LOCUS       KL659427               37972 bp    DNA     linear   CON 24-JUL-2014
DEFINITION  Stachybotrys chlorohalonata IBT 40285 unplaced genomic scaffold
            scaffold315, whole genome shotgun sequence.
ACCESSION   KL659427 APWP01000000
VERSION     KL659427.1
DBLINK      BioProject: PRJNA185807
            BioSample: SAMN01819006
KEYWORDS    WGS.
SOURCE      Stachybotrys chlorohalonatus IBT 40285
  ORGANISM  Stachybotrys chlorohalonatus IBT 40285
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Sordariomycetes; Hypocreomycetidae; Hypocreales; Stachybotryaceae;
            Stachybotrys.
REFERENCE   1  (bases 1 to 37972)
  AUTHORS   Semeiks,J., Borek,D., Otwinowski,Z. and Grishin,N.V.
  TITLE     Comparative genome sequencing reveals chemotype-specific gene
            clusters in the toxigenic black mold Stachybotrys
  JOURNAL   BMC Genomics 15 (1), 590 (2014)
   PUBMED   25015739
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 37972)
  AUTHORS   Semeiks,J., Borek,D., Otwinowski,Z. and Grishin,N.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2013) UT Southwestern, 5323 Harry Hines Blvd.,
            Dallas, TX 75390, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Assembly Name         :: S40285v1
            Genome Coverage       :: 196.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..37972
                     /organism="Stachybotrys chlorohalonatus IBT 40285"
                     /mol_type="genomic DNA"
                     /submitter_seqid="scaffold315"
                     /strain="IBT 40285"
                     /isolation_source="building materials"
                     /culture_collection="IBT:40285"
                     /db_xref="taxon:1283841"
                     /chromosome="Unknown"
                     /geo_loc_name="USA: CA, Oakland"
                     /collection_date="2002"
     gene            complement(<64..>81)
                     /locus_tag="S40285_07963"
     mRNA            complement(<64..>81)
                     /locus_tag="S40285_07963"
                     /product="hypothetical protein"
     CDS             complement(<64..>81)
                     /locus_tag="S40285_07963"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69567.1"
                     /translation="VQSRQP"
     assembly_gap    98..233
                     /estimated_length=136
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    396..517
                     /estimated_length=122
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<638..>964)
                     /locus_tag="S40285_07964"
     mRNA            complement(<638..>964)
                     /locus_tag="S40285_07964"
                     /product="hypothetical protein"
     CDS             complement(<638..>964)
                     /locus_tag="S40285_07964"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69566.1"
                     /translation="EDLKHWRAKGPIGKLHNIVKFIWASPQHTEAFKAHAREQEEAKV
                     YKLAEESTAELKVIQNNSTRWNSTYMMIEHALLKQLELNSFIQELGLEADASKRAPIA
                     NILTSDD"
     assembly_gap    985..1083
                     /estimated_length=99
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<1572..1677)
                     /locus_tag="S40285_07965"
     mRNA            complement(<1572..1677)
                     /locus_tag="S40285_07965"
                     /product="hypothetical protein"
     CDS             complement(<1572..1607)
                     /locus_tag="S40285_07965"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69568.1"
                     /translation="MKRPALTATVVP"
     assembly_gap    1700..1763
                     /estimated_length=64
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    1901..1971
                     /estimated_length=71
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    2322..2416
                     /estimated_length=95
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<2575..3182)
                     /locus_tag="S40285_07966"
     mRNA            complement(join(<2575..2653,2702..2813,2872..3086,
                     3133..3182))
                     /locus_tag="S40285_07966"
                     /product="hypothetical protein"
     CDS             complement(join(<2575..2653,2702..2813,2872..3086,
                     3133..3182))
                     /locus_tag="S40285_07966"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69569.1"
                     /translation="MPTSRYLKMDLAVPRLNRWNVCLCQRHVSGAHAVHRGAARARSF
                     AAYETARRAHVSATDYTRLTVAADDKPTTCRARPDSGRAAPKPAAAARVPASAGPGAS
                     TKIASRRRPRQPRRVPSRRTPRARDLRLETAAPRPATAAQRNTVALSYVD"
     gene            4029..5716
                     /locus_tag="S40285_07967"
     mRNA            join(4029..4043,4088..4464,4527..4688,4772..5159,
                     5234..5392,5447..5716)
                     /locus_tag="S40285_07967"
                     /product="hypothetical protein"
     CDS             join(4029..4043,4088..4464,4527..4688,4772..5159,
                     5234..5392,5447..5716)
                     /locus_tag="S40285_07967"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69560.1"
                     /translation="MSGLSAALSLPALLDTGAGVEAQLTLSSHRTSTWTMYGATTVSH
                     APHGIPTLVYNCAKMPAICRNVHVTYPLNTINQGTGPNGHGTLQGQSHLLLDFDRGGN
                     AATRRGIACSGNLAAGHLGNPCPSLNQPHTVPFRKMLGRGSYPAARFNPTNIALGNPG
                     YNTIANAAGQHSGMMWMCDEFPPASTVEGGSGARTICDPQNGRCDSNNDNGPPGGVNS
                     EQNFQSWAHTALRSNMFDPPGRHGVYRFHFVTRFNTDIDGAAAEVHWYGEDATFAVGF
                     GQPEKRYLDRTPAVHRAVESFYGNRTSVITRQLLQEEEYKVFRRHWIDNLHGNETCAP
                     NVSISNCNATALCGRDSLNGEVVCRLNVCCSHYGYCGVEDDFCLGAGPHAPCQEGFGS
                     CNVVSPPSCGGNSAFARSIGYYQLANMRERQCNRIPPDQIRTEGFPHLFAAFATINPS
                     TFAVGP"
     gene            5849..6888
                     /locus_tag="S40285_07968"
     mRNA            join(5849..5937,5992..6116,6203..6459,6532..6888)
                     /locus_tag="S40285_07968"
                     /product="hypothetical protein"
     CDS             join(5849..5937,5992..6116,6203..6459,6532..6888)
                     /locus_tag="S40285_07968"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69561.1"
                     /translation="MNPTRRRRFISLVTFLEEHGFDGVDLDWEYPGAPDRGGRPEDTA
                     NYVSLIREMREVFGTRFGISMAIPRATDEDERQIGRVVLGHTNVPEIANWTLPLYYDG
                     LDPAKLNLGLAYYARGYTVAVSDCNAIGCDWMSTSRPAPCTNFGGVVSLEEIERMWIG
                     YDNLDTIHMKKRWASQRCFGGTMVWSVDMYSGSGSGDVPDGSGDVPDGGGSENPGDPG
                     GGQGRGSEMVYIDPEVWEEDTPEVNCWPPCTLVMPPLLLDESITISLPPYETSLDVA"
     gene            6946..8064
                     /locus_tag="S40285_07969"
     mRNA            6946..8064
                     /locus_tag="S40285_07969"
                     /product="hypothetical protein"
     CDS             6946..8064
                     /locus_tag="S40285_07969"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69562.1"
                     /translation="MTITTIDVWHITVRETRTGTGTRTGARATHHITPSIRPPTFSIT
                     NNLPQTSNDGVTQPPSTRTITPPPYPWTFTPPDPEATTTRSNTPEEDIPEFPVVTWRP
                     GNPGPRCRSGCGRPCRLFCSFPCLLDCQGPGLDVPDPSNSATADSACAAAHGPKPEPD
                     HQARTRPSGPRPAHRRHRRAPSPRTRITRRRSARAPSSGACRSPRSGPTTAPPASSPA
                     RRGRRLAPPPRRTRSRPAPNSDTEEVDCYNNGQFINRALVIEALDYFCNAFEGQVLDA
                     LRPGTQRTLTCQHGVHCWAAGCFVNVVMRVTVKHECRFRMGGNGPREECGRILRRIID
                     ECDTSSTQFKQGGTLSSNCADWSFDPNDNWGQDGPRLC"
     mobile_element  8884..9082
                     /mobile_element_type="transposon:NHT1"
     assembly_gap    10008..10075
                     /estimated_length=68
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(10947..12256)
                     /locus_tag="S40285_07970"
     mRNA            complement(join(10947..11888,11942..12175,12227..12256))
                     /locus_tag="S40285_07970"
                     /product="hypothetical protein"
     CDS             complement(join(10947..11888,11942..12175,12227..12256))
                     /locus_tag="S40285_07970"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69563.1"
                     /translation="MASISVRASLVLALLLGPFASYLAGRLRVLSLSYYNAPGRMPLH
                     ANFSSYDIKFQDRIRNCEDVVLLRDRRIALLACDPGRENWNTVMGDFVHDAEPDANAE
                     LYAYSYDSEDPDALVRIEIVGLDSELRTIGFDFHEPSAMLLVTNHLRQGGPRIEQLRL
                     DLDTFTATHLRTLSHPLINIPNAIAVQSDSQFFVTNQHRFVAARGRLLWFLESYLAPP
                     LATVVHARILASGEIDAHVVVRQAYPNGVTLLNSSTLAVAATSQRLVHLYTVNQAKPG
                     LSDPTLRLESTIRDLPFLPDNLVTAPDGALLIAGHPHVPSLAAFSHSRRVCHRPNILA
                     GVGTDAARKCENTRAASWAGEWTPQDGFRDIYSGWDYPTSATVARNRGHGMGIVAGLY
                     AKGILVWRD"
     gene            complement(13488..14817)
                     /locus_tag="S40285_07971"
     mRNA            complement(join(13488..14512,14595..14817))
                     /locus_tag="S40285_07971"
                     /product="hypothetical protein"
     CDS             complement(join(13488..14512,14595..14817))
                     /locus_tag="S40285_07971"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69564.1"
                     /translation="MADPTSMSPEEYEAFMNGPATIPPDGEVPDFTRIDNRNGLAVFV
                     LSFNIIVPSLFTLFYAYTRVFVYKEFVHSDVYFVLAYGLFIAFMAFLFRMLYTFGMHV
                     NQWDFQVREMPPFMADTFTTVILYILGAMFSKIAILLQWTRIFTPKGTRTDRKRKVMY
                     WSSMFVIWFNVAYHLVAVLTVIIPCAPFYGNDEQGAQLFTCVPEIYFDLIEACLNVVL
                     GFIIMAIPQQVIWSLQMPLRQRLGISFLFLIGVGAIAVAIAKVIICIQWFEDRGVIGD
                     ADPARANSTYGMTDQLYVNAAEQALHILIYTLPATPKAMRSLGITRVFSSLGSTFSGT
                     LGPLLSRSGASSSSQQRGNSNLQLESPEADEAALVSVQSYPSATHMDSSPGRRMKTKP
                     SFNSTRTSRSAKSSVPRSSTNVV"
     gene            15858..17078
                     /locus_tag="S40285_07972"
     mRNA            join(15858..15978,16051..16174,16240..16420,16488..17078)
                     /locus_tag="S40285_07972"
                     /product="hypothetical protein"
     CDS             join(15858..15978,16051..16174,16240..16420,16488..17078)
                     /locus_tag="S40285_07972"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69559.1"
                     /translation="MLAAARICASLDIFNQLASDAKPKNATQLAEASGAEPRLLERFL
                     KHLVNGNIVDEAGPGLFKANAVTRLYATPGATGVVVHMYEGTGMVLPGANEALRKTGY
                     RMPADDSTSLFRLATGLDTDYFTWLNRPGNEASRDAFQKTMGFTAYGTKWFETLPLDE
                     VLGGKNEVAPDAPLIVDVGGGYGQEMVAFHKAHPDRSGRLILQDLGPTIQRVDVAAIS
                     PVEATVHDFFAPQPVKGAKAYFLKRVLHDWDKGKCVAILRNLKEAMIPGYSKILVNDF
                     VISDVGADWFSTGIDIMMMIALSAQERKEQEWREMVSEAGLKVHKVWSTEDADGKLIE
                     IVAV"
     gene            complement(17248..18515)
                     /locus_tag="S40285_07973"
     mRNA            complement(join(17248..17650,17735..18231,18288..18515))
                     /locus_tag="S40285_07973"
                     /product="hypothetical protein"
     CDS             complement(join(17248..17650,17735..18231,18288..18515))
                     /locus_tag="S40285_07973"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69565.1"
                     /translation="MAAPSPGDVEARVKKNLEGTPYEASALTGLSGGSVNFAYTAALV
                     KPLDDGTKEVFVKHAEPYMKVRPDTALSLDRANFEIECFKRLSETPIIGKTDQGDSHS
                     ITVRTPKYYHYDEANANQILEFMPQGITLKDYVPKYYPESSDSSEPEAREIGKTLGSW
                     LKGFHQLAANHADFRAVAEKNGQGQFFRHLVTFAWLKDRVEQYPAVLGDAKDIFAEVE
                     QAVTAELKDPSKTQVIHGDFWTGNLLLSDAPMPQDGGNVILFVVDWEMMHLNVPNADF
                     GLMIAEFYFFSLFKSIPAGLWMLEAMVEAYGPVTEEFAYRTAIQIGAHLVCVLTDLNR
                     LPAEQLEKAAAIGKDIIVHAWNKDRAWFETGDLACIFHQVK"
     gene            19601..20651
                     /locus_tag="S40285_07974"
     mRNA            join(19601..19637,19702..19949,20051..20330,20389..20651)
                     /locus_tag="S40285_07974"
                     /product="hypothetical protein"
     CDS             join(19601..19637,19702..19949,20051..20330,20389..20651)
                     /locus_tag="S40285_07974"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69558.1"
                     /translation="MDIAGYAYIVGGGSGIGKETAIAFAKEGAAGVAIADINLAAVEE
                     AAKEAKAAATNPDFTELTLQVDVAQEDSVDAGTKKVVEVFGRIDYCLISAGIGIPKAM
                     ATTEVETEFFKRMMDINVTGSFLVTRSVGQAMKSQTPTPCTSVKPERAITRGTIVHMG
                     STASYLAGPGRCAYVVSKHAVLGLSRVAAIDLVPHGVRVNCLCPGWVDTPLIQATKSS
                     TSGLDDMVKKLVPMGRLGMTEETADAILYLCSPRSSYVNGCALVMDGGTTVIVRSGI"
     gene            21116..21823
                     /locus_tag="S40285_07975"
     mRNA            join(21116..21424,21464..21823)
                     /locus_tag="S40285_07975"
                     /product="hypothetical protein"
     CDS             join(21116..21424,21464..21823)
                     /locus_tag="S40285_07975"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69557.1"
                     /translation="MATAPPEASDPIKGSIGYANHDFPIAGLKRVQRNITGFDEEGKS
                     VFLSSDSGDFQHVMGDKQAIQMIMYSTRETPADLNDNIDIQKAAEVRVGASLVLLFEI
                     EPPVFYRNGTVLRMIDFGPDVEGPMHRVMALVYGVIVEGVFLLTLDSGETKIFRQGDI
                     IIQRAAAHKWKNITGNGTMPGRMLYILLDIKDYYHNGIKVDEYMGTLASEHENEGRAP
                     ESAQ"
     gene            23398..31346
                     /locus_tag="S40285_07976"
     mRNA            join(23398..23491,23559..24348,24394..24604,24655..24778,
                     24833..25933,26002..29692,29746..29911,29994..30330,
                     30384..31199,31297..31346)
                     /locus_tag="S40285_07976"
                     /product="hypothetical protein"
     CDS             join(23398..23491,23559..24348,24394..24604,24655..24778,
                     24833..25933,26002..29692,29746..29911,29994..30330,
                     30384..31199,31297..31346)
                     /locus_tag="S40285_07976"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="KFA69556.1"
                     /translation="MAQGHGPNGVSAPSLLTHTAEMDDPPCIVGMSCHLPGGVRSPSD
                     LWDFVIQKRSAQGRVPPERFNIDGFLHRSGDDKNHAGVVESDGGYFLDDDPRQFDNQF
                     FGINNLEAIYMDPAQRKLLEVVYECLEGAGVSMEHASGSNTGVYVGNFTLDYMIGQVR
                     DPDYIHRYHATGMSPALMANRISYVFDMRGPSLTLDTACSSSMYALHCAIQDLNNGDC
                     EGAIVACANLLGGAEQQLMTIKGGVVSTTSTCHTFDSSADGYGRGEAANALYIKKLSA
                     ARRDGDRIRAVIRGTAVNSDGRTPGISQPSSDAQEALIRRTYKKAGLPRSETDYIECH
                     GTGTPVGDPIEVAGVAQAFECGIDRPLMIGSVKTNFGHGEAASAITSLIKVTLALEKG
                     IIPPTFGIKKINPALRLDSFNMHVVQEPQSWPRALRRASVNSFGFGGANGHAILESLE
                     SYLGNERAKHFHGYHPARQVNGSHQANGVHPVNGGHQVNSSQLNDVHQINSVQKANGI
                     HHANGVDGVHLRAGPALIPVSAASKHALEARLVQLATAIQTHKHDARYLENLAFTLSE
                     RRSHMRYRSFLIANGDGEGASGQPAGITSGDGTAETPPIVFVCTGQGAQYPGMAKELL
                     QSNPSFAATIRSLDEMLQAVPERPNWTLEETILDSVSANQVHHVTRSQPLCTAVQIAL
                     IDMLAGWGVRPVSTVGHSSGEIAAAYAAGFLSAKQAILTAYYRGYAVDKLTTSGRMMA
                     VGSSSEDAASLIRDKGLENQVRVSCVNSPKSVTLSGSTAGIQCLRQELEVQGSFVRLL
                     ETNGRPYHSHMMQEISPLYEKLLEPLFDGGHKRTTPSATMYSSVGQGGESLRVFNSSI
                     PSPARYWCENLESPVQFGPAVEKLTGDTGKLRLVEIGPHAALKGPLEQIRKGLGLVEK
                     AFAYTSTILRKERSDNCMLELAGTLFQHGYRIHWPAVNGLARRLHPVADLPPYPWDYS
                     AGILYTEPRASHELRNRTHPRHELLGSRQLAGDGIEHKWRNILRLSEVPWLEDHKLES
                     QILFPGAGYLCMAMEGLKQIQGIERTDSETSFIFRNVNFLAALVISEQGQGGIGGGPE
                     MHTSIKPRKLSAVTTSKNWLEFSISSWADGQATLHCTGNITTQTGQSPIHPTGQTTTK
                     VESFEEYEERPTEPVYSKLNEQGLCYGPTFQALTKIKTDSSRIRTDGVFHTRLTQNGT
                     GSDVTRQPYGTHPVLIDACLQTPFIAVTAGKVSQQKAFLPIYIGQCQIRATGPADVGR
                     EGAIHTRSVMTSPGTLRASCTLSGGDSTGAAVINLETVRYTLYNGKGSAPPPDRLHGD
                     NASSQQRHPCLRVCWKPDLLRLTHESENELRNHVSRFVAVQEPDIAEKEVFARLAALL
                     DLAGHKNPRMRVLELDSSDNLSSAADWRRLLGWGSSFFSRCQSWTVATLGQGQIQLEE
                     AGEQGPFDVVLIPTHAAASKFWDQMPQQIVSLVGAQGIVISRASGSASENLQARGFDT
                     LDVGYRCLLAVPQKDKLSAVAGKPVVLLVGEVSSPSVTKLAKTLSASLLDSFGAAQVD
                     MISLQDLPSRTITTETIFISFLEAENGLLPTMSSEQMDLVRRVSDTASHLLWVTGSDA
                     MSGYRNPDLALSSGLFRCLNVEQPGKRFAVLDIGQWLATSPGASSSPMCASIVRALTA
                     RYTKDDREFIHYESMLHISRFVLDTSMNSLFTSRLKSPGATSDGHVLHTRLKDATPAQ
                     LSLGKVGQLSSLYFQELYEPVSYPCEGYVDVDVRAVSINAKDVYTMFGRVETQESSLA
                     LEFSGVVKAVGPNVDLKPGDRVVALAPNHWKTTERVHASAVHQLQPSEEFAVMSTLPV
                     VYATAIYALRDRAQLQPGETVLIHAGAGAFGFAAISLALSMGATVYTTASTPAKRQFL
                     MSELNLSESHIFNSRDASFASGVRKATDGNGVDVVVNSLAGDLLHDGWSCVAEFGRFV
                     EIGKKDLVESGRLDMDVFLRNATFTAFDLSELFYNKTQRQRGTLNRLTKKALELYRSG
                     NIRAVPITKYDVGNVVEAYRHFSKQGRVGKIVVTLENPDSFIPTIPALFRTRFQEDKV
                     YLLVGCLGGLGRSLSRWMMSRGARNFVFLGRSGTNKPDARNLVTRLQDAGAKVHVVRG
                     DVVDSNAVAEAVKACEAIHLPIGGAIQATMAVSASNFREMTSEAWHAAIKPKWQGTWN
                     LHQALQGHAMDFFLLMSSLSGTLGSATESNYCAANSFLDAFAQWRSRQGNPTKAVGLG
                     VISDVGYVHENSEVRTWLSRRGLRSLTEDEMLQMIDLSLMPGSQEPHLLTGLEPTRLR
                     ELHAQGFEVDFEGWWDPRSAIIVSSLGEQKVSGASKGSKGVGNGLGNALPAWLRSMSK
                     PIVDTLQEDADADSLLDAVLQAISRRLSGLILLPLKEMDASKPIVGYGVDSLLAAEYR
                     HWLWSALKVDVPLLTLTKGDKSDGKAVPGGALQAAYL"
     assembly_gap    31528..31630
                     /estimated_length=103
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     repeat_region   33083..33126
                     /note="(TGAG)n"
                     /rpt_type=tandem
     assembly_gap    33977..34082
                     /estimated_length=106
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    34147..34309
                     /estimated_length=163
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     mobile_element  35862..36836
                     /mobile_element_type="transposon:MOLLY_SN"
CONTIG      join(APWP01000917.1:1..97,gap(136),APWP01000918.1:1..162,gap(122),
            APWP01000919.1:1..467,gap(99),APWP01000920.1:1..616,gap(64),
            APWP01000921.1:1..137,gap(71),APWP01000922.1:1..350,gap(95),
            APWP01000923.1:1..7591,gap(68),APWP01000924.1:1..21452,gap(103),
            APWP01000925.1:1..2346,gap(106),APWP01000926.1:1..64,gap(163),
            APWP01000927.1:1..3663)
//