQKQLTELQQENLRLSDEKNLMFESLCRQT ERLNDSRNEVESLKQLLYNDENGQFETAAEREQKLVDLLKKAQEEREALLVKQEQLGN ELEDARSGNLIQNKEIGQLSERVKTLESTLDAKHAEHKQLDQELAQAKDQSSSRQIEI NRLKDLLENARTKINELEQDRALSDKSELDELLDNARKEKDALESEVAHLKEQLALSK NETEKLKEQVSILQEECKVTRNNAKTTQSDLEYKLEKLQAEKIALTQQLQEFQDAVNE LQVQAQCQAEDKRQLSAVLSETQRNLNESERKIADLESELAELKRIKADQEEEWEKFQ KDLLTSVRVANDFKTEAQQDLEKLVMENKAGRDRIKQLEAQIEKLKGSRRKSNQFEDK IASLNRRYKQIEGLTDEQLTEEQRAVKDLKRHYERDLPRRKPIANKPKDKLAISKPCL GSVVANPKLQKFVQDSTLREVQFEPEVQFESKVQFESKTQYKSEVQFGPEVQKESEVQ NRIFERDVQSEIFEACEPIYEGHVRSKSLTDLPEVEPRLRRYGSIENLLDLTKPRVKK PRKKSTVTFDTLDKICRDIDTNTPEDELSNEQKFALRLREVLNKEPKKIPVRKLSKSG RKKLVISRPTEESVKKNEKLRRIINDPVIKNVGPENRVVRRSKAVRRDKGRYSAPVAP PRPGGSLKMTKSKSHNDIHFKFQVPDMYSGKEESVKFPVLPPEEFRDPVPSTAADNSA FRTFHVEKNMFKREDNYLDEDLRKAFTEERIPNEDQMKNEELDDQVAGNNTFKREHIF LDEENSYCKSEKSKEENEPIEERISNKVQMKELDDQVAGNNTFKREHIFLDEENSYCK NEESKEESEPIEEKISNKVQMNNEQLDAQVSEDAQENFILSTNVENEETNEERTSSKV HVIIDELGGQVSESNTFKREDVEKNFKPVSEEREKSNEENEAIQTIFIKDQLKNEEIN DQAVEKIHELDEEKEEFEDVDKVKITSCEAPRHNIEHKEGKLLDEDLDLDLYENQVQN EDVIMGRFYEEDLLNDDLNEEDIKVRRGSRKRYTHVIQEMKKMFDTNNEEKEETEENK FQAVPAITVNDSDSDEILLDEELVRKKKMIEVADLNVEEPPKSLLEFLEPEKIPKENR GSFEFEEIEFDDEEIERIKANYEEIPKEVYKGIYFEDEDIQHGDLVEVMITEPKTGTP KEEITVVMTLEPESSVVIEEITEEEEMKIEPSSCLIVETHNFILTEKTTSEESGEENG PTEEIVKIEELGDQGVVEFCEDKDEKEDKVRKQSCEEIDFVPCVPKVPNEDLDERNHQ KIEDEERAELVEEIDEEEQEIFEDVDKVKNHQKSEDEERVNNEDKEERNSNNLQENDS FGATSPDQTKNEEKSGVFSKFLPEELSPEELEILHQLTKRRISRPLSDLKDEDLDLIE KLKEQYVEEIEENAKKRPPPRILSPTKLNEKPSYEPVYANYSFTSNNRTSTQLQASIS GKKPVALPRVTSLDTSTEDQDLYREFSGQVRKTRFSITYERKKGDSFKEQNQEKSAKV SDLREMFERRSKID" mRNA join(695307..695442,695916..695947,696009..696064, 699407..699497,699545..699651,706363..706879, 709060..709193,709248..710226,710275..710437, 710490..714234) /locus_tag="TcasGA2_TC015023" /gene_synonym="AUGUSTUS-3.0.2_15023" /product="hypothetical protein" /note="transcript variant 1" /db_xref="BEETLEBASE:TC015023" CDS join(695924..695947,696009..696064,699407..699497, 699545..699651,706363..706879,709060..709193, 709248..710226,710275..710437,710490..714049) /locus_tag="TcasGA2_TC015023" /gene_synonym="AUGUSTUS-3.0.2_15023" /note="transcript variant 1" /codon_start=1 /product="hypothetical protein" /protein_id="EFA04954.2" /db_xref="BEETLEBASE:TC015023" /translation="MFNLFKNKKDPGKPSTKPPKRVQTPHRTGVRTPNGETKSPWFRS PKPSKNNNIRDVQIRSISASAPSLNNNNENKKSSKRPLTFAEGNVTLRRGQQTSKIET AATTPDDLSRSSSITNLNADPKAKGAKPKKAESKDKLDKVADKKNDKKAVNKNNNKES EGSTDSEVETLQKQLAQMANDKTNLALQLGEQNGHIHKLQEEVKQLKMMHQEAEIKVE QLMDENSVLRKQLRDVANSPLSDNEKQQILYETHRQHSSAPASIATNLLDDGGDITAC PTPEWDKHSSSNVSEVSVACLQDKIHQMQETHYSTNEELQATLQELTDLQKQLTELQQ ENLRLSDEKNLMFESLCRQTERLNDSRNEVESLKQLLYNDENGQFETAAEREQKLVDL LKKAQEEREALLVKQEQLGNELEDARSGNLIQNKEIGQLSERVKTLESTLDAKHAEHK QLDQELAQAKDQSSSRQIEINRLKDLLENARTKINELEQDRALSDKSELDELLDNARK EKDALESEVAHLKEQLALSKNETEKLKEQVSILQEECKVTRNNAKTTQSDLEYKLEKL QAEKIALTQQLQEFQDAVNELQVQAQCQAEDKRQLSAVLSETQRNLNESERKIADLES ELAELKRIKADQEEEWEKFQKDLLTSVRVANDFKTEAQQDLEKLVMENKAGRDRIKQL EAQIEKLKGSRRKSNQFEDKIASLNRRYKQIEGLTDEQLTEEQRAVKDLKRHYERDLP RRKPIANKPKDKLAISKPCLGSVVANPKLQKFVQDSTLREVQFEPEVQFESKVQFESK TQYKSEVQFGPEVQKESEVQNRIFERDVQSEIFEACEPIYEGHVRSKSLTDLPEVEPR LRRYGSIENLLDLTKPRVKKPRKKSTVTFDTLDKICRDIDTNTPEDELSNEQKFALRL REVLNKEPKKIPVRKLSKSGRKKLVISRPTEESVKKNEKLRRIINDPVIKNVGPENRV VRRSKAVRRDKGRYSAPVAPPRPGGSLKMTKSKSHNDIHFKFQVPDMYSGKEESVKFP VLPPEEFRDPVPSTAADNSAFRTFHVEKNMFKREDNYLDEDLRKAFTEERIPNEDQMK NEELDDQVAGNNTFKREHIFLDEENSYCKSEKSKEENEPIEERISNKVQMKELDDQVA GNNTFKREHIFLDEENSYCKNEESKEESEPIEEKISNKVQMNNEQLDAQVSEDAQENF ILSTNVENEETNEERTSSKVHVIIDELGGQVSESNTFKREDVEKNFKPVSEEREKSNE ENEAIQTIFIKDQLKNEEINDQAVEKIHELDEEKEEFEDVDKVKITSCEAPRHNIEHK EGKLLDEDLDLDLYENQVQNEDVIMGRFYEEDLLNDDLNEEDIKVRRGSRKRYTHVIQ EMKKMFDTNNEEKEETEENKFQAVPAITVNDSDSDEILLDEELVRKKKMIEVADLNVE EPPKSLLEFLEPEKIPKENRGSFEFEEIEFDDEEIERIKANYEEIPKEVYKGIYFEDE DIQHGDLVEVMITEPKTGTPKEEITVVMTLEPESSVVIEEITEEEEMKIEPSSCLIVE THNFILTEKTTSEESGEENGPTEEIVKIEELGDQGVVEFCEDKDEKEDKVRKQSCEEI DFVPCVPKVPNEDLDERNHQKIEDEERAELVEEIDEEEQEIFEDVDKVKNHQKSEDEE RVNNEDKEERNSNNLQENDSFGATSPDQTKNEEKSGVFSKFLPEELSPEELEILHQLT KRRISRPLSDLKDEDLDLIEKLKEQYVEEIEENAKKRPPPRILSPTKLNEKPSYEPVY ANYSFTSNNRTSTQLQASISGKKPVALPRVTSLDTSTEDQDLYREFSGQVRKTRFSIT YERKKGDSFKEQNQEKSAKVSDLREMFERRSKID" assembly_gap 714518..715298 /estimated_length=781 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene 715307..720591 /locus_tag="TcasGA2_TC015024" /gene_synonym="AUGUSTUS-3.0.2_15024" /db_xref="BEETLEBASE:TC015024" mRNA join(715307..715618,719913..720187,720242..720591) /locus_tag="TcasGA2_TC015024" /gene_synonym="AUGUSTUS-3.0.2_15024" /product="Spectrin beta chain-like Protein" /db_xref="BEETLEBASE:TC015024" CDS join(715381..715618,719913..720187,720242..720331) /locus_tag="TcasGA2_TC015024" /gene_synonym="AUGUSTUS-3.0.2_15024" /codon_start=1 /product="Spectrin beta chain-like Protein" /protein_id="EFA04955.1" /db_xref="BEETLEBASE:TC015024" /translation="MASDVKIPSPIETLRTPTEWAEPKTPLKEQQPNKLNRDWSKAVI ADSLKGEKGKNEEGFRETILQKGLDYSRRNSYSDISERKDPLNGLVKNGGSKRNALLK WCQNKTVGYRNIDITNFSSSWNDGLALCALLHTYLPDRIPYDNLTPQEKRRNFSLAFS AAESVGIPTSLNINDMIQLERPDWQQVMGYVTAIYRHFET" gene complement(720637..726718) /locus_tag="TcasGA2_TC015669" /gene_synonym="AUGUSTUS-3.0.2_15669" /db_xref="BEETLEBASE:TC015669" mRNA complement(join(720637..720951,720993..721234, 725171..725292,726041..726200,726249..726718)) /locus_tag="TcasGA2_TC015669" /gene_synonym="AUGUSTUS-3.0.2_15669" /product="Alpha-tocopherol transfer protein-like Protein" /db_xref="BEETLEBASE:TC015669" CDS complement(join(720706..720951,720993..721234, 725171..725292,726041..726200,726249..726408)) /locus_tag="TcasGA2_TC015669" /gene_synonym="AUGUSTUS-3.0.2_15669" /codon_start=1 /product="Alpha-tocopherol transfer protein-like Protein" /protein_id="EFA05485.1" /db_xref="BEETLEBASE:TC015669" /translation="MVQKRKVDAFFEAPNELVEFIKREIGEDDDRIKHVEDLLQQRVH FDKHMPKNYDKAMARNFIRGAKFNLEITRRKLEGYFLAKKAFPMFYHNRNPNCKDLLR AFDTVNIARMPKLTQDGERVCILSLADSNPDNFIMLDVLKLFWMLYDLTLTCDLPITS EIFIFDCASAKPEHLVKFLSSSFKNSVSILQDAYAARVSQLHVVNCPTMAEKVIAAVR PLIHEKVKKRFIVHKGVESLLNHLQPKVLPAEYGGHLESIRDYSRSWQEILVANADWF EGQEGVTITGTPPRGINKFDNGLEGSFRQLNID" CONTIG join(AAJJ02002262.1:1..20436,gap(50),AAJJ02002263.1:1..82396, gap(14),AAJJ02002264.1:1..84455,gap(91),AAJJ02002265.1:1..2206, gap(50),AAJJ02002266.1:1..56442,gap(50),AAJJ02002267.1:1..45915, gap(536),AAJJ02002268.1:1..1923,gap(2203),AAJJ02002269.1:1..1572, gap(50),AAJJ02002270.1:1..7026,gap(301),AAJJ02002271.1:1..8361, gap(1),AAJJ02002272.1:1..67691,gap(437),AAJJ02002273.1:1..3349, gap(349),AAJJ02002274.1:1..22969,gap(1146),AAJJ02002275.1:1..3381, gap(247),AAJJ02002276.1:1..4038,gap(1944),AAJJ02002277.1:1..3668, gap(1808),AAJJ02002278.1:1..12262,gap(48),AAJJ02002279.1:1..72913, gap(190),AAJJ02002280.1:1..9898,gap(1),AAJJ02002281.1:1..3971, gap(1609),AAJJ02002282.1:1..114559,gap(125),AAJJ02002283.1:1..3828, gap(699),AAJJ02002284.1:1..1949,gap(291),AAJJ02002285.1:1..12811, gap(792),AAJJ02002286.1:1..3855,gap(3767),AAJJ02002287.1:1..24399, gap(662),AAJJ02002288.1:1..20783,gap(781),AAJJ02002289.1:1..11898) //