LOCUS KM115407 3386 bp mRNA linear VRT 23-AUG-2014 DEFINITION Danio rerio transmembrane channel-like 2a (Tmc2a) mRNA, complete cds. ACCESSION KM115407 VERSION KM115407.1 KEYWORDS . SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 3386) AUTHORS Maeda,R., Kindt,K.S., Mo,W., Morgan,C.P., Erickson,T., Zhao,H., Clemens-Grisham,R., Barr-Gillespie,P.G. and Nicolson,T. TITLE Tip-link protein protocadherin 15 interacts with transmembrane channel-like proteins TMC1 and TMC2 JOURNAL Proc. Natl. Acad. Sci. U.S.A. (2014) In press PUBMED 25114259 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 3386) AUTHORS Maeda,R., Kindt,K., Mo,W., Morgan,C.P., Erickson,T., Zhao,H., Clemens-Grisham,R., Barr-Gillespie,P.G. and Nicolson,T. TITLE Direct Submission JOURNAL Submitted (09-JUL-2014) Oregon Hearing Research Center and Vollum Institute, Oregon Health & Science University, 3181 SW Sam Jackson Park Road, Portland, OR 97239, USA FEATURES Location/Qualifiers source 1..3386 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955" gene 1..3386 /gene="Tmc2a" CDS 72..2822 /gene="Tmc2a" /codon_start=1 /product="transmembrane channel-like 2a" /protein_id="AIK19896.1" /translation="MPKKSDTTRKLEDVGIEIDGDVDSAEEDKKSKGKGGKKAAGGKR GKASEDGEDEDEDDKPPKGRRAANKKKPAPVDEEDSDDDIPQRRSAGNRRRGNVRERG DGDKKKSGKKGRRGGKKNEKGKGKDSDKDSDKDEKKKKNSSGDESDSDEEDESMSEGE MAKLMEEVEEKKKLIANIRNKPWRMRRRLKVLKEAQQFVDKFEGALGKGKGRKLYAYK VMMMKKWIKFKRDFENFRTACIPWERKIKEVESHFGSSVASYFIFLRWMYGMNLVLFS LTFGLVVIPEVLMGLPYGSIPRKTVPREDQDTAMDYSVLTDFNGYCKYSVLFYGYYNN QRTIGFLKFRLPLSYLMVGIGTFGYSLMVVIRTMAKNADVGGGDGEDNEFTFAWKMFT SWDYLIGNAETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFLITCTLG GSGYLIYFVVKRSQEFQNMDNLSWYEKNELEIIMSLLGLVGPMLFETIAELEEYHPRI ALKWQLGRIFALFLGNLYTFLLALFDEVNAKLEEEESIKNASIWFLKEYYANYTANNP NDTGTPPPINPADAIRGPCWETTVGVEFVKLTISDIQVTYLTILIGDFLRAFIVRFLN YCWCWDLEAGWPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQ CWAVMACNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMSLPPSFDCGPFSGK ERMFDVVMETIDLDLPAFMGTLFGYVANPGLVISAVLLMVLAIYYLNSVSEAYKNSNN ELKKKMQMARDEEKNRRNNKDSTNQVMKDLEDLLPNRPPTPPSPRENIAEKNQGQGGK SAKVKPGTAGGVHLQKDVSLASANPNARGPVTRAPGPRGPGPLPGQPGAGRGQGPPPR RQ" BASE COUNT 1054 a 667 c 801 g 864 t ORIGIN 1 gcagtaatct gttagaccac aggagcaagg gaagaaattc tgagactaac aaagatcaga 61 agggcagcaa aatgccaaag aaaagtgata caacaagaaa actggaagat gtgggaatag 121 aaattgatgg ggatgtggac agtgctgaag aggacaagaa atccaaaggc aagggtggta 181 aaaaagcagc aggcggtaag cgaggtaaag ccagtgagga tggtgaggat gaagatgagg 241 atgataaacc ccccaaaggt cgtcgggcag ccaataaaaa gaaaccagca ccagtagatg 301 aggaagacag tgatgatgat attccacaaa ggagatctgc tgggaacagg agacgaggaa 361 atgtgcgaga gagaggagat ggagacaaaa agaagtctgg caaaaaaggc aggagaggtg 421 gaaaaaagaa tgaaaaaggg aaaggaaaag acagtgacaa agacagtgac aaagatgaaa 481 agaagaaaaa gaacagtagt ggtgatgaat ccgattcaga tgaagaggat gagtccatgt 541 ctgaaggaga aatggccaaa ctcatggagg aggtggagga aaagaagaaa ttaatagcaa 601 acatcaggaa caagccctgg cgaatgagaa gacgacttaa agtcctcaag gaggctcagc 661 agtttgtgga taaatttgaa ggtgctttgg gcaaagggaa aggcagaaag ctgtatgcct 721 acaaagttat gatgatgaag aaatggataa agtttaaaag ggattttgaa aattttagaa 781 cggcttgcat cccatgggag cggaaaataa aggaagttga gagtcacttt ggctcctctg 841 ttgcttcata ctttattttc ctccgttgga tgtatggcat gaacttggtc ctcttcagct 901 taacttttgg cctggttgtg ataccagagg ttctcatggg acttccatat gggtccattc 961 ctcggaaaac tgtgccgaga gaagaccaag atactgcaat ggactattct gttcttacgg 1021 atttcaatgg ttactgcaag tactcagtac ttttctatgg ctactataat aaccagagaa 1081 ccattggctt cctgaagttt cgtctccctc tgtcctacct catggtgggc attgggacct 1141 tcgggtatag cctcatggtt gtgatcagaa cgatggctaa aaacgcagat gtggggggag 1201 gggacggaga agacaatgag ttcacctttg cctggaagat gttcaccagc tgggattatc 1261 ttattgggaa cgctgagaca gctgacaata aatacgcctc catcaccacc agcttcaaag 1321 aatccattgt ggatgagcag gagaaccaaa aggatgaaaa cattcatctg agaagattct 1381 tacgtgtcct agccaacttt ctcatcacct gtacattggg tggaagtggc tatctcatct 1441 attttgtagt caaacgctct caagagtttc aaaacatgga caacctctca tggtatgaga 1501 agaatgagct tgagatcatc atgtctctgt tgggactggt gggtccaatg ctctttgaga 1561 ccatcgcaga gttggaggag taccatccac gtatcgctct caagtggcaa cttggacgta 1621 tatttgcact ctttcttggc aatctctaca catttttgct ggctctgttt gatgaggtca 1681 atgcaaaact tgaagaagag gagtctataa aaaatgccag catttggttc ttgaaggaat 1741 actatgccaa ctacacagcc aacaacccaa atgacacagg cactccacct cctatcaacc 1801 cagcggatgc catcagaggc ccatgctggg aaaccacagt gggagtagag tttgtgaagc 1861 tgactatatc agatatacag gtgacatatc tgaccatcct catcggtgat ttcttgagag 1921 cgttcattgt acgtttcctg aactattgct ggtgctggga tttggaagcc ggatggcctt 1981 cctatggtga atttgacata agcggcaatg tgcttggttt ggtatttaac caaggaatga 2041 tctggatggg ggcattctat gctcccggtc ttgtaggcat caatgttctg cggctccttt 2101 catctatgta ctatcaatgc tgggctgtaa tggcctgtaa tgtcccacat gagagggtct 2161 ttaaagcttc taaatccaat aacttctaca tgggcctgtt attgctcatc ctctttctga 2221 gtctcctacc tgtggtttac accattatgt ctttgccacc atcttttgat tgtggacctt 2281 tcagtggaaa ggaaagaatg ttcgacgttg ttatggagac cattgatctg gatctaccag 2341 catttatggg gactctcttt ggatatgtcg caaacccggg actcgttata tctgcagtac 2401 ttctcatggt actggccatt tactacctga attctgtgtc agaggcctac aagaactcca 2461 acaatgagct aaaaaagaaa atgcagatgg caagagatga ggagaagaac agacggaaca 2521 acaaagacag cactaaccaa gtgatgaaag acctagagga tctgcttccc aatcgccctc 2581 caacgcctcc ttctcctcga gagaatatcg cagaaaaaaa ccagggccag ggtggaaaat 2641 ctgcaaaagt taaaccaggc acagctggcg gtgtgcatct gcagaaagat gtgtcactcg 2701 catcagccaa tcctaatgca cgggggcctg tgacacgagc gccaggcccc aggggtcctg 2761 gacctctacc tggccaacca ggggcaggta ggggtcaagg tccaccccct agacggcagt 2821 gatgtgtgat attatttgtt gtatcctgtt tgtctgtaca caattttttt ttctagagaa 2881 agtaatattt aaaatgattt aatacatgct gttaaacacc tcagaaaaac gtaaacaatt 2941 tatatcacac tttcgtaaca ctttattttc atggaccatt tgagtgttat tagactgtct 3001 gcttaatatc tgttgactct gctcctttaa cagacattta cctgactaga agaaactttg 3061 caggtacatg tcaatttaca gtacactaaa cctaattctg actcctaacc caaccagcag 3121 tctacttata aactaatgag aattagtcgg catgtagatg taatgtaact taattcaaca 3181 aatgaaccat caaaataaag tgtgacctac acttttccta ctgtaaattg aatatcacat 3241 acatacggta gccccaaaaa aaatttggac cctcagtcct atataaaaat gtttgaattt 3301 aattgcatta gatattgact aaaacattaa ttgacatcct ttctcaaaaa gtctcatctt 3361 taactttact gagcaatttt gcagtg //