LOCUS KL596970 526801 bp DNA linear CON 09-JUL-2014 DEFINITION Opisthorchis viverrini unplaced genomic scaffold opera_v5_352, whole genome shotgun sequence. ACCESSION KL596970 JACJ01000000 VERSION KL596970.1 DBLINK BioProject: PRJNA222628 BioSample: SAMN00996407 KEYWORDS WGS. SOURCE Opisthorchis viverrini ORGANISM Opisthorchis viverrini Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Opisthorchis. REFERENCE 1 (bases 1 to 526801) AUTHORS Young,N.D., Nagarajan,N., Lin,S.J., Korhonen,P.K., Jex,A.R., Hall,R.S., Safavi-Hemami,H., Kaewkong,W., Bertrand,D., Gao,S., Seet,Q., Wongkham,S., Teh,B.T., Wongkham,C., Intapan,P.M., Maleewong,W., Yang,X., Hu,M., Wang,Z., Hofmann,A., Sternberg,P.W., Tan,P., Wang,J. and Gasser,R.B. TITLE Opisthorchis viverrini - life in the bile duct JOURNAL Unpublished REFERENCE 2 (bases 1 to 526801) AUTHORS Young,N.D., Nagarajan,N., Lin,S.J., Korhonen,P.K., Jex,A.R., Hall,R.S., Safavi-Hemami,H., Kaewkong,W., Bertrand,D., Gao,S., Seet,Q., Wongkham,S., Teh,B.T., Wongkham,C., Intapan,P.M., Maleewong,W., Yang,X., Hu,M., Wang,Z., Hofmann,A., Sternberg,P.W., Tan,P., Wang,J. and Gasser,R.B. TITLE Direct Submission JOURNAL Submitted (27-NOV-2013) Faculty of Veterinary Science, The University of Melbourne, Cnr Park Drive and Flemington Road, Parkville 3010, Australia COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. January 2012; Opera v. January 2012 Assembly Name :: OpiViv1.0 Genome Coverage :: 54.0x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..526801 /organism="Opisthorchis viverrini" /mol_type="genomic DNA" /submitter_seqid="opera_v5_352" /db_xref="taxon:6198" /chromosome="Unknown" /geo_loc_name="Thailand: Khon Kaen" /collection_date="Jan-2010" gene complement(<7689..>8063) /locus_tag="T265_15100" mRNA complement(<7689..>8063) /locus_tag="T265_15100" /product="hypothetical protein" CDS complement(<7689..8063) /locus_tag="T265_15100" /codon_start=1 /product="hypothetical protein" /protein_id="KER21388.1" /translation="MTYPYTRDYEASAHGDMTPESNLDLFMEFLNCVMGQDFGQALVL CKQLMEVEPGNQVVREFLPLLSEANTMKENGYFHAETDSEDYFSESDRGEEDHSTQSS SSSSESYEYSTSDSDSHGNRHKR" gene complement(<8088..>30227) /locus_tag="T265_10262" mRNA complement(join(<8088..8151,29878..>30227)) /locus_tag="T265_10262" /product="hypothetical protein" CDS complement(join(8088..8151,29878..30227)) /locus_tag="T265_10262" /codon_start=1 /product="hypothetical protein" /protein_id="KER21389.1" /translation="MNFDQVDINKTVKAPLSSGFGPIDSEGGEVFEFKAHEFHLATSK GTPYHPLPITVSTSETFKPVTLQKTSPLRLASEYKRLSLLPRTSKDSGKVMTLCDKNL TNTTATQARHAGTIKLQYTLRFENGCQALKMTRTE" assembly_gap 8861..12109 /estimated_length=3249 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15156..24792 /estimated_length=9637 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 27085..29381 /estimated_length=2297 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<30861..>32873) /locus_tag="T265_10263" mRNA complement(join(<30861..31011,32524..>32873)) /locus_tag="T265_10263" /product="hypothetical protein" CDS complement(join(30861..31011,32524..32873)) /locus_tag="T265_10263" /codon_start=1 /product="hypothetical protein" /protein_id="KER21390.1" /translation="MNFDQVDINKTAKVPLSSGFGPIDCEGGKVFGFKVHEFHLAASK GTPYRPMPITVSTSEIFKAVTLQKTLPLRLASGYKRLSLLPRTPKDSSKIMTLCDKSL TNTTATQARHAGTIKGERREDWTDVESRTSSVHPETYADNRKTRTTDSIRISCSLRIE FRKKEE" gene <47954..>48316 /locus_tag="T265_10264" mRNA <47954..>48316 /locus_tag="T265_10264" /product="hypothetical protein" CDS 47954..48316 /locus_tag="T265_10264" /codon_start=1 /product="hypothetical protein" /protein_id="KER21391.1" /translation="MCEISVIYLNSVTANQTPVKSYVPLVYFTGPRLALSTQLPVFNI HRRDFDRGYLVEIGLVRLTDSVNCMHNVLETPSDIKLFAPSKTIERRPASRLVTGPAC GYPYYTAVDHSFAKKQVP" assembly_gap 52709..53253 /estimated_length=545 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <55952..>58131 /locus_tag="T265_10266" mRNA join(<55952..56046,58005..>58131) /locus_tag="T265_10266" /product="hypothetical protein" CDS join(55952..56046,58005..58131) /locus_tag="T265_10266" /codon_start=1 /product="hypothetical protein" /protein_id="KER21392.1" /translation="MEPFVSDRLKHRPKHHQVTISYLNLIPKSRHTLKKRSTALTLDE SMRAGIIPGFSSLDRGIPEAEVEFESRTF" gene complement(<57996..>74202) /locus_tag="T265_10265" mRNA complement(join(<57996..58209,60907..61077,61502..61605, 63143..63244,64365..64499,71224..71279,71323..71388, 71428..71544,73968..>74202)) /locus_tag="T265_10265" /product="hypothetical protein" CDS complement(join(57996..58209,60907..61077,61502..61605, 63143..63244,64365..64499,71224..71279,71323..71388, 71428..71544,73968..74127)) /locus_tag="T265_10265" /codon_start=1 /product="hypothetical protein" /protein_id="KER21393.1" /translation="MANFDLSSLKDALDSADKEQPKLTSVDLEGIAELIKSGAVKNIV TMAGAGISTDDLERLTGLPEDKLIEAHGTFHTGHCIACKKLYPLEFMAEAVMNDKIPK CQANSCDGVVKPDIVFFGEALPDKFHTNVGPDFSVCDLLIIIGTSLTVMPFCMLVDKV GAGVPRLYINREVPEMGLGCVPWDDPENRTDVFFRGDADDGVQRLSELLGWKEELLDM KRSIDATLGEVAAKRAGTEKNRIENEPRKARLFKWLEREFIDQNVRDSNSTSASGIPL SRLEKPGIIPALMLSSSVRAVERFFSLIDFQFLVAVSLTISTYXFKWLEREFIDQNVR DSNSTSASGIPLSRLEKPGIIPALMLSSSVRAVERFFSLM" gene <58349..>61038 /locus_tag="T265_10267" mRNA join(<58349..58401,60912..>61038) /locus_tag="T265_10267" /product="hypothetical protein" CDS join(58349..58401,60912..61038) /locus_tag="T265_10267" /codon_start=1 /product="hypothetical protein" /protein_id="KER21394.1" /translation="MKCERTDGKQQAFDQLVWLKKRSTALTLDESMRAGIIPGFSSLD RGIPEAEVEFESRTF" assembly_gap 59005..60089 /estimated_length=1085 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 66663..67840 /estimated_length=1178 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<79253..>109149) /locus_tag="T265_10268" mRNA complement(join(<79253..79642,82027..82429,86108..86398, 88466..88795,89006..89368,90447..90695,95962..96232, 96837..97092,97601..97892,98278..98341,106573..106793, 108663..108803,108844..>109149)) /locus_tag="T265_10268" /product="hypothetical protein" CDS complement(join(79347..79642,82027..82429,86108..86398, 88466..88795,89006..89368,90447..90695,95962..96232, 96837..97092,97601..97661)) /locus_tag="T265_10268" /codon_start=1 /product="hypothetical protein" /protein_id="KER21395.1" /translation="MIAHIDAGKTTTTERMLYFAHRTYHIGEVDRGNTVTDYLPEERE RGISIVSAAACLSWNQHTIHLVDTPGHVDFTMEVERCLAVLDGAVTILDGTKGVQAQT RTVWHQADRYNLPRLVFVNKLDRENADFQLSLSSLCSQLASTVRYVPIHWPVSVQSLA KPGENPSPDRKEAKSARRSAGTHFMGLIDLVTMKFLDWSQCTSPDALPQTSDLLHKLH HSGPVSTSNFSSEFMQTVLDARIRLLAELAEVDEELADHFLAVDHPEHLMPSELIQSA LKRATHRGQVIPVLVGSSRQNIGIQPLLDAIVDYLPNPTNHKAPAPVQRLIHQVWSMY SHSRPPTGFDLPVADSAQPPVLLVFKVCFDPHRGPLSLVRIYSGSVKKGSLLTNWSLN RTVPITEKVLGVFQMTGDQRESVDCATTGSIVALAGLESTHSGDLLGPVRRTSTSNKD SSIDQNSSEEEDHDVWINSLPELNKCEPVVYAALEPGSLSAVRPLEYALACMQREDPS FTARLDAETGQWIVGGMGDLHLEVILSRLQREYKVDVRNGPLLIAYKECPLVRSKQQQ QQTIRTPAFQGYGRVTGSVDGSEKVAFAIVSVEASEYPKPQIHFDRSWLGHVEQTGKN EIGSPHGRLQHNIREVCLSTLEMAGPLMRSPVVNVDLRLHRVACESLSRLPQSIADVD VSQLPTLTRLPSSNSALASFITLLRSAVAAAVTDGVRKIPEWRIMEPMMSVELRVPTH SDNQSDSLSRFLGDLSARRAEILAVDSADSADPSTSTSEACHVIQALAPLSELVGYSA TARSISSGRAEVHMKLAEYRPVSQEYQAQLLNRLQWRAPVD" assembly_gap 86681..86721 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 102183..104030 /estimated_length=1848 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 113904..117300 /estimated_length=3397 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 120307..120847 /estimated_length=541 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 134228..134652 /estimated_length=425 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 136444..136651 /estimated_length=208 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <150668..>161110 /locus_tag="T265_10269" mRNA join(<150668..150893,153642..153905,155029..155345, 156822..157001,159825..159953,160961..>161110) /locus_tag="T265_10269" /product="hypothetical protein" CDS join(150668..150893,153642..153905,155029..155345, 156822..157001,159825..159953,160961..161110) /locus_tag="T265_10269" /codon_start=1 /product="hypothetical protein" /protein_id="KER21396.1" /translation="MARQLDSGIMTAAPTECPSFELTPSNLEPRDATVLVGVPSIRFP SAAEVAALSAFGSQLASARFSDTVFATDEYLGPNSLFSDFGALEFVGRYFIKLQSDMN QNDMLALLEKLHRIVNSQLWSFKVSQPTMRRVLNSLAIADWTSDVLETAWLLYDESLN EAVSRQKTAYRKAQPFLISAEVKCKDHQNLGRSGLGLRKMGSQWQGQLVVTDGPRNVH TIQDGRGSKRVSGAQLRKRHGTPKELSNIPASGTNLTDVGGTQAAPKGDGCLGIVSAY EAVKTTVLALGQLIVTDQWPDSINGSEMDLCNVCPPKLDVSTRYYRFADAVTKLPSRI GAAGEIVFNGSVFNHNARVRLMRCDTDGSESNTLCEDMTEMRGASVSRGRSTLFNGCG MYLQHRTIKETIHKVAENYSAAHDRFRPS" gene <161153..>177819 /locus_tag="T265_10270" mRNA join(<161153..161324,167054..167142,167381..167560, 168769..168929,170351..170535,171675..171887, 172435..172610,173938..174040,174124..174400, 175868..176090,177658..>177819) /locus_tag="T265_10270" /product="hypothetical protein" CDS join(161153..161324,167054..167142,167381..167560, 168769..168929,170351..170535,171675..171887, 172435..172610,173938..174040,174124..174400, 175868..176090,177658..177819) /locus_tag="T265_10270" /codon_start=1 /product="hypothetical protein" /protein_id="KER21397.1" /translation="MIYLNPNCTVFAKYTHLQFNSVFTRDSTESVVYDILQLNVLHTG RLIFQLARFSRYRTSVYPLLHQRTLDAFEFSRLNRRTYSRLSHDPPFVIKTEDGWTGY SVEVFERIADALGLDYVYIEQLDHIYGVKLPNGQWNGVIGEIASKHADVGLGPIVQDG ERKLVVDFTIPYYVSAGLAMVVSTKTDQELGPFFFLEVFTGPVWICCISAVVFVSLLV YALDRFSPYSFQNQALKDNGASEAGTMFTLKESVWYVLGACTQQALTILIYFIRPVWI CCISAVVFVSLLVYALDRFSPYSFQNQALKDNGASEAGTMFTLKESVWYVLGACTQQG ESLDPRSTSTRILITGHWIFVVIMVSMFSANLSAKLTVSGLKEEIKSLEQLAGQTEVK YTLRSNSAEYAFFRKMYGVEESLFRIWRYLSSNLTEFSSNYSVWQYPITERYGTIFKR MEEWGFTHDTVDSLDHVRKGWVVFMESSLAAYHIASACDLKELGERIGSWDYGIALPL KSFLTPNMNSMILHLKAENILDDLEHKWWSANTTGCPEPSTSIGFGLEQVGGMFIILA CGFLSAALILGMELLFYRVIMKRLRKGNKTAPMEEEKPADKMNARGEQGGLPPPALVV TPPDCVNVNDDSGAPPPYAQNP" assembly_gap 190590..190665 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <193742..>194675 /locus_tag="T265_15101" mRNA join(<193742..193914,194116..194289,194330..194383, 194424..194527,194563..>194675) /locus_tag="T265_15101" /product="hypothetical protein" CDS join(<193743..193914,194116..194289,194330..194383, 194424..194527,194563..>194673) /locus_tag="T265_15101" /codon_start=1 /product="hypothetical protein" /protein_id="KER21398.1" /translation="YLGAEILRIAHLQINLIFTGDSTESLVYDAFQLNVLHTSRLMIH LATIFKISQYISIPHLFDCDARLLINKRKMTTNASREINFVHQAEIMTETIKKELRHQ KLYTQYGINPFKKLCPLASKPNAEQREEEEDKHFLEVLNRAALEPTKKYLEPETENQE YGWISLPLMDMDRSDARFYHPNVACEMTKFMEQTWKQKEQRRLNA" gene complement(<200012..>257985) /locus_tag="T265_10271" mRNA complement(join(<200012..200390,200994..201307, 205556..205877,208894..209252,210646..210883, 211063..211240,212492..212662,212726..212896, 213571..213795,216427..216672,217337..217601, 217969..218217,220052..220276,220900..221022, 222375..222599,223220..223602,225879..226006, 226096..226345,229112..229322,229918..230073, 243332..243486,244660..244789,250049..250354, 253097..253278,254739..254912,256886..>257985)) /locus_tag="T265_10271" /product="hypothetical protein" CDS complement(join(200012..200390,200994..201307, 205556..205877,208894..209252,210646..210883, 211063..211240,212492..212662,212726..212896, 213571..213795,216427..216672,217337..217601, 217969..218217,220052..220276,220900..221022, 222375..222599,223220..223602,225879..226006, 226096..226345,229112..229322,229918..230073, 243332..243486,244660..244789,250049..250354, 253097..253278,254739..254912,256886..257897)) /locus_tag="T265_10271" /codon_start=1 /product="hypothetical protein" /protein_id="KER21399.1" /translation="MHRFFVVLGKNYRLFWRGWIQTLFVCILPILLSCTLIFLRNQST RKIVPSAIHWRDFHLDDLPLPPPKSADLWTLAYAPNTSLCNEIIATFAPGLSLVPLGF PSEDLLLDFIRTADPRVESTLGAVLFDESSHLLNMSYTIRLRNGVEWSTSSLYPKFAE GKPRTFERYGSPPDYYPSGFLSLQLAIDRSITRLLCGNDEPGAFVDVNLKRMPYPPYL DDGFIPVIQRQLAFVIVLGFMFPVLHAVRSVLTEKQRRIKETLKMLGVSNGTYWCSWF LAYLSLFMVVCVALTAVLCVNFSSNGPLLTSSNPFLIFMLLFIYAYSLLTFGFAVCSL FNSPHTGTAICCAVLIAICLPSAVLDEHYEELNLATKVICSFLPSVGMGFVCLLIGQF EGIGVGVQFSNLFTPANPGDNLSLHILWMVLLVQGKLFMLIALYVDAVWPGTYGVPKP WHFPFTCLCRRKPTVSITLDPDADNEPDLADITLGRHPLSGHSVVEQGDAVGKTEAEN TLPSETHISPDSCGPTPSTSACPRPCYDEDYIEAEPVGLPIGIALKRIRKVYRSKNTT TVAVSGLTMNVFQGQITVLLGHNGAGKTTTLSILTGLYPPTSGTAFVSGHDIRTDIEG VRQHLGFCPQHDVYFKTLTVEEHLQLVARLKGFHGRALDEQVTNILHQTHLTHKRHAY TVALSGGMRRRLSIGMALIGDSKVVILDEPTSGLDPEARRQVWAILQAQRAARTLLVT THYMDEADHLGDRIAIMSAGKLRCFGSPLFLKAKYGAGYLLTIMKSTDTESSYLLSQV QQHVKGAQIRSDQGDELKFLLPLEAVDTFSPLFSNLETNKAQLGIQSFGVSVTTMEEV FLRVSERDFQDKESAHPFSSCQSETGSTLTDFPTVSVHQAYGAFSDTDVQEFRHFGAA LFWQQLSALLTKRCIYMLRHPVVILSQFCIPFTLCLIALFIFRHLTTMTHSDDPCLAL SLAPYGSGLIVTFANEANDTSSDASASISEQMLWAYNSQFDTGQVRTRRMVPAQTYEE DLLAETGEAKVFEYRAKYIIGLVVQSSQHENNDTSSISLRGYFQGESFHSAPVALNAL SNAVLRLLSNRSSEHPANDTSSDASASISEQMLWAYNSQFDTSQVRTRRMVPAQTYEE DLLAETGEAKVFEYRAKYIIGLVVQSSQHENNDTSSISLRGYFQGESFHSAPVALNAL SNAVLRLLSNRSSEHPHVLVSRTHKQVERSQLFPVEPKFWCSLTDRKVRGSNPISASR LPLSRPGQAGSIPAWCPLCMAWQLGTERALQLNDFFEPELTFECPNMPVITKTPPRIS TFNQPLPRTVSEQAKRLNTTDGLLMTLIAGFPFVSNVLLALSYLAATFALPLIYEYTT NAKHLQFVSGVKLLPYWLSNYLLDMLTFLAVCASIVATFAIFNLEEFDTHSRLYLVAL LLLAFAWAILPQMYLLSRFFKSPTSGLVWITVYNEFSAAIGLLTVAILCHPAVHQQSL SYSLERVWIILSPTFSVSDGLFIVFDNYVFRRLCDSPEMEFFCHLTKSTMPCCLKTCK PFCAYWTVRELSFDRGAIGLNLYALIFQGLFFNILVLFLDSMAAQRLQLWVRSKTCKP FCAYWTVRELSFDRGAIGLNLYALIFQGLFFNILVLFLDSMAAQRLQLWVRSICARML SILLGCGKCAGTKRCSLASSNSELTTLALEDEDVRQHRHLIESMPLGRLTDQTSLVLR HVTKTYGPVIPGRQSHRKPAVDCLTLAVLPAECFGLLGVNGAGKTTAFRMLTGDLDPT EGDIFVNGFELKKDLRKAQQCMGYCPQFDALLPYLTGRETLQLYARLRGIPEGYVNVE VNQLLHDMRLSHHANVLVAHYSGGKRRKVSVAVALVGGTPIVCLDEPTTGVDPVSRRC VWNLLLRCRRQGRTLVLSSHSMEECEALCSRVSIVVNGRLKCLGTCQHLKSRFGRGYS LTMQVAPSFEHPTDSSNLSLVGGCMTDSTTISLTEELNLIRQNAMDEAVLSVTRFVDE HFPNARLVARHQGVLQYHLPMSLLEDLNLSGIFHLMESNKIRLGLINYSVSQTTLEQV FIDLAKLQEEHNENASSSDERYCTCFGYNLWRHPQRFLPSRCCHTLRIRTVEVPETES LCRHRGEELTNLCWLIPSLYRRDGPSGWSVNLLTGRSGVRSRSLPLDFPCLGLGNLAV SQPSCFLRVTWRLGTENVLQLNDCCIITNYDRTLVFFICNNNTQSAVTRFPCIVAKPS RRSMRVEMLP" assembly_gap 232468..242278 /estimated_length=9811 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 285505..285884 /estimated_length=380 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<294866..>299409) /locus_tag="T265_15102" mRNA complement(join(<294866..295186,299107..299191, 299228..>299409)) /locus_tag="T265_15102" /product="hypothetical protein" CDS complement(join(295148..295186,299107..299191, 299228..>299409)) /locus_tag="T265_15102" /codon_start=1 /product="hypothetical protein" /protein_id="KER21400.1" /translation="LVQKRKLCYSKEPWGESTINHYLRNSLDVEFDLFSKVHVNGHSA HPFFTFLKSKLRDSKFNFIKWNFTKFLIDRRGVPRKRYGSSTPPLDIEDDIVQLLEE" gene <315059..>319202 /locus_tag="T265_15103" mRNA join(<315059..315113,318964..319037,319047..>319202) /locus_tag="T265_15103" /product="hypothetical protein" CDS join(315059..315113,318964..319037,319047..>319202) /locus_tag="T265_15103" /artificial_location="low-quality sequence region" /codon_start=1 /product="hypothetical protein" /protein_id="KER21401.1" /translation="MCSLDVTSLFTNVPLTGTTSRNFVSFNTQKPASHLLFYCYIRKD CISLQCTTHKVAENPSTAHDRFRPSLGASGRHSPRVSVSLMFYLRQIQLGS" assembly_gap 329385..332925 /estimated_length=3541 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 335160..336164 /estimated_length=1005 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <336304..>355501 /locus_tag="T265_10272" mRNA join(<336304..336563,337291..337446,344432..345044, 345096..345212,346496..346927,350020..350166, 355132..>355501) /locus_tag="T265_10272" /product="hypothetical protein" CDS join(336304..336563,337291..337446,344432..345044, 345096..345212,346496..346927,350020..350166, 355132..355269) /locus_tag="T265_10272" /codon_start=1 /product="hypothetical protein" /protein_id="KER21402.1" /translation="MDFQTLHGAYVRALLEYANHVVYSGRTKDVTLIERVQRAATRMV AGLKSVDYEARLAMLYLFPLEYRRLRGELILTYALFERSLANSGAPRGNWYSSAGVVG ALACPMMEQCQAERNLHLARRQQCACLIQELGSRLQTTQVVINAGIYYMHHFYEVFSP ETIKPILVAIAAFYCACKTEDFSRKLAFLIKATYEILKRPVPNEASDTFKRLVQNIHA LEATILMVIGFQTLEVKQPHVLLINAIRANKFPKEISHTSYYICTNILHLTTLILRHS AEAIAAASLYIAAKWNSSDIQSPNGEWYHIFSPNLTFDEISKITEEFTLAFQACDLKI KEQLRTTLRSRKLQREQKEQPVVDMRNQELQKKPLADTTQPAKPDSWKMLASFFSFQR LFNFSTVQAEKRPYNQPAGQNLPQSAPHHQTSMQHHQSRSHQSLASQSGCGPGGGQNY PYHAHHRPPPSSHQPQPHGGHVGGAGDHFNRSHLNRPQSSNVMMEPDSKRARFDRSYS TSGRHSPVAAHHAEGSNRTHRYDGAPSHFPASDSMARHGAPSSSIPPGRPHDYRVPQA PGYSAIPNKPSGRDEPRSAPRPSAGPGRVANKPGAHPQNASRPMNVKHDFNDYF" assembly_gap 341520..344005 /estimated_length=2486 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 364194..364882 /estimated_length=689 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 366580..370782 /estimated_length=4203 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <376625..>387888 /locus_tag="T265_10273" mRNA join(<376625..376889,376930..377096,377354..377597, 378775..378941,381191..381388,383379..383507, 387550..>387888) /locus_tag="T265_10273" /product="hypothetical protein" CDS join(376625..376889,376930..377096,377354..377597, 378775..378776) /locus_tag="T265_10273" /codon_start=1 /product="hypothetical protein" /protein_id="KER21403.1" /translation="MLEEAIYSQGFEGYPGTLLRQDGIDFSNVSTLRLDYRSMPVNNA IKVVLDILKIDHLWRFDKLVKLQLDNNIIEKIEGIDHLVHLRWLDLSFNNIKAITGLE KLVNLEDLSLYSNRIQSLENLDTLRKLEVLSIGRNKLTDTEDKEQAYQTHQLLVDELT AKEMNEQELEKQKMEMDSQKAMHRRAFVTGLDNDRIFEVLFQDDPEGKEMLQISEFGH SIKAYPF" gene complement(<389359..>418213) /locus_tag="T265_10274" mRNA complement(join(<389359..390874,392402..392513, 397023..397196,398070..398492,400900..401284, 402072..402562,418094..>418213)) /locus_tag="T265_10274" /product="hypothetical protein" CDS complement(join(390043..390874,392402..392513, 397023..397196,398070..398492,400900..401284, 402072..402562,418094..418193)) /locus_tag="T265_10274" /codon_start=1 /product="hypothetical protein" /protein_id="KER21404.1" /translation="MTSRLGGDGRVAVPVRAKRHSLHLDGSGKKRRKVDTVSGCRSPL VHASTVQMKQPLVPPVSFSVPGLPLLFGVGDTGQLGLGPDITERSRPCRFSKASLTAL GISDQDLESLTTQICAGGMHTVCLTGAGRVITCGCNDEGALGRNVLSDSELQPPTKKP HIDGKESGHQNSDVTDLLAEETYPAYVPLPPSVKICMVSAGDSHTAALDSEGQVWLWG TFRGASGPIGLTEAGEISQTPKRLFPPISTAPATDRAPGGEGKPIPSSAVSSLHMGMG ARVVKIASGQDHLVCLTDEGRLYTMGCGEQGQLGRIAERFARTGGRHGMNALLNPAEC RVRGAVRFSDAWAGGFATFARCQATGTIYACGLNNYGQLGLKKPSAVVNGDADENDEA TIDGGLGEEGDEMDVDAARLITDQKEVDKSEAALLARQGPLIQFMLTKAHGFSRDRNW RQFAVGMHHTLALDGLGHVYAVGRPDYGRLGLGKPTAVSHLSVPQPSRVQGLLSDRTC SWVGCGEACSFAVDTSGIAYSWGMGSNKQLGHGDDDDEDCYEPGVIKGKQLENRFVSI IDAGGQHTVLLAHSSLPSNGMPLANATSLSNDINSGNGYDLSNEASYMSSALKNPSSE NISSNTTIPHPASDNKFADLSGIAPVLAPAHPRRNRHLSPSSVTGYAPVTFLGRGADS TTCSTAGATINSSVHSSAVSDTSSVGSCASNTSTSSQLNSAKSTDGGGSSRCSSFGTY SIQSSLPVGPPAEDVPGVSANSGSLMLDPLSASLLATSRTLTQTNRASAAGCRSTQIR SAGMSICSTSSEAGILTDTISLGSMTASPADLISGEQSSS" assembly_gap 427357..427644 /estimated_length=288 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 428348..428527 /estimated_length=180 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <441348..>451859 /locus_tag="T265_10275" mRNA join(<441348..441694,442257..442364,447288..447599, 451107..>451859) /locus_tag="T265_10275" /product="hypothetical protein" CDS join(441416..441694,442257..442364,447288..447599, 451107..451505) /locus_tag="T265_10275" /codon_start=1 /product="hypothetical protein" /protein_id="KER21405.1" /translation="METKDGAPSPKAVDCTDPPGARDLLNTSPEHSVGPRVAMVPRES ADRAEHTNDENKLDTYEIDELEIPDCDSEDIDLEHCRIKSINHLHRFPNVKRLCLRNN LLKKLENFDPVASNLTELDVYDNQITTIENLDCLSLLISLDLSFNRIKHITNLSSLVN LKKLFLVNNRIGKIENLDGLIQLDMLELGSNKIRRLENIDHLVNLNQLYLGKNKITAL ENLDTLVNLTLLSIQGNRITKICGLDRLVNLEQLYLSENGIQQIEGLDNLRKLQILDL AYNFISQIENIGHLDQLEEFWFNDNKVSSWDQIDKLTALGNLRTLYMERNPIYFTTAD RSKQDPNYRRKIMLTLPNLRQLDANLTGVGL" assembly_gap 456772..459306 /estimated_length=2535 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 464889..464929 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 469916..471766 /estimated_length=1851 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<480002..>485793) /locus_tag="T265_10276" mRNA complement(join(<480002..480266,480855..481015, 483884..483999,484043..484111,485722..>485793)) /locus_tag="T265_10276" /product="hypothetical protein" CDS complement(join(480002..480266,480855..481015, 483884..483999,484043..484111,485722..485773)) /locus_tag="T265_10276" /codon_start=1 /product="hypothetical protein" /protein_id="KER21406.1" /translation="MHQRNYPGSASLFHDLGKKMMVCLHGGRVYFGFLRIIDQFGNVV LHQAFERIHVDKKFCDIPQGILMIRGENIILIGEVDENCNIEEQLELVSEKEIYALQA ERTAARKALSKRRAQLFAARGLGLPDPSDLLCNTLPVSSCHATRGTHEGWDTARLPKP RQGNSRGRDQRPPVSKFALQPLDHPVPLSHLALKDSANRIKFKKSETTGGLSKSCRQT YM" assembly_gap 487344..493161 /estimated_length=5818 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 494412..495548 /estimated_length=1137 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 503280..504027 /estimated_length=748 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<522251..>522619) /locus_tag="T265_10277" mRNA complement(<522251..>522619) /locus_tag="T265_10277" /product="hypothetical protein" CDS complement(522251..522619) /locus_tag="T265_10277" /codon_start=1 /product="hypothetical protein" /protein_id="KER21407.1" /translation="MAPKVVSGKAAKKASKVKVPKVDKKKKRRRKESYAIYIYKVLRQ VHPDTGISSKAMSIMNSFVNDIFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGE LAKHAVSEGTKAVTKYTSTK" assembly_gap 525032..525268 /estimated_length=237 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(JACJ01022166.1:1..8860,gap(3249),JACJ01022167.1:1..3046, gap(9637),JACJ01022168.1:1..2292,gap(2297),JACJ01022169.1:1..23327, gap(545),JACJ01022170.1:1..5751,gap(1085),JACJ01022171.1:1..6573, gap(1178),JACJ01022172.1:1..18840,gap(41),JACJ01022173.1:1..15461, gap(1848),JACJ01022174.1:1..9873,gap(3397),JACJ01022175.1:1..3006, gap(541),JACJ01022176.1:1..13380,gap(425),JACJ01022177.1:1..1791, gap(208),JACJ01022178.1:1..53938,gap(76),JACJ01022179.1:1..41802, gap(9811),JACJ01022180.1:1..43226,gap(380),JACJ01022181.1:1..43500, gap(3541),JACJ01022182.1:1..2234,gap(1005),JACJ01022183.1:1..5355, gap(2486),JACJ01022184.1:1..20188,gap(689),JACJ01022185.1:1..1697, gap(4203),JACJ01022186.1:1..56574,gap(288),JACJ01022187.1:1..703, gap(180),JACJ01022188.1:1..28244,gap(2535),JACJ01022189.1:1..5582, gap(41),JACJ01022190.1:1..4986,gap(1851),JACJ01022191.1:1..15577, gap(5818),JACJ01022192.1:1..1250,gap(1137),JACJ01022193.1:1..7731, gap(748),JACJ01022194.1:1..21004,gap(237),JACJ01022195.1:1..1533) //