LOCUS       KM455910                2280 bp    cRNA    linear   VRL 05-OCT-2014
DEFINITION  Influenza A virus (A/chicken/Durango/1433-8/2005(H5N2)) segment 1
            polymerase PB2 (PB2) gene, complete cds.
ACCESSION   KM455910
VERSION     KM455910.1
KEYWORDS    .
SOURCE      Influenza A virus (A/chicken/Durango/1433-8/2005(H5N2))
  ORGANISM  Influenza A virus (A/chicken/Durango/1433-8/2005(H5N2))
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Insthoviricetes; Articulavirales;
            Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus
            influenzae.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Solis Hernandez,M., deJesAos Huerta,B., Paz,P., Braulio DelGadillo
            Alvarez,J., Pedersen,J.C., Suarez,D.L. and Killian,M.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-SEP-2014) Diagnostic Virology Laboratory, National
            Veterinary Services Laboratories (NVSL), USDA, 1920 Dayton Avenue,
            Ames, IA 50010, USA
COMMENT     GenBank Accession Numbers KM455910-KM455917 represent sequences
            from the 8 segments of Influenza A virus
            (A/chicken/Durango/1433-8/2005(H5N2)).
            
            ##Assembly-Data-START##
            Assembly Method       :: SeqMan NGen v. 4.0
            Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Influenza A virus
                     (A/chicken/Durango/1433-8/2005(H5N2))"
                     /mol_type="viral cRNA"
                     /strain="A/chicken/Durango/1433-8/2005"
                     /serotype="H5N2"
                     /host="chicken"
                     /db_xref="taxon:1541678"
                     /segment="1"
                     /geo_loc_name="Mexico"
                     /collection_date="2005"
     gene            1..2280
                     /gene="PB2"
     CDS             1..2280
                     /gene="PB2"
                     /codon_start=1
                     /product="polymerase PB2"
                     /protein_id="AIR94059.1"
                     /translation="MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPA
                     LRMKWMMAMKYPITADKKIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRN
                     GPTTNTVHYPKVYRTYFEKIERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQ
                     DVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFL
                     PVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADP
                     LASLLEMCHSTKIGGLRMVDILRQNPTEEQAVGICKAAMGLRISSSFSFGGFTFKRTS
                     GSSVKKEEEVLTGNLQTLKIGVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQ
                     SIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKNAKVLFQNWG
                     IESIDNVMGMVGILPDMTPSTEMSLRGIRVSKMGVDEYSSTEKVVVSIDRFLRVRDQR
                     GNVLLSPEEVSEAQGTEKLTITYSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQ
                     DPTMLYNKMEFEPFQSLVPKAARSQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAA
                     PPEQSRMQFSSLTVNVRGSGVRILVRGNSPVFNYNKTTKRLTILGKDAGALTEDSEEG
                     TAGVESAVLRGFLILGKEDKRYGPALSISELSNLVKGEKANVLIGQGDVVLVMKRKRD
                     SSILTDSQTATKRIRMAIN"
BASE COUNT          777 a          436 c          575 g          492 t
ORIGIN      
        1 atggagagaa taaaagagct aagagatcta atgtcacagt cccgcacccg cgagatactc
       61 accaagacca ctgtggacca tatggccata atcaaaaaat acacatcagg aagacaagag
      121 aagaaccctg cactcagaat gaaatggatg atggcaatga aatatccaat cacagcagac
      181 aagaaaataa tggaaatgat tcctgaaaga aatgaacagg gacaaaccct ctggagcaaa
      241 acaaatgatg ccggctcaga ccgagtgatg gtatcgcctc tggccgtaac atggtggaat
      301 agaaatggtc cgacaacaaa cacagttcac tacccgaagg tataccgaac ttatttcgaa
      361 aaaattgaga ggttaaagca tgggaccttt ggccccgtcc acttcagaaa tcaggttaag
      421 ataagaagga gagttgacat aaaccctggc cacgcagatc tcagtgccaa agaggcgcag
      481 gatgtaatca tggaagttgt cttcccaaat gaagtgggag ctagaatact cacatcggag
      541 tcacagctga caataacaaa agagaagaaa gaagagcttc aagattgcaa aatcgcccct
      601 ttgatggtag catatatgct agaaagagaa ctagtccgca aaacaagatt cctcccagtt
      661 gctggtggga caagcagtgt ctatattgag gtgttgcact taacccaggg aacgtgctgg
      721 gaacagatgt acactcctgg aggagaggtg aggaatgatg atgtcgacca gagtctgatt
      781 atcgctgcca ggaatatagt aagaagagca acagtatcgg ctgacccatt agcatctcta
      841 ttggaaatgt gtcacagcac aaagattgga ggactaagga tggtggacat ccttaggcag
      901 aatccaacag aggaacaagc tgtggggata tgcaaggcag caatgggact aaggattagc
      961 tcatctttca gcttcggcgg attcactttc aaaaggacaa gtggatcgtc agtaaagaaa
     1021 gaagaagaag tgctcacggg caaccttcaa acactgaaaa taggagtaca tgagggatat
     1081 gaagaattca caatggttgg cagaagagca acagctattc tcagaaaagc aaccagaaga
     1141 ttgattcagc taatagtaag tggcagagat gaacagtcaa ttgctgaggc aataatcgtg
     1201 gccatggtat tttcacaaga ggattgcatg atcaaagcag tccgaggcga tttaaacttt
     1261 gtcaacaggg caaatcagcg actgaatcct atgcatcaac tcttgagaca cttccaaaag
     1321 aatgctaagg ttctttttca gaactgggga attgaatcca ttgacaatgt gatgggaatg
     1381 gtcggaatat tacctgacat gaccccaagt acggagatgt cactgagggg gataagagtt
     1441 agcaaaatgg gagtagatga atactccagc acggagaaag tggtggtgag cattgaccga
     1501 tttttaaggg tcagggacca acggggaaat gtattactgt ctcccgaaga agtcagcgaa
     1561 gcacaaggaa cagagaagtt aacaataact tactcatcat caatgatgtg ggagatcaac
     1621 ggccctgagt cggtgctggt caatacttat cagtggatca ttagaaactg ggaaacagta
     1681 aaaattcaat ggtcacaaga tcccacaatg ttatacaaca agatggaatt cgaaccattt
     1741 cagtctcttg ttcctaaagc agccagaagt caatacagcg gattcgtgag gacactgttc
     1801 caacagatgc gagatgtgct tggaacattt gacactgttc aaataataaa acttctccct
     1861 tttgctgctg ctccacccga gcagagtagg atgcaatttt cctcactgac tgtaaatgtg
     1921 agaggatcag gagtgaggat actggtaaga ggcaattctc cagtgttcaa ctacaacaaa
     1981 acaaccaaga ggcttaccat cctaggaaag gatgctggtg cattgaccga agattctgag
     2041 gaagggacag ctggagtgga gtctgctgtt ttaagggggt ttctcatttt gggaaaagaa
     2101 gacaagagat atggcccagc attaagcatc agtgaattga gcaatcttgt taaaggagag
     2161 aaggctaatg tactaattgg acagggagac gtggtgttgg taatgaaacg gaaacgggac
     2221 tctagcatac ttactgacag ccagacagcg accaaaagga ttcggatggc catcaattag
//