LOCUS       KJ639186                2093 bp    DNA     linear   PLN 05-FEB-2016
DEFINITION  Pythium ultimum var. ultimum strain DAOM BR840 cytochrome c oxidase
            subunit 2 (COII) and cytochrome c oxidase subunit 1 (COI) genes,
            partial cds; mitochondrial.
ACCESSION   KJ639186
VERSION     KJ639186.1
KEYWORDS    .
SOURCE      mitochondrion Globisporangium ultimum var. ultimum
  ORGANISM  Globisporangium ultimum var. ultimum
            Eukaryota; Sar; Stramenopiles; Oomycota; Pythiales; Pythiaceae;
            Globisporangium.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Eggertson,Q.A. and Levesque,C.A.
  TITLE     Examining mitochondrial and nuclear gene tree conflict in species
            level analysis of Pythium ultimum
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Eggertson,Q.A. and Levesque,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2014) Agriculture and Agri-Food Canada,
            Biodiversity, 960 Carling Avenue, Ottawa, ON K1A 0C6, Canada
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: Lasergene v. 9
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Globisporangium ultimum var. ultimum"
                     /organelle="mitochondrion"
                     /mol_type="genomic DNA"
                     /strain="DAOM BR840"
                     /variety="ultimum"
                     /isolation_source="soil"
                     /culture_collection="DAOM:BR840"
                     /db_xref="taxon:2052683"
                     /geo_loc_name="USA: California"
                     /note="genotype: U7"
     gene            <1..674
                     /gene="COII"
     CDS             <1..674
                     /gene="COII"
                     /codon_start=3
                     /product="cytochrome c oxidase subunit 2"
                     /protein_id="AJG06576.1"
                     /translation="INFHHDLMFFLIVVTVFVCWMLFRVITLFDEKKNKIPSTVVHGA
                     TIEIIWTTIPALILLTVAVPSFALLYSMDEVIDPIITLKVIGSQWYWSYEYSDNLEFS
                     DEPLIFDSYMVQENDLEIGQFRLLEVDNRVVVPTNSHIRVLITASDVLHSWAIPSLGV
                     KLDACPGRLNQTSMFIKREGVFYGQCSEICGVNHGFMPIVIEAVSLEDYLTWLKNKIN
                     FDFNA"
     gene            870..>2093
                     /gene="COI"
     CDS             870..>2093
                     /gene="COI"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 1"
                     /protein_id="AJG06577.1"
                     /translation="MNFQSINNWSTRWLFSTNHKDIGTLYLIFGAFSGVVGTTLSILI
                     RMELAQPGNQIFMGNHHLYNVVVTAHAFIMIFFMVMPVLIGGFGNWFVPLMIGAPDMA
                     FPRMNNISFWLLPPSLLLLVSSAIVESGAGTGWTVYPPLSSVQAHSGPSVDLAIFSLH
                     LSGISSLLGAINFLSTIYNMRAPGLSFHRLPLFVWAIFITAFLLLLTLPVLAGAITML
                     LTDRNLNTSFYDPSGGGDPVLYQHLFWFFGHPEVYVLILPAFGIVSHVTATFSKKNVF
                     GYLGMVYAMLSIGLLGSIVWAHHMFTVGLDVDTRAYFSAATMIIAVPTGIKIFSWLAT
                     MWGGSLKFETPMLFTLGFLLLFVIGGVTGVIMATSGLDIAIHDTYYIVAHFHYVLSMG
                     AVFGIFAGFYYWIGKI"
BASE COUNT          624 a          226 c          331 g          912 t
ORIGIN      
        1 ttattaactt tcatcatgat ttaatgtttt ttttaatcgt tgtaactgtt tttgtttgtt
       61 ggatgttatt tagagttatt actctttttg atgaaaaaaa aaataaaata ccttcaactg
      121 ttgtacatgg tgctactatt gaaattattt ggactacaat accagcttta attttattaa
      181 ctgtagctgt tccatcattt gctttattat attcaatgga tgaagtaatt gatcctatta
      241 ttactttaaa agtaattggt agtcaatggt attggagtta tgaatattct gataatttag
      301 agttttcaga tgaaccttta atttttgata gttatatggt acaagaaaat gatttagaaa
      361 taggtcaatt tagactttta gaagtagata atcgtgtagt tgttccaact aatagccata
      421 ttagagtatt aattacagct tctgatgttt tacattcatg ggcgatacct tcattaggtg
      481 ttaaattaga tgcttgtcct ggtcgtttaa atcaaacttc tatgtttatt aaaagagaag
      541 gtgtttttta tggtcaatgt agtgaaattt gtggagtaaa tcatggattt atgcctatag
      601 ttattgaagc agtttcatta gaagattatt taacatggtt aaaaaataaa attaattttg
      661 attttaatgc ataattaaaa aattttatgt tttttaaaat aataggtaca ttaattataa
      721 tattgttatt attttctgat attaaaaata ttaaaaataa aattaaacaa tattttaata
      781 aataatatat aaaaagacca gtgctctttt ttaatttatc ttaataaaaa tagtaatttt
      841 taatttaaaa aatatttaaa tatttaaaaa tgaattttca aagtataaat aattggtcaa
      901 ctagatggct tttttcaaca aatcataaag acattggtac tttatattta atttttggtg
      961 ctttttcagg tgtagttggt actacattat ccattttaat tagaatggaa ttagcacaac
     1021 ctggtaatca aattttcatg ggtaatcatc atttatataa tgttgttgtt actgcacatg
     1081 catttattat gatttttttt atggttatgc ctgttttaat cggtggtttt ggtaactggt
     1141 ttgtaccttt aatgattggt gctccagata tggcttttcc tcgtatgaat aatattagtt
     1201 tttggttatt accaccatct ttattattat tagtatcttc agctatagtt gaatctggag
     1261 caggtacagg ttggactgta tatccacctt tatctagtgt acaagcacat tcaggtcctt
     1321 cagtagattt agctattttt agtttacatt tatcaggtat ttcatcttta ttaggtgcta
     1381 ttaatttttt atctactatt tataatatga gagcacctgg tttaagtttt catagattac
     1441 ctttatttgt ttgggctatt tttattacag cttttttatt attattaact ttacctgtat
     1501 tagctggtgc aattactatg ttattaactg atagaaattt aaatacatct ttttatgatc
     1561 cttctggagg aggagatcca gtattatatc aacatttatt ttggtttttt ggtcatccag
     1621 aagtttatgt attaatttta ccagcttttg gtattgttag tcatgttact gctacttttt
     1681 ctaaaaaaaa tgttttcggt tatttaggta tggtttacgc tatgttatct attggtttat
     1741 taggttctat tgtatgggct catcatatgt ttactgtagg tctagatgta gatactagag
     1801 cttatttctc agcagctact atgattattg cagtacctac tggtattaaa atttttagtt
     1861 ggttagctac tatgtggggc ggttcattaa aatttgaaac tcctatgtta tttactttag
     1921 gttttttatt attatttgtt ataggtggag taactggtgt tattatggct acttctggtt
     1981 tagatatcgc tattcatgat acttattata ttgtagcaca ttttcattat gtattatcta
     2041 tgggtgctgt atttggtatt tttgcaggtt tttattattg gataggtaaa att
//