LOCUS KJ669987 2583 bp RNA linear VRL 25-JUN-2014 DEFINITION HIV-1 isolate C133_19051992_C9 from Netherlands envelope glycoprotein gene, partial cds. ACCESSION KJ669987 VERSION KJ669987.1 KEYWORDS . SOURCE Human immunodeficiency virus 1 (HIV-1) ORGANISM Human immunodeficiency virus 1 Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus. REFERENCE 1 (bases 1 to 2583) AUTHORS Gijsbers,E.F., van Nuenen,A.C., Torrents de la Pena,A., Bowles,E.J., Stewart-Jones,G.B., Schuitemaker,H. and Kootstra,N.A. TITLE Low level of HIV-1 evolution after transmission from mother to child JOURNAL Sci Rep 4, 5079 (2014) PUBMED 24866155 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2583) AUTHORS Gijsbers,E.F., van Nuenen,A.C., Torrents de la Pena,A., Bowles,E.J., Stewart-Jones,G.B., Schuitemaker,H. and Kootstra,N.A. TITLE Direct Submission JOURNAL Submitted (04-APR-2014) Experimental Immunology, Academic Medical Center, University of Amsterdam, Meibergdreef 15, Amsterdam 1105AZ, The Netherlands COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar Lasergene Seqman v. 8 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2583 /organism="Human immunodeficiency virus 1" /mol_type="genomic RNA" /isolate="C133_19051992_C9" /host="Homo sapiens" /db_xref="taxon:11676" /geo_loc_name="Netherlands" /collection_date="19-May-1992" CDS 1..>2583 /note="Env gp160" /codon_start=1 /product="envelope glycoprotein" /protein_id="AID55860.1" /translation="MRVMGIKKNYQHLWKWGTMLLGILMICNVAGNLWVTVYYGVPVW KEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIVLTNVTENFNMWKNNMVEQ MHEDIISLWDQSLKPCVKLTPLCVTLNCTELRNTTNTNSSSGRMEGGEMKNCSFNITT GIRDKVKKEHALFYKLDIVPIGNDNTSNRFGNTSYRLISCNTSVITQACPKVSFEPIP IHYCAPAGFAILKCNDQKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVI RSANFTDNVKVIIVQLNESVEINCTRPNNNTRKSIHIGPGKAFYTTGDIIGDIRQAHC NISRAKWNDTLKKIVIKLREQFGNKTIVFNRSSGGDPEIVMHSFNCGGEFFYCNSTQL FNSTWNNNSTWNGIEGSNNTVGSETITLPCRIKQIINMWQEVGKAMYAPPISGPIRCL SNITGLILTRDGGNNINTTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKR RVVQREKRAVGIGAIFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEA QQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKSL EQIWENMTWMEWEREIDNYTGLIYTLIEESQNQQEKNEQELLELDKWASLWNWFDITN WLWYIKIFIMIVGGLVGLRIIFTVISIVNRVRQGYSPLSFQTRPPAPRGPDRPEGIEE EGGGRDRDTSRPLVDGFLALIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEVL KYWWSLLQYWSQELKKSTISLLNATAIAVAEGTDRVIEVLQRAYRAIIHIPVRIRQGL ERALL" BASE COUNT 905 a 434 c 611 g 633 t ORIGIN 1 atgagagtga tggggatcaa gaagaattat cagcacttgt ggaaatgggg caccatgctc 61 cttgggatat taatgatctg taatgttgca ggaaatttgt gggtcacagt ctattatggg 121 gtacctgtgt ggaaagaagc aaccaccact ctattttgtg catcagatgc taaagcatat 181 gatacagagg tacataatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca 241 caagaaatag tattgacaaa tgtgacagaa aattttaaca tgtggaaaaa taacatggta 301 gaacagatgc atgaggatat aattagttta tgggatcaaa gcctaaagcc atgtgtaaaa 361 ttaaccccac tctgtgttac tctaaattgc actgaattga ggaatactac taataccaat 421 agtagtagtg ggaggatgga gggaggagaa atgaaaaatt gctctttcaa tatcaccaca 481 ggaataagag ataaggtgaa gaaagaacat gcactttttt ataaacttga tatagtacca 541 ataggaaatg ataatactag caataggttt ggtaatacta gctataggtt gataagttgt 601 aacacctcag tcattacaca ggcctgtcca aaggtatcct ttgagccaat tcccatacat 661 tattgtgccc cggctggttt tgcgattctg aagtgtaatg atcagaagtt caatggaaca 721 ggaccatgta aaaatgtcag cacagtacaa tgtacacatg gaattaggcc agtagtatca 781 actcaactgc tgttaaatgg cagtctagca gaagaagagg tagtaattag atcagccaat 841 ttcactgaca atgttaaagt cataatagta cagctgaatg aatctgtaga aattaattgt 901 acaagaccca acaacaatac aagaaaaagt atacatatag gaccaggcaa agcattttat 961 acaacaggag acataatagg agatataaga caagcacatt gtaacattag tagagcaaaa 1021 tggaatgaca ctttaaaaaa gatagttata aaattaagag aacaatttgg gaataaaaca 1081 atagttttta atcgatcctc aggaggggac ccagaaattg taatgcacag ttttaattgt 1141 ggaggggaat ttttctactg taattcaaca caactattta atagtacttg gaataataat 1201 agcacttgga atggtattga agggtcaaat aacactgtag gaagtgagac gatcacactc 1261 ccatgcagaa taaaacaaat tataaacatg tggcaggaag taggaaaagc aatgtatgcc 1321 cctcccatca gcggaccaat tagatgttta tcaaatatta cagggctgat attaacaaga 1381 gacggcggta ataacataaa cacaacgaca gagactttca gacctggagg tggagatatg 1441 agggacaatt ggagaagtga actatataaa tataaagtag taaaaattga accattagga 1501 atagcaccca ccaaggcaaa gagaagagtg gtgcagagag aaaaaagagc agtgggaata 1561 ggagctatat tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcaatg 1621 acgctgacgg tacaggccag acaattattg tctggtatag tgcaacagca gaacaatttg 1681 ctgagggcta ttgaggcgca acagcatctg ttgcaactca cagtctgggg catcaaacag 1741 ctccaggcaa gagtcctggc tgtggaaaga tacctaaagg atcaacagct cctggggatt 1801 tggggttgct ctggaaaact catttgcacc actgctgtgc cttggaatac tagttggagt 1861 aataaatctc tggagcagat ttgggaaaac atgacctgga tggagtggga aagagaaatt 1921 gataattaca caggcttaat atacacctta attgaagaat cgcaaaacca acaagaaaag 1981 aatgaacaag aattattgga attagataaa tgggcaagtt tgtggaattg gtttgacata 2041 acaaactggc tgtggtatat aaaaatattc ataatgatag taggaggctt ggtaggttta 2101 agaataattt ttactgtaat ttctatagtg aatagagtta ggcagggata ctcacctttg 2161 tcgttccaga cccgcccccc agctccgagg ggacccgaca ggcccgaagg aatcgaagaa 2221 gaaggtggag ggagagacag agacacatcc agaccactag tggatggatt cttagcactt 2281 atctgggtcg acctgaggag cctgtgcctc ttcagctacc accgcttgag agacttactc 2341 ttgattgtaa cgaggattgt ggaacttctg ggacgcaggg ggtgggaagt cctcaaatat 2401 tggtggagtc tcctacagta ttggagtcag gaactgaaga aaagtaccat tagcttgctc 2461 aacgccacag ccatagcagt agctgaggga actgataggg ttatagaagt attacaaaga 2521 gcttatagag ctattatcca catacctgta cgaataagac agggcttaga aagggctttg 2581 cta //