LOCUS       KJ534769                1644 bp    mRNA    linear   HTC 14-APR-2014
DEFINITION  Homo sapiens clone ALDH5A1_iso-A_fetal-F11 aldehyde dehydrogenase 5
            family member A1 isoform A (ALDH5A1) mRNA, partial cds,
            alternatively spliced.
ACCESSION   KJ534769
VERSION     KJ534769.1
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Corominas,R., Yang,X., Lin,G.N., Kang,S., Shen,Y., Ghamsari,L.,
            Broly,M., Rodriguez,M., Tam,S., Trigg,S.A., Fan,C., Yi,S.,
            Tasan,M., Lemmens,I., Kuang,X., Zhao,N., Malhotra,D.,
            Michaelson,J.J., Vacic,V., Calderwood,M.A., Roth,F.P.,
            Tavernier,J., Horvath,S., Salehi-Ashtiani,K., Korkin,D., Sebat,J.,
            Hill,D.E., Hao,T., Vidal,M. and Iakoucheva,L.M.
  TITLE     Protein interaction network of alternatively spliced isoforms from
            brain links genetic risk factors for autism
  JOURNAL   Nat Commun 5, 3650 (2014)
   PUBMED   24722188
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Corominas,R., Yang,X., Lin,G.N., Kang,S., Shen,Y., Ghamsari,L.,
            Broly,M., Rodriguez,M., Tam,S., Trigg,S.A., Fan,C., Yi,S.,
            Tasan,M., Lemmens,I., Kuang,X., Zhao,N., Malhotra,D.,
            Michaelson,J.J., Vacic,V., Calderwood,M.A., Roth,F.P.,
            Tavernier,J., Horvath,S., Salehi-Ashtiani,K., Korkin,D., Sebat,J.,
            Hill,D.E., Hao,T., Vidal,M. and Iakoucheva,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAR-2014) Department of Psychiatry, University of
            California San Diego, 9500 Gilman Drive, MC0603, La Jolla, CA
            92093, USA
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: GMAP v. 2012_07_20; SAMTool v. 0.1.8;
                                     Phred v. 0.020425.C; CAP3 v. 10/2011
            Sequencing Technology :: Sanger dideoxy sequencing; 454
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="ALDH5A1_iso-A_fetal-F11"
                     /tissue_type="fetal whole brain"
     gene            1..>1644
                     /gene="ALDH5A1"
                     /gene_synonym="SSADH"
                     /gene_synonym="SSDH"
                     /db_xref="GeneID:7915"
     CDS             1..>1644
                     /gene="ALDH5A1"
                     /gene_synonym="SSADH"
                     /gene_synonym="SSDH"
                     /note="alternatively spliced"
                     /codon_start=1
                     /product="aldehyde dehydrogenase 5 family member A1
                     isoform A"
                     /protein_id="AHW56409.1"
                     /db_xref="GeneID:7915"
                     /translation="MATCIWLRSCGARRLGSTFPGCRLRPRAGGLVPASGPAPGPAQL
                     RCYAGRLAGLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAV
                     RAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYS
                     AFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA
                     LAAGCTVVVKPAEDTPFSALALAEVNQGFLLDLDPLLLASQAGIPSGVYNVIPCSRKN
                     AKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANV
                     DQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTT
                     QGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHE
                     ETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEG
                     LISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL"
BASE COUNT          355 a          431 c          491 g          367 t
ORIGIN      
        1 atggcgacct gcatttggct gcggagctgt ggggcccggc gcctcgggtc gacgtttcca
       61 ggctgccgcc tccgcccccg cgccggcggc ctggtccctg cctccgggcc tgcgcccggc
      121 ccggcccagc tccgctgcta cgctgggcgc ctggcgggcc tctctgcggc gctgctgcgc
      181 accgacagct tcgtgggcgg ccgctggctc ccggccgccg ccaccttccc cgtgcaagac
      241 ccggccagcg gcgccgctct gggcatggta gccgactgcg gggtgcgaga ggcccgcgcc
      301 gccgtgcgcg ctgcctacga ggctttctgc cgctggaggg aggtctccgc caaggagagg
      361 agttcattac ttcggaagtg gtacaattta atgatacaaa ataaggatga ccttgccaga
      421 ataatcacag ctgaaagtgg aaagccactg aaggaggcac atggagaaat tctctattcc
      481 gcctttttcc tagagtggtt ctctgaggaa gcccgccgtg tttacggaga cattatccac
      541 accccggcaa aggacaggcg ggccctggtc ctcaagcagc ccataggcgt ggctgcagtc
      601 atcaccccgt ggaatttccc cagtgccatg atcacccgga aggtgggggc cgccctggca
      661 gccggctgta ctgtcgtggt gaagcctgcc gaagacacgc ccttctccgc cctggccctg
      721 gctgaggtaa atcagggatt tcttcttgat ttggatccat tgttgcttgc aagccaggct
      781 gggattcctt caggtgtata caatgttatt ccctgttctc gaaagaatgc caaggaagta
      841 ggggaggcaa tttgtactga tcctctggtg tccaaaattt cctttactgg ttcaacaact
      901 acaggaaaga tcctgttgca ccacgcagca aactctgtga aaagggtctc tatggagctg
      961 ggcggccttg ctccatttat agtatttgac agtgccaacg tggaccaggc tgtagcaggg
     1021 gccatggcat ctaaatttag gaacactgga cagacttgtg tttgctcaaa ccaattcttg
     1081 gtgcaaaggg gcatccatga tgcctttgta aaagcattcg ccgaggccat gaagaagaac
     1141 ctgcgcgtag gtaatggatt tgaggaagga actactcagg gcccattaat taatgaaaaa
     1201 gcggtagaaa aggtggagaa acaggtgaat gatgccgttt ctaaaggtgc caccgttgtg
     1261 acaggtggaa aacgacacca acttggaaaa aatttctttg agcctaccct gctgtgcaat
     1321 gtcacccagg acatgctgtg cactcatgaa gagactttcg ggcctctggc accagttatc
     1381 aagttcgata cagaggagga ggctatagca atcgctaacg cagctgatgt tgggttagca
     1441 ggttattttt actctcaaga cccagcccag atctggagag tggcagagca gctggaagtg
     1501 ggcatggttg gcgtcaacga aggattaatt tcctctgtgg agtgcccttt tggtggagtg
     1561 aagcagtccg gccttgggcg agaggggtcc aagtatggca ttgatgagta tctggaactc
     1621 aagtatgtgt gttacggggg cttg
//