LOCUS       KF478778                1093 bp    DNA     linear   PLN 07-MAY-2014
DEFINITION  Echinochloa crus-galli clone Alu22-C2-7_22 antimicrobial peptide
            precursor, gene, partial cds.
ACCESSION   KF478778
VERSION     KF478778.1
KEYWORDS    .
SOURCE      Echinochloa crus-galli
  ORGANISM  Echinochloa crus-galli
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Panicodae; Paniceae; Boivinellinae;
            Echinochloa.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Ryazantsev,D.Y., Rogozhin,E.A., Dimitrieva,T.V., Drobyazina,P.E.,
            Khadeeva,N.V., Egorov,T.A., Grishin,E.V. and Zavriev,S.K.
  TITLE     A novel hairpin-like antimicrobial peptide from barnyard grass
            (Echinochloa crusgalli L.) seeds: Structure-functional and
            molecular-genetics characterization
  JOURNAL   Biochimie 99, 63-70 (2014)
   PUBMED   24275143
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Ryazantsev,D.Y., Dimitrieva,T.V. and Zavriev,S.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2013) Group of Molecular Diagnostics, IBCH RAS,
            Miklukho-Maklaya, 16/10, Moscow 117997, Russia
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Echinochloa crus-galli"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:90397"
                     /clone="Alu22-C2-7_22"
     mRNA            <23..>1093
                     /product="antimicrobial peptide precursor"
     CDS             23..>1093
                     /codon_start=1
                     /product="antimicrobial peptide precursor"
                     /protein_id="AHB61275.1"
                     /translation="MGKGSSGGGAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSGRGSCRSQCM
                     RRHEDEPWRVQECVSQCRRRRGGGDDDVAVDACEGADRCRERCERRHRGDWQGKQRCL
                     MECRRREQEEDVDDRCPCPCRRQCERHGDPATRQRCVEACQRRREEERRHGGGDADEE
                     GSRGGRCERKCRRHSDWQTRQRCLQQCEQRERQEEGGRDDAGDGKDTYCADRCQSMCR
                     QRHRGDREMQRRCARKCEREEGCPRRRDATADAEEDDGNDRCSQQCQHHRDPDRKQQC
                     MRECRRHQGRGEDDDTGAGEDDS"
     sig_peptide     23..55
     mat_peptide     293..403
                     /product="antimicrobial peptide EcAMP1"
     mat_peptide     431..535
                     /product="antimicrobial peptide EcAMP3"
     mat_peptide     968..1060
                     /product="antimicrobial peptide EcAMP2-like protein"
     gap             56..289
                     /estimated_length=234
BASE COUNT          144 a          291 c          367 g           57 t
ORIGIN      
        1 agctaggggc gagggcgcgg ccatggggaa gggtagtagt gggggcggcg cgtggnnnnn
       61 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnng acggctccgg
      301 caggggctcg tgccggagcc agtgcatgcg ccgccacgag gacgagccgt ggcgggtcca
      361 ggagtgcgtc agccagtgcc gccgccgtcg tggcggcggc gacgacgacg tcgccgtcga
      421 cgcgtgcgag ggcgccgaca ggtgccggga gcggtgcgag cgccgccacc gcggggactg
      481 gcaggggaag cagcgctgcc tgatggagtg ccgccgccgc gagcaggagg aggacgtcga
      541 cgaccggtgc ccgtgcccgt gccggaggca gtgcgagcgc cacggcgacc cggccaccag
      601 gcagcgctgc gtcgaggcct gccagcgccg ccgcgaggag gagcgccgcc acggcggcgg
      661 cgacgccgac gaggagggca gccgcggcgg ccggtgcgag aggaagtgcc ggcgccacag
      721 cgactggcag acgaggcagc ggtgcctgca gcagtgtgag cagcgcgagc gccaggagga
      781 gggcggccgc gacgacgccg gcgacggcaa agacacctac tgcgccgacc ggtgccagag
      841 catgtgccgg cagcgccacc gcggcgaccg ggagatgcag cgccggtgcg cgaggaagtg
      901 cgagcgcgag gagggctgcc cccgccgccg cgacgccacc gccgacgccg aggaggacga
      961 cggcaacgac cgctgcagcc agcagtgcca gcaccaccgc gaccccgaca ggaagcagca
     1021 gtgcatgcgc gagtgccgcc gccaccaggg ccgcggcgag gacgacgaca ccggcgccgg
     1081 cgaggacgac agc
//