LOCUS KK100223 106984 bp DNA linear CON 26-FEB-2015 DEFINITION Monoraphidium neglectum strain SAG 48.87 unplaced genomic scaffold scaffold00001, whole genome shotgun sequence. ACCESSION KK100223 AYTC01000000 VERSION KK100223.1 DBLINK BioProject: PRJNA221625 BioSample: SAMN02981574 KEYWORDS WGS. SOURCE Monoraphidium neglectum ORGANISM Monoraphidium neglectum Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Sphaeropleales; Selenastraceae; Monoraphidium. REFERENCE 1 (bases 1 to 106984) AUTHORS Bogen,C., Al-Dilaimi,A., Albersmeier,A., Wichmann,J., Grundmann,M., Rupp,O., Lauersen,K.J., Blifernez-Klassen,O., Kalinowski,J., Goesmann,A., Mussgnug,J.H. and Kruse,O. TITLE Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production JOURNAL BMC Genomics 14, 926 (2013) PUBMED 24373495 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 106984) AUTHORS Bogen,C.C., Al-Dilaimi,A.A., Albersmeier,A.A., Wichmann,J.J., Grundmann,M.M., Rupp,O.O., Lauersen,K.K., Blifernez-Klassen,O.O., Kalinowski,J.J., Goesmann,A.A., Mussgnug,J.J. and Kruse,O.O. TITLE Direct Submission JOURNAL Submitted (18-NOV-2013) Department of Biology/Center for Biotechnology, Bielefeld University, Universitaetsstrasse 27, Bielefeld, NRW 33615, Germany COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8 Assembly Name :: mono_v1 Genome Coverage :: 49.3x Sequencing Technology :: Illumina GAIIx ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..106984 /organism="Monoraphidium neglectum" /mol_type="genomic DNA" /submitter_seqid="scaffold00001" /strain="SAG 48.87" /isolation_source="basin in greenhouse" /type_material="reference material of Monoraphidium neglectum" /db_xref="taxon:145388" /chromosome="Unknown" /geo_loc_name="Germany: Koethen" /collection_date="1980" /note="habitat freshwater" gene 243..1377 /locus_tag="MNEG_0001" mRNA join(243..275,444..602,874..1038,1285..1377) /locus_tag="MNEG_0001" /product="pyruvate,orthophosphate dikinase" CDS join(243..275,444..602,874..1038,1285..1377) /locus_tag="MNEG_0001" /EC_number="2.7.9.1" /codon_start=1 /product="pyruvate,orthophosphate dikinase" /protein_id="KIZ07928.1" /db_xref="InterPro:IPR015813" /translation="MQKLGKEVPYKVGTMIEIPRGALRAGDLARTAEFFSFGTNDLTQ TCMGISRDDAQAKFLAHYMKTGILAVDPFETLDTLGVGELVRIAVERGRKTRPDIELG ICGEHGGDPASVAFFEEVGLDYVSCSPLRVPIARLAAAQAVLRAKKA" gene 2557..4996 /locus_tag="MNEG_0002" mRNA join(2557..2607,2784..2809,2960..3062,3410..3577, 3852..3947,4138..4245,4491..4574,4838..4996) /locus_tag="MNEG_0002" /product="molecular chaperone GrpE" CDS join(2557..2607,2784..2809,2960..3062,3410..3577, 3852..3947,4138..4245,4491..4574,4838..4996) /locus_tag="MNEG_0002" /EC_number="5.1.3.1" /codon_start=1 /product="molecular chaperone GrpE" /protein_id="KIZ07929.1" /db_xref="InterPro:IPR000740" /translation="MVSPRHPRTLLLRAAGEEEAATAEASTEEAGNGTAAAPAAPPLE RARAALEADELDKATLEEALAELEAELSALRESAAAAEAEGARAVALEGSLSAAKDQY LRLQADFDNFRRRTAKEKDELGSRAKGDVVVGLLPLVDNFELARTQVKTETDGEAKIQ ASYQGLYKQMVEILRGLGVQPVNTVGSPFDPNFHEAIAREANDDVPDGTVLQEFRKGF AMGDRLLRPAMVQVSFTDKPAEVPAAETQEEETPEQPAAQQQEGQQ" gene complement(5544..5949) /locus_tag="MNEG_0003" mRNA complement(join(5544..5725,5850..5949)) /locus_tag="MNEG_0003" /product="hypothetical protein" CDS complement(join(5544..5725,5850..5949)) /locus_tag="MNEG_0003" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07930.1" /translation="MTRSSPSHTPDPKPSLAYGGQKQLAAMDASTDGSGGNRDFQELA AIIKKRRAEAAAAAEQAAAAAAAAQAEPEAPAVESAAADAPQAGAPSAE" gene 7345..8851 /locus_tag="MNEG_0004" mRNA join(7345..7389,7493..7520,7745..7831,7980..8038, 8192..8307,8522..8619,8811..8851) /locus_tag="MNEG_0004" /product="ubiquitin-conjugating enzyme E2 N" CDS join(7345..7389,7493..7520,7745..7831,7980..8038, 8192..8307,8522..8619,8811..8851) /locus_tag="MNEG_0004" /EC_number="6.3.2.19" /codon_start=1 /product="ubiquitin-conjugating enzyme E2 N" /protein_id="KIZ07931.1" /translation="MAAAQAAQLPRRIIKETQRLLSEPAPGISASPSEDNLRYFDIMI AGPSSSPYEGGAFKLELFLPEDYPMAPPKVRFLTKIYHPNVDKLGRICLDILKDKWSP ALQIRTVLLSIQALMSAPNPDDPLAENVAKHWKDNEPEAIATAREWTRLYAHGPT" gene 11229..14402 /locus_tag="MNEG_0005" mRNA join(11229..11675,12031..13450,13711..14402) /locus_tag="MNEG_0005" /product="hypothetical protein" CDS join(11229..11675,12031..13450,13711..14402) /locus_tag="MNEG_0005" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07932.1" /translation="MRAHPQQQLQQQQQRGGSNGAIPRPSSGPAWGRAGAGVAAVSGA PPPPPRSAPASAPVPVPAPPPPLGAAGGAPAAAGSPAVRSSPIDISGPLEARKEANRL RMSMTGKKDRSSPYGTPKGGLKSPLTSPLVGDPMKVAALNLEPGVSKMPNEVLAEFGK FKKSLEEQRRAEEMRAIKSTLTASLQRTSGDGGSGSGNSSAAGAPPAGAGAGEDGGVG AAAGSGKPPQAPVAPAGAGGEAKKSSFKFNPNAKPFSLNVNAKPFVPGTSGGGSSGGS GGGGLAPAAPAVRQPAVPIPAGNIGAPPGLGAPPGAMPGAGGHMGGAAGPPPPPPPGA VVGMGGPPGVMHPGGAGGSLQGPPHMMLVPPPPGAMPGLQHGGMGGPGAMVPPGMGGL PGHPGGRGPPPGAMGPPGALGPQGGPVAMMPLAVGLIPMGPAPGGPLAGGQGLPPGVM AGPRPPGGMGGPGGGGGGGGAGKGDHPERRGGPGGPGGPGPHQGGLRPDPRGPPLDHH GPPQRGPQGGDHHHHPGGGGAGSSGRGGPDMGVRGGGGGGGEGDGHHRSGAHHRESPR VGKADGHGGGDGHYGGRDNGGGGPGGRGERERDGGYGGGMGGGPPASREGSFPSANGP YSMPMSGGMMPTPMPVMMAPGGFMGAPGQMVGFSPGQQGPVMVRPMGPPGAMFLQMPV GMPFVPVAPGTSPSGRAPFFPGGGGFIAVGPGPGAPMGMPGAPMGMPMGADGGPHGGP GGHGPGGPSPGGGRGRGRGGRGGFERHGGGRGGVGPYHPSGPPPPSGGGERGSSSAAP HGSPQQVPRDGSSQPAPPPSQPPPPPLEPAAVPAAPVAPAGGAAGGAGEGGAVE" gene complement(15461..17669) /locus_tag="MNEG_0006" mRNA complement(join(15461..15696,15898..16219,16433..16748, 17029..17669)) /locus_tag="MNEG_0006" /product="hypothetical protein" CDS complement(join(15461..15696,15898..16219,16433..16748, 17029..17669)) /locus_tag="MNEG_0006" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07933.1" /translation="MATQDPEAGRLAEQVAALRWRCLHAPADDAPHDDSPAGARTGST AAASAAAAIIALPPPPLLPPQQPIQREPPSFGEQLFALERRWGALRKLLEAPPDIGVP GIGRGAAASPAGLLRGLLSELFRDVEALWLDAGREPAAYSLMEAVADAAMEFETEAAV AAAARAAGVPAGGGGARGGALETASAFGVARAAALAGADGARRVILSDDLWQQWDTFA ARTRAQEILSQELEQAAFAAAAALEASVLDAATDACAPASPMTQATVPLRAAVPAATS HLVSADLPLPLIGAASAAVDTVAGVAVLGAASSQAIAFVGNKQAGSSSACSSSSDFTA AAHAPHAESSAQGRLDDGKAITAAPMSRRQRQREHRRLGQQQQQQSAAAIPDAAAATA APHTAGQAVTMQQQQQQQQQQPQRPCRHGAKRRRAANAAGAQLEAAARAIAGWRLQGV AKPRARVARGELQRPRDSSLRGTLLRAILRVARAAEVVTAGTIAGAALSHAFLA" gene complement(18925..24613) /locus_tag="MNEG_0007" mRNA complement(join(18925..19068,19242..19393,19571..19660, 19881..19978,20231..20379,20600..20704,20936..21075, 21211..21277,21477..21601,21802..22146,22345..22528, 22738..22989,23217..23327,23531..23632,23921..24098, 24377..24425,24592..24613)) /locus_tag="MNEG_0007" /product="5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase" CDS complement(join(18925..19068,19242..19393,19571..19660, 19881..19978,20231..20379,20600..20704,20936..21075, 21211..21277,21477..21601,21802..22146,22345..22528, 22738..22989,23217..23327,23531..23632,23921..24098, 24377..24425,24592..24613)) /locus_tag="MNEG_0007" /EC_number="2.1.1.14" /codon_start=1 /product="5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase" /protein_id="KIZ07934.1" /db_xref="InterPro:IPR002629" /translation="MAVSTTIGFPRTGSKRQAKVALESFWKGKTSEPDLVASFAAVDE EAWRAQQAAGVQLIALDGTYYDQVLDMVYALGVAPARFKHLSGLELYFAMARGAPNAP ALDMSKLLDTNYHYLVPELEEGFAPKPDFSAILDRLKRGQALLGKDAAVPMMVGPVTF ALLSSTTLPIESVVEKLLPSYAQLLRQLQAVGAPEVQLHEPALATDKGAAAQRAAQAA YAQLAAVGCPIHLVACYDDLGEAYPWVAQLPVRALTLDFCGVPGATAPNATLDLIRAN GWPADKRLGVGCVDGRSVWADDEGACTALLNELRTLGASSLAVTSSVSLQHLPWDVTL EPALPAGLAPRLAFAVQKLGAIARLAAGKGVSGAAGAAGGWVGRVRDSAMELERAMFD RAENFEARRAKQPQFPAFPTTSIGSFPQTAQVRRLRAQLKSGAIDRPTYERLIDQQIA LAIGIQEGLDIDVLVHGEAERTDMSEHFGMQLSGMVFTQHGWVQSYGSRYVRPPIIAG DVAFVNAMTVREFKVAQDLTPRPVKGMLTGPVTILNWSFPRKDLSRRAQAFQLALALR QEVAALQDAGCRIVQVDEPALREGLPLKHAKWDSYLSWAVDAFRLCTAVAAPSTQVVT HLCYSDFGDIMKPIIDMDADVLTIENSRSGDAMVRALAQAGYTADLGPGVYDVHSPVV PGVDALVAKLRTFLATGILAGAPERLWVNPDCGLKTRTWDEVVPSLRNMVAAAHALRA EVEGPSKGPGKGVAATTAAPARSCAAAGCC" gene complement(32577..33782) /locus_tag="MNEG_0008" mRNA complement(join(32577..32726,32998..33090,33354..33419, 33525..33613,33737..33782)) /locus_tag="MNEG_0008" /product="50S ribosomal protein L18" CDS complement(join(32577..32726,32998..33090,33354..33419, 33525..33613,33737..33782)) /locus_tag="MNEG_0008" /codon_start=1 /product="50S ribosomal protein L18" /protein_id="KIZ07935.1" /db_xref="InterPro:IPR005484" /translation="MFTSMPTVARAAPSTGRAFTPVVCKAGQDSRKARTAKRHQSIRK KVSGTTERPRLAVFRSNQHIYAQVIDDTRSITLAAASTLTPDVKAAVEGNGGTVSAAE AVGKKVAELAQAAGISKVAFDRGGFAYHGRIQALADGARGAGLQF" gene 34135..36200 /locus_tag="MNEG_0009" mRNA join(34135..34221,34378..34533,34734..36200) /locus_tag="MNEG_0009" /product="Alpha-1,2 glucosyltransferase ALG10" CDS join(34135..34221,34378..34533,34734..36200) /locus_tag="MNEG_0009" /EC_number="2.4.1.-" /codon_start=1 /product="Alpha-1,2 glucosyltransferase ALG10" /protein_id="KIZ07936.1" /db_xref="InterPro:IPR007006" /translation="MSAAWSVTVLSLLLAVVAVVNKLAPEAYMDEPFHVPATQRYCAG DFTTWDPKITTFPGLYVVGAAYAWLARGLAGWAGIRMEVACSTAYLRSLNAILALACL QLAHAVSYELQRRCWGRTAVGRRRQRLQDEVQQGGQQHNNQQHAAHHQQQQQQQQQQQ QQRGAQQPSNADEVAMRRSALVLALVVSLLPTHAFFAFLYYTDVASMAALLLTQLLLL RGMVRGGALAAAVAVGMRQTNAVWVTLMIGGAVLEDLLEGDGQGQGGAQQQQQQQQQG GQTAAKEGYYGGEAIGGGAADATPQDLSLIEELSAALPRTWRFRQQLLERYGPLLLVP AAFAAFVVWNGGVTVGDREAHAPVKHLAQPLYFGLFALAAAGPLLLAPAAGGGAPALL AAVRRRPVLEAAGTLVAVAAAALAVRRGTLAHPYLLADNRHYTFYLWRRVMARHWAAR YALIPAELLGWRLLLGGLAARQRRLWCAAYAAAVVVTLLPAWLVEPRYFTPGLVLGLL HLWSPGTAAAAGGGARAAARWNACALLATGLGYAAVNAAVLYMFLARPFSWPDGSVAR FMW" gene complement(36905..39429) /locus_tag="MNEG_0010" mRNA complement(join(36905..37219,37502..38457,38713..39033, 39231..39429)) /locus_tag="MNEG_0010" /product="hypothetical protein" CDS complement(join(36905..37219,37502..38457,38713..39033, 39231..39429)) /locus_tag="MNEG_0010" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07937.1" /translation="MARRLALSVLVLALFAGAAMAQDCSGITGCLKCGMRGKKEGRDD KVWCTVCDEANGYALKAKKGRCGCAAGYYSRTAEGDKLGACKKATGTTVAAAGPINDG ANIARECLDNSIPDVTHGHCECKAGYYVLLGGQTPRCIQCTPGSYTDAPNLRLACKLC SVGKIHNAAHTACINLSEAFSGVADVITGVQAKAAEVVAGAGAATQKSVADARAAAQD ALDGLAERLDASGLPEGAQRGIATVAEHLKPAIAQLSAHAQGALNNVTATLKNATGLD LPSAFDDLDIQDRLTSLGNSALAQVNSTLQTAIKAAPAALKTVVAAPVTANAAAPADA KAVPSAVVPDVHAPIMAANATHNVTGRPWPVIARAVDLSSVPGFELADPRLAERDADD VDEIVEEGGTPGDDSEPLEPSDHLVSSKHHLAPSEHPAPSEHPAPSAHATFVDALVKR LNLTQPFEKIKAKMQKEGDENQPSMSDYLGEVPSVGHILNMLRGGLPPIEDIPGLEQG STGPMDTMVKLLRNVGGEDSRPREGLEEVMPSIMHGVMSNPLLSMRQRMGSTGQDQDE QGDQDSAAPKVRPAGQAHVPRSHITYEYED" gene complement(40289..41765) /locus_tag="MNEG_0011" mRNA complement(join(40289..40687,40897..41036,41179..41375, 41605..41765)) /locus_tag="MNEG_0011" /product="hypothetical protein" CDS complement(join(40289..40687,40897..41036,41179..41375, 41605..41765)) /locus_tag="MNEG_0011" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07938.1" /translation="MKAKSKKIARPVTVWMDRSAPRTPSYESMRASVRAQGAKFHANS QAYEEGKKSKYTGLWCRKTEWTTQWSCCLREPGRGGPDHSWSPDDEPLLLLQCNSEVE AALTHDLGALWLTLNATGGATEEQLKRMRWNLPQLQLWQDGAVKSLSGIHLEDKGRAR TTIRRLAQRLLRQLPAGMLPPAQAKKIAKDDKAKAVKKERQRKAAAKMREADKKRFAK VAFLVHQASLTARKTQKQEAAKRRAAEERAKAAKKRAAEREAVARIKKVRAVAEAERA HERLKRERDARVKQRATKRART" gene complement(46174..48982) /locus_tag="MNEG_0012" mRNA complement(join(46174..46293,46559..46780,46950..47099, 47302..47505,47717..47892,48964..48982)) /locus_tag="MNEG_0012" /product="hypothetical protein" CDS complement(join(46174..46293,46559..46780,46950..47099, 47302..47505,47717..47892,48964..48982)) /locus_tag="MNEG_0012" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07939.1" /translation="MAQCARAEHSSSEGWLVLDRFHFPDGSTPVEVTFGCGMRETGEI YRQAADGILGMGNNANALHSQLARAGITSRVFSLCFGFPAGGTLLLGDVGLPPSVGPL SFTPLLASPTPYYVVRLEQLSIGGASLNLEPAIFAKGYGTVLDSGTTFSYLPTAAFAA FTAALDAAIVGRGMRKGSGPDPAYPDVCYSGAPEKFEDAAKMFPTASLRFAGGAVLSL PPHRYLFLMGRGEYCLGVFDNGQSGTLIGGIAVRNALVLYDLERQRIGFAEADCPNLG SAVAAAAAAEPVSPGCRDTH" assembly_gap 48619..48797 /estimated_length=179 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(49674..51147) /locus_tag="MNEG_0013" mRNA complement(join(49674..50276,50479..51147)) /locus_tag="MNEG_0013" /product="hypothetical protein" CDS complement(join(49674..50276,50479..51147)) /locus_tag="MNEG_0013" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07940.1" /translation="MDQWHSLRDAALGRFDGGYGEGSVTIAKRLAHFAGGGFLKTSWE AEAARQARMARVNTEEVEDVPKMTAGDVGAAGVGVGGEAAGAISSDTLHISSGSRSPQ DGRSSEQEQQEQEQQQDASVGNLLDERVGRGSGGAAQAAAAGGEEEWGQDDEGFDGDA HAPAALVPVTSMLALAMWAVAVAQWWPVVPEAWYGLTNGLADVTLWQLATTYPDTPVT WALQMDTTAVAVDGEWHRLLTAGLLHSGLLPLVCCADGVRNAGSWVEAYCGSLQAVVT VVLCAAGAGLGQLLAGRADTGLAGAGVCTGLYAAWLTLGLTRGRGVMPITSDRGVLYA LLNALMAAYQPAVGFACLAGGALGGVAGTLLAPLLARVLYTCTAVTAAVALSLARAAL ETVRLGLGVVLALLVATFRAAGEVARTVRGL" gene 52082..54728 /locus_tag="MNEG_0014" mRNA join(52082..52095,52270..52395,52598..52677,52911..52981, 53197..53283,53393..53531,53706..53811,54096..54199, 54424..54560,54678..54728) /locus_tag="MNEG_0014" /product="hypothetical protein" CDS join(52082..52095,52270..52395,52598..52677,52911..52981, 53197..53283,53393..53531,53706..53811,54096..54199, 54424..54560,54678..54728) /locus_tag="MNEG_0014" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07941.1" /translation="MQSARISSPAADWITDNLGDGYVVREKFLGGSGWSSTYIYTTEA GAEYFVKTSGGAKAEGMFKGEALGLKAMFDTNTVRIPDVHHVGLLPDARGAFIVMEYL RLEGGGSQAELGRQMALMHLAEPTDPNAKAGKFGFAVDNTIGATPQPNEWMDDWVEFY RERRLRHQLDLLGDARMKALAQPVLDNLGFWFTDIAGSIRPSILHGDLWSGNVSSSGG RPVIFDPATYYGHAEAEWGMSWCAGFSGAFWQGYFEVAPKAPLFDQRRDLYTLYHILN HANLFGGGYNSQAQTILQRLNEQLKRSQ" gene complement(57571..58381) /locus_tag="MNEG_0015" mRNA complement(join(57571..57827,58036..58381)) /locus_tag="MNEG_0015" /product="hypothetical protein" CDS complement(join(57571..57827,58036..58381)) /locus_tag="MNEG_0015" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07942.1" /translation="MSDTRSMPAVLPFSVDTWTTETASKAQFLTHAHKDHTVGISQNA RHMYCTATTLHLLRIKFPELAAAIDRGDVQVTVLRDPGDSAIGDTLHLWSAGACGGYP YSVTPLFLANHCAGAVMLLFESEVWGSILHTGDCRVTSRQLPDLAAALDELLGEGPHL GLLCLDVTAGGGQDGADTLVCGWAQGSCAVIMLTGALPQL" gene 59620..65096 /locus_tag="MNEG_0016" mRNA join(59620..59654,59995..60077,60270..60979,61274..61569, 61767..63311,63493..63899,64169..64382,64580..65096) /locus_tag="MNEG_0016" /product="hypothetical protein" CDS join(59620..59654,59995..60077,60270..60979,61274..61569, 61767..63311,63493..63899,64169..64382,64580..65096) /locus_tag="MNEG_0016" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07943.1" /translation="MLLCENDKSALSDELRQRDTKGDFPFYCTSCSEAGFHVPEAPVG AGRSRKRRHARRGSGSGDDEDDEDYQGQEGGEEEGEQGLNAEQQHEDEEGEDEPDAGE VMEDVAPVARQPQSDRAESKPSHHRVAAPPHSSAAAPAASGRGGARSAARGRGRGRGA GRSVGGEAVVRGDRLDRWAARRAAEERKLRRGTEAARAGHTGPALGTAVADEIVTPLR PNGASGGGGSGGAPAAARRDNLAATRGRPLSAGSVKLWEGTLELVSARDVVEGVKLRK PIVVSKARIDVGPDCNRRALAPFEAALRRHAAIEPSGAAGAAGVTRGAAQGGRRLTAY VGKAVAVGEAFARELGRTEDFDVTAFKVTFPAASSVKEGLMAFGCGASTHWVVLPLEG VPHPLLFTVRQHDLGLMCMHPKDAATAARVFRQLSRYGDAAPWAPALPTNAADDGYQA QTAGAQQRLQQAQQHAQQLAQQGPGGMVQEGSRQMAWDESNAHDAARRAATHPVSWAW EPASPASPGPATSDRTGAGREGRGDSLMTAQEEAGSEEAASDAAGAEEAGAGGYVGGS STDSDSTGSTERLEGLARGRRRGGPHEVVELVESEDGAQGGQWQHGSGGVLRQQRGQG ALPDEAGGTAEDGDEAEGVAPTQALDGDAMELDEEGWGEQQEQQEQHEQQEQRQQPSV SSDIEAEDAAPSGSPACAAPQLDSLMALFNTRSAGEQEPGRHGGQADSLHKGAEGSAR AHEHARPAALGVQSPDGTLLASHAARTPGMGRHGRTAANIVQQQQQQQQQQQQQQANA SRATGLAPLSIERGPGESPGYQRAVESSGVQQLLDSGVAAGPGGLALSRLMPGVETLW QSGGGGWRPFRVLLLGFGGGSDAHDDALTDGLEECRRLGAHVFCSLPDLRAAVRLQRA THGPGTPTVLVLPRRLGPAGIRHALEAAAAPLGRGGGEADGPDQQAAAPLPPWWQVLA TLAQPALVFYEAPGEGEGLMTLARLWRGDGRPPPSEDRPSWAAALARCQLHACGISLV ACEVALQHATPASMARLLSLLARCRSLARAAPADFHLAVRRCDLDNLGHRNAAVAGVL AAREHADAVLLLEDLLGEGDPEAGHQAGDGDVDSPGHPATLPSSRGDVLPRHLATASL GLEGGEPDVVQDAVHLAWLRRRQLRLVVVLVPDAADVDDSRHHQTSAGCPDSNGRAHS GDGSELGGDQRRAVSHEHAEVALAALRAVPRHGSVLAGSWDQTLRLLVSIADSTEQEQ QQQQQH" gene 66323..68874 /locus_tag="MNEG_0017" mRNA join(66323..66365,66486..66550,66757..66831,66960..67226, 67427..67501,67842..68027,68159..68192,68340..68478, 68715..68874) /locus_tag="MNEG_0017" /product="hypothetical protein" CDS join(66323..66365,66486..66550,66757..66831,66960..67226, 67427..67501,67842..68027,68159..68192,68340..68478, 68715..68874) /locus_tag="MNEG_0017" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07944.1" /translation="MGKHSRSPSPSGSDSSEHRHKHKRHKQKKEKHKKDKSKKQKRAS PDRDKERLEAARAFLQQVLKQGGGGDAAAAAAAAVFAAEKQVANAATAADGGSGDKAS DKAEQKRQRRRQERPPKPKPPGVGDITAADYFSRAAEFTAWLQEDRVLYFNELGGDEA RSLFVEFVEDWNGGHGLVLAPTKRTTHEWGFTAKGGGGRGGSMSALMADQQQQRHEGQ LAAREAEGREKRKWRSDQKDLLDEMLPKATGREALVEKRMARREAAKAREDSPEMMRV TGGGDVMGGDDSFAAAKAREASYNARRNQRDLAKREQLTQKLSAAQEAEAAKMAQFRA LLAHGPISIPKRQ" gene complement(71613..73544) /locus_tag="MNEG_0018" mRNA complement(join(71613..72512,72809..73119,73322..73544)) /locus_tag="MNEG_0018" /product="hypothetical protein" CDS complement(join(71613..72512,72809..73119,73322..73544)) /locus_tag="MNEG_0018" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07945.1" /translation="MTWNEGHSWTLDIPLPAGKVTFKVVMQEANGGVRWETSTGNRAV TLPATTDAATPVGSVGVACSWGEISDTRVKALPDRSFLRSRLDALEGRASALRHQQSR TVLLSGPTHSAPSVPDGEVGLAGTAWTPGAAVPSGVGERALGATVDQLLQVAHEALDR GDSSAGAIALGAAECEAEEPTSLSRCCILLAVSQAATAALENQVNLAAAWAASKTQAS LLADEPAAPVGPAMPQLRDSVFSDEAPPATTSPQTAAGQAGKDPAGPAAALVPTPEDQ GGALMFSADSLRAEVDPHVMLRAVLERTTRSAAGATSAPAAAAAAYLETELRSTPTEV EAPPPEVQHSSAPQTAEVPAAGRVATVAAASNVVLSVDAQSSTGTAVARPTQVVPAPS GAGPQRQQLQSLLGGIEAKADACRTLTAQIAQGRAAKRDAALEVAAAPTVATIASLND GLFAARASALAVVVAMLMSSAGRRMGA" gene 75899..77678 /locus_tag="MNEG_0019" mRNA join(75899..76040,76285..76378,76656..76855,77056..77159, 77352..77558,77673..77678) /locus_tag="MNEG_0019" /product="hypothetical protein" CDS join(75899..76040,76285..76378,76656..76855,77056..77159, 77352..77558,77673..77678) /locus_tag="MNEG_0019" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07946.1" /translation="MLGWLGGSIALVVFCGVTLWCSFMLSDMYEVDGRKHGTYGDAVI SVLGRGSAVAVTVCQLSNLVLSSIGYSVAAGESMKMVVHSHCDVRDTGCGSTVWQMSI VFGITQLFFSQMPTLESAWWSSMVGAAMSVLYSTAALGMGAASVGRKLEPRVKAFGVF NALGAIAFAYSFSAVLLEVQDTIHEPPKSKLTMRRAVGASMAVTFVFYVGVGFVGYAA LGDATPGNILTGFNSPKALVTAANAMVLVHMK" gene complement(79067..80245) /locus_tag="MNEG_0020" mRNA complement(join(79067..79153,79376..79720,79901..79990, 80201..80245)) /locus_tag="MNEG_0020" /product="Carotene biosynthesis-related protein CBR" CDS complement(join(79067..79153,79376..79720,79901..79990, 80201..80245)) /locus_tag="MNEG_0020" /codon_start=1 /product="Carotene biosynthesis-related protein CBR" /protein_id="KIZ07947.1" /translation="MAALIARPLALKALKANRAQKCSGRRIAVCRAENKPQETINYGG QSYTPAEWEAAKASGNLPTAEPVPVAAASTPAPVGFSSLMAFSGPAPELINGRLAMLG VVAAIAAELASGESVLKQVSDEPTGIVFAFGIFIAASFAPLLSNVLPSAESVGPFNAK AELINGRAAMIGFAALLAIELAKGSALF" gene complement(80641..81890) /locus_tag="MNEG_0021" mRNA complement(join(80641..80705,80857..81022,81189..81295, 81522..81591,81801..81890)) /locus_tag="MNEG_0021" /product="diaminohydroxyphosphoribosylaminopyrimidine deaminase" CDS complement(join(80641..80705,80857..81022,81189..81295, 81522..81591,81801..81890)) /locus_tag="MNEG_0021" /EC_number="1.1.1.193" /codon_start=1 /product="diaminohydroxyphosphoribosylaminopyrimidine deaminase" /protein_id="KIZ07948.1" /db_xref="InterPro:IPR004794" /translation="MNRALDLAMLAFGKTHPNPHVGCVIVRDGQVVGEGYHPKAGQPH AEVWALRGAGQAAQGATAYVTLEPCNHYGRTPPCSQALVEAGVKRVVVGAGDPNPLVA AAGIATLQSAGIEVALMDGAENQRAKDINTEFLARMEEEAAIEMARLQALAKSREAAG AQHSD" gene complement(<98719..99006) /locus_tag="MNEG_0022" mRNA complement(<98719..99006) /locus_tag="MNEG_0022" /product="hypothetical protein" CDS complement(<98719..99006) /locus_tag="MNEG_0022" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07949.1" /translation="MAAAAAAHALAGTHRYRTTDIESDASSFEDLLLPKPLVHALAEA GFQRPSPVQKVAIPLGMVGTDLIVQAKSGTGKTCVFAVIALQRIKSDVTTPQ" gene complement(101113..103211) /locus_tag="MNEG_0023" mRNA complement(join(101113..101289,101455..101794, 102145..102353,102603..102848,103092..103211)) /locus_tag="MNEG_0023" /product="hypothetical protein" CDS complement(join(101113..101289,101455..101794, 102145..102353,102603..102848,103092..103211)) /locus_tag="MNEG_0023" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07950.1" /translation="MIGLIGVMGGAAALEIRRLRHHRGQDDKDGQVKELKKTVEQYAK ELEQERRVAAAAAERANALAAEADGLRRDTDHLRGAAESLGRNKEELAQQNAQLLLTN LKLKDESQQLVEANRLLTEKMTELSAEREAEAAHFAAELAALRDRVAGVLQRMFSSEI DEGAAVEALRELGCEVTFVPDTTARTEQSHTSASQRAMQATLNISGASSTSGASTPRF TLSWLGGAPESTGLGTSSANAAVQQQGVEQQLVKIAQAKAASDVPRGGGDNCKDENVT SGGSLGKSVNRSNGCVEQGGNLVFASQAKGTSTKSRLGLSLTDASGIFGSSKKGASVS SGRFDQAMVAGQEDTGSDLSGSKDLVARK" gene complement(104408..105316) /locus_tag="MNEG_0024" mRNA complement(join(104408..104540,104797..104990, 105138..105181,105286..105316)) /locus_tag="MNEG_0024" /product="hypothetical protein" CDS complement(join(104408..104540,104797..104990, 105138..105181,105286..105316)) /locus_tag="MNEG_0024" /codon_start=1 /product="hypothetical protein" /protein_id="KIZ07951.1" /translation="MLAQKTAHCTGVAKRPGPLHGARPRLFSFGAKKSKEAPTKRPTV VPSPSFNVPLGLLVISGLSAYEGVTPLAGIAGLLGVFLAIQATRVKFVFDDVGLEVVI AGKEEEETENKFVGGRNRWSYDSFINWVGNL" CONTIG join(AYTC01000001.1:1..48618,gap(179),AYTC01000002.1:1..58187) //