LOCUS KQ461185 1885924 bp DNA linear CON 28-SEP-2015 DEFINITION Papilio machaon isolate ya'a_city_454_Pm unplaced genomic scaffold scaffold47, whole genome shotgun sequence. ACCESSION KQ461185 LADJ01000000 VERSION KQ461185.1 DBLINK BioProject: PRJNA270386 BioSample: SAMN03290678 KEYWORDS WGS. SOURCE Papilio machaon (common yellow swallowtail) ORGANISM Papilio machaon Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Papilionidae; Papilioninae; Papilio. REFERENCE 1 (bases 1 to 1885924) AUTHORS Li,X., Fan,D., Zhang,W., Liu,G., Zhang,L., Zhao,L., Fang,X., Chen,L., Dong,Y., Chen,Y., Ding,Y., Zhao,R., Feng,M., Zhu,Y., Feng,Y., Jiang,X., Zhu,D., Xiang,H., Feng,X., Li,S., Wang,J., Zhang,G., Kronforst,M.R. and Wang,W. TITLE Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies JOURNAL Nat Commun 6, 8212 (2015) PUBMED 26354079 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1885924) AUTHORS Li,X. and Fan,D. TITLE Direct Submission JOURNAL Submitted (16-MAR-2015) Kunming Institute of Zoology, State Key Laboratory of Genetic Resources and Evolution, No. 32 Jiaochang Donglu, Kunming, YunNan 650223, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.3 Assembly Name :: Pap_ma_1.0 Genome Coverage :: 10.0x Sequencing Technology :: 454; Illumina HiSeq ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1885924 /organism="Papilio machaon" /mol_type="genomic DNA" /submitter_seqid="scaffold47" /isolate="ya'a_city_454_Pm" /db_xref="taxon:76193" /chromosome="Unknown" /sex="male" /tissue_type="whole body" /dev_stage="adult" assembly_gap 13215..18543 /estimated_length=5329 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <36014..>40214 /locus_tag="RR48_08407" mRNA join(<36014..36170,36251..36646,36763..37011,37922..38114, 38796..39084,39222..39371,40077..>40214) /locus_tag="RR48_08407" /product="Serine proteinase stubble" CDS join(36014..36170,36251..36646,36763..37011,37922..38114, 38796..39084,39222..39371,40077..40214) /locus_tag="RR48_08407" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Serine proteinase stubble" /protein_id="KPJ07394.1" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR001314" /db_xref="InterPro:IPR009003" /db_xref="UniProtKB/Swiss-Prot:Q05319" /translation="MSRKSCAVGGARGACMWVQECNRVGGIHAGVCVDGFMFGSCCRL PEKPILIEENPTTITDRPYAAPSSATTTQPPETTQAPPRPTSQTQRPSFMTKPIDGAP SYNYRPPEINLPSLSIESSSEQNSDIVNKIPYNNVNKYQNVNRPSGEMETSPHNKISS SLSILAGARPMAVSEQHPDNSISGAHMMSRPNNANTQWQATTEPTFVTKTRPGSWEKP GKPKPTKKFTTTTAKPHKSHKPKDPTLNVIKTDEPTSPPIHTTAATDSVECGVTAMWP RPETRIMGGQDSSFGRWPWQVSVRRNSFFGFSSTHRCGGAIINEGWIATAGHCVDDIY NTLVRTVLEYGSIIWSPSYNIHTARLEAVQNQFLKILSFRMGLGRSLSSYTARCKKFN VVTLEIRRKRQDLLWLHKIIHSSADTPKFNSSIHKLVQVPILSNERCKSMFLRAGRHE FIPDIFLCAGHERGGHDSCQGDSGGPLQVKGKDQRYFLAGIISWGIGCGEANLPGVCT RISKFVPWILQTVSS" gene complement(<42798..>43610) /locus_tag="RR48_08408" mRNA complement(<42798..>43610) /locus_tag="RR48_08408" /product="hypothetical protein" CDS complement(42798..43610) /locus_tag="RR48_08408" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07395.1" /translation="MATYAQYMPQQIYNFPITINDWNPIITLPTSVYTTTVHQVPFVT ITPQTINPAVVQSLCPCGTVITEPMIPVVSPTIISEAVQIPETYYEPLVNYIPETIKP QYINDIIPNEAHKDKENKLTPTESVNSDGTEESIENYLRLPKELFPTARMFTIDPNQI IDVFCLQEDISDHTPWLLDLEFGLPRVAVTRHIPIYNVQFNSIHCKNTPIAIHPGFER CHKDFKRELLFYYDCIVSTWYKGFVEIKNDTSVKNFQTWLLKAMQVFGMCWP" assembly_gap 46478..51038 /estimated_length=4561 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 58680..58856 /estimated_length=177 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<59881..>67030) /locus_tag="RR48_08409" mRNA complement(join(<59881..60777,66989..>67030)) /locus_tag="RR48_08409" /product="hypothetical protein" CDS complement(join(59881..60777,66989..67030)) /locus_tag="RR48_08409" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07396.1" /translation="MGPKLVGAVTGRSNIQFKNMASVDNKENMTQPKTLQEALNVIKF LETTHKQEIIKMKDAYHKQSEIVKKLEVNRKKELEFLSSELQKYEINLALRMESVTVQ LTQKDEIIRKQAEIIEELNKKLSHNFSIPDINIVDSNSDSGVALEETVISKNETKAEV KATRKCSRKFTDPIGFLRRVDFSPMKYKPSNREVKKKEDKKKHHDTQLTENRILVPQF SNGKVTSDDERNTGEDAGLSDSLTEPVMIKPKKLNESMNNHFSDDGSEDTSEEIFDRV MTRNSIRRSVKANPKYKKINRTKSKLLEQVKVNIVD" gene complement(<106569..>107643) /locus_tag="RR48_08410" mRNA complement(join(<106569..106933,107592..>107643)) /locus_tag="RR48_08410" /product="hypothetical protein" CDS complement(join(106569..106933,107592..107643)) /locus_tag="RR48_08410" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07397.1" /translation="MEKYILPILLLAAFVCQGINGNDIWLEDRHVQYISHDYLGTTIS IPKFIFDTLRSCHIIYPNGVMYEVFPTNNLPQSNVFFLEAVQPYTSCGVGFRGVGVEF SGTYELLSSVQHVSNNSITLTRQRFHLTVTLPEFTN" gene <111627..>115706 /locus_tag="RR48_08411" mRNA join(<111627..111714,112996..113153,113507..113641, 113929..114136,115142..115286,115523..>115706) /locus_tag="RR48_08411" /product="Phosphoglycolate phosphatase" CDS join(111627..111714,112996..113153,113507..113641, 113929..114136,115142..115286,115523..115706) /locus_tag="RR48_08411" /codon_start=1 /product="Phosphoglycolate phosphatase" /protein_id="KPJ07398.1" /db_xref="InterPro:IPR023214" /db_xref="UniProtKB/Swiss-Prot:Q2T9S4" /translation="MGPMNLMSMSTSDLNVFLDSFDHVFSDCDGVIWAKKPLPGSGEF FERMQQLGKTVHFVSNNSMRTRQNYENLFAAANISEGFEKLTIPSTAIAEYLKAINFS KTVFCVTCPETMNVLQSYGFTCKYGPEVGLDLYTNYNKYLEDDTEVGAVVFDSDFNVN LPKMYQAITYLARPDVLFISGATDRHVPLIPGRVLLGTGIFTDIVSEEANRKPTQLAK PGKLFGEFAMKRAGVTDPSRVLFIGDMIEQDIGLGKATGFKTLLVLTNNTYEDMKAHK SLKPDFYADSLGSLVPVLNKVCLNGNYDG" assembly_gap 118721..119586 /estimated_length=866 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <126179..>135171 /locus_tag="RR48_08412" mRNA join(<126179..126370,129228..129328,129494..129592, 130610..130818,131138..131278,131714..131916, 132362..132546,133188..133311,134619..134693, 135061..>135171) /locus_tag="RR48_08412" /product="hypothetical protein" CDS join(126179..126370,129228..129328,129494..129592, 130610..130818,131138..131278,131714..131916, 132362..132546,133188..133311,134619..134693, 135061..135171) /locus_tag="RR48_08412" /note="GO_function: GO:0005198 - structural molecule activity [Evidence IEA]; GO_process: GO:0007155 - cell adhesion [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07399.1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR003129" /db_xref="InterPro:IPR008985" /db_xref="InterPro:IPR012680" /translation="MAFRALCPINGGLSNRHLFVVILFLCQTIVCDSQCPKFAEKPLE TRVDDASIVFRAVVIQAHFQSKTLDLALVSIYRGGVELASVSQYSGSPYNTTDRKTLD LALVSIYRGGVELASVSQYSGSPYNTTDRQVNLKVSPQIEGCFNWSMAPSQSEFIIFA RISDPAEDLETTPADGPWLEATSAAVPWSLGVDIAIWNAVGWAGWGEWGVCSKTCGGG KQIRRRYCSKALCEGFGEQRRSCNSFDCTVSINPLAPDARRNFHPTQARWGSVPDRPH AFSLRPNSYIWIASSELFATGRTFPSEFTLFVSLRLRPESGGYGQGTLFSLRSRRRSG SFLSLELAGRGAARLVHAGAGLSRSIYLAVPLYDFRWHHIAISVHDDNTVRVYVDCRW LRTDVLEKDALDTPTDADLIIGYLFSGDLEQLVLVPKAGQAHKQCSSQVVGGDLEQLV LVPKAGQAHKQCSSQVVGVTSLPDTLQLP" assembly_gap 136517..136539 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 144017..145970 /estimated_length=1954 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <150355..>150669 /locus_tag="RR48_08413" mRNA <150355..>150669 /locus_tag="RR48_08413" /product="Viral cathepsin" CDS 150355..150669 /locus_tag="RR48_08413" /codon_start=1 /product="Viral cathepsin" /protein_id="KPJ07400.1" /db_xref="InterPro:IPR013201" /db_xref="UniProtKB/Swiss-Prot:Q9PYY5" /translation="MSFIILFVSLNILLCVNQSDAVIKKPRYEEKDVGNLFLKFVSDY NKSYKNYEDWLEHYEAFIQNLLWINYLNAIQDTVVYDINSMSDQTAEESRRMFNGLYG RE" gene <179820..>191170 /locus_tag="RR48_08414" mRNA join(<179820..180122,180757..180768,182263..182391, 191078..>191170) /locus_tag="RR48_08414" /product="Viral cathepsin" CDS join(179820..180122,180757..180768,182263..182391, 191078..191170) /locus_tag="RR48_08414" /codon_start=1 /product="Viral cathepsin" /protein_id="KPJ07401.1" /db_xref="InterPro:IPR013201" /db_xref="UniProtKB/Swiss-Prot:Q9PYY5" /translation="MSLLRCVLFCTIFVAILDTGLCDKPHYDLKDASDLFAEFRQKYN RHYASDNDLEAHYEAFVTSLLKINYLNSIQNSATYDINDFADMTPEEIKRHLGVLTDE HFQLSHHEAKLDENCKSSIYRNSFIGSLIASHRPQWLHVTRTFMPPKEANELITLIVT ILTEIVFTICYSVVVTTA" gene <197946..>208810 /locus_tag="RR48_08415" mRNA join(<197946..198245,198700..198722,208687..>208810) /locus_tag="RR48_08415" /product="Viral cathepsin" CDS join(197946..198245,198700..198722,208687..208810) /locus_tag="RR48_08415" /codon_start=1 /product="Viral cathepsin" /protein_id="KPJ07402.1" /db_xref="InterPro:IPR013201" /db_xref="UniProtKB/Swiss-Prot:Q9J8B9" /translation="MAGIKYGFILIFTFVITSRALDKPWYDLRNSEELFKKFQYDYNR HYETEDDRERHYEWFISNIVRINYLNSKEDTAVYGITIFADHPVVDAKLMLGYITDND DELWLPVATYRVIPALRLATAAAFETFVSDVLIDILQQRFGTRFPE" assembly_gap 201315..201526 /estimated_length=212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 216275..216371 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <241526..>241999 /locus_tag="RR48_08416" mRNA <241526..>241999 /locus_tag="RR48_08416" /product="hypothetical protein" CDS 241526..241999 /locus_tag="RR48_08416" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07403.1" /translation="MYNSNEFLHSAGVSRHMQATGEAPSQKTSMKRRSCEVPLGDISS NNFKVSLGDITNDGPNYDCRSLRSVKSEDTRSLRCYRPIDSRSVKNFRSSLVDISAYS LSRPPSYDQLSRRSMVDGADCAGITSSIEGVLWSDEEENEYFYHENVTSAWNQGQ" gene <272261..>272491 /locus_tag="RR48_08417" mRNA <272261..>272491 /locus_tag="RR48_08417" /product="hypothetical protein" CDS 272261..272491 /locus_tag="RR48_08417" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07404.1" /translation="MDQLRVLIHVKDQFRSLVNVMDQLRALVNVKDQFRSLVNVMDQL RVLINVKDQFRSLVNVMDQLRVLINVKDQLGH" gene complement(<283937..>285906) /locus_tag="RR48_08418" mRNA complement(join(<283937..284135,285764..>285906)) /locus_tag="RR48_08418" /product="Cystine/glutamate transporter" CDS complement(join(283937..284135,285764..285906)) /locus_tag="RR48_08418" /codon_start=1 /product="Cystine/glutamate transporter" /protein_id="KPJ07405.1" /db_xref="UniProtKB/Swiss-Prot:Q9WTR6" /translation="MGEEIPNGDTKVVLKRKITLFNGVGIIIGTIIGSGIFISPTGVF IYTEVIVHPKSAPGRGLTADIQNNSHGRCTGNNQRCTPNAEHGEIKPPNAGNGRGLFD VYFALYMFLDA" gene complement(<286799..>288512) /locus_tag="RR48_08419" mRNA complement(join(<286799..287166,288455..>288512)) /locus_tag="RR48_08419" /product="hypothetical protein" CDS complement(join(286799..287166,288455..288512)) /locus_tag="RR48_08419" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07406.1" /translation="MGWGPGRGGATAQCMSAVGGVFGGHINAQRLGIVQIAAYPPSAQ AHAAASVSGSRAMALAAASVVLFRVAVAASRSRLSHHKSASIRNGQSCIFSCSYFPSC LLFKETKTVTYQKQPTGLLLTAHDIKITEDKHGKRQNLK" gene complement(<288791..>299955) /locus_tag="RR48_08420" mRNA complement(join(<288791..289300,289443..289607, 289859..290089,290181..290548,290653..290862, 290945..291142,291231..291430,291513..291633, 291969..292099,292541..292746,292862..293416, 293548..293748,294064..294681,294799..295770, 295883..296361,296630..296858,297107..297300, 297640..298306,298980..299210,299284..>299955)) /locus_tag="RR48_08420" /product="Fatty acid synthase" CDS complement(join(288791..289300,289443..289607, 289859..290089,290181..290548,290653..290862, 290945..291142,291231..291430,291513..291633, 291969..292099,292541..292746,292862..293416, 293548..293748,294064..294681,294799..295770, 295883..296361,296630..296858,297107..297300, 297640..298306,298980..299210,299284..299955)) /locus_tag="RR48_08420" /note="GO_function: GO:0000036 - acyl carrier activity [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups [Evidence IEA]; GO_function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]; GO_function: GO:0048037 - cofactor binding [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0009058 - biosynthetic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Fatty acid synthase" /protein_id="KPJ07407.1" /db_xref="InterPro:IPR001031" /db_xref="InterPro:IPR006163" /db_xref="InterPro:IPR009081" /db_xref="InterPro:IPR011032" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013968" /db_xref="InterPro:IPR014030" /db_xref="InterPro:IPR014031" /db_xref="InterPro:IPR014043" /db_xref="InterPro:IPR016035" /db_xref="InterPro:IPR016036" /db_xref="InterPro:IPR016039" /db_xref="InterPro:IPR020801" /db_xref="InterPro:IPR020806" /db_xref="InterPro:IPR020807" /db_xref="InterPro:IPR020841" /db_xref="InterPro:IPR020842" /db_xref="InterPro:IPR020843" /db_xref="UniProtKB/Swiss-Prot:P12276" /translation="MDPQLRLLLELTHEAIVDAGLSPAELRGSRTGVYVGVSNSETEE MWTADPDKINGYALTGCCRAMFPNRISYTFDLKGPSYAIDTACSSSMFALAQAAAAIR AGQCDAAIVAGTNLCLKPANSLNFHRLSMLSPEGRCAAFDAGGRGYVRSEAAVVVLLQ RRVSARRLYATVRGARMNTDGSKVQGITFPSGDVQRRLAEETFSEAGLRPQDVVYVEA HGTGTKVGDPQEVNAIADFFCKERTTPLLLGSVKSNMGHSEPASGLCSIAKVIIAMEE GVIPANLHYKTPNPDIPALSDGRIQVVDKNTPWDGGLVAVNSFGFGGANAHVILESQR GTRSPAQPAGQPAGQPADLPRLVVASGRTEAAVRRLLQLAADHAQNAHLLAMLDAVHA HNIPGHAFRGYRLLGEPSSQAPPVEDVQEAESSEPRPLWFVFSGMGSQWAGMARTLLR LPAFARSVARCAAALRPHGVDLAHVLTDAPDSAFEDVVTSFVSIAAVQVALVDVLREL GLRPDGIVGHSVGEIGCAYADDTLTAEQAVLAAYWRGRSIVDARLPPGAMAAVGLGWE EAGARCPPDIAPACHNAADSVTVSGPAESIERFVAQLAAEGVFARRVNSSGVAFHSRY IAAAAPLLRRSLERVIPDPKPRSRRWLSSSLPKDQWDSDIARMSDAAYHVNNLLSPVR FAEALGEVPERALLLEVAPHALLQAVLRRARPLAAHVPLLRRDAPDLAAHLLAAAGRA YCAGAQPRVSAFYPPVAWPAPRGTPRLASHVLWDHSSEWSVANFGAASRSGENVIEYD LSRPDDDFISGHNIDGRILFPATGYLTLVWRTMAKIHNRKLEDTPIILENVQFKRATI MSRDAPVRFLVNVLDGSGEFEVCEGGAVAASGLVRLAEQPAAERLPAPPAPPRVSPDL LPLATDDIYKELRLRGYSYAGAFRGIRASDPLGVAGSLAWDGNWITFMDTMLQFAIIG VDTRELYLPTRLQRALIDPAAQCAAAAAAEAAGAPGVLSVRMMRDLDVVLAGGVELRG VKTSLAPRRANPQPPPKLEKYVFVPYDKSDVVGCDSGEGGTRSKREALTACLQLVWEN AGALRLRACEAALGRAPESLLLPTVLALLDAEPQVRVEPVLAAGADAPLYEAAMQKLA VKVSTKDARSAAPEAECHLVVAADVLGRHGAPLLRHLAAALAPAGMLLLEEPHDALRS QAAQDALRSAGLVSVARQRAAACEYLLLRREPTPPPAHLVLEIAEDSSYAWVETLRDA LKRAETEDVRVYVWSRAPTSGLLGLGTCLRAEPGGRALRVFFLPEAAETFAPDAPTYA EQTRKDLAVNVLRAGVWGSYRHLALPDAADLQLQVEHAYVNTLTRGDLASLRWVESGL AYAAPRAGTTRCAVHYAPLNFRDVMLATGKLPPDALPGDLAGQECILGLEFSGRAPDG RRVMGMVAARGLATSVLADDGFLWDVPDSWTLEDAATVPVAYATAYYALCVRGRMRRG ESVLVHAGTGGVGQAAIAIALHAGCTVYTTVGTPDKRAFLRDRFPALPDDNIGNSRDT SFEQLVLRRTRGRGVDLVLNSLAADKLLASVRCLANGGRFLEIGKLDLSNNTPLGMAI FLKNTTFHGILLDALFGAEGAEGAEVAGHERAAVVRCVAEGIASGAVRPLPRTVFADH QLEQAFRYMATGKHIGKVVIRVRDEETPGSKLVPAVPRTYFRPDRTYVLVGGLGGFGL ELAEWLVVRGATRLLFNSRSGVRTGYQSWCIRRWRARGVHVALSTADATGVAGARALL REAAALAPVGGVFNLAAVLRDAFLENQTPDDFRAVARPKVDGTKSLDSATRELCPELE YFVVFSSVSCGRGNPGQSNYGLANSAMERIVERRQADGLPGLAVQWGAIGEVGLIVET MGGDESEVGGTVPQRIASCMVALGALLARPHAVAASMVLADKRRAPATPSHDLLHAVA NILGIKDPSKVSESANLAELGMDSLMGAEIKQTLERGYDVVLGVQEIRALTFAKLRVL AGGEVEGGSETEVPEQGETPEQATAAEHAPLAGDLVQFPALEELVPEQVLVKLPSAAP DNTEIKPVFMVHPIEGVVRALAGVARAVRAPALGLQCVAAAPLTDMTALAAFYVRQVR AAQPHPPYTLLGYSFGASVAFEMALQLEQAGCETRLVLVDGSPAYVATHTTRGKAKRA ARSAATDEADALTYFTQLFVEIDANKVFSELEALGGWEARVQHVTALLRGVTPHAPAA LAAAAHSFYRKLVAGDTYRPARRLRAPVTLFTARDNYVTLGEDYGLAEVCAGPLNTLQ LAGTHRSILTGEAARAIADHLSALQSAQSPQAAQSARRSPRSRRDSSTRHADAGDRAD AGRGSARPARPLTMIFCTTFI" gene complement(<301041..>305984) /locus_tag="RR48_08421" mRNA complement(join(<301041..301193,303923..304239, 305305..305558,305770..>305984)) /locus_tag="RR48_08421" /product="hypothetical protein" CDS complement(join(301041..301193,303923..304239, 305305..305558,305770..305984)) /locus_tag="RR48_08421" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07408.1" /translation="MPLMYDGKGTVRCGIGARRQVTPRALPAARDLHSLACDVSSAAA GQGARGDSARGRSGRSEQLPRPPLAVPRCVVQTAYAGDCGCSMLTDVFRVADSACGCS MPSAMVNGAQASPDDVVLTGLSGRLPESDNVEEFARHLFAGVDLVTADDRRWTPVWFK IEQRFNKAINEVKQIIVYYCWRRGAVTAARLLCAVRPHLSYTQTARRSPLANIADVFF KLGIVTAQFASTTRLGREQLVSCAFARCALTFLSPGAMQAQLSPFANNNLLVAIVCGD VIGVRHDRKKSHKIKTCARQTGKPQNAISAIAADVG" gene complement(<313041..>313370) /locus_tag="RR48_08422" mRNA complement(<313041..>313370) /locus_tag="RR48_08422" /product="hypothetical protein" CDS complement(313041..313370) /locus_tag="RR48_08422" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07409.1" /translation="MASWPATTAGEVTIDGASDDTAPTRLRGVHARPPLARPARGLIS YHSNAPPAPPPRPRCALPLDSHGGRSRSRLRRRVSRRAAQQSVSRRPPEARAVCDILV FKADAGR" gene complement(<317840..>318073) /locus_tag="RR48_08423" mRNA complement(<317840..>318073) /locus_tag="RR48_08423" /product="hypothetical protein" CDS complement(317840..318073) /locus_tag="RR48_08423" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07410.1" /translation="MMMSICFVELFRKQRARCGVVLQFKVAVERVFPWWAGREAYERA AAGGARGKLLLHMAAPEPPAPPAPTAPPAPPHS" gene complement(<320839..>321367) /locus_tag="RR48_08424" mRNA complement(join(<320839..321125,321223..>321367)) /locus_tag="RR48_08424" /product="Reticulon-4-interacting protein 1, mitochondrial" CDS complement(join(320839..321125,321223..321367)) /locus_tag="RR48_08424" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]" /codon_start=1 /product="Reticulon-4-interacting protein 1, mitochondrial" /protein_id="KPJ07411.1" /db_xref="InterPro:IPR011032" /db_xref="InterPro:IPR013154" /db_xref="UniProtKB/Swiss-Prot:Q0VC50" /translation="MRAWRSHCYGGLAELRLEEARVPPLCAPDHLLVRVHTSSINPLD VAMVGGYGARALNALRALRGADVEFPLVVGRDFCGEVVAAGAGSRLRAGRRVWGVVPP HWPGAHADYLVVKDNWVIAGHRFAHASINTTHETSRYVVTW" gene <323011..>326733 /locus_tag="RR48_08425" mRNA join(<323011..323070,323974..324156,324934..325173, 325536..325680,325922..326073,326380..>326733) /locus_tag="RR48_08425" /product="Tryptophanyl-tRNA synthetase, mitochondrial" CDS join(323011..323070,323974..324156,324934..325173, 325536..325680,325922..326073,326380..326733) /locus_tag="RR48_08425" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO_function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]" /codon_start=1 /product="Tryptophanyl-tRNA synthetase, mitochondrial" /protein_id="KPJ07412.1" /db_xref="InterPro:IPR002305" /db_xref="InterPro:IPR002306" /db_xref="UniProtKB/Swiss-Prot:Q9CYK1" /translation="MSDQLSADHRAELLKVRNFTCKSETEADAAWPRRVVTGLQPTGE LHLGNYFGALRRCVQLQEQGEDVMVFIADLHSFTGRQEAGERQSRTLQAAAAVLAAGL QPERAVLFVQSAVARHAELCWLLACLATHARLAHLPQYKEKAATMKEVPVGLLLYPVL QAADILVYRGTHVPVGADQAQHLQVAAQLVRTFHHRYGRAFPTPRALLPDDGSDRIRS LRDPSKKMSKSDPDPKSRILLTDSDDVIRLKIRKAVTDCNPQVTFDPEGRAGVSNLVR LHCLARGLVPEEALCEAEGLTSAQYKEVVARALCECVAPVRARLCELAARPRLLHEVL RHGAARARRRADEVYERVAELTGLPPRLAPHLAPHLHARLSRT" gene complement(<328863..>331161) /locus_tag="RR48_08426" mRNA complement(join(<328863..329257,330109..330226, 330949..>331161)) /locus_tag="RR48_08426" /product="hypothetical protein" CDS complement(join(328863..329257,330109..330226, 330949..331161)) /locus_tag="RR48_08426" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07413.1" /translation="MSGVLTRCRVSSEQLDLLLSFMEEHRDFAAGKQSIYSRFSSSKL WRLLAERLNAAAADTGGARKSPDKWCRYWADIKYKARKKCAAGGALGDLSNAEERLQS ILGTRPPDSSGRGGSNSDEERKPVLEDDMYSEGSGGAGVAPGGDPRLGTEELLAEAAM RSALAAEKQAEAVTQAVDLLRDIVALMRERTYAPAHAHAHAAHASHAPHAAPAHVAHA AHPAHAAHEHGMVSLQQQHHPRI" gene <334214..>335056 /locus_tag="RR48_08427" mRNA <334214..>335056 /locus_tag="RR48_08427" /product="Serine/threonine-protein kinase MAK" CDS 334214..335056 /locus_tag="RR48_08427" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Serine/threonine-protein kinase MAK" /protein_id="KPJ07414.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q04859" /translation="MNRYVVLQQLGDGTYGSVVLAQRRDTGEKVAIKRMKRKYYSWDE AMNLREVKSLKKLNHANIVKLREVIRENDTLYFVFEYMRGNLYQLMRDSERPLPEPVL RNILYQVLQGLAHMHRHGFFHRDLKPENLLCAGPDLIKIADLGLAREVRSRPPYTDYV STRWYRAPEVLLRDTHYGPPIDLWALGCIAAELYTCRPLFPGNSEIDQLYKICGVLGS PERGEWPEGFALAEALRFRFPASAGVPLARAVPGASAAALALLAALLRYPPRDRPTAP QALR" gene <337717..>337938 /locus_tag="RR48_08428" mRNA <337717..>337938 /locus_tag="RR48_08428" /product="hypothetical protein" CDS 337717..337938 /locus_tag="RR48_08428" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07415.1" /translation="MPTRSLINFLEQLSQLTTGLTRDGKVFGRALTAGGKSPIIMAIG RRCLHLAADGPAETPRARTLCVADTYHFS" gene complement(<338989..>339912) /locus_tag="RR48_08429" mRNA complement(<338989..>339912) /locus_tag="RR48_08429" /product="TAR DNA-binding protein 43" CDS complement(338989..339912) /locus_tag="RR48_08429" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="TAR DNA-binding protein 43" /protein_id="KPJ07416.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q28F51" /translation="MSIEYALVSEGEEDEPIELPTEEDGSLLLSTVTAQFAGASGLKY RVGGRLRGLRLVEERVSPPPGGWAAHRYFCAFPRASAPPSRPRCSDLIVLGLPWKTGE DAVREYFSSFGELLMVQVKRDAKTGLSKGFGFIKFAEYEAQVRALGRRHMIDGRWCDV RIPNSKDGGAAAHRKVFVGRCTESLTAEDLREYFGAFGQVTDVFVPRPFRAFSFVTFL DPEVAQSLCGQDHIIKGVSVNISTASPKRDRGSRSQLLGWGLMEGSATRVYSWPPEAW PAHPQHAPPAPSAPAAPVSPARDAKPYLKYH" gene <344096..>347745 /locus_tag="RR48_08430" mRNA join(<344096..344253,347005..347398,347629..>347745) /locus_tag="RR48_08430" /product="hypothetical protein" CDS join(344096..344253,347005..347398,347629..347745) /locus_tag="RR48_08430" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07417.1" /translation="MLLPDQRYERRCWRHGVVRAEPAAALASLLRAHRVRPEFFCVYR SRWHAHNVRFCQPVPSSGPGDSVVEVSRAPDVTIGTTGARSSVSVRGERRGGGQGTGT VQYARDRAREWSVLSVWCGAAAVCDASGPAAMATLGLSKVFILDKYFTELQKFWETEK KLQGERRAVGSRCGLCRCCHVLTYIEHSEVGREAQARGASPAARRPPPAACPSARAAL SIRS" gene <355535..>360258 /locus_tag="RR48_08431" mRNA join(<355535..355673,355749..355921,356165..356443, 356506..357083,357240..357441,357593..357832, 358149..358439,358833..359078,359222..359404, 360130..>360258) /locus_tag="RR48_08431" /product="Myosin-VIIa" CDS join(355535..355673,355749..355921,356165..356443, 356506..357083,357240..357441,357593..357832, 358149..358439,358833..359078,359222..359404, 360130..360258) /locus_tag="RR48_08431" /note="GO_component: GO:0016459 - myosin complex [Evidence IEA]; GO_function: GO:0003774 - motor activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]" /codon_start=1 /product="Myosin-VIIa" /protein_id="KPJ07418.1" /db_xref="InterPro:IPR001609" /db_xref="UniProtKB/Swiss-Prot:Q17LW0" /translation="MNAYTDASNALTPAAARAQRPELARLVHDAVRHQADTGCPQAII LSGVSGSGKTYASMVLLRRLFDVAGGGPETDAFKHLAAAFTVLRSLGAAGTLANSHSS RIGHFIEVQVTDGALYRTKIHCYFLDQTRVVRPPPGERNYHIFYQMLAGLAPDERLQL HLDGYTAQDLRYDVRPPPRRLAATSPPPPRHLIAAYIVRGAAGPAHAACARDAHALAL YCRTVATIVRRANSLKRLGSTLGTLSSDSNDSVRDQDAASRRASTAGGRSRAGAQGMA ALNDAVRHATDGFVGILDMFGFEDAAPSRLEHLCANLCAETMQHFYNTHVFKSSAESC REEGVAGALEVEYVDNVPCIDLVSSLRAGLLAALDAECAARGSPEHYVARIRTAHRGH PRLGEARPPHARRFAVRHYAGEVVYDAAEFLDANRDCVPDALLAAFDSRCCEFGFATH LFGAELKALAASGGATGALFRASPTALAPAGPAAPAAPASTLTQDFHTRLDNLLRTLV HARPHFVRCLRANAAETPMLFERAVVANQVRALQILETVQLMANGYPHRMRFRAFGAR YRALWRRGERCAAGGAAGGAVEREAGAACARVLRAVAAAAAPPAPSSPAAVRWALGKR HVFLSEGMRQVLERMRRARRQAAAECIQAAWRRHRARAPRTAAPAPPQRPRPAPITGT PPPDPPGLPDPPDPPDKCDATLVKRTCSLFGLDLERPPPLPPSRAYTVSNGVKLGYPQ QRVLAADWADESGALRLRAGDTVLALGAARRGHVAVQVLGRTVPVPHSVLAPPRALRP RAPPAAPPAPPVAPPAPHALT" gene complement(<363481..>371606) /locus_tag="RR48_08432" mRNA complement(join(<363481..363692,363853..363949, 371499..>371606)) /locus_tag="RR48_08432" /product="hypothetical protein" CDS complement(join(363481..363692,363853..363949, 371499..371606)) /locus_tag="RR48_08432" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07419.1" /translation="MSSLVGTTRQCSPNFDRVREYTDVICFSFKNLPYAIEAELSAWT AFLQRAMDAAYNSEVVVDNLHNLIAEQRRCVREVAASHVLAALCEQPAAPSPAPSPSP APADDSRTPRTPRTPRTPTSLERRAPSAVSTPIQRD" gene complement(<374754..>376170) /locus_tag="RR48_08433" mRNA complement(join(<374754..375121,376017..>376170)) /locus_tag="RR48_08433" /product="hypothetical protein" CDS complement(join(374754..375121,376017..376170)) /locus_tag="RR48_08433" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07420.1" /translation="MTETVTNTNERKSLFSSFLEVLEARDTQIQLERQLEEEKYQRRT QRIYDFHERQRREAVELQRCLQYVSQHAHVLESVLRGAGAGEGVPLAAALLRQAAALQ RSMAQCVANAARIRQLLTAAHRPQMDTMLAKMVSLSALFCTIRQLTVESDRYGSKRLR RFRLDVVLTKSRR" gene <377193..>380236 /locus_tag="RR48_08434" mRNA join(<377193..377268,377760..377936,378815..378970, 379155..379291,379829..379965,380179..>380236) /locus_tag="RR48_08434" /product="Proteasome subunit alpha type-6" CDS join(377193..377268,377760..377936,378815..378970, 379155..379291,379829..379965,380179..380236) /locus_tag="RR48_08434" /note="GO_component: GO:0005839 - proteasome core complex [Evidence IEA]; GO_component: GO:0019773 - proteasome core complex, alpha-subunit complex [Evidence IEA]; GO_function: GO:0004175 - endopeptidase activity [Evidence IEA]; GO_function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]; GO_process: GO:0051603 - proteolysis involved in cellular protein catabolic process [Evidence IEA]" /codon_start=1 /product="Proteasome subunit alpha type-6" /protein_id="KPJ07421.1" /db_xref="InterPro:IPR000426" /db_xref="InterPro:IPR001353" /db_xref="UniProtKB/Swiss-Prot:P60901" /translation="MARESSAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRG ATAAVVAAQRKVPDRLLDPASVTHLFPITEHIGCVMTGMIADSKSQVARARYEAANWQ YKYGCEVPAHVLCRRIADISQVYTQNAEMRPLGCSMMLIAYDPETGPAVYKTDPSGYY CSYKAVAAGAKATDANAYLEKKLKKRAALGTEEAVQLAVACLAQVLAVDFKAADIEIG LVTKEDPRFRVLTEAEIDKHLTAIAEKD" gene complement(<380579..>382215) /locus_tag="RR48_08435" mRNA complement(join(<380579..381469,381556..381830, 382018..382110,382149..>382215)) /locus_tag="RR48_08435" /product="hypothetical protein" CDS complement(join(380579..381469,381556..381830, 382018..382110,382149..382215)) /locus_tag="RR48_08435" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07422.1" /translation="MSPPLLLLLLLLACAGPALLTDFSRAPPAMSPPLLLLLLLLLLA CAGPALLTDSECVIELTCSECVPEHMPLVTSHRAAAGVLRVPPGDELRLACPRGRFLT YPHHATLAVLCEAGRLRVRHDGVLRHLLHLGCQDDVFEDVPHQVEFCAPPLQGRAYRV QEAHGARHLATLCFDQDRGVASYARAGNAPDGALPLPPHEESSAPRSLLANFNQMFDS ATRRAADRLYSDDDRLHRRLREILKHDRFSFAEQTLTSVSLLAPAYFDDQNVRVADFA SNRVAAWRSVAAGNLRHLQRDVARLLVAARPHRHLEVYAGTHGVLALRTGGNRTEVFL EAERFPVPRYVWTVVQEAGSRRAVAVVVLNDPFVSVSEVREAVFCESLCGRVSWLQEL RRHRHYESAVYGLTFCCAVHEAARRMPEVPAGALAAVPAGDAGLLTDLL" gene complement(<383921..>386120) /locus_tag="RR48_08436" mRNA complement(join(<383921..384115,384959..385048, 385510..385709,385994..>386120)) /locus_tag="RR48_08436" /product="Ras-related protein Rab-10" CDS complement(join(383921..384115,384959..385048, 385510..385709,385994..386120)) /locus_tag="RR48_08436" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0006913 - nucleocytoplasmic transport [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="Ras-related protein Rab-10" /protein_id="KPJ07423.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002041" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR006688" /db_xref="InterPro:IPR013753" /db_xref="InterPro:IPR020851" /db_xref="UniProtKB/Swiss-Prot:P22127" /translation="MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGI DFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK WLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKSNINIE RAFSELAEAILDKTAGREADADAARIAVERRPSRAPPARACCS" gene <386839..>393874 /locus_tag="RR48_08437" mRNA join(<386839..387318,387616..387786,387942..388146, 388346..388571,388692..388815,388886..389064, 389139..389361,389448..389579,389881..389997, 390104..390262,390348..390560,390640..390969, 391044..391212,392757..392887,392980..393150, 393267..393470,393567..393708,393795..>393874) /locus_tag="RR48_08437" /product="Cohesin subunit SA-1" CDS join(386839..387318,387616..387786,387942..388146, 388346..388571,388692..388815,388886..389064, 389139..389361,389448..389579,389881..389997, 390104..390262,390348..390560,390640..390969, 391044..391212,392757..392887,392980..393150, 393267..393470,393567..393708,393795..393874) /locus_tag="RR48_08437" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Cohesin subunit SA-1" /protein_id="KPJ07424.1" /db_xref="InterPro:IPR013721" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR020839" /db_xref="UniProtKB/Swiss-Prot:Q9D3E6" /translation="MHRRGGKRIRMDDPPPEYVNPMTPATPMTDYGGQSVHEPETPHP NYSGFKIGTAANSTAVEAAREEVEEHQEEDGRSPSPAPTKRITRSRGRGGDGGYVGRL AESPPPPPLRRRGRGGRGRGRGRGAAPPPASSPPPILMPGDDENSLYNILRFNKAAIN QVVDMWIEEYKTNRESALVQLMQFFINSSGCRGKVTPDMASMDHTLIIKKMTQEFDEE SGEYPLIMSGQTWKKFRSSFCEFIQTLVKMCQYSIIYDQYLMDNIISLLTGLSDSQVR AFRHTATLAVMKLMTALVDVALLTSVNCDNCLRQYEAERLKARDKRASERLEVLVAKR QELEENMEEIKNMLSYMFKSVFVHRYRDTLPDIRAITMAEIGIWMEKFPAHFLDDLYL KYIGWTLHDKVGEVRLRCLQALQPLYECEELKGKLELFTSKFKDRIVSMSLDKETEVA VHAVKLVIAILKMHPDMLVDKDCENVYELVYSSWRSVAAAAGEFLNVRLFRSEEPAAA PQRSRRGKVRLPNTPLLRDLVQFFIESELHEHGAYLVDSLIDSNPMMKDWECMTDLLL EEPGPDEDPLDNRQESSLIELMVCCVRQASTGEPPVGRGPARKNQLLSKEQAKMVNDE RARMTTHFMVVLPTLLEKFRADPDKLANLVAIPQYFDLELYTTQRQEANLTLLLNKIR EIVRQQTECEVLETCGRTLEYLCSEQCAVYSRCKVARATITDMCVDKYREAIDEFRTL IEGGETPDADEQFSVTNSLRKVSIMYMCHNLNDNNIWDSLFEDLPKCLDKDDPMPKLA LVYVVRACFYSLLWSLHELEERGTGADLLRDRLHGYCAHCRDIVARGTTAQLRSEAYT SICDLLILFAEQLHSRHHPGDERYRRLVYEPDATLCDLLNDFIQEFVFVLPNYENQDE RRIEELHKRRNFLAAYCKLIVYNVIPIRRAADVFKHYIKCYNDYGDIIKCTVSKTREM SKLNCALTMQLAMQALFSDMLRHQPAPHRALPDLVEIKELAKRFAVMFGLDAVKNREA LTALHRAGIAFAALEGAGAGPPPNLLFLEPLSEFSNKLLRQDKRQVLKFLDSRLQPTS AWREEWSALQTYRGSLLSDAPDDRPPPPARRHYTRRARAGAGAGHNEEEEGEEHADSD QEHPG" gene complement(<397255..>397653) /locus_tag="RR48_08438" mRNA complement(<397255..>397653) /locus_tag="RR48_08438" /product="hypothetical protein" CDS complement(397255..397653) /locus_tag="RR48_08438" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07425.1" /translation="MSPAQTAILLMAAATMAAVRAKPRPVPLETALNKTLCPIEVEID DNPERVPRRIKLIKCKAEPKEWCQQQNIAQFECCEHTHSDHVMECVQIEDRVLVQFPV TGNTSTMHVPVGCVCMVSPLKKAGKLTSSP" assembly_gap 404063..404400 /estimated_length=338 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<424284..>426807) /locus_tag="RR48_08439" mRNA complement(join(<424284..424467,424551..424714, 424793..424910,425039..425116,425193..425334, 425424..425583,425881..426014,426750..>426807)) /locus_tag="RR48_08439" /product="Ring canal kelch-like" CDS complement(join(424284..424467,424551..424714, 424793..424910,425039..425116,425193..425334, 425424..425583,425881..426014,426750..426807)) /locus_tag="RR48_08439" /codon_start=1 /product="Ring canal kelch-like" /protein_id="KPJ07426.1" /db_xref="InterPro:IPR006571" /db_xref="InterPro:IPR011705" /db_xref="UniProtKB/Swiss-Prot:Q70JS2" /translation="MNLLAVTPHLGNFRVPLWKCGKSASSFMERCIAFIGDNASECVK TNAFLNLPKEALIKLISSDFLCLEEEEVWRCVLAWAKQRAGVTQPTAHWAEEERARVC HHLAPLMQHVRLLLIDSAVFAEEVEPTGAVPMELSLERYRRAALHSAPRPAPRPDPDK RTQPRLAVNLFAGSAILQQDKSAFQSLINTWCGSPKQSWRLVFRASAHAFSAHAFHAH CDGVAPVLLLVQLQRGEVIGGYCEAGWAAGGAGGYVSAERALLFSLAEPPARYPLLKK PFALCHHPDCGPIFGAGADLLVSHQCNSNSDSYSNLHSYGDAAPAAPAASLAPDYNFT VREYELFTCAP" gene complement(<427210..>427497) /locus_tag="RR48_08440" mRNA complement(<427210..>427497) /locus_tag="RR48_08440" /product="putative small nuclear ribonucleoprotein E" CDS complement(427210..427497) /locus_tag="RR48_08440" /codon_start=1 /product="putative small nuclear ribonucleoprotein E" /protein_id="KPJ07427.1" /db_xref="InterPro:IPR001163" /db_xref="InterPro:IPR006649" /db_xref="InterPro:IPR010920" /db_xref="UniProtKB/Swiss-Prot:Q9VLV5" /translation="MAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEG HIVGFDEYMNIVLDDAEEVHMKTKNRKQIGRIMMKGDNITLIQNVNPNASV" gene <428063..>428512 /locus_tag="RR48_08441" mRNA <428063..>428512 /locus_tag="RR48_08441" /product="Biogenesis of lysosome-related organelles complex 1 subunit 2" CDS 428063..428512 /locus_tag="RR48_08441" /codon_start=1 /product="Biogenesis of lysosome-related organelles complex 1 subunit 2" /protein_id="KPJ07428.1" /db_xref="InterPro:IPR019269" /db_xref="UniProtKB/Swiss-Prot:Q9CWG9" /translation="MSEEDDTWTADRKNKDMRMFQSCSSFELSDPHDPVLSRLATQMF KRTNDYLQGEMTAGQDHYVLLEEINRLVITKYADLRSLAVNLTKSINESNEKYETEIK PLLQHIEDIDNEMSVLEATAFRLDSYTKQLLARFVELLDIDNNSNEK" gene complement(<429205..>436761) /locus_tag="RR48_08442" mRNA complement(join(<429205..429236,429426..429588, 429902..430058,436577..>436761)) /locus_tag="RR48_08442" /product="BTB/POZ domain-containing protein 19" CDS complement(join(429205..429236,429426..429588, 429902..430058,436577..436761)) /locus_tag="RR48_08442" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="BTB/POZ domain-containing protein 19" /protein_id="KPJ07429.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="UniProtKB/Swiss-Prot:C9JJ37" /translation="MAALSSRVAGACCAASVERAGLPGLLRDLLRLAEDQDSADVVFI LGTAEEKVYAHRIILFARCKSFQNTKRGEICRIPGCTVSPSVGTQPTPIRMPHVQPET FRLFIQYVYTGKLLLQDSGVFEMMTLAADLGVEDLRAACEDHVTSTLSVESACTLLAA AMEIQDRPARQSSRIILR" gene <490452..>509856 /locus_tag="RR48_08443" mRNA join(<490452..490608,504859..505062,505555..505711, 509754..>509856) /locus_tag="RR48_08443" /product="hypothetical protein" CDS join(490452..490608,504859..505062,505555..505711, 509754..509856) /locus_tag="RR48_08443" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07430.1" /translation="MEGNRVFQKSPLCFFPAASPSRKLTIDLMERIKCRLDLHTIQGR SGSYKLFNSRASVQLSTPSWRTTKGCDYIGPRATRLPHAGLRINQLSRRNLTPTWKSA SIAYWRELPSFCCFLPFSTIINASDKQQSTRVTSPFVYVYAATCALHSSDHTCVCEQS REAAADYEARSVSITTNDKELNRLSESQPAGCRARGRPRLAHSYYD" gene <581061..>583018 /locus_tag="RR48_08444" mRNA join(<581061..581255,581678..582556,582602..>583018) /locus_tag="RR48_08444" /product="Frizzled-2" CDS join(581061..581255,581678..582556,582602..583018) /locus_tag="RR48_08444" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004888 - transmembrane receptor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007166 - cell surface receptor linked signaling pathway [Evidence IEA]" /codon_start=1 /product="Frizzled-2" /protein_id="KPJ07431.1" /db_xref="InterPro:IPR000539" /db_xref="InterPro:IPR017981" /db_xref="InterPro:IPR020067" /db_xref="UniProtKB/Swiss-Prot:Q9VVX3" /translation="MCAGVRGAWRALAVLVALSCLVGCGALQQPRCEEITIPMCRGIG YNLTSFPNALDHDTQEEAGLEVHQYWPLVEIKCSPDLKFFLCSVYTPICIEDYAKPLP ACRSVCERARAGCAPLMQKYGFQWPERMACEKLPKMGEPDQLCMDENERAQEPEPPRP PPRRPHKPCKDPKNCESAAGGEGGGEECACACRAPLVSVRAHNASVPGLANCAAPCRG PFFSREEKEFAAVWIALWSGLCAISTLMTLTTFLIDSQRFKYPERPIVYLSACYFMVA LGYLARLVLGHDEIACDGAVIKTSANGPSACTLVFILVYFFGMASSIWWVVLSFAWFL AAGLKWGNEAIAGHAQYYHLAAWLGAGARAGCGASRAAPPAARARSTPRSCSSTSWRW PWASPRASGSGPARRWSRGGASGAAAAARTARSPRAACDASPPRRTPRRPPRTLRSAR RTRRPRPPRPRPRPPRPRSAPDSRSPTTAPSSDPLVHIAALRLKSS" assembly_gap 582557..582599 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<586710..>589481) /locus_tag="RR48_08445" mRNA complement(join(<586710..586916,587091..587187, 587307..587586,587669..587846,587956..588116, 588196..588298,588369..588524,588769..588864, 589371..>589481)) /locus_tag="RR48_08445" /product="hypothetical protein" CDS complement(join(586710..586916,587091..587187, 587307..587586,587669..587846,587956..588116, 588196..588298,588369..588524,588769..588864, 589371..589481)) /locus_tag="RR48_08445" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07432.1" /db_xref="InterPro:IPR007889" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR011526" /translation="MLCQEMPGYGCYKFKREPASEGDDSSSQSAHDIFYHQRVLMLQA TPLPAAVKVEATEQDASSQILHHLQVGVGLELCPPAPAAPAATPVHARRTPHDTPASP RSPHAAHCFETLEPARAHTGTTLLDRHLRLIADAAEPDLMPLLSVKDEPLSEGEQQML SDEASSCGGSSEGAEARGGDSPPGPRAWGPRDMQRALQALRDRRMTLTKASATYGIPS TTLWQRARRLGIDTPKRETTARSWGEAELLAALAALRAGTLSANKASKAYGIPSSTLY KIARREGIRLAAPFNAAPTRWRRGDLQRALAAIRCGAASVQRAAAQYGIPSGTLYGRC KREGIELSRANPTPWSEHAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQ SQCLQYQQSDTRNNYEADQEMQTRQESLAQEQVEVPYSQLVGEAHGVLAHWQDCAPGL LHAHGCSGLAYS" gene <593424..>600706 /locus_tag="RR48_08446" mRNA join(<593424..593597,594020..594277,597793..597994, 600216..>600706) /locus_tag="RR48_08446" /product="Longitudinals lacking protein, isoforms A/B/D/L" CDS join(593424..593597,594020..594277,597793..597994, 600216..600706) /locus_tag="RR48_08446" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Longitudinals lacking protein, isoforms A/B/D/L" /protein_id="KPJ07433.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="UniProtKB/Swiss-Prot:Q7KQZ4" /translation="MDDDQQFCLRWNNHQSTLVSVFDTLLEKGIHVDCTLAAEGQTLK AHKVVLSACSPYFENVLSQQYDKHPIIILKDVKYAELRAMMDYMYRGEVNISQDQLAA LLKAAESLQIKGLSDNKPSRPPSRPAQAAPAHPPRAPSPPPQGRSSSSERRGGSLSPS RRRKVARRSLDAEPTSEPPPSEEAPPSRDTVEDLTIDEDPDQTPQHNDVVRKSSVLKC ELKYAKTSIPITRSYLKKEKSPNRQIYETLEIKTEKEFKVKQEKKPGFKSPQSIARKE GSLKKMKQDITLVVKQISKRGRKKKMAAERHGGNKDKKYVCSICNKRHYKYKRNRLRH EKYECNTGPQFGCELCGKRYSQKKTLVFHLQHKHRHPTTS" gene <601202..>601714 /locus_tag="RR48_08447" mRNA <601202..>601714 /locus_tag="RR48_08447" /product="Longitudinals lacking protein, isoforms A/B/D/L" CDS 601202..601714 /locus_tag="RR48_08447" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Longitudinals lacking protein, isoforms A/B/D/L" /protein_id="KPJ07434.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q7KQZ4" /translation="MTRSKKINEESGNTTTLAILKNVTSANSPPEDAKENKRQPQPVA APAAPPAPVAPAAPAAPVAPVEVKQEARYNVFPRGGSQLPCAQYKTDKGYRCPNCQRC YNARKNLVRHVTLECGREPQYKCPHCAYSKHRRNELKKHIEKKHPASPHAAPRAAPHA PHAPHAALVK" gene <602147..>602884 /locus_tag="RR48_08448" mRNA <602147..>602884 /locus_tag="RR48_08448" /product="hypothetical protein" CDS 602147..602884 /locus_tag="RR48_08448" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07435.1" /translation="MCSIAELHKELPSALLSLLSARQPAALAPSRLQLAAALHAPAAL DALAAVPDTMKPLLLQHAFLQNNNTLALADYKPKRDDHDSDAEYDDTDDIVLPDETET MYESAGVGLGAGRGLGARSTPTRRSTPRPRARGTASGRERLGRGESAVRVPTLRQEVP LEVHSAPPRERGVRRQGARAPVSLLLVPRQAARQPRRAHPQAPPRRVVRLRQQQGAPQ QEDLLLRVVLVHALLVHNVRNGNVRPK" gene <604703..>605092 /locus_tag="RR48_08449" mRNA <604703..>605092 /locus_tag="RR48_08449" /product="Longitudinals lacking protein, isoforms A/B/D/L" CDS 604703..605092 /locus_tag="RR48_08449" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Longitudinals lacking protein, isoforms A/B/D/L" /protein_id="KPJ07436.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q7KQZ4" /translation="MTWWVTWVSGPEDVSFSRIGGLSWEQWSARLALPLCGGVRGGRE AAREPRDGRDACFACPDCGRGYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIA RHMERMHRELHVKPEPYIKQDNVDACM" gene <606120..>607471 /locus_tag="RR48_08450" mRNA join(<606120..606162,607188..>607471) /locus_tag="RR48_08450" /product="Longitudinals lacking protein, isoforms A/B/D/L" CDS join(606120..606162,607188..607471) /locus_tag="RR48_08450" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Longitudinals lacking protein, isoforms A/B/D/L" /protein_id="KPJ07437.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q7KQZ4" /translation="MFLNIVSYRDSNDVLAQLYSPYILGYGTSGLAAGGGGKARWTLH ECGDCGNKYKHKGSLQRHMKYECRKQPSFKCPYCVYRAYQKHNLLLHERHLHKDLPEK VDFVSE" gene <609833..>610096 /locus_tag="RR48_08451" mRNA <609833..>610096 /locus_tag="RR48_08451" /product="Longitudinals lacking protein, isoforms A/B/D/L" CDS 609833..610096 /locus_tag="RR48_08451" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Longitudinals lacking protein, isoforms A/B/D/L" /protein_id="KPJ07438.1" /db_xref="InterPro:IPR007087" /db_xref="UniProtKB/Swiss-Prot:Q7KQZ4" /translation="MMQNMLPIVPMKTKNYWSRYETSFECEKCKRKYRHKSTYRRHVT YECGKEPMFRCPFLECTYKAYQKTHTDAHIKTKHKVTALEYKR" gene <611354..>612377 /locus_tag="RR48_08452" mRNA join(<611354..611425,611706..611861,611938..612105, 612234..>612377) /locus_tag="RR48_08452" /product="Cytochrome c oxidase assembly protein COX11, mitochondrial" CDS join(611354..611425,611706..611861,611938..612105, 612234..612377) /locus_tag="RR48_08452" /note="GO_function: GO:0005507 - copper ion binding [Evidence IEA]" /codon_start=1 /product="Cytochrome c oxidase assembly protein COX11, mitochondrial" /protein_id="KPJ07439.1" /db_xref="InterPro:IPR007533" /db_xref="UniProtKB/Swiss-Prot:Q6P8I6" /translation="MIALGIATVGLSYAAVPLYRIFCQAYSYGGTTGQAEPAETVSNM KAVRERPIKVRFNADVASSMQWNFKPQQSDITVLPGETALAFYTARNPTDKPVVGIST YNVIPFEAGQYFNKIQCFCFEEQMLNPHEQVDMPVFFYIDPEFTEDPKMEYVEEIVLS YTFFEAKEGVKLPIPTFVK" gene complement(<612870..>615564) /locus_tag="RR48_08453" mRNA complement(join(<612870..613080,613230..613384, 613520..613650,613830..613962,614098..614217, 614425..614522,614614..614755,614827..614917, 614997..615248,615321..615460,615538..>615564)) /locus_tag="RR48_08453" /product="Tektin-3" CDS complement(join(612870..613080,613230..613384, 613520..613650,613830..613962,614098..614217, 614425..614522,614614..614755,614827..614917, 614997..615248,615321..615460,615538..615564)) /locus_tag="RR48_08453" /note="GO_component: GO:0005874 - microtubule [Evidence IEA]; GO_process: GO:0000226 - microtubule cytoskeleton organization [Evidence IEA]" /codon_start=1 /product="Tektin-3" /protein_id="KPJ07440.1" /db_xref="InterPro:IPR000435" /db_xref="UniProtKB/Swiss-Prot:A6H782" /translation="MAKEVSMCTQLQQWSPVKPTGSTPSVPPQVGYCFHTPKKHPWRP IMGYEEIEVTPMPSQPITNTMVDPCYTSEGMAAEPLRFPNLVTGFDRSPEHAARAALY TRYTQHEWNQNSIRNYNESDAKRNFSERVRNDIMRMLRETDEIGAQGQRDSGRKIGER ITDTTFWRNEVAIEMERLVATCERLTDTRRQLERAVAGIEGPLHIVQECLYHREKRQG LEQVHDTVEQSLLKEVAILRECQDKFRNMLEKVRQQAKNCRATQHELESDMRNKEYAL GIDNMCHQLNNFSKGLQFYAGIERYDPTVCDAQRWAAASAATLQRSQSERAKAVQMLS DTDNLINVSATEIWDQWSNTNSAFTRRIAETIEIKNKLQLHLHKVQNEIFDIEKTLEL LNKAIEDKLQPMKVAHSRLQARTNRPHLEKCRDYAQTRLVKEVCDLQETMEQLRSKIA TAEGTHQTLLGVRASLEADLRNKAATLFIDRDQCMGLRRGYPVTAAIKA" gene <616054..>620766 /locus_tag="RR48_08454" mRNA join(<616054..616084,616163..616243,616597..616757, 618830..618931,619573..619663,619822..619893, 620186..620379,620450..620639,620735..>620766) /locus_tag="RR48_08454" /product="Cytosolic Fe-S cluster assembly factor NUBP1-like" CDS join(616054..616084,616163..616243,616597..616757, 618830..618931,619573..619663,619822..619893, 620186..620379,620450..620639,620735..620766) /locus_tag="RR48_08454" /codon_start=1 /product="Cytosolic Fe-S cluster assembly factor NUBP1-like" /protein_id="KPJ07441.1" /db_xref="InterPro:IPR019591" /db_xref="UniProtKB/Swiss-Prot:Q16T79" /translation="MSNVPENAPNHCPGTQSEDAGKASACAGCPNQNICASGVPAGPD PAIELIKNRLSNVKHKILVLSGKGGVGKSTLTSLLGHGLAARFPDKNIGILDADICGP SQPRMLGVRGEQVHYSGSGWSPVYVGDNLSLMSIGFLLGSPDDAVIWRGPKKNGMIKQ FLSEVEWGELDYLLIDTPPGTSDEHLSAVQYLSGAGLSGALVVSTPQEVALLDVRKEL HFCRKLGVRVLGVVENMAVFVCPNCKSRSEVFPATTGGAAAMCEELEVPLLGALPLEP LLARATDAGHSYLQLHPPASQTLAAMEQILDKIVAACESTS" gene <621571..>622477 /locus_tag="RR48_08455" mRNA join(<621571..621687,621951..622150,622315..>622477) /locus_tag="RR48_08455" /product="FAD-linked sulfhydryl oxidase ALR" CDS join(621571..621687,621951..622150,622315..622477) /locus_tag="RR48_08455" /note="GO_function: GO:0016972 - thiol oxidase activity [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="FAD-linked sulfhydryl oxidase ALR" /protein_id="KPJ07442.1" /db_xref="InterPro:IPR006863" /db_xref="InterPro:IPR017905" /db_xref="UniProtKB/Swiss-Prot:P56213" /translation="MPSHDEEDKPCRACNDFKTWSKKQSKTKKEIPAPQTNAPSTEQE KRKDCPLDKDELGTSTWGFLHSMASYYPEKPSTSQAKDMDNFFKLFGEFYPCEPCAID FREDIKAHPPKTKSRDELAKWLCERHNTVNKKLGKPVFDCSKVHERWRDGWPDGSCD" gene complement(<623748..>631595) /locus_tag="RR48_08456" mRNA complement(join(<623748..623808,624254..624419, 624756..624946,625545..625770,626484..626590, 626861..627009,627105..627235,627417..627515, 627585..627714,627979..628079,629411..629574, 630120..630283,630393..630529,630795..631010, 631229..631412,631521..>631595)) /locus_tag="RR48_08456" /product="hypothetical protein" CDS complement(join(623748..623808,624254..624419, 624756..624946,625545..625770,626484..626590, 626861..627009,627105..627235,627417..627515, 627585..627714,627979..628079,629411..629574, 630120..630283,630393..630529,630795..631010, 631229..631412,631521..631595)) /locus_tag="RR48_08456" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07443.1" /translation="MSKSKVSAEWKKRVKSEYMRLRQMKRFKRADEVKVAWARNLRIM SEAIEARESETAERGRRPFWPPPSPSPSHESLMKRAEVTYTDSLGVVTTQQVPIRIIN SVNPIPTMYTWAPTQKNFMVEDETVLHNIPYMGDEVLDQDGTFIEELIKNYDGKVHGD KEGGFIDDQLFVDLVHALMTYQTKDEVAEERKERELRNSKEDKDKDTSKEGKEKEKDK EEVKDGDKKAVVDKQFPIFTIFQAISSQFPDKGTAQELREKYVELTSLRDPDALPPEC TPNIDGPLAESVPREQTMHSFHTLFCRRCFKYDCFLHRLQACHPGPNLSKRKGPDLKP FAEPCGPNCYMLLEGMREKLAREQAAGEEESGKAHAIDSPNDASSEDSNDSNRYQKGS NSNSSNSNWSSNGVGKGADPAAAADPAYNALGLTVGDIESEWTGSDQSLFRALHKVFP SNYCAIAQLMLSKTCQQVYSYWIRTGQEECRVEAELTPPRKKKKKHRLWSVHCRKIQL KKDSASHHVYNYTPCDHPNQPCDNMCPCLQSQNFCEKFCQCSSDCQNRFPGCRCKAQC NTKQCPCYLGVRECDPDLCVACGADAPSPGPAPPHAPPHAPPHAPALRQHAHVYCRNV SVQRGLHKHLLLAPSDVAGWGIFLKEAAHKNEFISEYCGEIISQDEADRRGKVYDKYM CSFLFNLNNDFVVDATRKGNKIRFANHSINPNCYAKVMMVNGDHRIGIFAKRAIQPGE ELFFDYRYGPTEQLKFVGIEREMEFL" gene <632983..>634893 /locus_tag="RR48_08457" mRNA <632983..>634893 /locus_tag="RR48_08457" /product="Uncharacterized protein C19orf43-like" CDS 632983..634893 /locus_tag="RR48_08457" /codon_start=1 /product="Uncharacterized protein C19orf43-like" /protein_id="KPJ07444.1" /db_xref="UniProtKB/Swiss-Prot:Q9D735" /translation="MSSYGAPGAWDGGPPGAEADYATQHAPPLAPPMPTTDPWTGVSY SSYGQPHFDYQHYAPTGYGYNYDSSYYSRSDGFYKYPDTRDAYSAAPSGYDYTRVRAR SRSPLGTAAGDRRQASYRSKSRSVSPYERKERSYSRKRDGSYDESSRKRHSKSRSKSR RAKYSSSDRSSSRSRSYSRSPLKKNTRKRSPSSESSHTEKSYVKRSHRDSDHSLTPPI KKSKIHSRNRSCSPIAKRSARKKSASVEREKVKHKERSYSSKEKRQSKTSSTRKQKEL SETPPKSYKKSDSSPTTPKIHKRSDHSLTPPRKYKSKGRRSPTPQRKPRDSSVTPPKC YARSRSSSSSDSNSISQKRLKRNHSGTPKSNHSRSRSVSSHSSESSRRSRSKSNHRSR RESVKRRSRSKGSLKRRSKSNSRSQSRRRTLSRGKGRNSTSKSKSKSRSRSHSRTPSD DERRGQFTVADRKRYWKMHRSRQEEKERAKSPQKEVKPPPGAVESTTVDDIEYGDPPE IEGPNFAEMLPTPDQVVQSLPSTSKSKPMALPIKNDGSFLEMFKKMQEDTKPTDEPEK KPIKKPVLPFIGKRRGGRVLKTGLVKKAKAIDEQTVDNTPKDAWSLYMQEVKKYRETS CEEERKTRPLVK" gene <635054..>636502 /locus_tag="RR48_08458" mRNA join(<635054..635133,635908..636030,636334..>636502) /locus_tag="RR48_08458" /product="Cytochrome c oxidase subunit 6B1" CDS join(635054..635133,635908..636030,636334..636502) /locus_tag="RR48_08458" /note="GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]" /codon_start=1 /product="Cytochrome c oxidase subunit 6B1" /protein_id="KPJ07445.1" /db_xref="InterPro:IPR003213" /db_xref="UniProtKB/Swiss-Prot:Q5RCT0" /translation="MPEMIKSPADIKTAPFDPRFPNQNQTRHCYQSYLDFHRCQKVRG EKYEPCNYFMRVYKSLCPNEWVEKHCYQSYLDFHRCQKVRGEKYEPCNYFMRVYKSLC PNEWVEKWDTQRSEGTFPGRI" gene complement(<637144..>637682) /locus_tag="RR48_08459" mRNA complement(join(<637144..637309,637618..>637682)) /locus_tag="RR48_08459" /product="Cytochrome c oxidase subunit 6B1" CDS complement(join(637144..637309,637618..637682)) /locus_tag="RR48_08459" /note="GO_component: GO:0005739 - mitochondrion [Evidence IEA]; GO_function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]" /codon_start=1 /product="Cytochrome c oxidase subunit 6B1" /protein_id="KPJ07446.1" /db_xref="InterPro:IPR003213" /db_xref="UniProtKB/Swiss-Prot:Q5RCT0" /translation="MCDQEFRTLRFDPRYPFQNQTKACYDNYCDFYKCTRLLGDVDDC KIFKRYFETICPNFWISQWDEQRAKGAFPGPI" gene complement(<640121..>641891) /locus_tag="RR48_08460" mRNA complement(join(<640121..640228,640851..640931, 640949..641053,641360..641521,641706..>641891)) /locus_tag="RR48_08460" /product="Oxysterol-binding protein-related protein 11" CDS complement(join(640121..640228,640851..640931, 640949..641053,641360..641521,641706..641891)) /locus_tag="RR48_08460" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Oxysterol-binding protein-related protein 11" /protein_id="KPJ07447.1" /db_xref="InterPro:IPR001849" /db_xref="UniProtKB/Swiss-Prot:Q9BXB4" /translation="MMKATGLGSHRPLSGQLYKYTNVVKGWQQRWFAVDPETGVLSYY LFDGPGDTIQPGQPARGEAHLAAAVICPSDEDSRTFTINCASGDMLKLRATDARARQE WVNGLRAIAEIHTKAMGANPPLQPREQLAVHDAMASARQQLHLEIIDYDSDAALARCI ESSDSPFLHTDPDLLLLKATSAASMQCLLQCLGILHRQQQCATLSGKHADNDH" gene <642487..>649117 /locus_tag="RR48_08461" mRNA join(<642487..642579,643028..643103,645647..645757, 646286..646500,647249..647346,648197..648360, 648972..>649117) /locus_tag="RR48_08461" /product="Aprataxin and PNK-like factor" CDS join(642487..642579,643028..643103,645647..645757, 646286..646500,647249..647346,648197..648360, 648972..649117) /locus_tag="RR48_08461" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Aprataxin and PNK-like factor" /protein_id="KPJ07448.1" /db_xref="InterPro:IPR008984" /db_xref="InterPro:IPR019406" /db_xref="UniProtKB/Swiss-Prot:Q8IW19" /translation="MFKLVRIDDEGHQEIPLSDGKQIIGRGNLLQCDDKRVSRNHAEL EVVDDSIIVKAVTSEDCNKSEKELTEEQISNETVNEEYDDKAPVSPSILTDNLKSQEL ILNNESKDQQSNEIKSEEQSDDGHQSPGKRSLIKQELTSPVDIKKLKTEDNAEENPQS PASQASTSSGASSASISSPSKEQKPKRERCMYGEKCYRKNPQHKAQFSHPGDSDWGSG AQAPCPWGYACARRDPRHWRDHSHPYGMHPPPPQGIQKKKTHIVQRNGKIFYINAHSV NFYDDHFEAEDSDGDSVDYDYEFD" gene <649781..>650008 /locus_tag="RR48_08462" mRNA <649781..>650008 /locus_tag="RR48_08462" /product="hypothetical protein" CDS 649781..650008 /locus_tag="RR48_08462" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07449.1" /translation="MTGRRKKRTKRSSSGETPVEDLILTGKRSRKTIQRETWSGSESE EEDPYGTDDSDDWQPPSNVSETQDYSQASQL" gene complement(<650576..>652507) /locus_tag="RR48_08463" mRNA complement(join(<650576..650763,651706..652127, 652201..652338,652455..>652507)) /locus_tag="RR48_08463" /product="Translin-associated protein X" CDS complement(join(650576..650763,651706..652127, 652201..652338,652455..652507)) /locus_tag="RR48_08463" /note="GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]" /codon_start=1 /product="Translin-associated protein X" /protein_id="KPJ07450.1" /db_xref="InterPro:IPR002848" /db_xref="UniProtKB/Swiss-Prot:Q9QZE7" /translation="MSGRGYYYKTINIAYVQNPILAIFKSAAVKLNDRQDRHERLVKL SRDITIESKRIIFLLHSAITKETCEKAVSEAIIRLQKLAKGPIKSIGLELENIPSYLH WRAVTPGFQEYVEARTLCSLMQTQNIITFQEMQDELTYKIEDEANDKERSVITMLTQN DYMLGIADLTGELMRRAINSIASGDSEECFNCCQNVRDLYTGYLGVTGCSRDLIRKLS TTRRNVEKVEAAVYALRVRGGEAPPALLAAAPPSWDAASTHSDDEGFY" gene <653256..>654949 /locus_tag="RR48_08464" mRNA join(<653256..653396,653586..653837,654383..>654949) /locus_tag="RR48_08464" /product="hypothetical protein" CDS join(653256..653396,653586..653837,654383..654949) /locus_tag="RR48_08464" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07451.1" /translation="MEDRRHRLTRTLCVNCNICVNTLRRYLALTLDPRVTSLICSWVY PQIITEEDVVCEACRDLAMFAVNENLQQEVSNSGEQAGPSHRGHAHVCLLCGCSIARR QSDKILKDSPTDLQRSIIAIIESRVAIRPISESDRVCHACWLRTKRESQRMNRIDDAR SQQSVPEVTQSQDFVSPDQSTLNVEIILPNYRRAANTNNHCVFPHCSNTTLRGISDQL RAIVLNSYHYYLPELARICDEHLESYTWDTLFDSDKSISTFTARQIQHVFSFVNAFNP TLDFKNIEEMDERLFIYLIGYTKEKFNTLLEEVPRVKRYVREP" gene <655355..>656236 /locus_tag="RR48_08465" mRNA <655355..>656236 /locus_tag="RR48_08465" /product="hypothetical protein" CDS 655355..656236 /locus_tag="RR48_08465" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07452.1" /translation="MISLFQDGSPLRSYFIEDDVFILDRGFRDSINLLEECGYRPCMP DSLLEGEHQLTTEQANQSRCVTLCRWVVEAVNGHLKRDFKLLRQDYFHRALPHMMQNF QIAAALLNRFGVRFQDSVYANEILEVIRERRNLTNNLANMVQQTNMNRRTTQFQSITA DRNNLLYFPRLDYSELILFALGTYQIRQARSYYGEHIRFQGGYRIEVSSGEHDSAGYN LRGNGVTTLIRGRIKSRHISRKQYYVYILIENDVPGRTAIVEYCCSCLVGRRTLGCCA HVTLIWYLRWARHKKKL" gene <658005..>659390 /locus_tag="RR48_08466" mRNA join(<658005..658077,658339..>659390) /locus_tag="RR48_08466" /product="Actin-related protein 2/3 complex subunit 1A" CDS join(658005..658077,658339..659390) /locus_tag="RR48_08466" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Actin-related protein 2/3 complex subunit 1A" /protein_id="KPJ07453.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="UniProtKB/Swiss-Prot:Q9R0Q6" /translation="MSQTLTFGDSCAPITCHAWNKDRTQIAFSPNNNEVHIYQKEGNE WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWTTTLVLLRINRA ATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTTLDWHPNNML LVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEFPNSPSGGGWVHSVSFS ADGNKVAWVGHDSSISIADATQGKSMIKIKTEYLPFLGCNWISNNSLLVAGHSCIPLL YCHDGNELRFVAKLDNTQRKESGGLSAMKKFQSLDRQARIETSDTYLDSIHQNAITCI SLYKGTKANAKKFSTSGLDGQLVIWDLDSLERSIEGLKIV" gene complement(<659961..>667280) /locus_tag="RR48_08467" mRNA complement(join(<659961..660098,660751..665624, 667157..>667280)) /locus_tag="RR48_08467" /product="Brefeldin A-inhibited guanine nucleotide-exchange protein 1" CDS complement(join(659961..660098,660751..665624, 667157..667280)) /locus_tag="RR48_08467" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_process: GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA]" /codon_start=1 /product="Brefeldin A-inhibited guanine nucleotide-exchange protein 1" /protein_id="KPJ07454.1" /db_xref="InterPro:IPR000904" /db_xref="InterPro:IPR015403" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:O46382" /translation="MQTNLKTKEMFIVRALEKILADKDIKRSYHNQLKKSCEVALEEI KTELKNGGQPESSESPTSGTLPLPKNDASNIITAEKYFLPFELACQSKASRIVVTALD CLQKLIAYGHLTGNIPDSTTPRKLLIDRIVETICSCFNGPQTDEGVQLQIIKALLTVI TSQHVEVHEGTVLLAVRTCYNIYLASKNLINQTTARATLTQMLNVIFTKMENQALETE TNTNITESNKIPNGNVVTEESNSNNESEENKDQNSVPDEPADEVLEAKIIAKQIVDSV IDNAISIASKKSEDDVSQNIPDNNENPSDSQDSVSVSQENSEQIPNESSITRIPSQES VDVASENDNSVTAKFTHVLQKDAFLVFRALCKLSMKPLPEGTPDPKSHELRSKILSLH LLLSILQNAGPVFRNNEMFITAIKQYLCVALSKNGVSSVPEVFELSLAIFLALLQNFK IHLKKQIEVFFKEIFMNILETSSSSFEHKWMVIQALTRICGDAQSVVDIYVNYDCDLS AANLFQRLVNDVSKIAQGRQALELGATPNQEKSMRIRGLECLVSILKCMVEWSKELYI NPNMQTTLGERTIKEDSDHHSIKSHGGSSLSLVSTGSSNIGNRETLDSPEQFEVLKQQ KEVWETGIDLFNRKPKKGVAFLQEQGLLGTSTKEIAEWLLTDERIDKIFIGEYLGEND DHSKEVMYAYVDSMNFSNMDIVAALRHFLEGFRLPGEAQKIDRLMEKFAARYCECNPT NTLFMSADTVYVLAFSIIMLTTDLHSPQVKNKMTKEQYIKLNSGISDNNDLPREYLSQ IYDEIAGHEIKMKNTSKPGQHRIANEKKRKFIWNMEMEQISTAAKNLMESVSHVQTPF TTAKHVEHVRPMFKMAWTPFLAAFSVGLQDCDDTEIASLCLDGIRCAIRIACIFHMSL ERDAYVQALARFTLLTANSPITEMKAKNIDTIKTLITVAHTDGNYLGSSWLDVVKCIS QLELAQLIGTGVRPQFLSGSGIKPQPDALKFSLMALDPSVKEHIGETSSQSVVVAVDR IFTGSTRLDGDAIVDFVKALCQVSIDELSHPTNPRMFSLQKIVEISYYNMGRIRLQWS RIWQVLGDHFNKVGCSSNEDIAFFAVDSLRQLSMKFIEKGEFANFKFQKDFLRPFEHI MKKNSSPTIRDMVVRCIAQMVNSQAPNIKSGWKNIFSVFHLAASDQDEAIVDLAFQTT GKIISELYEKQFQAMIDSFQDAVKCLSEFACNAKFPDTSMEAIRLVRSCATAVGASPQ LFAEHAGLEGEPGAPEEDRVWLRGWFPLLFSLSCVVSRCKLDVRTRGLTVLFEIIKTH GESFRPHWWRDLFNILFRIFDNMKLPEHQLEKNEWMTTTCNHALYAIVDVFTQYFDIL GSLLLEQLYAQLHWCVQQDNEQLARSGTNCLENLVISNGMKFSEDTWSKTCQIMLDIF NSTLPTTLLTWKPDENDDGETPHVRHGILKKPQGGDESKSSNRVFNSLLIKCVVQLEL IQTIDNIVFYPATSRKEDAETLALAAAELTGGTPGTEQECQREEQGMYRLLSSPHLLR LVECLMCSHRFAKTFNTNNAQRNVLWKANFKGSVKPNMLKQETQSLACVMRILFKMYS DEARRNHWPAVQSSLIKICCEALEYFVGLTNEAHRDAWTSILLLILTRILKMPDERFA AHVSSYYPLLCEITCFDLKPELRTVLRRVFIRIGPVFNIVSTQ" gene <667956..>670115 /locus_tag="RR48_08468" mRNA join(<667956..668168,668243..668467,668727..668997, 669295..669427,669959..>670115) /locus_tag="RR48_08468" /product="Mitotic checkpoint protein BUB3" CDS join(667956..668168,668243..668467,668727..668997, 669295..669427,669959..670115) /locus_tag="RR48_08468" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Mitotic checkpoint protein BUB3" /protein_id="KPJ07455.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="InterPro:IPR020472" /db_xref="UniProtKB/Swiss-Prot:Q9WVA3" /translation="MTVTRVAESRTEFKLKNLPEDAISSVKFAPKSSQFLLVSSWDCS VRLYDVTSNVERHKYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTETVLGEHK GAIRCVEFASEVNAVLTGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVG TSGRKIFVWDVRNMGHVNQRRESSLKYQTRCIRVFPNKQGYVLSSIEGRVAVEYLDSN PEVQKKKYAFKCHRIKDGGLEKIYPVNAISFHSVYNTFATGGSDGYVNIWDGFNKKRL CQFHRYNTAVSALSFSHDGSALAIACSQLDESQVEDPKPEDTIYIRYVTDQETKPK" gene complement(<711015..>712379) /locus_tag="RR48_08469" mRNA complement(join(<711015..712049,712269..>712379)) /locus_tag="RR48_08469" /product="Knirps-related protein" CDS complement(join(711015..712049,712269..712379)) /locus_tag="RR48_08469" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Knirps-related protein" /protein_id="KPJ07456.1" /db_xref="InterPro:IPR001628" /db_xref="UniProtKB/Swiss-Prot:P13054" /translation="MALHNEAKSQGQDKSKPYIKAANRPEPSLWPISNGNDSFFGRSY NNLNSITECKNNGECVINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL QEQQQAAQSRSPPKVPPSPHHLAPPFPPHLFPGLARPRTKEELALLGLDDYKAPCSGS PDSHRSGSSPKLDEKSRLTQSRPPDRPLTPPRDAYVPLPLANITLPHFPHSPFLPPPP FSPFAANHPLLFPPGFHPIYSRHLLDHAALRQAAENNNDVRIDDHNADSSKRFFLDEI LKHQRSTQPTPQEDVISEAEFVPTPPAERRTSESPLQENPMDLSVKSDGRSSSARRRS DDSEIIAPDNEDGDSVSAGGSVSDEEDMAYTQIKRIKLHPLDLTTKV" assembly_gap 764217..764523 /estimated_length=307 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 879726..879758 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 886523..888255 /estimated_length=1733 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 899353..899519 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 906945..908177 /estimated_length=1233 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <972924..>973724 /locus_tag="RR48_08470" mRNA <972924..>973724 /locus_tag="RR48_08470" /product="Protein embryonic gonad" CDS 972924..973724 /locus_tag="RR48_08470" /codon_start=1 /product="Protein embryonic gonad" /protein_id="KPJ07457.1" /db_xref="UniProtKB/Swiss-Prot:P15370" /translation="MSKSGSRYGRRSNWFKIHCLLQEQQQQHIQQMQTSKSPPTFNSN INPSFLPTNLLPAAALAEYYKSSEKIPFGEEVTRQSVSPSDSGASSADPEDDNSSRST SGLSIFRPASSPCSEKDVRLQALRNQSKELRRKKPSTLPPSPFSTASATPSYPSRGTS FLPLPTAIQNFRSIPPGVPAWPSRNGGDLLLHSPAVAGVAIEQDQPIDLSIKSTAVLF RSPKRDEVSDSEPELSIDLNEDNAKEIMKNPLDLSLVPKRTEEVPMTG" assembly_gap 985550..985696 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1001332..1001781 /estimated_length=450 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1035284..1035527 /estimated_length=244 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1045859..1046255 /estimated_length=397 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1052787..1052831 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1060609..>1079948) /locus_tag="RR48_08471" mRNA complement(join(<1060609..1060723,1061046..1061190, 1061351..1061468,1061591..1061692,1061780..1061929, 1062055..1062120,1062446..1062617,1062826..1062992, 1063214..1063327,1063464..1063547,1063917..1064052, 1064204..1064421,1064512..1064639,1066086..1066175, 1066624..1066794,1067021..1067264,1077128..1077260, 1077353..1077511,1077855..1077982,1079751..>1079948)) /locus_tag="RR48_08471" /product="Adenylate cyclase type 2" CDS complement(join(1060609..1060723,1061046..1061190, 1061351..1061468,1061591..1061692,1061780..1061929, 1062055..1062120,1062446..1062617,1062826..1062992, 1063214..1063327,1063464..1063547,1063917..1064052, 1064204..1064421,1064512..1064639,1066086..1066175, 1066624..1066794,1067021..1067264,1077128..1077260, 1077353..1077511,1077855..1077982,1079751..1079948)) /locus_tag="RR48_08471" /note="GO_function: GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO_process: GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]" /codon_start=1 /product="Adenylate cyclase type 2" /protein_id="KPJ07458.1" /db_xref="InterPro:IPR001054" /db_xref="UniProtKB/Swiss-Prot:Q9VW60" /translation="MLKMADACADTSKQTRFHEMHVQRHNNVSILYADIVNFTPLSER LSASDLVKTLNELFGRFDQIAQENQCMRIKILGDCYYCVSGLPVSRPNHAYNCVNMGL QMIDAIRFVREATGFNVDMRIGIHTGNVLCGVLGLRKWQFDVWSDDVTLANHMESGGI AGRVHITKATMLQLGGRFEVEPGEGAAREGYLADHKVETYLIVPPRIRCLSSDVYAIR LFQKPSGIAENGRLSVCTVDRKGSVVSSLYQDVSPTKPRDNISPAPSQHSFVEQETTK VLRSESLRYPGEINRRASVKVEGPRTVAFENNNTTNTGDGISNGAVVSAKPKSRSGSI IGAISPIMGTDSVINLHQEMEAARPPLFLRMISTISMETSTTPGVPSRSRPSSKMTKY VECWGADKPFANITDSTLAKNIGISSLAMIEQNLLPQRTCCECGSSSEGMSRATLWFT RGDQERQYRDQSDDQFKYNVACATALFVLLAFIQLLTVPKSIVMYAAFGPTLLTLLVF LYLSWCDGRFAFSDVPDDYDNCYKPGQVVANNCYIRFTMFLVTVLLIGSCAVINLFQT FLVQEFPEEVWSTSNSTDSENITGVPLFVDVDSAPTFIYSSVLTLASISVFLRVGFVL KLFLMILTLVSHISLFASAELFSQYQKGEIDTEFSMLPYSAKAGLVLVFLAALLHILD RQIEFTSRTDFLWKDKLKFEQEEVETMRGINKILLENILPAHVAEHFLTSVASEEDLY HERYSSIAVMFASIPNYKEFYDETDVNKQGLECLRLLNEIICDFDKLLLKPKFSCIEK IKTIGSTYMIASGLRPGKEEQLDANRKEEHTVAILVEFAIALMTILDQINRESFQRFK LRIGLNHGPVIAGVVGAQKPQYDIWGNTVNVASRMDSTGLMGRIHVTEDTAKVLMNVG YTCECRGPTFVKGKGTLTTYFVKTPNFGGGI" assembly_gap 1068872..1069849 /estimated_length=978 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1073463..1076556 /estimated_length=3094 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1095698..1095842 /estimated_length=145 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1105960..>1120966 /locus_tag="RR48_08472" mRNA join(<1105960..1106104,1114490..1114623,1118667..1118836, 1120390..>1120966) /locus_tag="RR48_08472" /product="E3 ubiquitin-protein ligase sina" CDS join(1105960..1106104,1114490..1114623,1118667..1118836, 1120390..1120966) /locus_tag="RR48_08472" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase sina" /protein_id="KPJ07459.1" /db_xref="InterPro:IPR008974" /db_xref="InterPro:IPR013010" /db_xref="InterPro:IPR018121" /db_xref="UniProtKB/Swiss-Prot:Q86MW9" /translation="MIPFCPQFHSVTDKRSQNNEFGENSVTIVTEKKIEDDASSSGEN VEIEDKPLPIVDPTIDSSEEGHAAQCACPNCDEVLSRFSECSICLEPLQGCGPCVCPW CGGVWCARCSRRMSRCAWCRGSLRAPAAPCLALQRLINDLMLPCRNYRRGCTELLTTS TRAKHEEECKYDSMICPVTATCSSIAFEELSEHLQSQHNIIAVYSQKIKILIENFQTK LKKTACCRTKYKIILLYQKSAFIIKVCIYNFHVKVEVMRRKLGYIADVKSESKKSEYC ALIEFQSKALCTKSAILIENEAYSKKAEVQWNDIIMKSDTDEAITIHVNIGKSNAETF KKVNQTT" gene complement(<1127678..>1132890) /locus_tag="RR48_08473" mRNA complement(join(<1127678..1127755,1128384..1128578, 1129356..1129484,1132846..>1132890)) /locus_tag="RR48_08473" /product="Adenylate cyclase type 2" CDS complement(join(1127678..1127755,1128384..1128578, 1129356..1129484,1132846..1132890)) /locus_tag="RR48_08473" /codon_start=1 /product="Adenylate cyclase type 2" /protein_id="KPJ07460.1" /db_xref="UniProtKB/Swiss-Prot:Q9VW60" /translation="MATHHAPLPLFALILMVHTMMPIARRIALGMSACLILAYMGVAI GLGPAGQEDQFYQQLTCELALLLSASGIGLYYRVLTERAHRNTFAGTRTCLEQRVKLE CEREQQERLLLSVIPAYIAAEDKLRTYDTTAVTILIDYSYLILFLL" gene <1167675..>1175003 /locus_tag="RR48_08474" mRNA join(<1167675..1168006,1168214..1168498,1168677..1168889, 1169634..1169728,1170261..1170463,1171166..1171264, 1171893..1172022,1172213..1172302,1172421..1172525, 1172783..1172872,1173444..1173581,1173900..1174052, 1174506..1174699,1174899..>1175003) /locus_tag="RR48_08474" /product="hypothetical protein" CDS join(1167675..1168006,1168214..1168498,1168677..1168889, 1169634..1169728,1170261..1170463,1171166..1171264, 1171893..1172022,1172213..1172302,1172421..1172525, 1172783..1172872,1173444..1173581,1173900..1174052, 1174506..1174699,1174899..1175003) /locus_tag="RR48_08474" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07461.1" /translation="MDDGDENVHRLAGTSGDAPGGLIIKKKDKPQEFQFAKPSLLGLD KLAAAKRKQNRLISFQTEENESGESEDSNDSTGVKGRKYRKHNEETPTYTGGLSEQAR ERMLERLQKKEKETKEKGVHYSTKEEQKLKSRDDDDRSYLNRYDRRDRDRDRRRDDDY RKDRDRNRDRDSDRREKDRDRRDSERGSSRRSYYEPRFKDEPRTPNLKVLKPTDKTAW DDDDDDPKGAVRKSSWDFPTPLTRDSSSGDRSQRSERGRPLRDNKGKLYEYSSRATPH KWASSRRVVDIDDPDWEEVEKKLDRAWYNMGEGETDESDPFAGTSSEYIARKEEQIEK RRNRKVSAARQQIDRDNELWERNRMLTSGVVHAVNLNSDMDEESVDRVHLLVHNIVPP FLDGRIVFTKQPEPVIPVKDPTSDMAINARKGSALVKAFREQKERKRAQKKHWKLEGT KIGNIMGIQKEKEEIDDGPTRQAYKYAEHMDKEGQEPESKSDFVKKKTISEQRRYLPV FASREELMQGNIMGIQKEKEEIDDGPTRQAYKYAEHMDKEGQEPESKSDFVKKKTISE QRRYLPVFASREELMQVIRENSVVIIVGETGSGKTTQLTQYLHEEGYSERGTVGCTQP RRVAAMSVAKRVADEMGCKLGEEVGYAIRFEDCTSPKTVIKYMTDGILLREGLREPDL DNYCAIIMDEAHERSLSTDMLFGLLRETVNGLAIRCSFCAYLISAILALMVAVCSGGV DLN" assembly_gap 1174140..1174267 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1176739..>1178366) /locus_tag="RR48_08475" mRNA complement(join(<1176739..1176902,1178189..>1178366)) /locus_tag="RR48_08475" /product="hypothetical protein" CDS complement(join(1176739..1176902,1178189..1178366)) /locus_tag="RR48_08475" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07462.1" /translation="MPNIAWVDGWTQEWKKSEIAQRRNFVTDQLNDVENTYDHHLLMV VAALWTQSAGYLYNTDKRVAEMGQHWHEHGRNARKSKQRQGQGKVCLSVATQRQRRWL VLRLLLVTPEH" gene complement(<1178780..>1180552) /locus_tag="RR48_08476" mRNA complement(join(<1178780..1178932,1179619..1179794, 1180216..>1180552)) /locus_tag="RR48_08476" /product="hypothetical protein" CDS complement(join(1178780..1178932,1179619..1179794, 1180216..1180552)) /locus_tag="RR48_08476" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07463.1" /translation="MEARFVTCRSFQQIKPPEKSLAPQPTVKGLLSRFGSQAQALFAP KKPRFGSSVAIHKLRETKWFKHDEQNILCAVLETGFVLEVRAEDPLPPDSALSPDYHM YAIAMWKKGKEKTKNPEQIEVYTVQQKGVRKRVIKTTLSAFWKKDSVIRINNVDDKQE TPNSEKDIRAKLDMATKSRFERNWHNTLHFVHWCRYGETPQEARMRQVMPTYKYISRT FNC" gene <1212527..>1219893 /locus_tag="RR48_08477" mRNA join(<1212527..1212658,1216537..1216620,1216704..1216854, 1217004..1217101,1217215..1217442,1217808..1217979, 1218434..1218575,1218656..1218816,1219055..1219295, 1219707..>1219893) /locus_tag="RR48_08477" /product="hypothetical protein" CDS join(1212527..1212658,1216537..1216620,1216704..1216854, 1217004..1217101,1217215..1217442,1217808..1217979, 1218434..1218575,1218656..1218816,1219055..1219295, 1219707..1219893) /locus_tag="RR48_08477" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07464.1" /translation="MDSTKFSSFFGNVPTFTIPGRTFPVETFFSKNVCEDYVDGAVKQ ALQIHLQPDDGDILVFMPGQEDIEVTCEVLTDRLGELDNAPPLTVLPIYSQLPADLQA KIFQRAPPGQRKCIVATNIAETSLTVDGIMYVIDCGYCKLKVYNPRIGMDALQIYPVS QANARQRAGRAGRTGPGKAFCLYTQRQYTHELLPATVPEIQRTNLANTVLLLKSLGVR DLLAFHFMDPPPQDTILNSMYQLWILGALDGTGELTALGRQMAEFPLDPPQCHMLIVS AEMGCSAEVLIIVSMLSVPSVFYRPQGREEEADAAREKFQVPESDHLTLLHLYNQWKA NNYSSSWCTQHFVHAKALRKVREVRQQLRDILQAQRLPLVSCGTRWDTVRECICSAYF QQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGSPPDYVVYHELTMTSREYMHCVTAV DARWLAHLGPMFFSVKETGKSNRDKKKEAAVHLQRMEEEMKEAEQKMAEEKRKRDEEV PVKQEIATPGLNTPRRTPHRLGL" gene complement(<1221996..>1226603) /locus_tag="RR48_08478" mRNA complement(join(<1221996..1222288,1222370..1222407, 1222824..1222930,1223080..1223279,1224404..1224537, 1224941..1225014,1225978..1226090,1226293..1226459, 1226566..>1226603)) /locus_tag="RR48_08478" /product="Ancient ubiquitous protein 1" CDS complement(join(1221996..1222288,1222370..1222407, 1222824..1222930,1223080..1223279,1224404..1224537, 1224941..1225014,1225978..1226090,1226293..1226459, 1226566..1226603)) /locus_tag="RR48_08478" /codon_start=1 /product="Ancient ubiquitous protein 1" /protein_id="KPJ07465.1" /db_xref="UniProtKB/Swiss-Prot:Q6PBN5" /translation="MTLTVDKLFNKQRFTGDNLLQFLFYLPLGLLLMTLRIILGLILW IAAIILPDKSGVRQMLSTLACWTFGVYVKLKGNRDPRCSVMVANYVSCLDSLAASHVL GTISLRKWKVPPFFASTLGIRNASQFIRKQHFAESPSKPILLQPEGAPTNGRALLKFT DWPFPIGNRVQPIAINVERPMSAVCVRGGGGLARQLCEDALWYLTAPATVYTLRALPP LERGSDDDAAFSKRIAQTLADALQENFVMLHISEKKFNDMCEVNSHLAVVDYDLVTSN LGSIEDRVRISNALTKTRSVDVTITNFLEGITPYTPEVRPPSAQAQAPPPAEPRPGPS RDPPKYVIPAPTGVFPKTAKERQLSFQERKEQMIAEARKKYIEKHGIDVAINC" gene <1227393..>1229195 /locus_tag="RR48_08479" mRNA <1227393..>1229195 /locus_tag="RR48_08479" /product="Mucolipin-3" CDS 1227393..1229195 /locus_tag="RR48_08479" /codon_start=1 /product="Mucolipin-3" /protein_id="KPJ07466.1" /db_xref="InterPro:IPR013122" /db_xref="UniProtKB/Swiss-Prot:Q8R4F0" /translation="MERMQSSPDENTGTEEENETPERNLDNRRNVQGYSSCPTTSSNL NQMEEKMRRKLQFFFMNPIEKWQAKRKFPYKFVVQVIKIILVTFQLCLFAHNRYNHVN YTWDNRITFSHLFLLGWDSTREINAYPPGAGPLAVYKIDEFYNTLDYAYAGYANLSNA IGPYSYNDDNNNMPDPVFCLYNYKQGIIHGFNESYEFNSEINETCINFTIPDGQLLKS KHYIKDAGMEINFAALVRAKLMFSLKTINFRAAGPITPPECVRFDVEIIFDNEDHDGQ MSLVLEAEPYKLVCNGDKNYITDNKIDQILRSILNILVILICSASLMLCSRAIYRAQL LKELTVQFFRRAYNKELSWDGRLEFLNIWYIMIIVNDLLIIMGSAIKEQIERNQFTND QWNVCSLFLGLGNLLVWFGVLRYLGFFKTYNVVILTLKKAAPKIFRFSFCALLLYAGF MFCGWLILGPYHMKFRSLATTSECLFSLINGDDMFATFSIMSKKSPMLWWFSRVYLYS FISLYIYVVLSLFISVIMDAYDTIKQYYSEGFPKSDLQTFIGEPCIEEVSSGLYRTQS SSSLNAMMNSLFCCNFYRSAYSKIGGGGSNLNIL" gene complement(<1231929..>1234579) /locus_tag="RR48_08480" mRNA complement(join(<1231929..1233295,1233475..1233586, 1234484..>1234579)) /locus_tag="RR48_08480" /product="Facilitated trehalose transporter Tret1" CDS complement(join(1231929..1233295,1233475..1233586, 1234484..1234579)) /locus_tag="RR48_08480" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_function: GO:0022891 - substrate-specific transmembrane transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Facilitated trehalose transporter Tret1" /protein_id="KPJ07467.1" /db_xref="InterPro:IPR003663" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="UniProtKB/Swiss-Prot:B0WC46" /translation="MRVNLFGCFRKRRNPETEPLLSEAGPSRSQNEQTQGNNGMAEIG VSQAALVEPRGEGGRKLPQYIAALTATLGALAAGSMLGWSSPVIFKITQANSTDYDFE VSQSQGDWVSSLINLGAAAVCFPIGLIMDALGRKKTMLCLVAPFTLGWLLITFATNVG MLMAGRIITGIAGGAFCVTAPAYTSEIAQDSIRGTLGSYFQLMVTVGILFSYVVGSYT SVFVFNILCTIIPIIFGIVFFFMPESPNFLVVKGRNDEAKEALIRLRGRNYDVDTELD TLINKAEEAKNNPVSFLSAITKKTALKAILICYALMLFQQLSGINAVIFNTSAIFASA GAAIPSAIATIIIGVIQVIATFVSSLVVDKLGRRVLLLFSALVMCVCSTALGVFFFMQ GVHGPESSIVQAMSWLPLLSLSLFIIAFSLGFGPIPWMMAGELCLIDIKAFVGSTAGT LNWLLSFTVTSTFNSLNKSIGQGQVFWLFAGIMLVGFIFIFFVIPETKGKSVDEIQIM LGAEPQPQTNTTTTKK" gene complement(<1273083..>1285011) /locus_tag="RR48_08481" mRNA complement(join(<1273083..1273297,1273791..1273983, 1274680..1274808,1275470..1276028,1276618..1276824, 1281247..1281501,1284950..>1285011)) /locus_tag="RR48_08481" /product="TBC1 domain family member 14" CDS complement(join(1273083..1273297,1273791..1273983, 1274680..1274808,1275470..1276028,1276618..1276824, 1281247..1281501,1284950..1285011)) /locus_tag="RR48_08481" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005097 - Rab GTPase activator activity [Evidence IEA]; GO_process: GO:0032313 - regulation of Rab GTPase activity [Evidence IEA]" /codon_start=1 /product="TBC1 domain family member 14" /protein_id="KPJ07468.1" /db_xref="InterPro:IPR000195" /db_xref="UniProtKB/Swiss-Prot:Q9P2M4" /translation="MFLLMHRDQLTFSALGFILLIGVFPWKSSTSKTQESTTTGVTWR LFGSKSTNNLSVKTGSESQKSLTPVSSAANTPHHHKRQGSSASEKQFEDLVASSIALI QHDRPSNLPAKCSEEAMRHRLEHARMVQAARRRVEREAAARLARVHHALRHEERLATH AHEWSRTILPDWHNMKNAKRTLELWWSGLPPSIRGKVWQLAIENKLKISPEMYKDFVA KAKQKLLEAQQRRKKLKLKNREACGCQDKEKNDSDRESKEDKEVTEKSTTEDDEKPRL GMPRNFSEQNLKSLNVESCPKKCCSKSNPNLLEYNDECSMELIQLDIARTFPHLCIFQ PGGPYFDVLHELLAAYVCYRPDIGYIQGMSFIAAVLILNMEAPQAFVCFANLLDGPVL RAAFTRDGAAMQRLWKAYGRLLRYNLPALAELVAPELYLVEWLYTAFAKAMPLDAACR VWDVFLRDGDTFLFNAALGILHLYQDELKDMDFIAAAQFLTKLPEDLDPEALFKSISS ITMTLDGMSFEELASCCELETTLDDDVTVRL" gene <1301570..>1303694 /locus_tag="RR48_08482" mRNA join(<1301570..1301673,1303583..>1303694) /locus_tag="RR48_08482" /product="hypothetical protein" CDS join(1301570..1301673,1303583..1303694) /locus_tag="RR48_08482" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07469.1" /translation="MAKPTWLNQSQNRYLINNIDLLLYTPITSALTLLVTNGIQNEQT AVREKADRIGRVKATPVQPPRRVGRTT" gene <1303703..>1304837 /locus_tag="RR48_08483" mRNA join(<1303703..1304407,1304490..>1304837) /locus_tag="RR48_08483" /product="Retinol dehydrogenase 12" CDS join(1303703..1304407,1304490..1304837) /locus_tag="RR48_08483" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Retinol dehydrogenase 12" /protein_id="KPJ07470.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="UniProtKB/Swiss-Prot:Q96NR8" /translation="MFAITTITIATIAAAVYWIMNRHKPLKHLLSDFRYMLDMQGAGA GGLIDDWINIRRNKIELPDASRKIAVITGGARGIGTEVIRGLLKANVTVIMGIRKPDA AKKMMETMENGKNLHVFSLDLQSQKSVKEFANCVTKKFPEINYLINNAGIMYGDYKLT EDGIESQFAVNHLNHFYLTHLLLPALKKAGRVEEPSRVVNVSSCGHYPGKIFFDDINM KEHYDTIAAYAQSKLAQIMTTRYLNKLLESQDANVKFYSVHPGIVDTDLFENTTFNKL PWLKKIFFKTPEKGATPILFACFNKDIEERGGLYISNCVEGISNRYSKNVDNQKKLFN ISCELTGIDPDKFGQN" gene complement(<1305285..>1305746) /locus_tag="RR48_08484" mRNA complement(<1305285..>1305746) /locus_tag="RR48_08484" /product="hypothetical protein" CDS complement(1305285..1305746) /locus_tag="RR48_08484" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07471.1" /translation="MSTTPCAKGGMRLSEALDNIQLAYNPITKQLHFVSPKVEKPAET SDEVDKLSKKSSFSDEGNFSISTCEKSDTSDSPKSTLQWGGSVSGHQRGKDGGSFSST VSSLSECSLGSSASKEDEVDVNKDQDNSKLKKKGLSGFFSRLVLLYYLFSC" gene complement(<1307049..>1316948) /locus_tag="RR48_08485" mRNA complement(join(<1307049..1307132,1307563..1307729, 1313528..1313702,1313985..1314138,1314476..1314666, 1315044..1315175,1315631..1315741,1316925..>1316948)) /locus_tag="RR48_08485" /product="Sorting nexin-14" CDS complement(join(1307049..1307132,1307563..1307729, 1313528..1313702,1313985..1314138,1314476..1314666, 1315044..1315175,1315631..1315741,1316925..1316948)) /locus_tag="RR48_08485" /codon_start=1 /product="Sorting nexin-14" /protein_id="KPJ07472.1" /db_xref="InterPro:IPR003114" /db_xref="InterPro:IPR013996" /db_xref="UniProtKB/Swiss-Prot:Q8BHY8" /translation="MNSELKYEGCETCGSKDCSRHNPDVAPEPWSGLLIHKQLDQAIE DFYNAILDQFINTWYSKITLQPFFIDELRLQLRYASANLLKRALKIDYARLITERLVP CALRHHAVISSGAKPALHVAACNRAAEMKYLRSLTEVLLPLVLQPNETNNSVFRVLVR ELFAGWVLLSLTDVLADPYILNALIILATSDETMSELPTTPNYKVEFLETFTRQTECV YTARCRLLQLDVETVLSQQEQLYALMQHLKTTGHLQLLQFYKDISLLFGKKNLGPRID VVEQREMARAQLLRRVPATFAALNVALNNAFDIIQSPQLNKQLVYSLLDLCVLELFPE LQDKGVTATNN" assembly_gap 1308264..1312992 /estimated_length=4729 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1317185..>1317685 /locus_tag="RR48_08486" mRNA <1317185..>1317685 /locus_tag="RR48_08486" /product="Glycine cleavage system H protein, mitochondrial" CDS 1317185..1317685 /locus_tag="RR48_08486" /note="GO_component: GO:0005960 - glycine cleavage complex [Evidence IEA]; GO_process: GO:0006546 - glycine catabolic process [Evidence IEA]" /codon_start=1 /product="Glycine cleavage system H protein, mitochondrial" /protein_id="KPJ07473.1" /db_xref="InterPro:IPR002930" /db_xref="InterPro:IPR011053" /db_xref="UniProtKB/Swiss-Prot:Q9U616" /translation="MVLQRYLLSATRQYTLKRRILGSFRQTFCELRYSYSSDSTRKYT DRHEWVVVEKGIGTVGISNYAQESLGDIVFAQLPDPGSEIKAGDECGALESVKAASEI YSPVTGTITEKNSEVENKPSLINTSCFEKGWLFKLKLTKPEELDELMNEEQYEKFLKS DVEKDH" gene complement(<1320512..>1335661) /locus_tag="RR48_08487" mRNA complement(join(<1320512..1320879,1321224..1321395, 1322172..1322268,1324389..1324537,1325039..1325190, 1325981..1326114,1326855..1327051,1327697..1327813, 1327994..1328103,1328972..1329104,1329541..1329610, 1330360..1330528,1330807..1330897,1331420..1331597, 1332008..1332156,1332679..1332887,1333426..1333705, 1333814..1333874,1334044..1334211,1335396..>1335661)) /locus_tag="RR48_08487" /product="Lysosomal alpha-glucosidase" CDS complement(join(1320512..1320879,1321224..1321395, 1322172..1322268,1324389..1324537,1325039..1325190, 1325981..1326114,1326855..1327051,1327697..1327813, 1327994..1328103,1328972..1329104,1329541..1329610, 1330360..1330528,1330807..1330897,1331420..1331597, 1332008..1332156,1332679..1332887,1333426..1333705, 1333814..1333874,1334044..1334211,1335396..1335661)) /locus_tag="RR48_08487" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_function: GO:0030246 - carbohydrate binding [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="Lysosomal alpha-glucosidase" /protein_id="KPJ07474.1" /db_xref="InterPro:IPR000322" /db_xref="InterPro:IPR000519" /db_xref="InterPro:IPR011013" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/Swiss-Prot:P10253" /translation="MPKPNKNEKSRELDDDYEVVSFEEFCDKPSNAKTDLLSLNDNIN YRIYYESLKLPKDGSSSNIEEAFDREIEGQKETSLNGPKGGVYTKYQRFSQRRTTLQR AWEQLKNICPGMLGVGLMCVLCVAVWLVVGGTLGGAWTEDKYRKLWQRVHPENTERPM TYYEMVVPEVHYHDHNNLSTKNKFNGSEGSRKTPLDDEKYQRLMRPKPIQVPTEAPET AKYLKRTPEMLRNMCSNVTDNMRFDCYPQTGANEEACLKRGCCWKSTSIQGAPYCFYP PNYDTYKFYNMTENKRGVTAYYALNRPSGYPGDFRMVRVDIMFVTGDIINAKISDAEN PRFEAQYPEIPMVYGSIKTMKYKMVLESSSIGFKVVRLSDNVTVFNTQNIGGLILSDK FLQISSLLPTNQIYGLGERRARFRTVLNEWKTFTMFNSDQAPVENTNLYGTQPFYLAL EPDGKAHGTLLLNSHAIDVVLQPTPAITYRTIGGLFNFYMFLGPSPGDVVSQLTEIIG KPFMPPYWALGFHLCKYNYGSLQVTRDVWKSNRDAGIPLDVQWNDLDYMKNGNDFTYD DVKFKGLPEFVKELHEAGMHYMVLFDPGVSAAEKAGTYPPFDKGLEMNVFIKNSTGQP FVGKVWNKVSTVWPDFTHPNATMYWTQMMSNFHKKIPYDGAWIDMNEPSNFVSGSLYG ECAPEELPYTPHYLTNGLKHKTLCMDAHHYAGDHYNWHNLYGLTEAIATHFALVEIRG SRPFIISRASFPGLGRYAGHWSGDVDSSWHDLRMSIPELLSFSLFGIPMMGADICGFR GNTTVELCKRWMQLGAFYPFSRNHNSDSSIPQDPVSLGAEVVSSSRTALRMRYSLLPY YYTLFWRAHLHGELVARPLYFEAYFPAGYWYSLDGTLLTSGWRNVTEQHMLAVKNDTM MCDIRVVASCLYKSRQRAWCQRVSVARALYMCWPHLTAAQARAILYWDDGLGLQTYDE SKYSLVHFILDKQEFRSELQWWAYGMPTVNKITIFGQKVPIKNVTINQKPCKKPNCEF SYSSNSKIFVIFNINLRLNEPIHIQWMLQEKLKLTELYLIKALTIYIYNNHHQLTIHL H" gene <1336677..>1343391 /locus_tag="RR48_08488" mRNA join(<1336677..1337115,1337193..1337515,1338287..1338346, 1343302..>1343391) /locus_tag="RR48_08488" /product="Mitochondrial cardiolipin hydrolase" CDS join(1336677..1337115,1337193..1337515,1338287..1338346, 1343302..1343391) /locus_tag="RR48_08488" /codon_start=1 /product="Mitochondrial cardiolipin hydrolase" /protein_id="KPJ07475.1" /db_xref="UniProtKB/Swiss-Prot:A8IW99" /translation="MLLASAAAVVVVSQVAKKICKYIFNSSKHTENEVANDDTCSEVI QIKNREINDVILFSDDIVRHTIRIPPNKEITICESRELNCFKLIKYIKSARETLDVCM YLITSTEITEQIIRLGQKHVLVRIVVDSDMAYAPPSQIKRLEEYSFIQVQTNKRSILM HHKFCIVDGPKAIKRKLLLRAHAEKLNVHGHLTRKITNQFPKIKNTKGFVMSGSLNWS TQAMVSNHESVIVTSHPNIVSKFEKEFESLWVENEPTKFAMHALTWIRALKDEVLVVK ENIVMHTFANKFKDMCEVNQSALGQRG" gene <1428625..>1437074 /locus_tag="RR48_08489" mRNA join(<1428625..1428742,1436929..>1437074) /locus_tag="RR48_08489" /product="hypothetical protein" CDS join(1428625..1428742,1436929..1437074) /locus_tag="RR48_08489" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07476.1" /translation="MIGRLVVARSIRQASIAANKCIVHATLMHRTRPAAAAGVDTMHN AAIEESSSQSAALSVLLFKVYLSYRSPRNFWNSKEGAVKIDHG" gene <1504776..>1506261 /locus_tag="RR48_08490" mRNA join(<1504776..1504847,1506187..>1506261) /locus_tag="RR48_08490" /product="hypothetical protein" CDS join(1504776..1504847,1506187..1506261) /locus_tag="RR48_08490" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07477.1" /translation="MNFGLWRFCEKQAPKFQHCLNYCRTVCVGPIARIVLVIRGSVIS KTSS" gene <1506319..>1514551 /locus_tag="RR48_08491" mRNA join(<1506319..1506865,1514019..>1514551) /locus_tag="RR48_08491" /product="Myc protein" CDS join(1506319..1506865,1514019..1514551) /locus_tag="RR48_08491" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Myc protein" /protein_id="KPJ07478.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR002418" /db_xref="InterPro:IPR011598" /db_xref="UniProtKB/Swiss-Prot:Q9W4S7" /translation="MSPPILDPNILQFDIWETLDEVTMEMASTSEFWTQVDYEVDRLD FVPPSNPDSLDDSDPDWRIPDSPEDHKDNIVHHDCMWAGSCVDSAVHPSNTFVPTDLI SATPGQSLLRRDISPPRPETPPSLDGDEQQYPFEHVVDVASAARRLVRDSAAVAADHS YTIARQRIDYLGVQTPSDSCESEEEIDVVSLGTTHQPLPGTTQSRDSYSRSSSSQDLL YSPQQTPRPAARKRLIPPTSIPSASVPRRKARGPGRRGRRSNTDTDSEAEAPDIERRS IHNDMERQRRIGLKNLFDELKKQIPATRDKERAPKVVILREAAALCRKLREDDYEREN LQKQQNKLVAKLRKLRMMVSRYRVY" assembly_gap 1519976..1521315 /estimated_length=1340 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1582519..>1590206 /locus_tag="RR48_08492" mRNA join(<1582519..1582689,1583303..1583554,1587762..1587835, 1590116..>1590206) /locus_tag="RR48_08492" /product="tRNA dimethylallyltransferase" CDS join(1582519..1582689,1583303..1583554,1587762..1587835, 1590116..1590206) /locus_tag="RR48_08492" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]" /codon_start=1 /product="tRNA dimethylallyltransferase" /protein_id="KPJ07479.1" /db_xref="InterPro:IPR002627" /db_xref="UniProtKB/Swiss-Prot:B7GIA2" /translation="MLIKSTPCFVQVYKGLDIVTAKASRQERELVPHHLLDLLEPHQM FTVVDFRNRALKIIQNLTEKGKIPIIVGGTNYYIESIVYQILVEDMNDSNALLWEISK RKRDYVQNDESKPKKLAGDCKSDVNKEKLDCSDVHEVEDVVLGQTMVRWITHHVARDV MPAIRKSAKMLHTTCVVSRVRAPPPAPASIHSTHS" gene <1624518..>1661468 /locus_tag="RR48_08493" mRNA join(<1624518..1624552,1638610..1638733,1653570..1653685, 1659351..1659561,1661145..>1661468) /locus_tag="RR48_08493" /product="tRNA dimethylallyltransferase, mitochondrial" CDS join(1624518..1624552,1638610..1638733,1653570..1653685, 1659351..1659561,1661145..1661468) /locus_tag="RR48_08493" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]" /codon_start=1 /product="tRNA dimethylallyltransferase, mitochondrial" /protein_id="KPJ07480.1" /db_xref="InterPro:IPR002627" /db_xref="UniProtKB/Swiss-Prot:Q80UN9" /translation="MNQKMSDPRSAMSIELWLKTGRRHSEVLDEQKMSEGQLRRPDAT IVLWLKCEQTIHDERLNARVDSMLKEGLIQELLNFHDRHNKQRIKDGKPPDYTKGVFQ TLGLKEFHEYLMMTEDDRNSEDGKKLMLQSIENMKIATRRYARRQNKMVKGRFLEIPR REVPTIYELDTTDLSQWDKQVKNKAIDIIESYINKIPCPYEPLKKNIDEEKNKINSQS SNYCDVCERLIIGDKEYAIHLNSFKHQRVLKKKKKLLDQKAKEIQNISQDS" assembly_gap 1646339..1646810 /estimated_length=472 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1661577..>1662602) /locus_tag="RR48_08494" mRNA complement(<1661577..>1662602) /locus_tag="RR48_08494" /product="Dimethyladenosine transferase 1, mitochondrial" CDS complement(1661577..1662602) /locus_tag="RR48_08494" /note="GO_function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]; GO_function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO_process: GO:0000154 - rRNA modification [Evidence IEA]" /codon_start=1 /product="Dimethyladenosine transferase 1, mitochondrial" /protein_id="KPJ07481.1" /db_xref="InterPro:IPR001737" /db_xref="InterPro:IPR020598" /db_xref="UniProtKB/Swiss-Prot:Q28HM1" /translation="MSVAHRALQIRLPPLPSIKDVIRLYKLRALRELSQNFLLEPRLI DKIVRAAGNIQNNIVCEVGPGPGGITRSIIQQAPRKVILVEKDPRFLPTLELLGDACK DKVDIDIITGDILHTDVAHFIPPDVKVGWNDPPPPVNLIGNLPFSVSTILIIRWLEAI SRQEGAWSFGRVRMTLTFQKEVAERMSAPILHKQRCRLSVMCQNWCNVKYKFDIPGSA FLPKPEVDVGVVTLTPLKQPIIKLPFKLVEKVVRQIFSMRQKYSIRGAQTLFPEEIRE EMALKMYNIADLDPVTRPYQITNSEFGRLCEAYKAIITEHPDLEKYDYRAPKKKVITE NLDEEIM" gene complement(<1662602..>1662868) /locus_tag="RR48_08495" mRNA complement(<1662602..>1662868) /locus_tag="RR48_08495" /product="hypothetical protein" CDS complement(1662602..1662868) /locus_tag="RR48_08495" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07482.1" /db_xref="InterPro:IPR018628" /translation="MGDSNLKPKINSTDGKTPVLKQAELDYMKIIEQKNLERVQKLQQ ITKRNRITGCLIGAGVLGIYLYSINAVKQETFLDDFEEPVKVQQ" gene <1663582..>1679711 /locus_tag="RR48_08496" mRNA join(<1663582..1663682,1663829..1663879,1677352..1677445, 1677595..1677784,1678006..1678187,1678340..1678432, 1678705..1678865,1679220..1679328,1679616..>1679711) /locus_tag="RR48_08496" /product="F-box only protein 25" CDS join(1663582..1663682,1663829..1663879,1677352..1677445, 1677595..1677784,1678006..1678187,1678340..1678432, 1678705..1678865,1679220..1679328,1679616..1679711) /locus_tag="RR48_08496" /codon_start=1 /product="F-box only protein 25" /protein_id="KPJ07483.1" /db_xref="InterPro:IPR022364" /db_xref="UniProtKB/Swiss-Prot:Q4R372" /translation="MPFISKDWRSPGEEWVKTEEGWEKKKVLECTAPRYAAISNFNNM EEKQQKWMQEGEEGDKSTSDTVARIPPHCHITIKCTREIAGFNGLSEAVRRLDFSSAV RDVRRFNYICALLELLLGGQRLTHLPGAAQKLLLSMLEQLADHVATSKHNPEALRALA AALGGAREAERRACWGRPLGSRALWRHHDRAIARITRIAQDIRIPEPGPEVMPKLHDL PEECIREIMLRISDHRDLDAASSAWSVMASLCSERRVWRELVLFHFTQQQLSTVLAKD ETEVDWKKTFHQLRKLYGLREEAQFAETLSLCRHCKCLFWRSLGHPCIADQCPEYRER LKEAGGPLPPHPVPPAAFLKFFSL" assembly_gap 1666387..1667898 /estimated_length=1512 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1681878..>1682117) /locus_tag="RR48_08497" mRNA complement(<1681878..>1682117) /locus_tag="RR48_08497" /product="hypothetical protein" CDS complement(1681878..1682117) /locus_tag="RR48_08497" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07484.1" /db_xref="InterPro:IPR017920" /translation="MSTSQSDANALPRITDVEWKLEALTNTPGVGSDKLLYSVVLKTD KDDVPFTCDTQQLQDLVYKLKDLVRHCENVKSELT" gene complement(<1682153..>1688472) /locus_tag="RR48_08498" mRNA complement(join(<1682153..1682170,1684692..1684811, 1685153..1685298,1686046..1686215,1686464..1686648, 1687400..1687565,1688384..>1688472)) /locus_tag="RR48_08498" /product="Integrin-linked protein kinase" CDS complement(join(1682153..1682170,1684692..1684811, 1685153..1685298,1686046..1686215,1686464..1686648, 1687400..1687565,1688384..1688472)) /locus_tag="RR48_08498" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Integrin-linked protein kinase" /protein_id="KPJ07485.1" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020683" /db_xref="UniProtKB/Swiss-Prot:Q13418" /translation="MEDIFQWCREGNALQVRVWLDDTEHDMNQGDDHGFSPLHWACKE GHMKIVEMLIRRGARINVTNMGDDTPLHLAAAHGHRPIVQLLLQNRVDVNFTNEHGNS PLHYACFWGYSAIAEDLVLAGALVSLANKDGDTPLDKTRGQLVQRLHELAVQHGQDLK KIQFKDQSWLGLKTRSRDATLSRHKGININELALHTRIAVTPSGETWRGRWQKNDIVA KIIAVRECTPRVQRDFNEEFPKLRIFSHPNILPVVGCCVSPPSLVVISQHMSWGSLYS LLHGGGGGGGGRGGVVAAVTD" assembly_gap 1682345..1684684 /estimated_length=2340 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1689251..>1690415) /locus_tag="RR48_08499" mRNA complement(join(<1689251..1689410,1689549..1689745, 1689903..1690141,1690412..>1690415)) /locus_tag="RR48_08499" /product="U2 small nuclear ribonucleoprotein B''" CDS complement(join(1689251..1689410,1689549..1689745, 1689903..1690141,1690412..1690415)) /locus_tag="RR48_08499" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="U2 small nuclear ribonucleoprotein B''" /protein_id="KPJ07486.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q9CQI7" /translation="MTMDIRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDIVA MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRPKLPRSTEDGKKKKNKDASR GVIPGFGQPNMLNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR HDIAFVEFSNEMQSAAAKEALQGFKITPTHAMKITFAKK" gene <1692281..>1698008 /locus_tag="RR48_08500" mRNA join(<1692281..1692385,1692469..1692651,1692986..1693348, 1693699..1693945,1694171..1694288,1694746..1694925, 1695663..1695906,1696853..1697017,1697799..>1698008) /locus_tag="RR48_08500" /product="Mini-chromosome maintenance complex-binding protein" CDS join(1692281..1692385,1692469..1692651,1692986..1693348, 1693699..1693945,1694171..1694288,1694746..1694925, 1695663..1695906,1696853..1697017,1697799..1698008) /locus_tag="RR48_08500" /codon_start=1 /product="Mini-chromosome maintenance complex-binding protein" /protein_id="KPJ07487.1" /db_xref="InterPro:IPR019140" /db_xref="UniProtKB/Swiss-Prot:Q28DV7" /translation="MHDFSYDFDSVTPDLWMANEENWKNKLSKLDNWYQIPLLNSNAS HNLSDGRLVRFRGMVQDMHNPEFYFEKFEVYNTATNEVKVKSGKYCDTAHILENEKIN YTENLKSAQRQAMVVISLPGLSDWAQEIEDSRNHLTYLNDQPNTTKRLGLTNIKFKRS YDEAEDDPEDMEVVDNVCGNKELKTSEKVDDGNKVVSREHLLNFPLPDVPSKSCIVKI YDESENLKLNDMIEVIGFLSVDPSLSGEFQQENNSFLEPESETDAETITHNPPPSLVP RLHAVVVKKLDHCNPLLTETFDQAKVLQEASSAREHLLKALTELLLGDELAAEYLICH LIASVYLRQDTLALGQFCLNLSNLPTKKYPNYAKQLYDIIKQFVTKCYYLPLTIDNLN TMALLPKKDYDCNRLTSGILQLSKHTHLVLDETKMEQGRLDSTGVGNITALGNMITTQ KVEYDFKYYKMEFDSDIKVLLLSEGKSLLPSDYHIPLRPEESCLEIFDAIVEAATYYL KEEIMNTIRKYLTNLKLVKYTVSEDLKFVEDDFIEMRKADSDNPFSADDLHRHLVLAR LVSLSRGYDTLTKDCWDITRKMESERLERLKNRIAPTL" gene <1698610..>1700187 /locus_tag="RR48_08501" mRNA join(<1698610..1698711,1699056..1699159,1699344..1699473, 1700137..>1700187) /locus_tag="RR48_08501" /product="Uncharacterized protein C20orf24-like" CDS join(1698610..1698711,1699056..1699159,1699344..1699473, 1700137..1700187) /locus_tag="RR48_08501" /codon_start=1 /product="Uncharacterized protein C20orf24-like" /protein_id="KPJ07488.1" /db_xref="UniProtKB/Swiss-Prot:Q9CQT9" /translation="MSTKNKTSDGASKGKVTESLWTKAFTSNTEWPDKEEFLDVIYWM RQAIGIVLGLCWGLIPLKGFIGILLFVAVNAGVVYFYVSNYQNIDEEEYGGMWEITKE GFMTAFAGFLVTWIIIYTGLHGSESL" assembly_gap 1702980..1703452 /estimated_length=473 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1703718..>1706068) /locus_tag="RR48_08502" mRNA complement(join(<1703718..1703960,1704367..1704533, 1704655..1704761,1705007..1705157,1705463..1705684, 1705954..>1706068)) /locus_tag="RR48_08502" /product="putative tRNA threonylcarbamoyladenosine biosynthesis protein osgep" CDS complement(join(1703718..1703960,1704367..1704533, 1704655..1704761,1705007..1705157,1705463..1705684, 1705954..1706068)) /locus_tag="RR48_08502" /note="GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="putative tRNA threonylcarbamoyladenosine biosynthesis protein osgep" /protein_id="KPJ07489.1" /db_xref="InterPro:IPR000905" /db_xref="InterPro:IPR017861" /db_xref="UniProtKB/Swiss-Prot:Q7SYR1" /translation="MVTAIGFEGSANKLGVGIVKDGKILANCRRTYITPPGEGFLPRE TAEHHQENIHAVMREAFAESGLSPRDIDVVCYTKGPGMGAPLLVCAIVARTCSKIWNK PIIGVNHCIGHIEMGRLITKAKNPTVLYVSGGNTQIIAYSRQRYRIFGETIDIAVGNC LDRFARVLKLSNAPSPGYNIEQAAKKGQKYLHLPYSVKGMDVSFSGILSYMEDKISEL LKEYTPEDLCYSLQETVFAMLVEITERAMAHCGSEEVLIVGGVGCNLRLQEMMGVMCS ERGAKLFASDERFCIDNGVMIAHAGALAYQSGARPEFEDSTITQRYRTDDVLVTWRDD " gene complement(<1706562..>1712622) /locus_tag="RR48_08503" mRNA complement(join(<1706562..1707480,1707546..1707715, 1708019..1708198,1708611..1708710,1708787..1708908, 1709074..1709221,1709810..1709905,1710165..1710320, 1710863..1711008,1711852..1711992,1712186..1712306, 1712453..>1712622)) /locus_tag="RR48_08503" /product="Proline-, glutamic acid- and leucine-rich protein 1" CDS complement(join(1706562..1707480,1707546..1707715, 1708019..1708198,1708611..1708710,1708787..1708908, 1709074..1709221,1709810..1709905,1710165..1710320, 1710863..1711008,1711852..1711992,1712186..1712306, 1712453..1712622)) /locus_tag="RR48_08503" /codon_start=1 /product="Proline-, glutamic acid- and leucine-rich protein 1" /protein_id="KPJ07490.1" /db_xref="UniProtKB/Swiss-Prot:Q1W1Y5" /translation="MQFSFLTAEILKKVREVDPNNSDAVKEALTSFFQNIVKYTEANC NKWLRSLEDVLSRFPRYCSTHKTTIETHLTHFINSSNYYDVIQAAKCAHALQQVSWPQ DKSVTAKSAWRDQMTLLCDAAHSLIDALFIPSVELYQSGSKKNDTQKNSSSPLTAALS KINSTATAGATNRQTLLQTRLRNIFIFIQAMIVEIYPVPKPIQPQTILNVIVRSLSVT SGKKSQVTDVVSLKIQALRTLDALNACLGANLIPFSPLVFRIVMQTFRWTSDNQTEGS RQVRSHTYKSLSNWLTTLHSHQLSGHTWEDEITTHIIDDITPVKKTVELTMTGGQPLK NLSKKARRKLQNQMLKESTISTHIPGEKNKVVEFEEIKNDIAMSALGCAEIFLSVCGV FLKPTTHKLFQEHLVRECFNASTYSDDYILALLRTLEASRKTTPSTVPPPTQYCLQLY STLSNNQCIEIARFCSQALLDIRMHLHCSPPSLNFALELPKEKDPIEKSRVVSERNVE ALKKLLGDRMPDEENIEVITIHDEPSKKRPRLDQDNISISSESVCSVEITNDAKDKEV TEELEIEGNEEELGEEVTNNDDEDVDMQAGNSIEEVDGTTKEIEDQIVDSAEKISEEV KEMETKATSIYDAKTQLETNISNDDIDEDNQTLSMEVAYDLPTAVDKVRVLDQMDDDN LPSTNDTDDVQITCGQVILTSQDNEIDKTKESDEVTLDVNKDEEAKKVNESNQTSDVI TIDDTVTSGYKAVTDDVVTNNAVTTDDVLTNGVEKTNGNINEMITQVPDSNITDKLSK PDDISVDDMMADFVDEVNDQTAEA" gene <1713206..>1716817 /locus_tag="RR48_08504" mRNA join(<1713206..1713278,1714543..1715023,1716235..1716375, 1716523..>1716817) /locus_tag="RR48_08504" /product="RAB6-interacting golgin" CDS join(1713206..1713278,1714543..1715023,1716235..1716375, 1716523..1716817) /locus_tag="RR48_08504" /codon_start=1 /product="RAB6-interacting golgin" /protein_id="KPJ07491.1" /db_xref="InterPro:IPR007033" /db_xref="UniProtKB/Swiss-Prot:Q5T7V8" /translation="MSTFTGFSEEDLKRIKSAESFKSSGSIDPDFDLSNVRKIEKIGA KPKKGIIKNISPILRKQDSDDAIDSIEFSKCKLSIKTPTTPSEHTLSNIDDKEEMIED IKKNDTDGENEESNSLSGEEIENSLDRRDSIVTPDIVRGVENYSEDELAAHRVKLQEL QLKQKLMEEQNKKRKEMLAKALADRTRQTEEEVLRLEKIKKELQVLDGQFSHDVALLR KKIDQACLSYSEAEKQYLKVEKEFLQAKINLQKEKEKKELLTEHLCALITHNETRKAQ KLETLMLELATDKKIILSETEPNPEPTIEDKKPVIVDGIDERNGKMVEITNDS" gene complement(<1718197..>1719650) /locus_tag="RR48_08505" mRNA complement(join(<1718197..1718429,1718678..1718874, 1719319..1719471,1719568..>1719650)) /locus_tag="RR48_08505" /product="hypothetical protein" CDS complement(join(1718197..1718429,1718678..1718874, 1719319..1719471,1719568..1719650)) /locus_tag="RR48_08505" /codon_start=1 /product="hypothetical protein" /protein_id="KPJ07492.1" /db_xref="InterPro:IPR018902" /translation="MLKFRYGKCYGDNTRQILREIRSKGLFNKPLEYRPRDNYELDNM PRRNSPTTDVYDSVKHRQPAYMTGYTGYVPGMNFRYGKSYGRAADDCMADFSENQREL RRKADFNKSYIRSRSAPKMETIHTRDEIRRDLNKFKEINKFKDHVISPEFPPIAGYTG HIPRIKGSEASLSQRYHCAAKRGLELIKIEREKRKELHDADVNIKAILRGENKKYSYW NWG" gene <1728554..>1733367 /locus_tag="RR48_08506" mRNA join(<1728554..1728636,1730963..1731134,1731795..1732032, 1733053..1733150,1733233..>1733367) /locus_tag="RR48_08506" /product="Drebrin-like protein" CDS join(1728554..1728636,1730963..1731134,1731795..1732032, 1733053..1733150,1733233..1733367) /locus_tag="RR48_08506" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003779 - actin binding [Evidence IEA]" /codon_start=1 /product="Drebrin-like protein" /protein_id="KPJ07493.1" /db_xref="InterPro:IPR002108" /db_xref="UniProtKB/Swiss-Prot:Q9VU84" /translation="MAINLEKHREALVAAWKDVLDEKTDTNWALFGYDGLSNDLKFVS KGDGGLTELIDDFNSGKIQYAFLKVDLPDGSISKYVLINWQGEGAPTVRKGTCANHIQ HVAQLFTGFHLTMHARTEDDLDEKVILDKLAKAGSAFNFKSSRQEEIPPSGPVGTAYR KVNPVQEINSKERDQFWLKEEQEEKKRIEAEKKRREEEKRKAEEEVRRRDELEAARRA KAEEEKCVKFLICTLVNGKKKYE" assembly_gap 1729862..1729883 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1733375..1734222 /estimated_length=848 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1734265..>1736055 /locus_tag="RR48_08507" mRNA join(<1734265..1734640,1735110..1735208,1735904..>1736055) /locus_tag="RR48_08507" /product="Drebrin-like protein" CDS join(1734265..1734640,1735110..1735208,1735904..1736055) /locus_tag="RR48_08507" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Drebrin-like protein" /protein_id="KPJ07494.1" /db_xref="InterPro:IPR001452" /db_xref="UniProtKB/Swiss-Prot:Q9VU84" /translation="MSLERPSQIQYEPIIDPLVDLSPSTDNEANSFSAINYTEYNEIY KDDVLKQSEPMIKQNILENDMFDASYSSSNENDDDDSDNKFSTIKRSPYTKDAEARSE LSRQNTVIENVHYKKENGTTTLDDVSPEGLEEEGNIYEDLDDDPGLTARALYDYQAAD ESEITFDPGDIITHIEQIDAGWWQGLGPRGVFGLFPANYVELLPCHPR" gene complement(<1738646..>1746677) /locus_tag="RR48_08508" mRNA complement(join(<1738646..1738720,1740367..1740550, 1741577..1741851,1742127..1742284,1742791..1745408, 1745701..1745818,1746449..>1746677)) /locus_tag="RR48_08508" /product="Halomucin" CDS complement(join(1738646..1738720,1740367..1740550, 1741577..1741851,1742127..1742284,1742791..1745408, 1745701..1745818,1746449..1746677)) /locus_tag="RR48_08508" /codon_start=1 /product="Halomucin" /protein_id="KPJ07495.1" /db_xref="UniProtKB/Swiss-Prot:Q18DN4" /translation="MHRSKIPSPARSEGAKVTPRRHRFRSSRSVSSPARSDVSVKLSS IVQMHAMQSPLLSPLKTRRSVLSDNTDIEVPGRQSWWKRLEENSRDVMEVFESKTTEQ MENIDEYIETDFKSQENNYTLDLPESSDGESINSIVLPQRKFFSQKQTQSNKLFNKII ENRENLTHRKSKANTDNTIFVGKKNFFNKDTEVRRSRPAFPPGLLNMTDKTLINKTHD ITKHEQVRNLLGNRAGTKRKNMFADFIMSESEDEIPDIQPNVFGFAKSKQPQRKMSLQ GTRNTSPRSNETDLEFDDWQHLPSSTMVDNEFGNTESSPLKRPRLSKPDSVIEEVRGN VRNKLDKTKLTLIMSHGLEDDNELEESDKKRDPKNTHEKTLTQIPETDTARPFIAEII EVESDDEHNFTLRYDNDDKNMQDDEMDVTVKELEKDNSNSNKNNINTTTDKELKSPRS LKDNKPNANKSVIIEEQEQDKNISWKVLKTHKEQHAAIITREDLVEKDVNKTMNTSIS ASNNKDACDEIDNPEINIERGNSSINKEKTNSETEVIKHTSNDIPQKNAAIIERIQKD DVMQEEKSKNREDKFNQVEAQQEKNNSIENINEEIQKSVDENMEVDGNINNFGRDLNK VTEQENHNVNNKKDTESHKVTTQIHINDETDKDNHHVAHPKLNEGKEETVKETPISTM QEKTNTRFEENPGAVEELQEENDNLNENTEMNKVVNESNKETRKVAMPSVDANINQAD EGKGDDNNENSEVDEEHNLEHSETTNKSLNSVKQASSNENILTDDEDSKHNDVENITE DNETTNKSHEESNKMTSVDENNITDDEDNEEENQVDDEDNAEVSEEQNETNDETDKQA GVSSMDANIESDDDENPEDSDEEDNNENDAEENEITEENDEEMDSELEISSINKSIEM ENEEIGANNEEDNAEENEVENESDEGISDRIGMPSMNIETDDEDNNQNNEEMNIEQEI NNDSNAKTDNQVTFSKGRIYLTNVTGESTHSYAEEAADSDPEDAQTRQLALEQYLMKI KNDNIEKRRKMLEEVRNSLKTRSREPFNNFKAPARLRPRKPQQHSDVPQQTKTNKKTS LNIENLPPELLDDMKYKPPRRYQPKSAAWITKKLYKYLETKLEPKYDYKARVKAEKIT EALYEFSKEIRRQRVASPHTVDVIKLQLARAGLVTIALRLLHVHTRVQLIVWGRSRLL ESPSSISETEFNLE" gene complement(<1754856..>1762150) /locus_tag="RR48_08509" mRNA complement(join(<1754856..1755065,1755386..1755535, 1758797..1758901,1759118..1759243,1759986..1760068, 1760408..1760628,1760880..1760966,1761620..1761761, 1761866..1761947,1762100..>1762150)) /locus_tag="RR48_08509" /product="Peptide transporter family 1" CDS complement(join(1754856..1755065,1755386..1755535, 1758797..1758901,1759118..1759243,1759986..1760068, 1760408..1760628,1760880..1760966,1761620..1761761, 1761866..1761947,1762100..1762150)) /locus_tag="RR48_08509" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006857 - oligopeptide transport [Evidence IEA]" /codon_start=1 /product="Peptide transporter family 1" /protein_id="KPJ07496.1" /db_xref="InterPro:IPR000109" /db_xref="InterPro:IPR016196" /db_xref="UniProtKB/Swiss-Prot:P91679" /translation="MCDRMSEMENNRKQYNKSNDHFPKIILLILAAEFCERMSYSGMR VFLTLYLRNKLDYTDDEAKEIYHMFNGMVSLCPIFGGIVADNYLGKYRTILYMMFIYV MGNSLVAVTAIPQLMFPGRPCVTAFGGEQFALPEQERLLTLYFSILYFNLCVGSLIAK TLAPIFRGDVHCFGDKDCYPLAFGAPVIVIIISIVLFVSGRRRYIIKEPKGNIVVDFT KCIFGSSWALQASRMDGRLGSYTIKPDQLIVLSPISVMSFIALTQKYLYPCLAKWNLL TNPLNKLKVGGIMAALAFVATASVMYAVTGSELAFREAPENMKAVVGSIWILMQAFGN ILIIIFTRLLVNVQMQTQFIMYASLMFLSMVIFHYQSRNYKFAENVKDEELQEMKGHS KYNTKKLKYKSNDSNSEEISFELIKD" assembly_gap 1757460..1757624 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1778372..>1779694 /locus_tag="RR48_08510" mRNA <1778372..>1779694 /locus_tag="RR48_08510" /product="Neuropeptide Y receptor type 2" CDS 1778372..1779694 /locus_tag="RR48_08510" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004983 - neuropeptide Y receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Neuropeptide Y receptor type 2" /protein_id="KPJ07497.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000611" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:P79113" /translation="MNDRLLSFTTENNTQLNNVTSRNITSALETNGYENIIDNKLIQG IFCVIYTIIFVLGLLGNLLVCFVVIRNKAMQTVTNLFITNLALSDILLCLFAVPFTPL YSFRGSWNWGSLLCHVMPFAQGCSVYISTLTLMSIAIDRFFVIIYPFRPRMKVETCIT VIIMIWTFAITVTMPYAIYMTYYDLDIGRFCEETWPTEKLRRVFGSVTSILQFVLPFI VIAFCYTCVSFKLNDRAKAKAVSKNTRKEEFDKNRKRRTNQMLIAMVTIFGLSWLPLN VINLCNDYYIYAIHLKYYFLIFFIGHVIAMSSTCYNPFIYAWMNENFRKEFKQLIPCI DTSVQFRGNIQMEQLGVGPSEKTFNGNTTTDSYLSSSTRPASFRHKRKPSAAADVEKS GVELNEDLLTVDVKHCHISTSYNLRRESVKLRLINEESFDGSPTQSQF" assembly_gap 1796932..1799938 /estimated_length=3007 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1826547..>1827947) /locus_tag="RR48_08511" mRNA complement(<1826547..>1827947) /locus_tag="RR48_08511" /product="Neuropeptide Y receptor type 2" CDS complement(1826547..1827947) /locus_tag="RR48_08511" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004983 - neuropeptide Y receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Neuropeptide Y receptor type 2" /protein_id="KPJ07498.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000611" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q5IS62" /translation="MLFTDNDIFNDAVSLSADQYDAIAAMNFNGTLASYLGGRVLILK TFSGESVEVIDEPKSNKTIDIIDVKFVQVAFCILYTVIFVLGVFGNVLVCYVVFRNRA MQTVTNLFITNLALSDILLCVFAVPLTPMYTFIGQWVFGRLLCHLMPYAQGTSVYISS LTLTSIAIDRFFVIIYPFHPRMKLNTCIYIIVFIWLFSLIVTCPYGLFMGIQIIYNKT YCEESWPSDKSRKIFGVFTTVLQFLIPFLVIAVCYTCVSIRLNDRARSKPGAKNTRRE EADRDRKRRTNKMLISMVAIFGISWLPLNIINIFNDFCAQMNEWNYYFLSFFLAHSMA MASTCYNPFLYAWLNENFRKEFKQVLPFFESTGGVRNSYHSGRMPTNKSDRVCNGNET IQETLLGSSFNRGPSFKQKVLEGNGKKDNGVEIENIILEDKTVSASFNSRSENVNLQL IDEESRFTELNTKQEI" gene complement(<1861453..>1885483) /locus_tag="RR48_08512" mRNA complement(join(<1861453..1861815,1862156..1862389, 1862693..1862893,1863398..1863598,1863897..1864037, 1864392..1864453,1880215..1880308,1885451..>1885483)) /locus_tag="RR48_08512" /product="Farnesyl pyrophosphate synthase" CDS complement(join(1861453..1861815,1862156..1862389, 1862693..1862893,1863398..1863598,1863897..1864037, 1864392..1864453,1880215..1880308,1885451..1885483)) /locus_tag="RR48_08512" /note="GO_process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]" /codon_start=1 /product="Farnesyl pyrophosphate synthase" /protein_id="KPJ07499.1" /db_xref="InterPro:IPR000092" /db_xref="InterPro:IPR008949" /db_xref="UniProtKB/Swiss-Prot:Q8WMY2" /translation="MTLIYTWSNDFLELAFEVQGSSLQFQLQNPRKYRWDRQRKIRET TLVEKKYADIKLLKERVINIAEHEALAREPIHGNLTMFAFDALAHSTDLNEKKLHQIQ VLAWGVELLQTYYNIGDDIEDNAKTRSGKPCWHQLPGVGLMAINDADLIRSFIYEMVK NNIEEPIACTVQNYLNELQTYYNIGDDIEDNAKTRSGKPCWHQLPGVGLMAINDADLI RSFIYEMVKNNIEEPIAYTVQNYLNETYFALNIGQLMDISLTRSNDFDQFTMEYYNLL NYFKSAFYTVKLPILLALSICNLHSKEAYMHVDKVCSDLGILLQMQNDIMDYVDSKSA SLKTSSDIQNRKCSWPAVAFLENCNISQRKEFESCYGQSEPEKVERVRRLYKEIDILK IYRQHEQKRYDSMMEQIKQLPVDSIPSKEFFVKILNVLQNYTEDISPSKS" CONTIG join(LADJ01068411.1:1..13214,gap(5329),LADJ01068412.1:1..27934, gap(4561),LADJ01068413.1:1..7641,gap(177),LADJ01068414.1:1..59864, gap(866),LADJ01068415.1:1..16930,gap(23),LADJ01068416.1:1..7477, gap(1954),LADJ01068417.1:1..55344,gap(212),LADJ01068418.1:1..14748, gap(97),LADJ01068419.1:1..187691,gap(338),LADJ01068420.1:1..178156, gap(43),LADJ01068421.1:1..181617,gap(307),LADJ01068422.1:1..115202, gap(33),LADJ01068423.1:1..6764,gap(1733),LADJ01068424.1:1..11097, gap(167),LADJ01068425.1:1..7425,gap(1233),LADJ01068426.1:1..77372, gap(147),LADJ01068427.1:1..15635,gap(450),LADJ01068428.1:1..33502, gap(244),LADJ01068429.1:1..10331,gap(397),LADJ01068430.1:1..6531, gap(45),LADJ01068431.1:1..16040,gap(978),LADJ01068432.1:1..3613, gap(3094),LADJ01068433.1:1..19141,gap(145),LADJ01068434.1:1..78297, gap(128),LADJ01068435.1:1..133996,gap(4729), LADJ01068436.1:1..206983,gap(1340),LADJ01068437.1:1..125023, gap(472),LADJ01068438.1:1..19576,gap(1512),LADJ01068439.1:1..14446, gap(2340),LADJ01068440.1:1..18295,gap(473),LADJ01068441.1:1..26409, gap(22),LADJ01068442.1:1..3491,gap(848),LADJ01068443.1:1..23237, gap(165),LADJ01068444.1:1..39307,gap(3007),LADJ01068445.1:1..85986) //