LOCUS KL198101 154600 bp DNA linear CON 05-JUN-2014 DEFINITION Botryobasidium botryosum FD-172 SS1 unplaced genomic scaffold BOTBOscaffold_86, whole genome shotgun sequence. ACCESSION KL198101 AYEP01000000 VERSION KL198101.1 DBLINK BioProject: PRJNA69807 BioSample: SAMN00632712 KEYWORDS WGS. SOURCE Botryobasidium botryosum FD-172 SS1 ORGANISM Botryobasidium botryosum FD-172 SS1 Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Cantharellales; Botryobasidiaceae; Botryobasidium. REFERENCE 1 (bases 1 to 154600) AUTHORS Riley,R., Salamov,A.A., Brown,D.W., Nagy,L.G., Floudas,D., Held,B.W., Levasseur,A., Lombard,V., Morin,E., Otillar,R., Lindquist,E.A., Sun,H., LaButti,K.M., Schmutz,J., Jabbour,D., Luo,H., Baker,S.E., Pisabarro,A.G., Walton,J.D., Blanchette,R.A., Henrissat,B., Martin,F., Cullen,D., Hibbett,D.S. and Grigoriev,I.V. TITLE Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi JOURNAL Proc. Natl. Acad. Sci. U.S.A. 111 (27), 9923-9928 (2014) PUBMED 24958869 REFERENCE 2 (bases 1 to 154600) AUTHORS Riley,R., Salamov,A., Henrissat,B., Nagy,L., Brown,D., Held,B., Baker,S., Blanchette,R., Boussau,B., Doty,S.L., Fagnan,K., Floudas,D., Levasseur,A., Manning,G., Martin,F., Morin,E., Otillar,R., Pisabarro,A., Walton,J., Wolfe,K., Hibbett,D., Grigoriev,I., Nordberg,H.P., Cantor,M.N. and Hua,S.X. CONSRTM DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-SEP-2013) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://genome.jgi.doe.gov/Botbo1 JGI Project ID: 403719 The DNA was provided by Dimitrios Floudas (dfloudas@clarku.edu) The strain is available from Northern Research Station Laboratory Contacts: David Hibbett (dhibbett@clarku.edu) Assembly and annotation done by JGI. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Botryobasidium botryosum FD-172 SS1 GOLD Stamp ID :: Gt00066 ##Metadata-END## ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.5 Assembly Name :: Botbo1 Genome Coverage :: 31x Sequencing Technology :: 454; Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..154600 /organism="Botryobasidium botryosum FD-172 SS1" /mol_type="genomic DNA" /submitter_seqid="BOTBOscaffold_86" /strain="FD-172 SS1" /db_xref="taxon:930990" /chromosome="Unknown" gene <1273..>1952 /locus_tag="BOTBODRAFT_180406" mRNA join(<1273..1320,1380..>1952) /locus_tag="BOTBODRAFT_180406" /product="hypothetical protein" CDS join(1273..1320,1380..1952) /locus_tag="BOTBODRAFT_180406" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07729.1" /db_xref="JGIDB:Botbo1_180406" /translation="MSKLLQLLVHFDLLHAVQFYSPYVLTPNSPAGKILMNSRNTLRV LSLEEVVGWLNPSCSVWALDQSNLVWPHVHELYLCIVDLDLAENISPNLSHNFPSTFS FYLPLAMAGCHHDIHDACFVLRLESLQGKWTNIKFATDTGAMLRCAMVFLDNTDFMIP FELYLVPSLECLMLKPERYLLRKYLLKRLSAIMPKLAFLCLVRTSP" assembly_gap 5342..5597 /estimated_length=256 /gap_type="within scaffold" /linkage_evidence="unspecified" gene <5718..>7070 /locus_tag="BOTBODRAFT_180408" mRNA join(<5718..5912,5951..6317,6385..>7070) /locus_tag="BOTBODRAFT_180408" /product="hypothetical protein" CDS join(5718..5912,5951..6317,6385..7070) /locus_tag="BOTBODRAFT_180408" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07730.1" /db_xref="JGIDB:Botbo1_180408" /translation="MPSTHDGRLLHRRCHVTTAIFDIATINHHRPPCLADSTLVAPSS DLPGSQIPSPTSSLAHPSTHLTTYVALDGHPFFCPIHCDSCTCPGFRYIVDKNCPCAR CTTFATTPIATPTDIIAQRCRRLGPIDNLSYNDLQHLSEGDLFERLYPTHHASQENLP ELATLARINYEDALPTDPDNAASWLAFRDMDTSIIAPPSWRDIKTDIENTLSVHSEGA LPNIIALTVVASAYMIAEYHPRSEDIPEATVDSILEIFHYSITRSCILDELIDNPDFM SLLAARAPQLLPAPNTPPRPRSRTGQTGPPPSPLALAWPSPPLHTPWRPPPLSASPNH PPRRSLPSSQGRPTATAPTQTRPPSSLLTGFPSANRAPPLSSATTPSARPLDTRPASS LLPGPKPVTSSSPMVLRMHFYLE" assembly_gap 7401..9738 /estimated_length=2338 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 15794..16826 /locus_tag="BOTBODRAFT_593020" mRNA join(15794..15857,15914..15990,16059..16215,16283..16457, 16513..16826) /locus_tag="BOTBODRAFT_593020" /product="hypothetical protein" CDS join(15825..15857,15914..15990,16059..16215,16283..16457, 16513..16664) /locus_tag="BOTBODRAFT_593020" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07731.1" /db_xref="InterPro:IPR009305" /db_xref="JGIDB:Botbo1_593020" /translation="MAPQIFDVEHQLIFYGAYHSNKWNILIHIICVPIILWTAQIFVA SLPVPQAFPTIHHTFNQYLELEFNWTTVLSIVYQVYYLILEPGAALLYAPQMILSTLS ATSFAHRSGTMSTAVALHVVSWIAQFFGHGVAEGRAPALLDNLVGAIFLAPLFVHLEI LFALGYNPTLHKKMQNGVGKKIAQFRRDAKAAERRQQ" gene complement(16425..17605) /locus_tag="BOTBODRAFT_38528" mRNA complement(join(16425..16455,16511..17340,17409..17431, 17500..17605)) /locus_tag="BOTBODRAFT_38528" /product="hypothetical protein" CDS complement(join(16869..17340,17409..17431,17500..17553)) /locus_tag="BOTBODRAFT_38528" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07732.1" /db_xref="InterPro:IPR013640" /db_xref="JGIDB:Botbo1_38528" /translation="MASTSASPGTFANLYYQRAVATARPCYMCLRPTTIVLATINNTD FLYTCATHLTDPGFATPLPSETPKLSEEELKRIKEEWEQKQKRKNEAKKKQEEGKSQD ADKADKGDKEKGKASPPGGSAPVSPSPPPTSKPQHARFVLHREVFAMRQAEHRKKRQT SQIKEVAPRLPGAPRGYINPDM" gene 17526..19746 /locus_tag="BOTBODRAFT_38530" mRNA join(17526..17673,17728..17855,17932..18007,18066..18104, 18161..18191,18246..18299,18356..18435,18504..18657, 18731..18981,19049..19149,19220..19229,19290..19365, 19428..19516,19582..19746) /locus_tag="BOTBODRAFT_38530" /product="hypothetical protein" CDS join(17653..17673,17728..17855,17932..18007,18066..18104, 18161..18191,18246..18299,18356..18435,18504..18657, 18731..18981,19049..19149,19220..19229,19290..19365, 19428..19516,19582..19620) /locus_tag="BOTBODRAFT_38530" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07733.1" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="JGIDB:Botbo1_38530" /translation="MSTTQGKVITCKAAVAWAAKEPLVVEEIEVDPPKAGEVRIHILY TGICHTDEYTRSGNDPEGKFPAILGHEGAGIVESVGEGVTSVKPGDHVIPLYTAECRE CKFCKSGKTNLCGKVRATQGQGLMPDGTSRFRARGQTVYHFMGTSTFSQYTVVADVSV VKVNDSAPFEKICLLGCGIPTAWGAVTKMPGDGVAGSNVAVFGCGCIGLGVINTARTV GASRIIAVDINPNKEAVARSFGATEFVNSKEIAQSGKRIQDYLVEITDGGPDFTFDCT GNVDVMRAALEAAHKGWGVCTVIGVAPAGAEISTRPFQLVTGRTWRGSAFGGVKGRTE LPGLVDDYLAGKLEVDKYVTHSRALDEMNEGFHDLHTGDCIRCVVSMS" gene complement(19571..21744) /locus_tag="BOTBODRAFT_38532" mRNA complement(join(19571..20737,20936..21053,21103..21175, 21232..21295,21358..21371,21429..21485,21545..21577, 21641..21744)) /locus_tag="BOTBODRAFT_38532" /product="hypothetical protein" CDS complement(join(19809..20737,20936..21053,21103..21175, 21232..21295,21358..21371,21429..21485,21545..21577, 21641..21666)) /locus_tag="BOTBODRAFT_38532" /note="GO_function: GO:62 - acyl-CoA binding" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07734.1" /db_xref="InterPro:IPR000582" /db_xref="JGIDB:Botbo1_38532" /translation="MDAKTLADAQFDRAVEIVQGLPKTGPIQTGYEEKLAMYSLYKQA TVGNVKSARPGMWDMLGRAKWDAWAKHKDLDKQEAKWLYVETLLKVLRKYSDRTAARD LVKELEGYTAGLEGFTNIDPSSMVISEGTSDEDGDTSDADAEDEEEVHEIPRIPSALA RPRSALSSQHRYRTPLATTAIPNPSSSGVLPFPGPNPQLVPHTQPLPSFTTPSVFHNQ PSAALSPPYPPTHAPYPPHLAHSAELYPHPYNAPSSASITHAPIHRSSPSALERAVES VQASLAALHERLESLEHLNSPPPSAALSRANLHASHLHSHSHLSPHSSQRHLQRQLHE STEWDMSHMGAWALVLRPLARIARYLSALSAFLLSPSTPNRSPTLLIIRRLMLDASFI LFVLFWLRKAWLGAGMRRREVYQALTGVWWALVGRKERVMVSRGV" gene complement(<22156..>23667) /locus_tag="BOTBODRAFT_149029" mRNA complement(join(<22156..22514,22593..>23667)) /locus_tag="BOTBODRAFT_149029" /product="hypothetical protein" CDS complement(join(22156..22514,22593..23667)) /locus_tag="BOTBODRAFT_149029" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07735.1" /db_xref="JGIDB:Botbo1_149029" /translation="MSKLLQLLVDFGLLHAVFSHIHSHRDLLSLALTCRGLKEIIIPE FLFSHLRFEATLDTDLNNWGRFDYAYNSLYNVLSGDNTRYAEAIRSFETPSINKGWGD VLQRAEHLHTLALHWSDIIRQHHSYTSAHSKLRYLRIELCSAEDLDIVQDLSNLHGLS LNIHPAYALTPDSPLGKILTNSRGTLKALSLTGVAWRLHPSCSAQTLNEHDFVWPHVY ELYLRIINPAETIIPNLALACPSTRFFYLPSNRIEHTVHDIYDACFVSRLESLRGEWT DIKFATDAGATLRRAIVRLGDADSTIPFESYLVPSLESLTLKSERSIRQYPLKQLFAI TPKLTFLRLRFFATSFLSFAETFVQWILASVARLPLKYLHISCALFGANIFFAFGDVC TKISDARIEDYAKAFAARASASLPSFRAFSVQWSNGRSDWHRSIDEHGMARFCRVSMA DGMADEMWFDWGETKDYIPWNVGAKYE" gene complement(<25658..>26071) /locus_tag="BOTBODRAFT_80267" mRNA complement(<25658..>26071) /locus_tag="BOTBODRAFT_80267" /product="hypothetical protein" CDS complement(<25658..>26071) /locus_tag="BOTBODRAFT_80267" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07736.1" /db_xref="JGIDB:Botbo1_80267" /translation="GAAPDVDDLGLPTSPTWSVNQLLSSYPTPTLAPGTLVRLHELAA LVPPPDGSPEFSGLSRELGELIRLVEAVKLVHVDRGSGDDGIPDARLWQEGKGIDLFV GSKPKAGETKRHESNVVGHAEQSEDGYYVVETSRRK" gene 26288..26988 /locus_tag="BOTBODRAFT_166639" mRNA join(26288..26650,26711..26818,26874..26988) /locus_tag="BOTBODRAFT_166639" /product="hypothetical protein" CDS join(26425..26650,26711..26802) /locus_tag="BOTBODRAFT_166639" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07737.1" /db_xref="JGIDB:Botbo1_166639" /translation="MLPTSRLFSQSAGATKFAPTLYQVLAKLPENGVGARVTQRRWAA KGIEGSFWEVTRVRLKDEGKHGKVWGKLVWRGRPISERDELIRGGLKYQWEDVSSSMP SRQ" gene 28383..30544 /locus_tag="BOTBODRAFT_593121" mRNA join(28383..29118,29180..29251,29312..29462,29530..29580, 29637..29706,29777..29901,29974..30035,30098..30107, 30169..30195,30256..30544) /locus_tag="BOTBODRAFT_593121" /product="hypothetical protein" CDS join(28782..29118,29180..29251,29312..29462,29530..29580, 29637..29706,29777..29901,29974..30035,30098..30107, 30169..30195,30256..30337) /locus_tag="BOTBODRAFT_593121" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07738.1" /db_xref="InterPro:IPR008754" /db_xref="JGIDB:Botbo1_593121" /translation="MSWRSSCPSLRLRRLLLYFPPRPSTRRTSNDLSSAHKNIMRSLA IVAVLSGALAVLAAPSGPVVDICGTHVDPTEASALEAKFAASKKTIASRAPFPGVVIP VYWHVINAGPDVSDGNIRDCEIVANINVMNNDYAGSGIQFSIKNITRTTNAKWFHSVD QGTTYETAMKRTLRVGGADTLNIYTVAFDEIENPGLLGYATFPMYYEDAPQDDGVVIS HLTLPGGALPRYNGGRTLTHETGHWLGLYHTFQGGCDGPGDFVDDTPAEASAFSGCMK GRDSCPQDPGLDPISNYMDYSDDACMNQFTPGQWDRIAAAMSLFRGAGATDS" gene complement(30556..31914) /locus_tag="BOTBODRAFT_38535" mRNA complement(join(30556..30869,30928..31134,31199..31261, 31322..31914)) /locus_tag="BOTBODRAFT_38535" /product="hypothetical protein" CDS complement(join(30786..30869,30928..31134,31199..31261, 31322..31498)) /locus_tag="BOTBODRAFT_38535" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07739.1" /db_xref="JGIDB:Botbo1_38535" /translation="MVRINAALYAISCLVLSAASSPIKRDVSQIKADITKVSQQTVDL DNAITAFTGNLNDALAINTKSQTLTSTVKAATSDVQNADDFSEDDGKAIGTAIDALVP QIESSLTHLVQKKSTFPSFAISTVQSDLQALSDSNTDFSNALASKVPDDEKDAATAFQ SQIEDAFKNAIAQYAS" gene complement(32772..34147) /locus_tag="BOTBODRAFT_192202" mRNA complement(join(32772..33102,33172..33347,33403..33467, 33522..33605,33665..34147)) /locus_tag="BOTBODRAFT_192202" /product="hypothetical protein" CDS complement(join(32914..33102,33172..33347,33403..33467, 33522..33605,33665..33741)) /locus_tag="BOTBODRAFT_192202" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07740.1" /db_xref="InterPro:IPR012312" /db_xref="JGIDB:Botbo1_192202" /translation="MSTTSNLDVTQEIKLDHDNVRDLWTRFQAASARDEKSAIANTLI REMAIHSDAEEISVYNDYERLGLSGTAEQNKEEHAEVKKLVYEADSASTKSADYDSIL GKAVQAFLAHAQEEEDEQHNILRAHLTPEENDKIARAFLKARKKVPSRPHPSAPQTGQ AAQKAAGMFGSVHDKIIETIGGRDFVELKYNHPESV" gene <34749..>36270 /locus_tag="BOTBODRAFT_192203" mRNA join(<34749..35036,35099..35206,35264..35401,35456..35552, 35608..35627,35677..35776,35852..35917,35980..35995, 36070..36094,36148..>36270) /locus_tag="BOTBODRAFT_192203" /product="hypothetical protein" CDS join(34749..35036,35099..35206,35264..35401,35456..35552, 35608..35627,35677..35776,35852..35917,35980..35995, 36070..36094,36148..36270) /locus_tag="BOTBODRAFT_192203" /note="GO_component: GO:16020 - membrane; GO_function: GO:5215 - transporter activity; GO_process: GO:6810 - transport" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07741.1" /db_xref="InterPro:IPR000425" /db_xref="JGIDB:Botbo1_192203" /translation="MKLEVEPEHVIFLAPFFSLKSPANEAEDTYRNINMKNLEDYTLD RTFEHTPPVRDRALLPRGLNLLRNIWDLRTTYWAEFLSTLITTVACIAGGCQAGLLGE DEKSSSSSAIFGVTLGFVFGSHTGGFGNPILTVAMTLARRISPRKAGTYMAMQFAGAL VGATAAYMYYSPAVDEFEGGRGIRTASGSAKFFLSVYIPDALPSGYIDSLAFHIIAQN LLVLGQSFYIPVDFCYYFIIMPFLFTHYAMSNHVNPARDLASCIVLHIAGYGSQVWTQ GSMLYWPITVITTTITAIFGVREGVSLDQEVKRAEEEDLRSQLETGALRV" gene complement(36438..38051) /locus_tag="BOTBODRAFT_38538" mRNA complement(join(36438..36550,36604..36636,36698..37024, 37090..37336,37397..37534,37589..37972,38025..38051)) /locus_tag="BOTBODRAFT_38538" /product="glycoside hydrolase family 105 protein" CDS complement(join(36464..36550,36604..36636,36698..37024, 37090..37336,37397..37534,37589..37941)) /locus_tag="BOTBODRAFT_38538" /codon_start=1 /product="glycoside hydrolase family 105 protein" /protein_id="KDQ07742.1" /db_xref="InterPro:IPR010905" /db_xref="JGIDB:Botbo1_38538" /translation="MHLFTSSAALVLVSLVLGANGAAPPQSTSYATLLASSAISRGQG NGLSSSGAPVDSYEHGTFQRALTRLYEKTGDKKYLDYIKKGIDALVGSDGSVKAYSLT EYTLDNIKIGDSMVQLAKLTGEAKYKTAATKLRSQLATHPRTPSGGFWHKNIYPNQMW GDGQYMALPFYAAYTSAYQPTNTTAWDDMALQLKLYDSHSLQKSTGLLYHGYDELKKA VWANSVTGASPEVWDRAVGWYSMALVDLLEYWPTSHPGRATVLSLYRSLVPALVAAAD PTTHAWWLVMSQPGRAQNYIESSGSAMFVYSILRGLRLGYITDVNGQYKNAAVAAYKY LLNTFVVSASGGLADFKGTVSVGSLSGAGDYSYYVSQTIVTNDLKGVAAFVLASVEYE SL" gene 39475..41026 /locus_tag="BOTBODRAFT_38539" mRNA join(39475..39773,39835..39906,39967..40117,40169..40219, 40279..40348,40407..40531,40591..40649,40713..40722, 40794..40820,40894..41026) /locus_tag="BOTBODRAFT_38539" /product="hypothetical protein" CDS join(39551..39773,39835..39906,39967..40117,40169..40219, 40279..40348,40407..40531,40591..40649,40713..40722, 40794..40820,40894..40963) /locus_tag="BOTBODRAFT_38539" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07743.1" /db_xref="InterPro:IPR008754" /db_xref="JGIDB:Botbo1_38539" /translation="MRLSILLAPLSVSAIAISVPQKDYLSSRRCGASITPYEIAAAEA AFSAASAQLKVSEVFNATIPIYWHVICAGDAISEGNISDSQIEANLDVINKDYSASGV RYALEGITRTANASWFANAGPQTSLQADMKKELRQGGANALNIYTVGFRNGPSRGLLG YSTFPSAYQGAPQDDGVVILYSTVPGGDLPKFNLGKTLTHEVGHWVGLYHTFEGGCLE PGDYVDDTPPEALPSFGCPASKHTCTSPGMDLVHNFMDYADDDCMSEFTSGQIARMVS QISTYRLGP" gene <41787..>42975 /locus_tag="BOTBODRAFT_119606" mRNA join(<41787..41835,41899..41970,42036..42186,42253..42373, 42432..42556,42612..42683,42813..42854,42912..>42975) /locus_tag="BOTBODRAFT_119606" /product="hypothetical protein" CDS join(41787..41835,41899..41970,42036..42186,42253..42373, 42432..42556,42612..42683,42813..42854,42912..42975) /locus_tag="BOTBODRAFT_119606" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07744.1" /db_xref="InterPro:IPR008754" /db_xref="JGIDB:Botbo1_119606" /translation="MNTTIQVYWHVITANGTVAGGNVSDSQIASNIDVVNKDYARSGI SWKLAGTTRTQNSAWFNNVAPDDFEQTDMKTKLRKGDAKTLNVYTVGFTTGSAKGLLG YSTFPMSYKDAPLDDGVVILFSSLPGGSTSGFNLGKTLTHEVGHWVGLYHTFEGGCNT PGDYVDDTPYEASPASGCPTGRDTCTGTNGEGVDPSALLSSSMDYSVDSCMTEFTAGQ LARMNAQVSQYRF" gene <43787..>44133 /locus_tag="BOTBODRAFT_73079" mRNA join(<43787..43810,43879..43985,44073..>44133) /locus_tag="BOTBODRAFT_73079" /product="hypothetical protein" CDS join(<43787..43810,43879..43985,44073..>44133) /locus_tag="BOTBODRAFT_73079" /note="GO_component: GO:5634 - nucleus; GO_function: GO:3700; zinc ion binding - transcription factor activity [PMID 8270]; GO_process: GO:6355 - regulation of transcription, DNA-dependent" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07745.1" /db_xref="InterPro:IPR001138" /db_xref="JGIDB:Botbo1_73079" /translation="QFRSRITVCKRLKLKCDRRTPCGSCIKRDTVARCQYSPAAAEKI DVQSLHNRLLQLEGMVTQLS" gene <44755..>45483 /locus_tag="BOTBODRAFT_119559" mRNA join(<44755..44945,45007..45168,45222..>45483) /locus_tag="BOTBODRAFT_119559" /product="hypothetical protein" CDS join(44755..44945,45007..45168,45222..>45483) /locus_tag="BOTBODRAFT_119559" /note="GO_component: GO:5634 - nucleus; GO_function: GO:3677; zinc ion binding - DNA binding [PMID 8270]; GO_process: GO:6350 - transcription" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07746.1" /db_xref="InterPro:IPR007219" /db_xref="JGIDB:Botbo1_119559" /translation="MQCLYLLHDGKPRLSHTLYPTLGKLVNVARVMGLNVDPDEHNKH SLFDAEMRRRAWWDLYYYDLFISDLLGQDPTIHDASHTTRLPADVDEDNFNPSSSVLP PPREYSNFAYFAQKCKLAQLIKSMKKRTFREAGSSEPSLEAAMAFETEIATWLSELPA TFKYKSEGSADLLNSPHALIAQRCELVTLANALVLKLYTPFLKKS" gene 47294..51293 /locus_tag="BOTBODRAFT_192208" mRNA join(47294..47657,47722..47813,47870..48019,48075..48167, 48230..48400,48464..48575,48631..48746,48810..48907, 48970..49165,49231..49491,49547..49643,49714..49868, 49927..49958,50020..50176,50246..50264,50329..50460, 50523..50661,50718..50913,50981..51293) /locus_tag="BOTBODRAFT_192208" /product="hypothetical protein" CDS join(47405..47657,47722..47813,47870..48019,48075..48167, 48230..48400,48464..48575,48631..48746,48810..48907, 48970..49165,49231..49491,49547..49643,49714..49868, 49927..49958,50020..50176,50246..50264,50329..50460, 50523..50661,50718..50913,50981..51067) /locus_tag="BOTBODRAFT_192208" /note="GO_function: GO:8236; serine-type endopeptidase activity - serine-type peptidase activity [PMID 4252]; GO_process: GO:6508 - proteolysis" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07747.1" /db_xref="InterPro:IPR001375" /db_xref="InterPro:IPR004106" /db_xref="JGIDB:Botbo1_192208" /translation="MAIPRVFLASLARSSARPPPSLAFTRAMSSFASNKPRWTPNNYP AAPRLDHFDTYKSASRGEVKVHDPYRWLEEPGKQTDDWVTAQVEHTNAYLHKNQDRDR LRSEVRQNWDYAKFSSPSLKRDNRWYWYYNSGLKAQSIVYRSTTSELPNFEKEDGPGG EVFFDPNLLSNDGTAALATTAFSHSGEYFAYGVSLSGSDFFTIYVRPTSAPFPHPEHD GTNTLDQDGRLPDEIRYVKFSGITWTHDSKGFFYQRYPTRVEHGDATEDKAGTETLED KHAMLYYHRIGTPQSEDVLVIQDEENPTYMWSTGISEEDGRYLELYISKDTSRTNQLW VTDLTQNEIGPNMKWDKLVDEFESEYNVVANDGPKFYLYTNKDAPKYRVVTLDTSLPA GERKLVDFIPEDSDALLSGISPVNERNFVVVYSRNVKDELHIYSPTGKHLKRILQDHV GSISVTAKRKQSWFFVQYSGFTNPGVVGKYEFAASEKYDGAGEWNVLRAVKLKGLVPD EFVAEQVWYESKDGTKVPMFIVRHKSVKQDGTAPAIQYGYGGFSISINPSFSPSILTF IKAYGAVYAVPNIRGGAEFGEEWHLAGTREKKINVFDDFIAATQYLVKHKYVAPGKVA INGASNGGLLIAACIHRAPEGTFGAAVAEVGVMDMLRFTKFTIGKAWTSDYGNPEDPT DFDFIYPYSPVHNVPKDKKLPPTILLTADHDDRVVPLHSFKYAAALQHDAAGNPDPLL IRVDKKSGHGSGKSTEKRIEEATDKWGFVAQSMGLTWKDEAPASTDTVNATSEAPVAE KQEGALSEAQAKETKESVPKPETPTYFQRVLSLLYSVIGYFLPKAAAAPAGGR" gene complement(53885..53956) /locus_tag="BOTBODRAFT_t145" tRNA complement(53885..53956) /locus_tag="BOTBODRAFT_t145" /product="tRNA-Met" /note="Anticodon: CAT" /anticodon=(pos:complement(53922..53924),aa:Met,seq:cat) gene <54133..>55016 /locus_tag="BOTBODRAFT_119623" mRNA join(<54133..54204,54258..54367,54427..54587,54646..54801, 54862..>55016) /locus_tag="BOTBODRAFT_119623" /product="hypothetical protein" CDS join(54133..54204,54258..54367,54427..54587,54646..54801, 54862..55016) /locus_tag="BOTBODRAFT_119623" /note="GO_component: GO:16021 - integral to membrane; GO_process: GO:16192 - vesicle-mediated transport" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07748.1" /db_xref="InterPro:IPR001388" /db_xref="JGIDB:Botbo1_119623" /translation="MVRSTTIARASDALPLAASVDDEQTDQQLQEHKQQAKLIFRRIT PNSEPRCSIESGAYTLHYLISDNVVYLTIAEKSYPRKLAFSYLDELSKEFATSYGPKV DDIRKPYAFVGFDTFMSKTARLYQDTRGAASESNMDRLQGDLQDVTRIMTKNMEELLW RGDSLDRMSHLSTSLRSESEKYRKAARKINFDALLRKWAPVGGIAFFFLIIIWWKFF" gene 55193..56401 /locus_tag="BOTBODRAFT_593322" mRNA join(55193..55550,55620..55708,55767..55898,55954..55989, 56055..56101,56163..56401) /locus_tag="BOTBODRAFT_593322" /product="hypothetical protein" CDS join(55374..55550,55620..55708,55767..55898,55954..55989, 56055..56101,56163..56317) /locus_tag="BOTBODRAFT_593322" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07749.1" /db_xref="JGIDB:Botbo1_593322" /translation="MSSTSTITETATAVKDGAQETVDNLVDKDVDSIDTEARYMAYAS RLRTALRAGSRYIAYTSDVGEAFRPVVSPHLVTAAYGISWIYLIGDVSYESYKAHKLG PSPLEAANFSESTRVGMVAVKRGVFQSIASMALPAFTIHSVVKQATKGFANVKSPKVK AWGPTLTGLAVVPVLPYLFDHPVERVTDAAFEWIQKKMIEQNELKAAGKEL" gene complement(<56486..>58061) /locus_tag="BOTBODRAFT_119644" mRNA complement(join(<56486..56664,56728..57086,57145..57272, 57336..57518,57579..>58061)) /locus_tag="BOTBODRAFT_119644" /product="hypothetical protein" CDS complement(join(56486..56664,56728..57086,57145..57272, 57336..57518,57579..58061)) /locus_tag="BOTBODRAFT_119644" /note="GO_process: GO:44237 - cellular metabolic process" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07750.1" /db_xref="InterPro:IPR000649" /db_xref="JGIDB:Botbo1_119644" /translation="MADKATRAPTKAEPKQKGPPPTAVPPPKPKLSKAERRELQEKQR AAKSEAAAAGPSTKPGPAKQKPQKPSADAPPFSVAASQQGAAAPSRRRSFSSSTGPGA AHDIRSLHIFSHFGLPKSSSHGIKGDIHPAIVRLALQFSEFKIVGANARCIATLTAFK TLIQEYQTPPQITLSRHLMTYLSPQISYLVSAGRPMSVSMGNAIRHLKYEISILDIDM PEQDAKNFLCERINHFIRDRIVVADQVIQQLCLEKIHNGDIVLTYARSSVVEKALLEA HQAHISFSVIVVDSLPLGEAKHLLHTLTSAGIPTTYITLPALPSILSSVTTVLLGAHA LHSNGALFSRAGTALVAMMARSRGVPVLVCCETYKFSDGVSLDSFTKNELAPAPKKSP NSTNPPNLHVLSPLYDLTPPSNITAVVTEVGLIPPSSVPMVISGRGLNQGA" gene 61783..62721 /locus_tag="BOTBODRAFT_593400" mRNA 61783..62721 /locus_tag="BOTBODRAFT_593400" /product="hypothetical protein" CDS 61937..62677 /locus_tag="BOTBODRAFT_593400" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07751.1" /db_xref="JGIDB:Botbo1_593400" /translation="MPDLHDDRSLSALYFFPQQTRPHRSVLLPGVRRARRVLSQSDYE FVRRGGERGRGRGGGGGNYSSPGSGRGGPGRDSYRGSPSFSGNSGGYGRDQGYSNGYG GNQNSGGYPPSHANRGGYQGGGYSGRQEQYSYGAPPPYGGSRGGGYQGRGGGHSYSYN ANSGGSGNWGGGGGYGDGRGGGGYGGGRGGAGGYNDGRGGGAGGYGGYGGGPGGGPQG GYQGGGQYGYQQGGYQAPGRGRGRGGRY" gene complement(<63835..>67458) /locus_tag="BOTBODRAFT_119605" mRNA complement(join(<63835..63978,64040..64151,64210..64361, 64414..64576,64629..64757,64809..64945,65006..65162, 65228..65365,65428..65475,65526..65611,65670..65795, 65849..65902,65960..66142,66207..66321,66384..66659, 66722..66889,66974..>67458)) /locus_tag="BOTBODRAFT_119605" /product="hypothetical protein" CDS complement(join(63835..63978,64040..64151,64210..64361, 64414..64576,64629..64757,64809..64945,65006..65162, 65228..65365,65428..65475,65526..65611,65670..65795, 65849..65902,65960..66142,66207..66321,66384..66659, 66722..66889,66974..67458)) /locus_tag="BOTBODRAFT_119605" /note="GO_component: GO:5622; DNA replication factor C complex - intracellular [PMID 5663]; GO_function: GO:5524; DNA clamp loader activity - ATP binding [PMID 3689]; GO_process: GO:6260 - DNA replication" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07752.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR013725" /db_xref="JGIDB:Botbo1_119605" /translation="MDVDTPAQPPKRKKRVIIAASTDDEDEGPPKKKQGTAVVTKPGA KPQPRASETKRATKAPAVKRKSKSHKEDDDFVADSPEDDRDDGFMDDEVEKKSPKKSK SQPEPKSRASKTKAKGMPRRKPPVKQDRDDDFIDDDDDEPSKSTKAKPRASASKTKAD DHWAAIKAAKLAGPSAPGSKAVPDGQPNCLAGLAFVFTGELSSFSREEAIDLAKRFGG RVTGQPSSKTSYVVVGDNAGPSKLAAIKKIGVATLDEDGFLNLIATREGKLDEKAKEK LAKEEKKIREAARELEKAEKKADKEAKSSGGTRPVDSSEQLWTTKYAPKSLKEICGNK TQVEKLQSWLHDWFSSYKSGFKKPGKHGCNIFRAVLITGPPGIGKTTSAHLCAQAEGY TPIELNASDARSKKLVESSTNINNTSLDGWMSGGKSTTIAGMEITNKTCLIMDEVDGM SAGDRGGVGALNALIKKTKIPIICIANDRTAIKLKPLIATTFNMTFRKPEATNIRSRI MTIAFKENMKIPPNVVDQLVIGAQSDIRQVLNMLSTWKLSNDTMDFDEGKELAKMNEK YSVMTPWNIMGKLLGPYLFSATSRETLNDKMELYFHDHAFVPLFVQENYAKTTPSRAN SLNGPEQILRQLQLLDKAASAISDGDLVDAMIHGTQQHWSLMPLHAITSTVRPASFIY GSSAGGYGGGHGGPISFPSWLGQNSKQTKLRRQLGDVQIRMRLKVSGDKAEIRQNYIP ALFPRIVQPLIGDGQSAVPDVIEIMDEYYLSKEDWDTIVELGVDDHNDDMVMKKIATA TKSAFTRKYNASEHPIPFHKALDIFGKPSKKIAVDGVPDHEDVLEALDAPEEDEEEDR RQAESTTDAIGKDKLIRESKAKGGKGKAKGKAKE" gene complement(68122..70865) /locus_tag="BOTBODRAFT_38548" mRNA complement(join(68122..68597,68653..68743,68806..69091, 69145..69287,69351..69475,69528..69590,69649..69717, 69787..69930,69984..70035,70099..70215,70277..70371, 70425..70461,70521..70865)) /locus_tag="BOTBODRAFT_38548" /product="hypothetical protein" CDS complement(join(68225..68597,68653..68743,68806..69091, 69145..69287,69351..69475,69528..69590,69649..69717, 69787..69930,69984..70035,70099..70215,70277..70371, 70425..70461,70521..70713)) /locus_tag="BOTBODRAFT_38548" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07753.1" /db_xref="InterPro:IPR006674" /db_xref="JGIDB:Botbo1_38548" /translation="MTPRGLLARANHDVAPRAYTLPLPSAPSPSSTAMSDGDSRSSPL SLEGDSDYFPRLFLDPVHEYISVDPLTSAIIDTPQFQRLRYLAQLGTSYFVFPGASHN RFEHCLGVYHLAGKMVESLRDKQPSLGITDRDVQCVRLAGLCHDLGHGPFSHVFDNQF IPRVRPDIKWSHEEASVMMLDALVQENDIPIEKDWVNFIKDLILGEPQYTVSHDPPEK PYLFEIVANKKNSIDVDKFDYIARDTMNCGNRTSSEATRLIHSSRVINNEVVYGWKEW YTVHSLFNTRYSLHKRIYNHPVAKGIEYMVVDVLALADPILKISEKIYQPSKYLHLTD SILEEIERSELPELEQARAIIRRLRKRDLYKMVDQKVLPREYRALWKDDLTAERIAEV SKTLPGSEVGGGMTLCVDDVIVDFTGLHFGMKEKNPLDYVRFYEKRKPNEAHSARPDE ASHLIPAEFEEVTIRCYTRNPQKFGLAQAAFRKVVETLPETPPSPPDTAIGDPQTPPS LASPRAKPHSHSPLGNGVPSGTKTRSLRRSSSGTLFSATQSNQFTTVPPGYQHHSPSP LVAPQASLKRARGGDESPTRRGSPPKRRR" gene 70944..71401 /locus_tag="BOTBODRAFT_593587" mRNA join(70944..71034,71104..71165,71237..71401) /locus_tag="BOTBODRAFT_593587" /product="hypothetical protein" CDS join(71150..71165,71237..71388) /locus_tag="BOTBODRAFT_593587" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07754.1" /db_xref="JGIDB:Botbo1_593587" /translation="MIPCAFCRMIVCSAKTVVGGTWVHLLQMAMLRRRRVCWSRLRAS TSMMKRSTHRL" gene <72451..>74889 /locus_tag="BOTBODRAFT_48603" mRNA join(<72451..72744,72800..73152,73215..73338,73395..74348, 74410..>74889) /locus_tag="BOTBODRAFT_48603" /product="hypothetical protein" CDS join(72451..72744,72800..73152,73215..73338,73395..74348, 74410..74889) /locus_tag="BOTBODRAFT_48603" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07755.1" /db_xref="JGIDB:Botbo1_48603" /translation="MAGYAPSYGVPFPSSAQPVYGSPSSRDRDHHPIPMHAGYPGPQY TPQQVPVAFPSRSSPDFSPSPGSPSQPPPVPGTRAYYARPTPDGRVEYTPVVAEATQV RTPQGVMQSVQWVQDSSSKSRSKHRSSRSPTVGPAGMPGMPGMGMPPGPSISGVPPMH GPPQGMSGLAGMPLTTPYPPRPTTAPTTPGFAYDMHRYGDMLYNKGGDRDDGMRDWAK ENKQQQKEMERQAKARRKEEKEAAKRMQRWEKEQRERERAEEKERKRAHQDRDRILSR SNSVANFGQYGGRERRISGNVNGAFDRERRPSLGASAAPGPGFDRERRISGRDLHAKL QAMGFGPNDRERAISGGFGGARSRRVSMSEERPTGERSRRVSGVSSYERPSFYPGAGG GAPPGPPRPNYPPAGAYDKGGSMYGDRGYGHPGDRSYPPSPNQVPMAPGSSAGPPGYG PGSEYGRSPAAFRHGNSPQPGPGSAYGGDGYASSRSGVPRGAYSESGAPHPAAYSESG SYSMRGRGSPPSFNREPNRAQAYTPFESFPVVYDLNDMITLLPSLPPLPAVLVPHDVL HDDWGRYMNALIAAWQGKRGDRTSRRGYAVADLIDDWNSSFFLARGVELVLYRGRERI TAPGAGGRVDEQLLRHLSSSSLSSSSLSSTSDDSSDDDDEEDGYMSTRRSTRSGRSWA EGSSRKSDRKEKRRQKKRKDKARGRGEEDRYALFATCITSKSMSTANIHSRP" gene complement(75191..77259) /locus_tag="BOTBODRAFT_38549" mRNA complement(75191..77259) /locus_tag="BOTBODRAFT_38549" /product="hypothetical protein" CDS complement(75398..77104) /locus_tag="BOTBODRAFT_38549" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07756.1" /db_xref="InterPro:IPR002885" /db_xref="JGIDB:Botbo1_38549" /translation="MSLLSRLFSRGPIPSSRLPVHLYPCIPGFLTPRRSLSSAIPRPL PSRTTSALPHAPTVKSFFRGIQDSLERRKDGEEALRFFQEGVSRLPYSTRLSCYERAI HLFARHQQAWGATQVYRRLIREGYLPSPAATTLVLRLTHDPKEIEALMQRIVEGPIRM DEATLCTFLAKLVPNKNPELMRHILARFIKWHMSDGGSRILSAATFSVMINGYGHAGD FSTAFQWLEQYRKQCGRTSDSSDATAINPSPYATLMSCLADHEPDDQTRLFAVLRLFE SDGGIPDIVLWNIILAAASRITSHSTDSTRVIALYRLMRRKYPQIRADGYTFGVLLKA QERSHRKVHPTTRHIFRHMVEAHLAHTKGRPSLPSSFLTTSLLNLTLQTLIRTRDYAG ATVVLRTFPVCKIQPDKATYWAVVRPLLRRMRGEVKHLSGARETSWLERLLGWTVVSE RHGYQSAVAGRRVIDALLENTNSWSPIPALSAFQAAGPAELASFLEAPHCFTPPPAPT PARTLRPLMDLLRRCILADAGLSSRTSPDLQKATVAHAMANANEDMLPAKKRPKSTRK KC" gene complement(<77447..>79976) /locus_tag="BOTBODRAFT_119643" mRNA complement(join(<77447..77929,77990..78208,78259..78524, 78582..78803,78857..>79976)) /locus_tag="BOTBODRAFT_119643" /product="hypothetical protein" CDS complement(join(77447..77929,77990..78208,78259..78524, 78582..78803,78857..79976)) /locus_tag="BOTBODRAFT_119643" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07757.1" /db_xref="InterPro:IPR005135" /db_xref="JGIDB:Botbo1_119643" /translation="MLEELPDASLCNRRPPWTGHTRAIHVPAHVGVTAISRARVCVGS HVVRVYDTTTAVAPSFSIELKDVGLEWRIKEPRVTAMEFRPTTLREEEGRYLWCGTKD GHLWELDVWTGVITDTKAIAHSAAVTHIFRCGQNMLTLDESGKILVFCGNTAGGSDEM AYMLSTSEGLNSPKVHRISDKQGFVKILKGQLWTSHGPGGIGGSANSHVHGASRGPTI RVYDLASAALGSQFTPMIPLPPDHVGAVTSGTVIISQPERVYLGHEGGNITIWETDSA GTWICVQTVKISASDVVSMEAVANRLWVGSRKGHVSAYDVETKPWTMTNQWQAHDEYP VLKIMLDHQSLDHGQLTVATVGRDEQLRLWDGLLGVDWIDAELLKREASFSTFRNLNV LICSWNIDAAKPESLAGTVENAAFLESVLHSVDAPDIIVFGFQELIDLESRKLTAKTV FLGKHKRGADGPLSDKVSRQYRLWHDRLVLAVRLAMPADSPYSVIHTENLVGLFTCIF VRNTMRSSMRDVSITKVKTGMGGRYGNKGAIVARFVIDDSSICFINCHLAAGQRSKQA RNHDAAVILEEKSVFPSATDTEDWIAYVGGGDGSMVLDHEICFLNGDLNYRIDQRREN VIAHLAAGEIGHLLAHDQLLKERSNNPNFRLRHFKEAPITFAPTYKYDRRSSEYDTSE KRRIPAWCDRILYRSRDPNRVEVLHYKRHEANVSDHRPISAGFRVIIKAIDSEARAAV KAQVIEELHANQQGILLQIHDFYAKQLLV" gene complement(80706..81855) /locus_tag="BOTBODRAFT_593634" mRNA complement(join(80706..81303,81361..81729,81799..81855)) /locus_tag="BOTBODRAFT_593634" /product="hypothetical protein" CDS complement(join(80845..81303,81361..81582)) /locus_tag="BOTBODRAFT_593634" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07758.1" /db_xref="JGIDB:Botbo1_593634" /translation="MEQDEPPSPRPVSSLRSKFEQLAVSSSSYPSVLERKPGVTSRAA SDSIPSTQPSRTRGLISHLTPLTPTAEPELSHPTTSVPPAVRRHTINRRNSASLPDIA VVFDQTVPSPPSAPLDTLLKRPIPPPRVTTIPVLVTGLSPEQETPTHDSSLPLAPTPT QLSVAASSSTIDLTGRKRPPPPPPPRQSSSDPGSSIEEGTQSENVASLRSRFAYVLDR KDFCTLRG" gene complement(81901..85035) /locus_tag="BOTBODRAFT_38551" mRNA complement(join(81901..82210,82275..82872,82930..83069, 83136..83433,83490..83643,83699..83788,83848..84118, 84175..84247,84308..84376,84437..84597,84660..84740, 84797..85035)) /locus_tag="BOTBODRAFT_38551" /product="hypothetical protein" CDS complement(join(82097..82210,82275..82872,82930..83069, 83136..83433,83490..83643,83699..83788,83848..84118, 84175..84247,84308..84376,84437..84597,84660..84740, 84797..84925)) /locus_tag="BOTBODRAFT_38551" /note="GO_function: GO:3677 - DNA binding" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07759.1" /db_xref="InterPro:IPR004210" /db_xref="InterPro:IPR006994" /db_xref="JGIDB:Botbo1_38551" /translation="MPPRLSKRQQREEVLSRLRDSLLAAGGDEPAEGEAERPRPQFIF GISELSSESESDAEEAPAQEKPKSKKSKKKKKKKKSAAPAADTPPRSANDQPSAPQPS KGKGKAGQKDDFDAALEELAQKYPDMRVASSSRTGSVSTVAQTFKELLAVSPKYLDSQ AELRRFFGHKVVNSVAASSRKKPPSASHRNASVRSVLTHIPDAGVQLRSSQGLSVKQL DERTIRYKGYEAYAFLGEKWWTIEHDIQYKKMQMEFLGMVQVGDPNHFVTLLQINPWH VDTNLQLAEVFRHQEDYDKAGELVDRAMFAYERAFAGSFNFTLGTCRLDFDCVENRPF FLSLHRHIQHLERRGTTRTAFEVARLLLSLDPHTDPHGALLHLDFLAVKSGMDQWLLD MWNVWDLVKKEADFGPDDNDFRIELHCLPGWAYSRAVALRHLEIEKGDKEHSESTAAL REAVLAFPYVVPVLADKAGISLPQEVRAHQMFRISTGWDSNTPAESALHLLSHIYAHR AALVWKDGELSSWFEKTVPTVLPSNRKSKSAPMRDLALRHFATGPTQAICRHVLVCEI RSLTSFLDPTKIPNMVLAYDPLPPLSSRSRYDEKYLEEVPWPSSARRAEVRPEPHVGQ AEIAMQQLLFNEIRARVAQGAPPGAFHVDADEEAPIEDEDEGYEDDEVHDGGESQEPT HDEESVPAGRTLWQTLLNRILGDRGEGAAQDATEDQDQHPMDE" gene 85062..>85582 /locus_tag="BOTBODRAFT_139688" mRNA join(85062..85254,85323..>85582) /locus_tag="BOTBODRAFT_139688" /product="hypothetical protein" CDS join(85181..85254,85323..>85581) /locus_tag="BOTBODRAFT_139688" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07760.1" /db_xref="JGIDB:Botbo1_139688" /translation="MAAFTGAAGWPGSEQQRPASPRSTSLSSMSSWLPSYPPAPRSPA YDGSARYYGDRERDPATNAYPAADGPWPDRERDRERDWLEYDRPPRSDWEWRRNGAPR GRSRSPGDD" gene 85788..88655 /locus_tag="BOTBODRAFT_139690" mRNA join(85788..86056,86120..86578,86642..86782,86845..87189, 87257..87410,87469..87565,87625..87775,87833..88655) /locus_tag="BOTBODRAFT_139690" /product="hypothetical protein" CDS join(86009..86056,86120..86578,86642..86782,86845..87189, 87257..87410,87469..87565,87625..87775,87833..88426) /locus_tag="BOTBODRAFT_139690" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07761.1" /db_xref="JGIDB:Botbo1_139690" /translation="MKARYEKYKRTMTANQIQTLFNHHRLSSWFGERYDPSPEFVKLR ARVRKQGWQGREAKFIADLEEGKYDTLAAIATDSGAVHTGPEDDLSAQAAEENQDGEE QEEHTMDQDNANENEAANADAEANGSAPATGGDASRPRAGDISVMPEGNQVMIRTIPP DIGRLKLEEACSTVPGFVHLALGDPMQKRNYYRAGWIKFDDDANMSEAVRLLGEKKIE GFKLHVTHSTRPFISRLRSTPEIASRPDRVEKDLANVKKLAAILEDEALILNRKDENS SIETEGEEAKPPHVEHTELPKERGSEAVERRLERLVAELQEQHHEGEENGLTVKKSVI ALDLYLAYLRYAFNCCYYCAAVTDHVEELQRKCIKHVRKPLSGADSSKDERWVDWLDQ KIALLIDKNGVDPRDYGGKNYDEELAKAVEPHVKQEDEGKFRCKTCNKLFKATTFVEK HIANKHPELVKQLDDLPFFNNFALDPHRIQPFIHPPPPSGGGQHPPPQAYGLHGSSRN ADSYPRHANQYPSSYAPHYSGYGQSSYYDHSYPGYGQAYGYPPHNSYYERRRSPPRRL AERMGDLSAPVSDPMHSQLTIRAGIEGLPAKPVSNAILEPGPGGRRGGRGPGGSSLTA GPLPPPPDAKEDPRAAAGRKISYHDMDEVAEGDIELTY" gene 88671..91638 /locus_tag="BOTBODRAFT_593967" mRNA join(88671..88880,88951..89031,89099..89108,89168..89227, 89303..89317,89375..89435,89499..89650,89705..89763, 89816..90128,90191..90292,90358..90378,90441..90581, 90639..90848,90915..90965,91016..91638) /locus_tag="BOTBODRAFT_593967" /product="hypothetical protein" CDS join(88966..89031,89099..89108,89168..89227,89303..89317, 89375..89435,89499..89650,89705..89763,89816..90128, 90191..90292,90358..90378,90441..90581,90639..90848, 90915..90965,91016..91320) /locus_tag="BOTBODRAFT_593967" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07762.1" /db_xref="InterPro:IPR011701" /db_xref="JGIDB:Botbo1_593967" /translation="MSPRTTTLLGSVLVSLSSGTFYAFSAYAPQLGAKLHITHTQLNI IAFAGSLGSYGTGPIWGRIVDTRGPQIPFICALTLLFAGYMGIRSFYNGLFTLSETPH TLSPSFIMLCTFQLFCAAGGNAGLQASINSTAKSFPDQSRASATALVVAGYGLSAFIF STAAHTVFPGDTSSFLLLLALGTSTPMLVGLWIVRPIPLYESGTIGRVDTGLYEPISS VDDSSELSHSTELPTLVDTPSPLLIPSPSPVGRQTAVQIDLHGRKLLGHRDFWVLFGI LSLLAGTGLMYISNAGSITQALLAKGYPSWTVEMGAQLQAAQVSIISINNCLGRVVIG LVSDFARNKYRVPRAHFLCVVSMLFLLSQLILLETDDAQYLWIASSLIGFSYGAAFGL STVVCMEWFGLAHFSQNWGYAAISPGIAGTIFGLAFGYNVDSHISHGDTAGLASRLLP GLGRLAPSLRDVHSSAAGQCLEGRLCYGESLGLTTAACTAALGLSVYAAWHKSREVTS KILWDDEEEVEMG" gene complement(<91474..>92436) /locus_tag="BOTBODRAFT_119640" mRNA complement(join(<91474..91790,91853..92074,92130..>92436)) /locus_tag="BOTBODRAFT_119640" /product="hypothetical protein" CDS complement(join(91474..91790,91853..92074,92130..92436)) /locus_tag="BOTBODRAFT_119640" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07763.1" /db_xref="JGIDB:Botbo1_119640" /translation="MPGTRDPELETPLELEEDDAADEAVGGHSGGDDDDEGNDYPDPA NEKTVKPLTAEALAAFRQAQERAGIIYISRIPPGMRPPKVRHLMSAYGEVGRVYLKQE DPKRAYLRRKHTSTRKVHFTEGWVEFLSKKVARSVADMLNARPIGGKKGTRWRDDVWT MKYLPKFKWNMLTEQVAHENATRTARLRVELSQSKSEQHDYLRNVELAKVLEKRAEKK RKRAEEGGEVEHAADSESSSLPKPAISSKENKGKGKRPKQEVEGNSSGTQREEALGQV LGKIF" gene <92578..>94548 /locus_tag="BOTBODRAFT_59794" mRNA join(<92578..92650,92710..92732,92785..92834,92889..92913, 92968..93010,93075..93198,93254..93363,93420..93445, 93505..93626,93683..93749,93800..93852,93912..94019, 94076..94384,94446..>94548) /locus_tag="BOTBODRAFT_59794" /product="hypothetical protein" CDS join(92578..92650,92710..92732,92785..92834,92889..92913, 92968..93010,93075..93198,93254..93363,93420..93445, 93505..93626,93683..93749,93800..93852,93912..94019, 94076..94384,94446..94548) /locus_tag="BOTBODRAFT_59794" /note="GO_function: GO:16627; acyl-CoA dehydrogenase activity - oxidoreductase activity, acting on the CH-CH group of donors [PMID 3995]" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07764.1" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="JGIDB:Botbo1_59794" /translation="MLAHRLLTPRVLSSCHVASRGMATNFAKFDWQDPLNIGSLLTEE EAAVRDTARDYCQENLLPRVVEAARTETFDRSIMSEMGALGLLGATIKGYNCAGVSSI AYGLIAREVERVDSGYRSAMSVQSSLVMHPINEFGSEAQKEKYLPRLAKGEIIGCFGL TEPNHGSDPSNMETIAKKTANGGFVLNGSKTWITNSPIADLFLVWAKCDWDGKVRGFL IEKGTPGLSAPAIKNKLALRASITGSIFMDSVKLSPESVLPNGKGLGAPFSCLNNARY GISWGVMGSLEACIQAARDYSLERHQFKRPLASFQLVQKKLADAMSEATLGLLASYQV GRLKDSGEWAPEMVSVIKRNNCGKALQHGRILLDVLGGNACSDEYHIGRHVANLQVTN TYEGKIPLERNLPLFWTHL" gene complement(95380..96423) /locus_tag="BOTBODRAFT_38554" mRNA complement(join(95380..95735,95797..95880,95939..96270, 96332..96423)) /locus_tag="BOTBODRAFT_38554" /product="hypothetical protein" CDS complement(join(95487..95735,95797..95880,95939..96270, 96332..96365)) /locus_tag="BOTBODRAFT_38554" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07765.1" /db_xref="InterPro:IPR002161" /db_xref="JGIDB:Botbo1_38554" /translation="MLKGATVVGVLALQGAFAEHFAILSRLASSKNIQPLLVRTPSDL AQCKALIIPGGESTTIALLARLAGLLEPLRAFVTEKPVWGTCAGAILLAESVEGAKKG GQELLGGVDIKVGRNGWGPQVESFEAALVVNGLKDSATPFKGVFIRAPVVLSITPSAS RPPIKIIAQLPSSLVPIHSEPPEGVDSSNEPDPRTIVALRQGQHLVTTFHPELTKDDR FHEYFLRACVLGSE" gene complement(96434..101641) /locus_tag="BOTBODRAFT_593884" mRNA complement(join(96434..97714,97777..98310,98372..98526, 98594..98806,98862..98994,99059..99273,99336..99353, 99406..99498,99568..99696,99758..100003,100071..101286, 101348..101641)) /locus_tag="BOTBODRAFT_593884" /product="hypothetical protein" CDS complement(join(96527..97714,97777..98310,98372..98526, 98594..98806,98862..98994,99059..99273,99336..99353, 99406..99498,99568..99696,99758..100003,100071..101259)) /locus_tag="BOTBODRAFT_593884" /note="GO_function: GO:5524 - ATP binding" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07766.1" /db_xref="InterPro:IPR003959" /db_xref="JGIDB:Botbo1_593884" /translation="MQGVDEPNPIEPNSYHHSPQPPHPQLDAPATPPPPPQPSHPRLV LKLKPTSAPSPMALSNPPPATRRSTRQATAQSAAQSGSEYAASQHSSSPNNDPMPEDE EHAEPVVTWTSSRGRKTTLKRPTFAEDDDDEEEEGGGLDDEDDAPVRPAGRTRKSVPK RLDFIEPDEDENEEPDASWGTRLRTRRRENQNSQSNNTRTSEPPRPQGRTTRNSRRSA QADPGSSEYVQEPDHVSEEEDVEDDDAPPTSPSPEPAANEEPRGYKLRKRGNVNYTLP PPLDPMDITSGIGNNSRGPKGKAKSTAKFSMPRWNLGAKTDFTLGMGMGMDIGRVPPV PDDSDSDNGMPPAPKPFSMGGAADGGAGLYPAGANSANAFIPNDFGAAAGAPSNLGKV SKDSALADADPLGVNTNVTFDEVGGLDDHITSLKEMVSLPLLYPEVFQQFNLTPPRGV LFHGPPGTGKTLLARALAASSRNGDKTISFFMRKGADCLSKWVGEAERQLRLLFEEAR ACQPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDS IDPALRRPGRFDREFYFPLPGLDARQRILSIITRGWKGWENDNGNEALKMLAEATKGY GGADLRALCTEAALNAVQRRYPQIYKSSERLLLKPETIVVQPRDFMVSLKKLIPSSAR STASAAAPLPEQLVPLLGDTLELVKQALDSALPSNKKRSALEEAEWEDEGGEEAGFAR EMMLQAMETLRVHRPRLLLHGVPGMGQNYIGAAAMHHLEGYHIQCLDLGTLFSDSTRS IEATIVQLFVEAKRHKPSVIYIPSLRSWSEAVSETARTTVRTMLESLSPTDPILLLCV VDGAVQYLPRDVQDWFGPSRESVLALTPPTLERRRAFFENLLHTVEKPPNQFPDIAKR RKRVLEKLPIAPPLPPRMPTKAEMAAQEENDARVKALLTNRLGPILSDLKKKFKRFTK TVYEEYGVDPKTGLPPVDLDQQVLQIVMSDQLPSNGGPIVVDEIQAVPVTADAPPAAD SPKRWHDIDLEKMHAKLYYQGYLTPQGFLADLSRIIANAENDQSDADRLFKAQQMYHA AHFTLLSWGQQFSVECDRMAQREKARRRELKKSQEKEGSSMVNGATAGAAPRRSPRHN GQQPEVPMTDPTELERKLKRQRTEGENSQSPMDEDSGPKSPKRVRISPAEEDADAEGE ADPLDTTMEEIHPPVDSLDVPPPPAPEIRQPSPTPSLVPPPSAPVLVNGIQSRLSSRG PSPLPTRPLTPQPEHPPTPAAMEEVEMARTPSPPPPPFQLDPALLAELSRRLANDTGG LTIEQLEQLRASCLNAIWRRRGDWDRGDLLRDLLQLVQEYVEGVSSAVNS" gene complement(102122..104888) /locus_tag="BOTBODRAFT_594004" mRNA complement(join(102122..104612,104672..104888)) /locus_tag="BOTBODRAFT_594004" /product="hypothetical protein" CDS complement(join(102259..104612,104672..104708)) /locus_tag="BOTBODRAFT_594004" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07767.1" /db_xref="JGIDB:Botbo1_594004" /translation="MSSASVSRSRRTAPQPYGDGPALPYSLPSQSPPASPPEPSHDRL LRTVRADRAAPRHSPGIGSAPESPYSAPSPPPLMSFEATDPPPAPPRISQPPQPAQQQ PVSPPVPPQSGATSPPFPAHFNRPIVRPTLPPFPTSTRSASGGGHRSDAWNIPDESYV ESDGTPREERPSLDKDNGNRDWDKDKDWQRSITSANVSRASPTTSTKSYSPQSAGATQ VLAAIKNQTRARPVSPLRTQQPLQQQQVQAQTQTQTQARNTPPQPIYSASSASVPQLQ PQSQSQSQSQSHSQSQSQSQPENKQPPNRRLPQKYDDPPQQSTNSPRHVSPPYHSALD SSHEDSGAHPPSMQQNYSPPFPYDYPESSPGGHMSRYRPSEPTQRIPDRSLPVQEEAD DDREPHPRLPSEKLPLRNGNGSHSPSVNEGNIDDPGSPTPSSTLINPDTGLDSMDEHE HFTPRSPVAPLPYPNVSSLPLPPYPSLGYSNSHTNTRSLRGRGQAHQATSIHHALLSS QLGAMPVPLDPRQYAYFEDVITGANIGAHPEDPRHGDTVYNRWNLSELASPLSSSYNH FRPAAPIPPTPHSASAAPTPHPMSRSLAETLLYNQAMTYGGLPGGRPVPSAPSSYMSS PYPQHNPFLPPPLPPQSIVSSPSHEPLPLPPRRRSGLRKSLSKTPLNQQISALEQVPR AESTEPLSTEPSEDGDSTEREAEEEEEDVWIEEDDEDLLDEEYHPRYLVDPVKRRRKF QQKWQQLLKIVSEPSIFSQEGCANARFSSMTLTAAPTRPCCCSRPSPCLPILRPTS" assembly_gap 105529..105875 /estimated_length=347 /gap_type="within scaffold" /linkage_evidence="unspecified" gene 107519..108706 /locus_tag="BOTBODRAFT_594213" mRNA 107519..108706 /locus_tag="BOTBODRAFT_594213" /product="hypothetical protein" CDS 107778..108617 /locus_tag="BOTBODRAFT_594213" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07768.1" /db_xref="JGIDB:Botbo1_594213" /translation="MKRYERRGTIAEREVPPPLQPTMSAPANLGHSPLPGPPSQRRTP SPQVAHLNHDAMNPQPPPSAGAHSNGFYSSRGSYSQPSLTTDSPSQPASAGRSGSYHP VADNEWATNGARPLHPPHSGHEQGGQRRSARSFSPSRSPSPHDSRESSDSRRNSSNSV NDREAQHAHHRPSSPSRDHARMTPDRAHTSSPPVAPASNKAVMAYSSATSPAAAPMRN GSVLGRKDSDVPSVSDRDAEGDPDIDAEADEDMDEIEPEPHVRMNHGASWMKREDGVE VGV" gene <109003..>110082 /locus_tag="BOTBODRAFT_119569" mRNA join(<109003..109150,109222..109432,109491..109992, 110047..>110082) /locus_tag="BOTBODRAFT_119569" /product="hypothetical protein" CDS join(109003..109150,109222..109432,109491..109992, 110047..>110082) /locus_tag="BOTBODRAFT_119569" /note="GO_function: GO:4672; ATP binding - protein kinase activity [PMID 5524]; GO_process: GO:6468 - protein amino acid phosphorylation" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07769.1" /db_xref="InterPro:IPR017442" /db_xref="JGIDB:Botbo1_119569" /translation="MSLSPPRATRTGHSRYEKEVAAHPGSSTEDRPKWLGPWLLGDTL GKGTSGLVRLAKHKHTGKLAAVKIIPKVNIDTSLPNGDLKAEKIMRGVHREMVILKLI HHPNVMAMYDVWEEESDLYLLLEYVQGGELFDHLVTKGRLQPAEALFFFKQIISGIEY CHRFSICHRDLKPENLLIDANRNIKIADFGMAAYGAGMLETSCGSPHYASPEIVAGKL YYGPASDIWSCGVVLFALLTGRLPFDNENLRVLLQRVRAGRYEIPTHVPESAKDLIRK MLVVNPKERISMTDIIAHPFFTS" gene complement(112317..113246) /locus_tag="BOTBODRAFT_38559" mRNA complement(join(112317..112614,112676..112923, 112991..113246)) /locus_tag="BOTBODRAFT_38559" /product="hypothetical protein" CDS complement(join(112400..112614,112676..112923, 112991..113217)) /locus_tag="BOTBODRAFT_38559" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07770.1" /db_xref="JGIDB:Botbo1_38559" /translation="MARSREYFCCCIPARFGVFVLSILSLLGAGSVAGLLWYILVQNG RADTVDFDGTQKTTFIVVAVFYTIFALVSLFGFIGAVARKKALVSIYSTVLWICLLLN VIAGAMVIYAITRRSDAGVAACKNRIGSDNASLCDASTGTKIGVIVSFVIQLLIQLYC CIIVARYVRQLDNEDAYSTRSAAKYANVVPTGGSTYYPPPAHSAHTELLGAKAEDYEF AAPHSSFGAGK" gene complement(113358..115747) /locus_tag="BOTBODRAFT_38560" mRNA complement(join(113358..113651,113707..113801, 113868..113983,114045..114618,114672..114865, 114930..115177,115231..115747)) /locus_tag="BOTBODRAFT_38560" /product="hypothetical protein" CDS complement(join(113488..113651,113707..113801, 113868..113983,114045..114618,114672..114865, 114930..115177,115231..115414)) /locus_tag="BOTBODRAFT_38560" /note="GO_function: GO:31072 - heat shock protein binding" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07771.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR013105" /db_xref="JGIDB:Botbo1_38560" /translation="MRLAPSLIALCALLGSSFAEPDANASAGVDAPDLQALIAQANVL LSSGHSSDAARIYTQAIELAPSDYLLYFRRATAYMSVGRHAPALDDFDTVLDLTDGAF DKALLMKSKVFAKEGRWSEARSALKSYSKTSSATAETESADLLFEISEGELETKKAHT AQRTSNWPLCVEHATKALQSATHSATLRELRAECALAHGDVEQTAADLTRLTHVSPPT TAQLLRISNLSYFLTQPNTQPLGTLKQCLHFDPDSKPCRTAHRLLKSIEKGMNKLDEL EQASDWANIIRLIAGDKSGKTGLANDFDAALDDATKNLDLPTTVIPRKQSPRRLRIYR AICKAYVSAGRAKKGETWCEQTLEMDPKDESALTGRGDIALAKEDWEAAVRAFEEAFE AGGQSSNEVRTRLDKARRALKQSRKKDYYKVLGVARDADAKTIKRAYRKAAMKAHPDK GGSEEEMANVNQAHEVLSNPELRARFDNGDDPNDLDSQRGGPGGGHPFFFQGGGGGPF GGPGFGGSNFHFSFNH" gene 115751..120597 /locus_tag="BOTBODRAFT_38561" mRNA join(115751..116125,116193..117843,117903..119088, 119146..119243,119313..119921,119976..120597) /locus_tag="BOTBODRAFT_38561" /product="hypothetical protein" CDS join(116082..116125,116193..117843,117903..119088, 119146..119243,119313..119921,119976..120452) /locus_tag="BOTBODRAFT_38561" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07772.1" /db_xref="JGIDB:Botbo1_38561" /translation="MSSRTPSNNSGEGVRYEEVIDARTTSSAKALNRDLGMNIGIDTT SAKRAAANIAQYRQLLRAEASQVSELRETLRSATSRAQAEARRAEAAEQATREAAAQT MQLQLAKKTAEADAARVSAELTLYRTQLEIAVREIERAKAMIETLAREKAEAEASASR ARSTAREYKEEIIRRDALEEGRRLGRKEGRDMGSREGWAKGIDEGRAEERETGRRTWE EAKRLLLEDDRDWDRDRYRERDNRDRYRERDRGERSRGRSNGDYGWGSANQRDKNGGY RDGNPYGYDRDYPRGSSPHYDDSGAYRVEPEPQYGDFESPPEQRARQSPPGTLIVVRA TPSAKTFAPIPPVLGTSAPYEQPNPNAAGQGNTLPITVPHVEYPQPPPPQQLAPTPAP PPPPPPAPEPAPPPPPAVAMPEPPLSMPEPQLPIPDIPVAMPEPQLPIPDPPVAMPEP QLPMPEPEIPAPIPAAAAPAPPPEPSVPAPVTEPVPSAVPVPIPQRVAKRRSGSMAAS PLEPVFPAHSTNPEEDLPEDIIPVADRSGNFTLPAPYALQPPTPEPKVDDPVDPGKGK GYDYLTPSLLSSSPTDKEAPLVPEAPPVREPKPRPQARDTPIVPKKKKSRDTQPEPSP VKPAAAKPPPSKPVEVPTTRPTKQPRKVEKVEEVVEMPVEDFHDDDDSDDDANDIVIP APASGPQDLDMTTAINRSRRLKDRLREERPGPSEARTTPVSVFSVLQEDDYERRIREN RQRAEAQNKADKKEHNKKIKQGGALTPHHTPGPKLSPIMEMSDVVPSPQVRAQPPRQP TSTMFLDQSSRAPASATTGTMFTSHAPSAPKKTASSHIRKAFIPTGSPPGSPESPPVI PGEEMDRPNQYDNMPTTPYMSTTPYMPTTPYMPTTPYMAYGMPPHLAHDDFAGGGWGV PPPGVVLPHPAPPPPAEDNPDVVIPPTRSAREPKSKKGKSAPPESKAPAPSSAKDPVF VVGHSRNMSSPSVPVISLQAPSVSSSKKSEGGASPSLGFLSPNQAWNPLPNPAPEPPA APKPTADDSKKKKGKKSSKAADAAKAAGAVVEPTPSVAPQISRVSTRTSGSSFFPRPE DPQEPPSPGTRHKSNIVPEADGRSMWGGTPRAPPSEFFSPSAEAPGLNAHQGSFDHAW GAETDPVVPPTPMEEKSRSEDKGRKGARSRESKANAAAPPSPSTGWGARNEDKSKGGW FTGSKPLATIQDEEYESEIPKSPASRPRRNSITFSAKSKAVALPGDVQLGPSILRNPL SPKPPAAEIPAWGNEGGAGGDGWGAKDDAGQSAPGAWGAQAAADAAQEAAAEAAEAEA KAAEEAKAAEKAAAKAAAAATVAATKKGKKGKKK" gene 120552..121991 /locus_tag="BOTBODRAFT_594272" mRNA join(120552..120791,120861..121991) /locus_tag="BOTBODRAFT_594272" /product="hypothetical protein" CDS join(120651..120791,120861..121880) /locus_tag="BOTBODRAFT_594272" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07773.1" /db_xref="JGIDB:Botbo1_594272" /translation="MTTTPTTFLTTADPPPAPAVSRARRAILAIRTKLGLSSPKPAAS RPTDAVCARDHVPFPAPPSPPHSPRSKAEAVLGVRLPLRYHHGQILLYRRRMIPADTL SFISLNRPRPESALHVPSLEWFYSQANPSLAISPQSSPTSSVSLVSGSDDADISSGSS SDVQSEELRPSPLKISKAASPVRATRRSPSAYSDSAYSSVFGEDFPAKLRQASRGDEP PLPELKEASSAEMVKVNGTLKDNLPRPSHESKASSATVYFTPPTSPLPMSFENLIAPP QKHAARKSAAHSTLPFPKHTGRIEDDRRHVSLAADFAPPYDPPDPSEGAADEDWEKLE ASLRRARERRAQRSVRSATRERIWRTSGLSGVLEDAGRGGMQVELGFATRGR" gene complement(<123025..>124908) /locus_tag="BOTBODRAFT_59803" mRNA complement(join(<123025..123222,123280..124007, 124065..124832,124884..>124908)) /locus_tag="BOTBODRAFT_59803" /product="hypothetical protein" CDS complement(join(123025..123222,123280..124007, 124065..124832,124884..124908)) /locus_tag="BOTBODRAFT_59803" /note="GO_component: GO:9320 - phosphoribosylaminoimidazole carboxylase complex; GO_function: GO:4638 - phosphoribosylaminoimidazole carboxylase activity; GO_process: GO:6189 - 'de novo' IMP biosynthetic process" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07774.1" /db_xref="InterPro:IPR000031" /db_xref="InterPro:IPR003135" /db_xref="JGIDB:Botbo1_59803" /translation="MDKTVGVLGGGQLGRMLAASASLLNVKMVILDVGDHAPAKQIIS PLPPLAHIEGSFADPEKVWELAAKVDVLTVEIEHVNVDVLEQIEKKTQIAIHPSPQTL RVIQDKLLQKEHLAAHGVPTPRFTQVASSQQAIVDAASLLGLPLMLKSRTLAYDGRGN FTLRSLDQASEALSFLEGRPLYAEQWAPFVKEIAVMVVRDVQGSVRSYPAVETVHENH ICHLVLAPLRTADPKVGQRAQHVAEEAVKTLSGAGVFGVEMFLMPDDSILINEIAPRP HNSGHYTIEACLTSQYENHLRAILSLPLGSTSMHLPSAAMLNLIGTSSEMQEITRASH GALSIPGANVHLYGKAECRKGRKMGHVTIIGESDAQVRERLRALLQYVPSSSPDTHAP PLPEKGHSHTFPLVGIIMGSDSDLPVMLPAARTLDHFAIPYELTIVSAHRTPDRLVSY SKSAASRGIRVIIAGAGGAAHLPGMVAALTVLPVIGVPVKGSVLDGVDSLHSIVQMPR GIPVATVAINNGTNAGLLAARIIGTSIPELREQMAEYLSNLEKEVMVKVHNLEVVGWE EYMVKK" gene 125018..129650 /locus_tag="BOTBODRAFT_192233" mRNA join(125018..125543,125612..127934,127996..129338, 129393..129650) /locus_tag="BOTBODRAFT_192233" /product="hypothetical protein" CDS join(125103..125543,125612..127934,127996..129338, 129393..129434) /locus_tag="BOTBODRAFT_192233" /note="GO_process: GO:7165 - signal transduction" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07775.1" /db_xref="InterPro:IPR000159" /db_xref="InterPro:IPR001452" /db_xref="JGIDB:Botbo1_192233" /translation="MQAQTDPRRPARTEDTRNEIHSDDPRLQQHHGDNSYASDEDHSV MEDDSSGEEGEGEYIDDDGSSSLSIPNESIDFDLVHSFTTFVATVEGQANVVKGDSLV LMDDSNSYWWLVRVLKTQEVGYIPAENIETPFERLARLNKHRNVDLALATMAERQEDP NAARELKTSTRRNPASARPAARNVVFKKVSSVFHYPPAVWNDETPLDEENWDEDDYGS FGEENEEEEVLELGEGMEPDDGMSWEDSVAEEQQARRMNDSQEHGSGDANTRAVISVD TVPESLRPGPQRQLQQPVAQSQQAPQQVAASPATQTNSQAALGLGLASSIRRQTSRDR VVPGPQQPGARELIDPAQVTETRQISVTPHIAREGGASDAWAQPEVVPRSASIGSVNS SESLGAKRSREDGSESDASDAMKKKGKNRVLQKSGAAVANSSPSTEKEKEKKKKGGMF GSIFGKKKDKKEKDAKKAGLVNDGESFTGRSSEDSSKSSNAPHVGAPSETVPPNLATR RTDSADFRQPASALQLTPVSAHVQQVDSQQQALFQQHLNRPRPSPPDASSQYGLQAAA TQQLSQSAPSPRVSQLLSPSSRPGNRPGSLLISQSSVDGGALVPELSVLRVFAGEHLQ TDATFKTVLLNSSTTTADLVRQAMQRFRIAHGDHERDFYLTVKQLGGDEAVLRLDEHP LGVFEQLVERAMSAPTVKRSSVGSISSLASNLSIHPAIAKLGMNDFTDDSAVKFYLNR QGPNAEPTQGARFSDMAEGEFGVRRDSILDDASEYSTENSVSRALGRNFLSVTTAASG TVTPERFSSPTARFAVQIIIHPDDLPDGMVFDPHTEAIVPRVTLQNRSQSSAAVSPGI SQTHRKKVFVFPKNTTVAEVIEVSLERFGIVEGVVDGGDEVEDKSLKRRSNTRVRYGL AVELQSKERTLLPSSKVLDAFPRPPVFKSIERRSGDSRRRSADAAQLLGSTDDVQPED PIFVLRRVSGFRSSISSRHRFSAPLDEVALQRIQRESVSSDTSTYSERTATLVDSPTA QTSPKPMSRQELIAAQRAASRANQRAILTAQNNSERGVDILLPDRATIRSIRSADERM RYSYIHPDGETYDISDIIEEEWSDERTLHSASDRSWAASEDVIQSAARLSPNTQGGRV SDAAIRRGDLLEGALVNNRRGLEERIDRVLTRVKDGKVASRLAVAPVPEGRNDDSTVS GPMAQAQERTLPKASIPLVTSPIAPRTNSPNDSSLRSNPTPPTRTPSHRQHQPSIASV LSDLSAYATPQPSTPTTDIPRQEHPSSHIPPIRHRSPVTVHKNDFGFSQMMAVVELSA ANQKPPPAEPISTAEELLFGHADFSIDELHPKIRDIFEPTFMQLDNMDKELTALLRST FHAA" gene complement(<129646..>131324) /locus_tag="BOTBODRAFT_180451" mRNA complement(join(<129646..130407,130484..131154, 131222..>131324)) /locus_tag="BOTBODRAFT_180451" /product="hypothetical protein" CDS complement(join(129646..130407,130484..131154, 131222..131324)) /locus_tag="BOTBODRAFT_180451" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07776.1" /db_xref="JGIDB:Botbo1_180451" /translation="MAPTLLARATTEVSTATPSSSQPPNPQMYVMVVMCILMVVIISM LVAFAVAFCICYRRRRFSFRAPTGAHTLVRAQSVPSSLSTPIISLAELEKAIIKEDKA EKTRRRPTSSFCTPQKFMASGYNPQQFAPPSPLLCANASRVDLVTESCPTPDGSPTRP NPPLEPSLALLTSTQTIDKTTATTYTESVGTGGPGSYRKRGGAERERSLDTAGSVNAA ADPKKSHARETFGVFDGGLRASHRQKSGAATMGSRSESILAPSDKPALSANATSLDAN ESFGAVTNEDEQHYTEWLRVNLPNNPSRVLINSRPSRVYRPSIASNTTTSTVTQTTTS LAWSNHLSTSTEASTLSASFPPVPVLEYARPELQHRSQAPKGGGHRRLASSSSRRYAL PAQLPDITCLPYAEPATNPSTANSQKPECVKLKINYLPSGSTESIIVALFIDIYITFE DLCAKVVERLSLKKVVISQGGHGGEIIDDGEKWATWLGECLRVKGDDCEEGLNMKLVL FAR" gene complement(<131539..132606) /locus_tag="BOTBODRAFT_149058" mRNA complement(<131539..132606) /locus_tag="BOTBODRAFT_149058" /product="hypothetical protein" CDS complement(131539..132264) /locus_tag="BOTBODRAFT_149058" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07777.1" /db_xref="InterPro:IPR001452" /db_xref="JGIDB:Botbo1_149058" /translation="MSAPAPPRDASNPALSPASAPSSTRPAPSSPVLSRKSSTVRPTS NPVLTPAPASDLPAKRRHIIVYDFAYPNSDDRHRGLVLDTGNHGSNRSSASSGVTGFF GFRLNPFKSLAVPSEGVDGEGANSQRSSRASASSTSSTYHDAPEYSDEDEEGADRIAG AGAPPFRPGIYRAMYDFEPEGDAEMGLSEGQLVRVLGRGGGEGWVVVSDPDKGNGQAL VPEGYLEFSHADEEDGGTTPADV" assembly_gap 133158..133299 /estimated_length=142 /gap_type="within scaffold" /linkage_evidence="unspecified" assembly_gap 134166..134185 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<135099..>138480) /locus_tag="BOTBODRAFT_70220" mRNA complement(join(<135099..135233,135307..135551, 135617..136201,136253..136440,136498..136739, 136796..137032,137107..137352,137407..137559, 137617..137772,137840..138038,138113..138210, 138276..138355,138459..>138480)) /locus_tag="BOTBODRAFT_70220" /product="hypothetical protein" CDS complement(join(135099..135233,135307..135551, 135617..136201,136253..136440,136498..136739, 136796..137032,137107..137352,137407..137559, 137617..137772,137840..138038,138113..138210, 138276..138355,138459..138480)) /locus_tag="BOTBODRAFT_70220" /note="GO_function: GO:5515 - protein binding; GO_process: GO:16070 - RNA metabolic process" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07778.1" /db_xref="InterPro:IPR003890" /db_xref="InterPro:IPR015172" /db_xref="InterPro:IPR015174" /db_xref="JGIDB:Botbo1_70220" /translation="MSRGNYDHDRRREAIPESGEQRLRSAIIKIGEDPEFHPTHELPR VAKYLRTNLPASAPAISEGFRIGVTEQPYKIPYYSSLLALLFAPEDPAPDAQDGPSTS SEHVARVVLDDFFKGFQAFLDRLAWRELRLCIHFFSHLVLLQTVSATSMLALLQSFAA VLDEPGVSFYRAQQAALCVGEGLIRAGSVLYDAHREEITELLASISSLSESYTTLKAL TRPVTLYHDPAHASGSDELLDSLLAVLSELQAASFPLVSCIPRSHEHFPQTTTSPFDL PAVLVPPEVVEIDGEEAAAADPEKSSIKTDMPSSYLRLFHDESTPSLSTPAGFVLRSA FSDVIGIFEVNRKECARILLEMPRWVENGTFKGKTGVSPPEGADPPNEDANETGWILE NTIVETLLSTLLLLPAPPHKPVYYFSLVTELCKASPQTVGPAVGKSFRKLYSLLGEGL DVEVARRFSEWFSSHMSNFGFNWVWREWIPDLSLASHHPKRAFIRRALEYETRLSYHD RVLKTLPPEFQAAEAEAIAAEAPGPLFEYDDPAHPLYEPAQSLLTLIRGRSKADEVVQ HAETLRSTISDTPNLTPDSAVRSIAVQCLLHVGARSFSHFLNAIERYLALLRSLSNTA DDKADILDAAGRFWIKNSQMVGIVFDKFMQYQIVEPGDVIAWAFRTATGHRLGTNEWD IVKVALDKSIGRVLLTKRKVALLRKEEEDVSARAKAQAAAEEDSQMDVEAEKKDDAVV SDSPALQTSLKALATLTREQRMTFSRALDEFVAVLTKSASPSIGVIGAEAWEGRADWN EEQWQFWEMWGWYRHFCRAYAVHLGTYAATLETVSLGETIGGDVGEAARLVRQTWNAA LGREM" gene <138769..142599 /locus_tag="BOTBODRAFT_647961" mRNA join(<138769..138793,138863..139056,139649..142599) /locus_tag="BOTBODRAFT_647961" /product="hypothetical protein" CDS join(138769..138793,138863..139056,139649..142432) /locus_tag="BOTBODRAFT_647961" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07779.1" /db_xref="InterPro:IPR012919" /db_xref="JGIDB:Botbo1_647961" /translation="MSFTGTPLGQGKRTVDHHKFMTGAPRSRDGADYIQRSAASAPSA PSADEPSASPARKRTLPSTNSISVSYAYGPPSLPDTHAPEPSRSTSTLRPTASNDDGD DANSVVSHNSARSRSQTSTAAERYSRLRAQQQQQQQPRGPGLIARPPSPTNLKDTSVN IATAFRQAAESGAADPFPDALRHQSIDPASDSSHPAPTSRRLAVPAHVSRFASQQPDD TSDAPDPDHRRDRAKSPIDTVKDIAAKAIFHLRQLSPAPFADASNPAPSASAILPDDF DNVSGSMDLANDYAEEERLMAQMDSQLDARAAAASGSNPDHSLSTKPTKKKSRPSHDN KAYKPSASDLEESPDEDGAGSGGSSSRRRRKPIPGRARLDGGLPMIGPETRRKRPSTR KQANNKPNPADSTNPSSILHSRSSRSDSQLSAHDDSFPDVDMQDEEELDDQDRSESEA ADDRNPYTTEDERDQLSIERELAAIDASENPLVGAALGSMVRTLYTVAKSGAMMLLLL ASRTVSSIWDLLISQPVSWLGSSTGGIADIHVPAFAKYAAMFFGLYVAAQLLSQSPTS TSQPGPGYIPGSGDVPTYHAPDLPPGTVGELAGRLAQLEGAFADLNAVHRHTLEKAEE GVRANEDISTRVLSLQALLEGETKRAITAEEKYKNAALQGLENLRDHYAKIRGEIDGL ASKGSPGTGESHGDILSKLHPALSQLQTRLDQAEALAKEALDLSKASAQPPSRSSHPH DDSPLVIQSVDGQDVTTLLKSLVDFSLLRHLKDGVAMPDYALYTGGARVIPDLTSPTY EPRSDSWARYLFDRMAGNGFALGRPPVTALVPDNSVGNCWPFAGAAGHIGIMLSQPAF ITHVTVDHASKDIAYNIKTAPREFRVWGLVEGDQNIQKLAAYHAAIDGESRDDDDPAF FTNSPPSIRPVHLVSFSYDINSPSPTQTFPLPEKLQKLGLDIGIVVFQIQSNWGDSDF TCLYRVRVHGSHQDSTSDQHAEGLPDVS" assembly_gap 139162..139560 /estimated_length=399 /gap_type="within scaffold" /linkage_evidence="unspecified" gene complement(<147065..>147991) /locus_tag="BOTBODRAFT_180456" mRNA complement(join(<147065..147703,147767..>147991)) /locus_tag="BOTBODRAFT_180456" /product="hypothetical protein" CDS complement(join(147065..147703,147767..147991)) /locus_tag="BOTBODRAFT_180456" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07780.1" /db_xref="JGIDB:Botbo1_180456" /translation="MLVRVKDKNPGILLSPTADHVPSISKSNHVHVNLVMPPSPSDPE GPTCEMWFPLSTIPHACIAQLSEGNGGARMLKVLVEFWEKVVLPCIAEHCDIASTPFF ATTVRGNTLRTATKGQPEGNLNRPKQLCVDPDIFVAIQQSMCDKVQRDPSLAVFKGFF FVVNLKGCKQSSSITIKLDDLDLPKSEGPLAKLERQFSELDFDYMWGRRNGELYLDLA ISFHPDKECAGPRGPERMPLVGLWRQEWLVASYGVARFTMGKAHYANTLSRSVPTPLS YDMWEADVPHL" gene <153989..>154365 /locus_tag="BOTBODRAFT_180457" mRNA join(<153989..154040,154115..>154365) /locus_tag="BOTBODRAFT_180457" /product="hypothetical protein" CDS join(153989..154040,154115..154365) /locus_tag="BOTBODRAFT_180457" /codon_start=1 /product="hypothetical protein" /protein_id="KDQ07781.1" /db_xref="JGIDB:Botbo1_180457" /translation="MSLYHPLLNSAPLLMQRSDCAPQLPHLGPAIVDPYTIALRAVVD EIELHLVVRHRTGNALPPHLHPDHPNVMQWMLGQGNELLQSQDISQELLASAPEYH" CONTIG join(AYEP01001086.1:1..5341,gap(256),AYEP01001087.1:1..1803, gap(2338),AYEP01001088.1:1..95790,gap(347),AYEP01001089.1:1..27282, gap(142),AYEP01001090.1:1..866,gap(20),AYEP01001091.1:1..4976, gap(399),AYEP01001092.1:1..15040) //