LOCUS       KF478772                1090 bp    DNA     linear   PLN 07-MAY-2014
DEFINITION  Echinochloa crus-galli clone Alu6-C2-7_6 antimicrobial peptide
            precursor, gene, partial cds.
ACCESSION   KF478772
VERSION     KF478772.1
KEYWORDS    .
SOURCE      Echinochloa crus-galli
  ORGANISM  Echinochloa crus-galli
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Panicodae; Paniceae; Boivinellinae;
            Echinochloa.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ryazantsev,D.Y., Rogozhin,E.A., Dimitrieva,T.V., Drobyazina,P.E.,
            Khadeeva,N.V., Egorov,T.A., Grishin,E.V. and Zavriev,S.K.
  TITLE     A novel hairpin-like antimicrobial peptide from barnyard grass
            (Echinochloa crusgalli L.) seeds: Structure-functional and
            molecular-genetics characterization
  JOURNAL   Biochimie 99, 63-70 (2014)
   PUBMED   24275143
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Ryazantsev,D.Y., Dimitrieva,T.V. and Zavriev,S.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2013) Group of Molecular Diagnostics, IBCH RAS,
            Miklukho-Maklaya, 16/10, Moscow 117997, Russia
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Echinochloa crus-galli"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:90397"
                     /clone="Alu6-C2-7_6"
     mRNA            <23..>1090
                     /product="antimicrobial peptide precursor"
     CDS             23..>1090
                     /codon_start=1
                     /product="antimicrobial peptide precursor"
                     /protein_id="AHB61269.1"
                     /translation="MGKGSSGGGAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLRQGSCRSQCM
                     RRHEDEPWRVQECVSQCRRRRGGGDDDVAVDACEGADRCRERCERRHRGDWQGKQRCL
                     MECRRREQEEDVDDRCPCPCRRQCERHGDPATRQRCVEACQRRREEERRHGGGDADEE
                     GSRGGRCERKCRRHSDWQTGQRCLQQCEQRERQEEGGRGDAGDGKDTYCADRCQSMCR
                     QRHRGDREMQRRCARKCEREESCPRRRDATADADEAEEDDGNDRCSQRCQHHRDPDRK
                     QQCMRECRRHQGRGDDDDTGAR"
     sig_peptide     23..55
     mat_peptide     293..403
                     /product="antimicrobial peptide EcAMP1"
     mat_peptide     431..535
                     /product="antimicrobial peptide EcAMP3"
     mat_peptide     977..1069
                     /product="antimicrobial peptide EcAMP2-like protein"
     gap             56..289
                     /estimated_length=234
BASE COUNT          140 a          290 c          368 g           58 t
ORIGIN      
        1 agctaggggc gagggcgcgg ccatggggaa gggtagtagt gggggcggcg cgtggnnnnn
       61 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnng gacggctccg
      301 gcagggctcg tgccggagcc agtgcatgcg ccgccacgag gacgagccgt ggcgggtcca
      361 ggagtgcgtc agccagtgcc gccgccgtcg tggcggcggt gacgacgacg tcgccgtcga
      421 cgcgtgcgag ggcgccgaca ggtgccggga gcggtgcgag cgccgccacc gcggggactg
      481 gcaggggaag cagcgctgcc tgatggagtg ccgccgccgc gagcaggagg aggacgtcga
      541 cgaccggtgc ccgtgcccgt gccggaggca gtgcgagcgc cacggcgacc cggccaccag
      601 gcagcgctgc gtcgaggcct gccagcgccg ccgagaggag gagcgccgcc acggcggcgg
      661 cgacgccgac gaggagggca gccgcggcgg ccggtgcgag aggaagtgcc ggcgccacag
      721 cgactggcag acggggcagc ggtgcctgca gcagtgtgag cagcgcgagc gccaggagga
      781 gggcggccgc ggcgacgccg gcgacggcaa ggacacctac tgcgccgacc ggtgccagag
      841 catgtgccgg cagcgccacc gcggcgaccg ggagatgcag cgccggtgcg cgaggaagtg
      901 cgagcgcgag gagagctgcc cccgccgccg cgacgccacc gccgacgccg acgaggccga
      961 ggaggacgac ggcaacgacc gctgcagcca gcggtgccag caccaccgcg accccgacag
     1021 gaagcagcag tgcatgcgcg agtgccgccg ccaccagggc cgcggcgacg acgacgacac
     1081 cggcgcccgg
//