LOCUS       KM079229                1343 bp    DNA     linear   INV 21-JUL-2015
DEFINITION  Trupanea joycei from USA cytochrome c oxidase subunit I (coxI)
            gene, partial cds; tRNA-Leu (trnL) gene, complete sequence; and
            cytochrome c oxidase subunit II (coxII) gene, partial cds;
            mitochondrial.
ACCESSION   KM079229
VERSION     KM079229.1
KEYWORDS    .
SOURCE      mitochondrion Trupanea joycei
  ORGANISM  Trupanea joycei
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Tephritoidea; Tephritidae; Trupanea.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Viale,E., Martinez,I., Brown,J., Simonato,M., Squartini,A.,
            Bressan,A., Faccoli,M. and Mazzon,L.
  TITLE     Pattern of association between endemic Hawaiian fruit flies
            (Diptera, Tephritidae) and their symbiotic bacteria: evidence of
            cospeciation events and proposal of 'Candidatus Stammerula
            trupaneae'
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Viale,E., Martinez,I., Brown,J., Simonato,M., Squartini,A.,
            Bressan,A., Faccoli,M. and Mazzon,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUL-2014) a Department of Agronomy, Food, Natural
            Resources, Animals and the Environment (DAFNAE), University of
            Padova, Viale dell'Universita, Legnaro, Padova 35020, Italy
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Trupanea joycei"
                     /organelle="mitochondrion"
                     /mol_type="genomic DNA"
                     /host="Dubautia paleata"
                     /db_xref="taxon:1630703"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Archipelago Hawaii, Kauai, Alakai
                     swampt trail"
     gene            <1..709
                     /gene="coxI"
     CDS             <1..709
                     /gene="coxI"
                     /note="TAA stop codon is completed by the addition of 3' A
                     residues to the mRNA"
                     /codon_start=1
                     /transl_except=(pos:709,aa:TERM)
                     /transl_table=5
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="AKQ62417.1"
                     /translation="MAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIF
                     SWLATLHGTQLSYSPSMLWSLGFVFLFTVGGLTGVVLANSSIDIILHDTYYVVAHFHY
                     VLSMGAVFAIMAGFIHWYPLFTGLTLNPKWLKTQFSIMFIGVNLTFFPQHFLGLAGMP
                     RRYSDYPDAYTTWNIISTIGSSISLLSILFFLFIIWESLIXKRMVLYPMQLNSSIEWX
                     QNTPPAEHSYSELPLLTN"
     gene            710..774
                     /gene="trnL"
     tRNA            710..774
                     /gene="trnL"
                     /product="tRNA-Leu"
     gene            780..>1343
                     /gene="coxII"
     CDS             780..>1343
                     /gene="coxII"
                     /codon_start=1
                     /transl_table=5
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="AKQ62418.1"
                     /translation="MTTWTMFSFQDSASPLMEQLIFFHDHTLMILVMITTLVSYLMFM
                     LIFNKYTNRNLLHGQTIEMIWTILPAMMLLFIALPSLRLLYLLDEINEPSITLKTIGH
                     QWYWSYEYSDFFNIEFDSYMIPTNEMNLDNFRLLDVDNRVILPMNSQIRILVSSSDVI
                     HSWTIPTLGVKIDGTPGRLNQSNFLMNR"
BASE COUNT          468 a          178 c          150 g          544 t
ORIGIN      
        1 atagcaattg gtttattagg atttattgta tgagctcatc atatatttac agtaggaatg
       61 gatgtagata cacgagctta ttttacctca gcaactataa ttattgcagt accaacaggt
      121 attaaaattt ttagttgatt agctacactt catggaactc aattatcata ttcaccttca
      181 atactttgat cattaggatt tgtattttta tttactgttg gaggtttaac aggagtagtt
      241 ttagctaatt catctattga tattatttta catgatacat attatgttgt tgcacatttt
      301 cattatgttt tatcaatagg agctgttttt gctattatag caggattcat tcattgatat
      361 cctttattta caggattaac cttaaaccca aaatgattaa aaactcaatt ttcaattata
      421 tttattggag taaatttaac atttttccct caacactttt taggtcttgc aggaatacct
      481 cgacgttatt ctgattatcc agatgcttat acaacatgaa atattatttc tacaattggt
      541 tcatctattt cactattaag aattttattt tttttattta ttatttgaga aagattaatt
      601 ayaaaacgaa tagtattata tccaatacaa ttaaattctt caattgaatg aytwcaaaat
      661 actcctccag ctgaacatag atactctgaa ttacctttat taactaactt ctaatatggc
      721 agaatagtgc aatgaattta agcttcatat ataaaatttt taatttttat tagaaattta
      781 tgacaacatg aactatattt agatttcaag atagtgcatc tcctcttata gaacaattaa
      841 ttttttttca cgatcataca ttaataattt tagtaataat tactacttta gtaagttatt
      901 taatatttat attaattttt aataaatata caaatcgaaa tttacttcat ggacaaacaa
      961 ttgaaataat ttgaactatt ctcccagcaa taatattatt atttattgcc ttaccatctc
     1021 ttcgattatt atatttatta gatgaaatta atgaaccatc aattacatta aaaactattg
     1081 gtcatcaatg atattgaagt tatgaatatt cagatttttt taatattgaa tttgattctt
     1141 atataattcc aacaaatgaa ataaatttag ataattttcg attattagat gttgataatc
     1201 gagtaatttt acctataaat tcacaaattc gaattttagt ttcatcttca gatgtaattc
     1261 attcttgaac aattccaaca ttaggtgtta aaattgatgg gactccaggt cgattaaatc
     1321 aatccaattt tttaataaat cga
//