LOCUS       KM190998                 702 bp    DNA     linear   VRL 21-SEP-2015
DEFINITION  Porcine circovirus-2 isolate 2012434-1 capsid gene, complete cds.
ACCESSION   KM190998
VERSION     KM190998.1
KEYWORDS    .
SOURCE      Porcine circovirus 2
  ORGANISM  Porcine circovirus 2
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus
            porcine2.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Xiao,C.T., Halbur,P.G. and Opriessnig,T.
  TITLE     Global molecular genetic analysis of porcine circovirus type 2
            (PCV2) sequences confirms the presence of four main PCV2 genotypes
            and reveals a rapid increase of PCV2d
  JOURNAL   J. Gen. Virol. 96 (7), 1830-1841 (2015)
   PUBMED   25711965
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Xiao,C.T. and Opriessnig,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-2014) College of Veterinary Medicine, Department
            of Veterinary Diagnostic and Production Animal Medicine, Iowa State
            University, Ames, IA 50010, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Porcine circovirus 2"
                     /mol_type="genomic DNA"
                     /isolate="2012434-1"
                     /host="pig"
                     /db_xref="taxon:85708"
                     /geo_loc_name="USA"
                     /collection_date="2012"
     CDS             1..702
                     /note="ORF2"
                     /codon_start=1
                     /product="capsid"
                     /protein_id="AIT11664.1"
                     /translation="MTYPRRRYRRRRHRPRSHLGQILRRRPWLVHPRHRYRWRRKNGI
                     FNTRLSRTFGYTVKATTVRTPSWAVDMMRFNLDDFVPPGGGTNKISIPFEYYRIRKVK
                     VEFWPCSPITQGDRGVGSTAVILDDNFVPKVNAQTYDPYVNYSSRHTIPQPFSYHSRY
                     FTPKPVLDSTIDYFQPNNKRNQLWLRLQTSRNVDHVGLGTAFENSIYDQDYNIRVTMY
                     VQFREFNLKDPPLKP"
BASE COUNT          196 a          217 c          133 g          156 t
ORIGIN      
        1 atgacgtatc caaggaggcg ttaccgaaga agaagacacc gcccccgcag ccatcttggc
       61 cagatcctcc gccgccgccc ctggctcgtc cacccccgcc accgctaccg ttggagaagg
      121 aaaaatggca tcttcaacac ccgcctctcc cgcaccttcg gatatactgt caaggctacc
      181 acagtcagaa cgccctcctg ggcggtggac atgatgagat ttaatcttga cgactttgtt
      241 cccccgggag gggggaccaa caaaatctct ataccctttg aatactacag aataagaaaa
      301 gttaaggttg aattctggcc ctgctccccc atcacccagg gtgatagggg agtgggctcc
      361 actgctgtta ttctagatga taactttgta ccaaaggtca atgcccaaac ctatgaccca
      421 tatgtaaact actcctcccg ccatacaatc ccccaaccct tctcctacca ctcccgttac
      481 ttcacaccca aacctgttct tgactccact attgattact tccaaccaaa taacaaaagg
      541 aatcagcttt ggctgaggct acaaacctct agaaatgtgg accacgtagg cctcggcact
      601 gcgttcgaaa acagtatata cgaccaggac tacaatatcc gtgtaaccat gtatgtacaa
      661 ttcagagaat ttaatcttaa agacccccca cttaaaccct aa
//