LOCUS KB320859 5637327 bp DNA linear CON 19-MAR-2015 DEFINITION Tupaia chinensis unplaced genomic scaffold Scaffold000407_4, whole genome shotgun sequence. ACCESSION KB320859 ALAR01000000 VERSION KB320859.1 DBLINK BioProject: PRJNA169406 BioSample: SAMN01084043 KEYWORDS WGS. SOURCE Tupaia chinensis (Chinese tree shrew) ORGANISM Tupaia chinensis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia. REFERENCE 1 (bases 1 to 5637327) AUTHORS Zhang,G., Fan,Y., Yao,Y. and Huang,Z. TITLE Genome of the Chinese tree shrew, a rising model animal genetically related to primates JOURNAL Nat Commun (2013) In press REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 5637327) AUTHORS Zhang,G., Fan,Y., Yao,Y. and Huang,Z. TITLE Direct Submission JOURNAL Submitted (12-JUL-2012) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.05 Assembly Name :: TupChi_1.0 Genome Coverage :: 80x Sequencing Technology :: Illumina HiSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5637327 /organism="Tupaia chinensis" /mol_type="genomic DNA" /submitter_seqid="Scaffold000407_4" /db_xref="taxon:246437" /chromosome="Unknown" /sex="male" /geo_loc_name="China" assembly_gap 67414..67688 /estimated_length=275 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 101034..101064 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 137528..137771 /estimated_length=244 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 142247..142277 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 167507..167548 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 168205..168890 /estimated_length=686 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 169989..170627 /estimated_length=639 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 204981..204997 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 215620..216336 /estimated_length=717 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 243278..243308 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 244802..244832 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 249823..250988 /estimated_length=1166 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 252035..252167 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 288532..288541 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 290632..290966 /estimated_length=335 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 292141..292410 /estimated_length=270 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 306065..306610 /estimated_length=546 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 339883..340102 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 351947..351977 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 359397..359773 /estimated_length=377 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 369947..369957 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 389997..390027 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 403633..403842 /estimated_length=210 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 414094..414225 /estimated_length=132 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 450720..450940 /estimated_length=221 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 456306..456413 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 464095..464266 /estimated_length=172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 480431..480790 /estimated_length=360 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 481987..482017 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 487564..487741 /estimated_length=178 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 497678..497695 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <510629..>529458 /locus_tag="TREES_T100005507" mRNA join(<510629..510775,529231..>529458) /locus_tag="TREES_T100005507" /product="hypothetical protein" CDS join(510629..510775,529231..529458) /locus_tag="TREES_T100005507" /codon_start=1 /product="hypothetical protein" /protein_id="ELW61705.1" /translation="MPLSLFVHLEEQDEWAGGNEIGAGIPVALPFFPTLLIYHHIEGV ALCILHMACENVTSQEELHLSAPDQPSTTTASERLVYSLRPITNHVETWHYAYWRSES SPLGSNWKDIPRPATFDWKRRI" assembly_gap 516105..516273 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 526239..526318 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 531084..532986 /estimated_length=1903 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 550647..550794 /estimated_length=148 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 568781..568811 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 576596..576953 /estimated_length=358 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 586819..586835 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 590438..590468 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 591318..591354 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 594791..594837 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 612266..612296 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 624252..624438 /estimated_length=187 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 645241..645253 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 681072..681901 /estimated_length=830 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 685980..686094 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 687630..688145 /estimated_length=516 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 710790..710801 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 726087..726605 /estimated_length=519 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 734678..734992 /estimated_length=315 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 766811..767758 /estimated_length=948 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 772859..772963 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 773345..773588 /estimated_length=244 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 788653..788729 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 798114..799011 /estimated_length=898 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 804920..805092 /estimated_length=173 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 806107..806559 /estimated_length=453 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 827448..827478 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 845517..845563 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 850304..850314 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 856604..857038 /estimated_length=435 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 886986..887382 /estimated_length=397 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 890519..890563 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 899594..900094 /estimated_length=501 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 906706..907277 /estimated_length=572 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<915627..>920844) /locus_tag="TREES_T100005506" mRNA complement(join(<915627..915749,920290..>920844)) /locus_tag="TREES_T100005506" /product="Amiloride-sensitive cation channel 1, neuronal" CDS complement(join(915627..915749,920290..920844)) /locus_tag="TREES_T100005506" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005272 - sodium channel activity [Evidence IEA]; GO_process: GO:0006814 - sodium ion transport [Evidence IEA]" /codon_start=1 /product="Amiloride-sensitive cation channel 1, neuronal" /protein_id="ELW61706.1" /db_xref="InterPro:IPR001873" /db_xref="UniProtKB/Swiss-Prot:Q62962" /translation="MDLKESPSEGSLQPSSIQIFANTSTLHGIRHIFVYGPLTIRRVL WAVAFVGSLGLLLVESSERVSYYFSYQHVTKVDEVVAQSLVFPAVTLCNLNGFRFSRL TTNDLYHAGELLALLDVNLQIPDPHLADPMVLEALRQKANFKHYKPKQFSMLEFLHRV GHDLKDMMLYCKFKGQECGHQDFTTESYRMSNAIEDAILCVTFSLLSVCSMCVQANRG TTECRDK" assembly_gap 926698..926728 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 932481..932668 /estimated_length=188 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<963449..>989084) /locus_tag="TREES_T100005505" mRNA complement(join(<963449..964010,988978..>989084)) /locus_tag="TREES_T100005505" /product="60S ribosomal protein L6" CDS complement(join(963449..964010,988978..989084)) /locus_tag="TREES_T100005505" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="60S ribosomal protein L6" /protein_id="ELW61707.1" /db_xref="InterPro:IPR000915" /db_xref="UniProtKB/Swiss-Prot:Q02878" /translation="MSVQTHESTWDGPIHILSSEEFPGIFQMTGGLDGFRKVRYKRKY STTKSRIEKKKKVLATVTKPAGEDRNGGIWVAKFRKVPRYPTEDAPRKLLSHGKTPSS QRVRKLRASITPGTILIILTGRHRGKRVVFLKQLSSGLLLATGPLVLNRVPLGRTQKF VIATSTKIDISKVKIPKHLTNAYFKKKKLWKPRHQEGEIFDIEKEKYEISEQHKVDQK AVDS" assembly_gap 977212..977242 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1011385..>1012950 /locus_tag="TREES_T100005508" mRNA join(<1011385..1011460,1012273..1012387,1012776..>1012950) /locus_tag="TREES_T100005508" /product="C-C motif chemokine 2" CDS join(1011385..1011460,1012273..1012387,1012776..1012950) /locus_tag="TREES_T100005508" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 2" /protein_id="ELW61708.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:P28292" /translation="MKVSAALLCLLLTAAAFSPPVLAQPEGVNSPRTCCYEFNNKKIP MQRLKSYSRVNTNCPKEAVIFKTKLDKQVCADPKQKWVQDYIAYLDKKMQTTTPLPLS TLATVTNASISNVSLAPSV" gene <1024338..>1025832 /locus_tag="TREES_T100005509" mRNA join(<1024338..1024413,1025181..1025295,1025727..>1025832) /locus_tag="TREES_T100005509" /product="C-C motif chemokine 2" CDS join(1024338..1024413,1025181..1025295,1025727..1025832) /locus_tag="TREES_T100005509" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 2" /protein_id="ELW61709.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:P28292" /translation="MKVSAVLLCLLLSAATFSLQGLAQPNGLSTSTCCYKFTNKMIPK QRLESYRRITSSYCPQEAVIFKTKLARNVCADPQQKWVQDSIAYLDKKAQNPKP" assembly_gap 1030035..1030065 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1038969..1039112 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1040876..1040916 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1043499..>1081824 /locus_tag="TREES_T100005510" mRNA join(<1043499..1043574,1045338..1045449,1045837..1045884, 1081719..>1081824) /locus_tag="TREES_T100005510" /product="Eotaxin" CDS join(1043499..1043574,1045338..1045449,1045837..1045884, 1081719..1081824) /locus_tag="TREES_T100005510" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="Eotaxin" /protein_id="ELW61710.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:P51671" /translation="MKISAAILCLLLTAISFSSQVFAEPAFIPTSCCFNVASRKISIQ KLESYRQVSGSKCPRKAVIFKTKLGKEICADPQESFKTKLAKEVCADPKEKWVKDSMK NLDQKTQTLKP" assembly_gap 1049648..1049678 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1080359..1080562 /estimated_length=204 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1082740..1083222 /estimated_length=483 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1095872..1095902 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1104415..>1107036) /locus_tag="TREES_T100005504" mRNA complement(join(<1104415..1104517,1105784..1105895, 1106961..>1107036)) /locus_tag="TREES_T100005504" /product="C-C motif chemokine 1" CDS complement(join(1104415..1104517,1105784..1105895, 1106961..1107036)) /locus_tag="TREES_T100005504" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 1" /protein_id="ELW61711.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:P22362" /translation="MKLHTMALMCLLLVGTWPQDVDSKSMHVPSSNCCFSFVKRKISP EKIQCYRNSSSTCSYRSVKLKMKKGREICALENATQAWGYLDVLKPCPPKAM" assembly_gap 1118832..1118888 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1130101..1130783 /estimated_length=683 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1141862..1141892 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1143867..1143918 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1156948..1156978 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1161174..1161204 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1167837..1167849 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1192118..1192142 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1230103..1230133 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1234214..1234679 /estimated_length=466 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1243335..1243365 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1246573..1246790 /estimated_length=218 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1264297..1264327 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1268230..1268797 /estimated_length=568 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1296569..1296815 /estimated_length=247 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1302221..1302248 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1302598..1302623 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1308113..1308123 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1315085..1315097 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1329719..1329749 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1333069..1333792 /estimated_length=724 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1334765..1335476 /estimated_length=712 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1340261..1340439 /estimated_length=179 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1340898..1341234 /estimated_length=337 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1347245..1347732 /estimated_length=488 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1348901..>1408674 /locus_tag="TREES_T100005511" mRNA join(<1348901..1348967,1353615..1353718,1361979..1362102, 1395610..1396537,1398269..1398415,1398685..1398877, 1399719..1399862,1403106..1403311,1405333..1405621, 1406564..1406755,1407604..>1408674) /locus_tag="TREES_T100005511" /product="Transmembrane protein 132E" CDS join(1348901..1348967,1353615..1353718,1361979..1362102, 1395610..1396537,1398269..1398415,1398685..1398877, 1399719..1399862,1403106..1403311,1405333..1405621, 1406564..1406755,1407604..1408674) /locus_tag="TREES_T100005511" /codon_start=1 /product="Transmembrane protein 132E" /protein_id="ELW61712.1" /db_xref="UniProtKB/Swiss-Prot:Q6IEE7" /translation="MAPGMSGRGGAALLCLSALLAHGCPQTERGNRTTKSTPHVDEHM DMQGKGLAEVTLQESSHRKHAGSGTWPLPWCPKLGPVDEATTSPNLRPLHSSPLAPSR SHPASPSPPGPQASPVLPVSYRLSHTRLAFFLREARPPSPAVANGTLQRSEPFVVFQT KELPVLNVSLGPFSTSQVVARELLQPSSTLDIPERLTVNWKVRAFIVRARVPASQPVA QVLFYVAGRDWDDFGVTERLPCVRLHAFRDAREVKSSCRLSGGLATCLVRAELPLAWF GPPAPAAPPTVRRKSPAGVAEAAGESQQAELYYTLHAPDASGGCGGTRRGAGPGAGAR AESPTQHPLLRIGSISLFRPPPRRTLQEHRLDSNLVIRLPDRPLKPGEVLSILLYLAP NSSSPSSPSVERFTLRVKAKKGVTLLGTKSRSGQWHVTSELLTGAKHSTATVDVTWAQ GTPLPPWEGQGPLEILQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTV IQRDVQAILPLAMDTEIINTAILTGRTVAIPVKVIAIEVTGLVLDVSALVECESDNED IIKVSSSCDYVFVSGKESRGSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLS QVKGWRVPILPDRRSARESEDEEEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSAE GTDQVVTMLGPDWLVEVTDLVSDFMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLT EAVLGETLLTVTEEKVSITQLQAQVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQ EALLSLWLSYSDGTTAPLSLYSPRDYGLLVSSLDERVATVTQDRAFPLVVAEAEGVGE LLRAELTIAESCQKTKRKSVLATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGEDEA RGAGPPGTAVPAPEAPGRGTASPAEPPTEDFLPLPTGFLQMPRGLTDLEIGMYALLGV FCLAILVFLINCIVFVLRYRHKRIPPEGQTSMDHSHHWVFLGRGQPLRVQGELVQGEL SPPAGNPLETVPACCHGDHHSSGSSQTSVQSQVHGRGDGSSGGSARDQAEDPASSPTS KRKRVKFTTFTTLPSEELAYDSVPAGEEDEEEEEDLGWGCPDVAGSTRPAPPPDLHNY MRRIKEIA" assembly_gap 1349101..1349137 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1349416..1349552 /estimated_length=137 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1354724..1355244 /estimated_length=521 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1410372..1412690 /estimated_length=2319 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1413203..1413220 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1421314..1421390 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1466675..1466705 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1478884..1478914 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1496120..1496139 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1498290..1498671 /estimated_length=382 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1508184..1508253 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1531078..1531821 /estimated_length=744 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1534387..1534417 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1540244..1540397 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1554410..1554765 /estimated_length=356 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1572114..1572634 /estimated_length=521 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1577525..1577545 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1582076..1582520 /estimated_length=445 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1593606..1593975 /estimated_length=370 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1598846..1598908 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1602800..1602955 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1605103..1605194 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1628221..1630382 /estimated_length=2162 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1639053..1639237 /estimated_length=185 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1644344..1644398 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1667777..1667916 /estimated_length=140 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1668942..1668957 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1679858..1679875 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1689433..1689863 /estimated_length=431 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1696111..1698100 /estimated_length=1990 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1698735..1698761 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1706804..1706834 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1712255..1712272 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1724862..1724877 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1727257..>1787868) /locus_tag="TREES_T100005503" mRNA complement(join(<1727257..1727577,1731891..1732024, 1751778..1751858,1752131..1752278,1758367..1758526, 1770808..1770911,1774404..1774577,1783975..1784109, 1785784..1785847,1787732..>1787868)) /locus_tag="TREES_T100005503" /product="T-complex protein 1 subunit zeta-2" CDS complement(join(1727257..1727577,1731891..1732024, 1751778..1751858,1752131..1752278,1758367..1758526, 1770808..1770911,1774404..1774577,1783975..1784109, 1785784..1785847,1787732..1787868)) /locus_tag="TREES_T100005503" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0044267 - cellular protein metabolic process [Evidence IEA]" /codon_start=1 /product="T-complex protein 1 subunit zeta-2" /protein_id="ELW61713.1" /db_xref="InterPro:IPR001593" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR017998" /db_xref="UniProtKB/Swiss-Prot:Q3T084" /translation="MAAIKAVNSKAEVQRAQAALAVNICAARGLQDVLRTNLGPKGTM KMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGEL LKQADIYISEGLHPRIIAEGFEAAKIKALEVLEEVKVEKEMKREILLDVARTSLRTKV HAELADVLTEAVVDSVLAVRRPDYPIDLFMVEVMEMKHKSETDTKEVNSGFFYKTAEE KEKLVKAERKFIEDRVQKIIDLKEKVCAQSNKGFVVINQKGEEKFTFIEDCINPRSVT LLVKGPNKHTLTQIKDAIRDGLRAIKNAIEDGPNKHTLTQIKDAIRDGLRAIKNAIED GCVVPGAGAVEVAIAEALVMYKHSVKGRARLGVQAFADAVLIIPKHHQQVRQIRKKMM EIMTQEAHSNDLKEVVNKLFPDSIRKDIEMSYQSIYPLHNVFIRKVKMLKKPRFELGK LMELYGEGVALEKLLGMRWAPKLNELMESKNLFKV" assembly_gap 1730380..1730449 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1733645..1746055 /estimated_length=12411 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1760661..1760691 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1765068..1765253 /estimated_length=186 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1771320..1771335 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1788029..>1789138 /locus_tag="TREES_T100005512" mRNA <1788029..>1789138 /locus_tag="TREES_T100005512" /product="Zinc finger protein 830" CDS 1788029..1789138 /locus_tag="TREES_T100005512" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 830" /protein_id="ELW61714.1" /db_xref="InterPro:IPR003604" /db_xref="UniProtKB/Swiss-Prot:Q96NB3" /translation="MASSASSRTPAGKRVVNQDELRRLMKEKQRQSTNRKRIESPFAK YNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAQLKGTKGATQGPSESAVCQSAK RKAPDAGGQDAKRGKASPVPQPSTSALPTHFDRTGRESSRATPGKPLGLGLLPDYEDE EEDEEEEQGGGGEGKRDASKQLPDAQGKEHTLPSREATSSVLPDDFFATNPPKAPLVP HSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVDARVRKVDAPKDQMDKEWDEFQK AMRQVNTISEAIVAEEDEEGRLDRQIGEIDEQIECYRRVENLRNRQDEIKNKLKEVLT IKELQKKEEENVDSDDEGELQDLLSQDWRVKGALL" assembly_gap 1797862..1797942 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1808810..1808819 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1810555..1811550 /estimated_length=996 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1811839..1812281 /estimated_length=443 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1815347..>1836723 /locus_tag="TREES_T100005513" mRNA join(<1815347..1815632,1817537..1817680,1823895..1824092, 1824750..1824901,1825841..1826007,1826121..1826198, 1826588..1826756,1827153..1827308,1829121..1829252, 1829646..1829725,1831769..1831856,1832230..1832307, 1832554..1832677,1833220..1833362,1833668..1833742, 1834131..1834277,1834750..1834957,1835336..1835457, 1836490..>1836723) /locus_tag="TREES_T100005513" /product="DNA ligase 3" CDS join(1815347..1815632,1817537..1817680,1823895..1824092, 1824750..1824901,1825841..1826007,1826121..1826198, 1826588..1826756,1827153..1827308,1829121..1829252, 1829646..1829725,1831769..1831856,1832230..1832307, 1832554..1832677,1833220..1833362,1833668..1833742, 1834131..1834277,1834750..1834957,1835336..1835457, 1836490..1836723) /locus_tag="TREES_T100005513" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006260 - DNA replication [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA]; GO_process: GO:0006310 - DNA recombination [Evidence IEA]" /codon_start=1 /product="DNA ligase 3" /protein_id="ELW61715.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR001510" /db_xref="InterPro:IPR012308" /db_xref="InterPro:IPR012309" /db_xref="InterPro:IPR012310" /db_xref="InterPro:IPR016027" /db_xref="UniProtKB/Swiss-Prot:P49916" /translation="MAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESG GDMKEWYHIKCMFEKLERARATTKRIEDLTELEGWEELEDNEKEQINQHIADLSSKAT GTPKKKAVVQAKLTTAGKVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEAPSSPSPKA SLSSSKCDPKHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLQKGTAGDGFHGDVYL TVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKS FPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALHDIASRCTANDLKCIIRLIKHDLK MNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKQPGRRRTLSVQASLMT PVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK VAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVF DCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRVIREG LEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIF LMGCYDPSSQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPGWLKINKIYYP DFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKE LYQLSKEKADFTVMAGEEGSSSTGGSSGENEGTSGSAVSHKARRAAPNKPSANAKKAE GKLSNPNSKGSNMLTAKSSPVKVGQKMAVKSSLVKVGEKRKAADETPCQAKVLLDIFT GVRLYLPPSIPDFSRLRRYFVAFDGDLVQEFDMASATHVLGSREKNPEAQQVSPEWIW ACIRKRRLVAPC" assembly_gap 1819697..1819727 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1842021..>1859765) /locus_tag="TREES_T100005502" mRNA complement(join(<1842021..1842202,1845250..1845273, 1847288..1847498,1848451..1848534,1851743..1852156, 1858009..1858196,1859666..>1859765)) /locus_tag="TREES_T100005502" /product="E3 ubiquitin-protein ligase rififylin" CDS complement(join(1842021..1842202,1845250..1845273, 1847288..1847498,1848451..1848534,1851743..1852156, 1858009..1858196,1859666..1859765)) /locus_tag="TREES_T100005502" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase rififylin" /protein_id="ELW61716.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR011011" /db_xref="UniProtKB/Swiss-Prot:Q8WZ73" /translation="MDNITGALEMVLEPLKGPREGSSPKVISCMTQEDFIMWATCCNW FCLDGQPEEVPPPQGARSQAYSNPGYSSFPSPTGSEPSCKACGAHFANTARKQQTCLD CKKNFCMTCSSQVGNGPRLCLLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTEMC REKEELVFLVLGQQPVIPQEGRTRAPTLSPDFPEQQAFLTQPHASTVPPTSPNLPSSP AQATSVSPAQAQENQQANGYVSQDQEDPTYLESTARAPVEDETQSIDSEDSFVPGRRA SLSDLTDLGDIEGLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHLVG AAENQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVI RAVHVFRS" assembly_gap 1883061..1883123 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1895931..1896033 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1924720..1925021 /estimated_length=302 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1934978..>1957596) /locus_tag="TREES_T100005501" mRNA complement(join(<1934978..1935061,1935195..1935359, 1940978..1941048,1941150..1941240,1943530..1943625, 1944115..1944249,1944484..1944565,1956812..1956930, 1957105..1957166,1957515..>1957596)) /locus_tag="TREES_T100005501" /product="DNA repair protein RAD51 like protein 4" CDS complement(join(1934978..1935061,1935195..1935359, 1940978..1941048,1941150..1941240,1943530..1943625, 1944115..1944249,1944484..1944565,1956812..1956930, 1957105..1957166,1957515..1957596)) /locus_tag="TREES_T100005501" /note="GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO_process: GO:0006259 - DNA metabolic process [Evidence IEA]" /codon_start=1 /product="DNA repair protein RAD51 like protein 4" /protein_id="ELW61717.1" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013632" /db_xref="InterPro:IPR020588" /db_xref="UniProtKB/Swiss-Prot:O75771" /translation="MGVLRVGLCPGLTQEMVQLLRSRGIKTVVDLVSADLEEVAQKCG LSYKALVALRRVLLAQFSAFPFNGADLYEELKTSTAILATGIGSLDKLLDAGLYTGEV TEIVGGPRSGKTQVCLCVAANVAHSLQQNVLYIDSSGGLMASRLLQLLQARTQDEEEQ AGALQRIQVVHAFDIFQMLDVLQDLRGTVAQQVTSSLGTVKVIVVDSVTAVVSPILGG QQREGLALMMQLARELKTLARDLSVAVLVTNHTIRDRDSGRLKPALGRSWSFVPSTRI LLDLVEGSEASGSQRSMCLTKSSRQPTGFQEMVDIGTWGTPEKSPALQGDQT" assembly_gap 1937999..1939433 /estimated_length=1435 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1943170..1943200 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1952693..1953295 /estimated_length=603 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1957751..1957768 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1959852..>1967646 /locus_tag="TREES_T100005514" mRNA join(<1959852..1960063,1965713..1966085,1966678..1966914, 1967494..>1967646) /locus_tag="TREES_T100005514" /product="Fibronectin type III domain-containing protein 8" CDS join(1959852..1960063,1965713..1966085,1966678..1966914, 1967494..1967646) /locus_tag="TREES_T100005514" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Fibronectin type III domain-containing protein 8" /protein_id="ELW61718.1" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="UniProtKB/Swiss-Prot:Q2YDH8" /translation="MASEALCKVGDGEEIIMLKKESLSARDAFDQLPKPFPNPKSMNR TVTTKGLPLSSRGSLVNCMERDDINLSKPMPMEDSECSSDDTSITPMSRTLLNPIKLA VTQPNSSFFAGMLEGELNKLSLSSLAKNTEKGGDLALCPNPSKSQLAPGGLLDLDNPA LDTDTSSTYSECSVVMDLPEAPFIYEHTVSDSTAVISWTYALGKQQVSFYQVLLQEVA KQNNNLSSKTVNHPWIFNKILGTTVKLMELKPNSSYCLTVRAVNAAGAGKWCKPYKFA TVATDFNSFPENNPIQITVQRKEPQRKTVSIGLEEMRRVEDLEYLFPY" assembly_gap 1965401..1965543 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1971164..>1982329) /locus_tag="TREES_T100005500" mRNA complement(join(<1971164..1971238,1971328..1971487, 1973045..1973247,1974545..1974591,1974735..1974870, 1975723..1975915,1976261..1976358,1976505..1976581, 1977393..1977472,1978060..1978277,1981287..1981449, 1982009..1982187,1982312..>1982329)) /locus_tag="TREES_T100005500" /product="Notchless protein like protein 1" CDS complement(join(1971164..1971238,1971328..1971487, 1973045..1973247,1974545..1974591,1974735..1974870, 1975723..1975915,1976261..1976358,1976505..1976581, 1977393..1977472,1978060..1978277,1981287..1981449, 1982009..1982187,1982312..1982329)) /locus_tag="TREES_T100005500" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Notchless protein like protein 1" /protein_id="ELW61719.1" /db_xref="InterPro:IPR001632" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="InterPro:IPR020472" /db_xref="UniProtKB/Swiss-Prot:Q9NVX2" /translation="MAAAVADEAAAARDVQRLLVQFQDEGGQLLGSPFDVPVDITPDR LPFPWTAPRTGCSSCATRCWPSMKNRWEGAEMHTELVQAGNGGDSNQSLAVERGRTDS SLVLEAELTEPENAWKTREDPLPLAFYVHDAEIVSSLEKTLESQAVETEKVVDIIYQP QAIFKVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC KGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPL HANPECRYVASSSKDGSVRVWDTTSGRCERILTGHTQSVTCLRWGGDGLLYSASQDRT IKVWRAQDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDVQGSLQELK ERALSRYNLVRGQGPERLVSGSDYFTLFLWSPAEDKKPLARMTGHQALVNQVLFSPDS RLVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD VKTQKLAIDLPGHADEVYAVDWSPDGQRVASGGKDKCLRM" gene <1983669..>1984418 /locus_tag="TREES_T100005515" mRNA join(<1983669..1983705,1984249..>1984418) /locus_tag="TREES_T100005515" /product="hypothetical protein" CDS join(1983669..1983705,1984249..1984418) /locus_tag="TREES_T100005515" /codon_start=1 /product="hypothetical protein" /protein_id="ELW61720.1" /translation="MSKPNTPMWLKHEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE EEEEEEEEEEEEEKNLKDVNLKDV" assembly_gap 1986180..1986189 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1987881..>2020978 /locus_tag="TREES_T100005516" mRNA join(<1987881..1988060,1988547..1988583,1989892..1990067, 1991584..1991673,1994797..1994964,1995488..1995656, 1996911..1997081,2000880..2001051,2005801..2006101, 2007112..2007206,2007366..2007513,2008432..2008572, 2011307..2011434,2012313..2012379,2013194..2013307, 2013569..2013684,2015348..2015465,2017583..2017738, 2020718..>2020978) /locus_tag="TREES_T100005516" /product="Protein unc-45 like protein B" CDS join(1987881..1988060,1988547..1988583,1989892..1990067, 1991584..1991673,1994797..1994964,1995488..1995656, 1996911..1997081,2000880..2001051,2005801..2006101, 2007112..2007206,2007366..2007513,2008432..2008572, 2011307..2011434,2012313..2012379,2013194..2013307, 2013569..2013684,2015348..2015465,2017583..2017738, 2020718..2020978) /locus_tag="TREES_T100005516" /note="GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Protein unc-45 like protein B" /protein_id="ELW61721.1" /db_xref="InterPro:IPR000225" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:Q8CGY6" /translation="MAEAEAAQLKEEGNRHFQLQDYKAATKSYSQALKLTKDKALMAT LYRNRAACGLKMVWGRESYSQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFK DVQRCATLEPRNQNFQEMLRRLNTSIQEKLRVQFSTDSRVQTMFEILLDENSEADKRE KAANNLIVLGREEAGAERIFQSNGVALLLQLMDTKRLELVLAAVRTLSGMCSGHRARA TAILHAVRIDQICSLMSVENEEMSLAVCNLLQAIIDSLSGEDKREHRGKEEALVLDTK KDLKQITSHLLDMLVSKKVSGQGRDQALNLLNKNVPRKDLAIHDNSRTIYVVDNGLRK ILKVVGQVPDLPNCLPLTDNTRMLASILINKLYDDLRCDPEREHFRKICEEYITGKFD PQDMDKNVIAIQTVSGILQGPFDLGNQLLGLKGVMEMMVALCGSEREADQLVAVEALI HASTKLSRATFIITNGVSLLKEIYKTTKNEKIKIRTLVGLCKLGSAGGTDYGLRQFAE GSTEKLAKQCRKWLCNASIDTRTRRWAVEGLAYLTLDADVKDDFVQDIPALQAMFELA KASTSDKTILYSVATTLVNCTNSYDVKEVIPELVQLAKFSKQHVPEEHPKDKKDFIDM RVKRLLKAGVISALACMVKADNAILTDQTKELLARVFLALCDNPKDRGTIVAQGGGKA LIPLALEGTDVGKVKAAHALAKIAAVSNPDIAFRGERVYEVVRPLVSLLDTQRDGLQN YEALLGLTNLSGRSDKLRQKIFKEKALPDIENYMFENHDQLRQAATECMCNMVVNKEV QERFLADGNDRLKLVVLLCGEDDDKVQNAAAGALAMLTAAHKKLCLKMTQVTSQWLEI LQRLCLHDRLSVQHRGLVIAYNLLAADAELAKKLVESELLEILTVVGKQEPDEKRAAV VQTARECLIKCMDYGFIKPVS" assembly_gap 2016373..2016403 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2026909..2027153 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2037644..>2038198) /locus_tag="TREES_T100005499" mRNA complement(join(<2037644..2037903,2038087..>2038198)) /locus_tag="TREES_T100005499" /product="60S ribosomal protein L17" CDS complement(join(2037644..2037903,2038087..2038198)) /locus_tag="TREES_T100005499" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="60S ribosomal protein L17" /protein_id="ELW61722.1" /db_xref="InterPro:IPR001063" /db_xref="UniProtKB/Swiss-Prot:P24049" /translation="MVRYSLDLEKPTKSCKSRSSNLHVHFKNSSEIAQVIKESNAELK GLDVDSLVLEYIQVNKALKMHRHTYRAHKQINPYMSSPCHIEMILTEKEQIVPKLEEE VAQKKKISQKKLKKQKLMIWE" assembly_gap 2050244..2052238 /estimated_length=1995 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2060753..>2061379 /locus_tag="TREES_T100005517" mRNA <2060753..>2061379 /locus_tag="TREES_T100005517" /product="Glutamate dehydrogenase 1, mitochondrial" CDS 2060753..2061379 /locus_tag="TREES_T100005517" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0006520 - cellular amino acid metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Glutamate dehydrogenase 1, mitochondrial" /protein_id="ELW61723.1" /db_xref="InterPro:IPR006095" /db_xref="InterPro:IPR006096" /db_xref="UniProtKB/Swiss-Prot:P00367" /translation="MVWIAHTCASTTGHCDTNALACMSGKPISQGGIHGCISTTDQGF SMGWRTSSMKPFVSVLGMTPGFEDKMFIVQGFGNVGLHSMRYLHRFGAKCVAVGESDW SIWYPNGIDRKELGHFKLQHSSILGFLKASPYKGSIMEAGCDILIADASEKHLPISNT PRVKDDIITEVANGPATPDVDKIFLERNITVIPHLYLNVRRVTGSYIE" assembly_gap 2062387..2067568 /estimated_length=5182 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2069478..>2070587 /locus_tag="TREES_T100005518" mRNA join(<2069478..2069672,2069904..>2070587) /locus_tag="TREES_T100005518" /product="NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial" CDS join(2069478..2069672,2069904..2070587) /locus_tag="TREES_T100005518" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO_process: GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [Evidence IEA]" /codon_start=1 /product="NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial" /protein_id="ELW61724.1" /db_xref="InterPro:IPR002624" /db_xref="UniProtKB/Swiss-Prot:O95299" /translation="MALRLLKLARASAPTRILSAGTRCVGGIHTNAQHELQYGPLAYI LGEKTIKKLTEYSKVITVEGNLSTGQGVVLEHSVFLEAAYRQGFIWKQCVEHYHEVKK VTICEYLSPHIVVYIHTPVPEIQSRIQKKGNPHEMKITPAYLQDIENAKKTFLPEMNE KCEVLQYSAKEAEDTEKVVEDMEYLKCNKGPWLKQDDRTFHHLRMLVQNKVEVLNYTS TPMYLPEITTEAHQSDHTFCAFRELWAAGTTLATTPTWTTSGSGLNEQPPCLRQLRPV TEELPACLMAPGSVQL" assembly_gap 2081886..2082192 /estimated_length=307 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2082981..2083222 /estimated_length=242 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2084848..2085175 /estimated_length=328 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2088524..2088533 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2102058..2102078 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2104017..2104047 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2109743..2111084 /estimated_length=1342 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2115722..>2138475 /locus_tag="TREES_T100005519" mRNA join(<2115722..2115815,2137622..>2138475) /locus_tag="TREES_T100005519" /product="Keratin, type II cytoskeletal 8" CDS join(2115722..2115815,2137622..2138475) /locus_tag="TREES_T100005519" /note="GO_component: GO:0045095 - keratin filament [Evidence IEA]" /codon_start=1 /product="Keratin, type II cytoskeletal 8" /protein_id="ELW61725.1" /db_xref="InterPro:IPR003054" /db_xref="InterPro:IPR016044" /db_xref="UniProtKB/Swiss-Prot:P05787" /translation="MKLVGFLLLMTLSLSLEVQELQAAVIPVNVLGAVPGTAEQNPGD QVAPPAAEDVLEQHGQHIQELHQQLAPQQDTLGQDQLEVELGYRQGLVEDLNNKYRMG SASTEMENEFFLIKKIVDDAYKNNMDLETHLEGLTDEINFLRQVFELKMDKLQSQIPD NSVDNSRTLCMDSIVAQVPTENRKITNHSQAEAEDMFQIKYEELLMLVGKHGDEICTT KTKISKKNWNSSQLQAKIEGFNGQRASLEAAIAHTESHGKLAIKDANTKLAELGTARQ RAMQNTARRLHDFQDLLNVKLSLDIEIATYRELLEDEEI" assembly_gap 2119837..2119852 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2135538..2135669 /estimated_length=132 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2151463..2151479 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2162545..2163702 /estimated_length=1158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2166844..2167858 /estimated_length=1015 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2168801..2169776 /estimated_length=976 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2180527..2182182 /estimated_length=1656 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2194765..>2195940) /locus_tag="TREES_T100005498" mRNA complement(join(<2194765..2194985,2195856..>2195940)) /locus_tag="TREES_T100005498" /product="Extracellular peptidase inhibitor" CDS complement(join(2194765..2194985,2195856..2195940)) /locus_tag="TREES_T100005498" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0030414 - peptidase inhibitor activity [Evidence IEA]" /codon_start=1 /product="Extracellular peptidase inhibitor" /protein_id="ELW61726.1" /db_xref="InterPro:IPR008197" /db_xref="InterPro:IPR015874" /db_xref="UniProtKB/Swiss-Prot:P14730" /translation="MKKVTVLILVAFVTVGMEVAYAKRPPFRGPERPGVCPEVPEGSF GPCVELCLEDESCPERMKCCSNGCGHVCKRALSKVSINQTRADQGVDKSSVDISGVD" gene complement(<2197499..>2198656) /locus_tag="TREES_T100005497" mRNA complement(join(<2197499..2197894,2198396..>2198656)) /locus_tag="TREES_T100005497" /product="Keratin, type II cytoskeletal 8" CDS complement(join(2197499..2197894,2198396..2198656)) /locus_tag="TREES_T100005497" /note="GO_component: GO:0045095 - keratin filament [Evidence IEA]" /codon_start=1 /product="Keratin, type II cytoskeletal 8" /protein_id="ELW61727.1" /db_xref="InterPro:IPR003054" /db_xref="InterPro:IPR016044" /db_xref="UniProtKB/Swiss-Prot:P11679" /translation="MSIRVTQKSCKVSASGTRSPFSSCLQMSAPDTHISSSGFYQVDS SSDFWGDLVFGLSLHLGYGFAVGVGGITAIMVNQSLLNFFKLELNEEEIHKLQSQISD TSVVLSMNSSRSMNMDGIINEVRAQYEETAHCSQAEAEGTYQIKYKKLQSLARKHRHD LHHTKTEISEKNQNIDHLQAEIKRSKIRELLWRPDVEQHAELAIKDANTRLAEQEGAL " gene complement(<2209009..>2210411) /locus_tag="TREES_T100005496" mRNA complement(join(<2209009..2209096,2209674..2209788, 2210336..>2210411)) /locus_tag="TREES_T100005496" /product="C-C motif chemokine 4" CDS complement(join(2209009..2209096,2209674..2209788, 2210336..2210411)) /locus_tag="TREES_T100005496" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 4" /protein_id="ELW61728.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:Q17QA1" /translation="MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTLRKLP RSFVTDYYETSSLCSQPAVVFQTRKGRQVCANPSESWVQEYMDDLELN" gene <2222270..>2223573 /locus_tag="TREES_T100005520" mRNA join(<2222270..2222345,2223025..2223139,2223483..>2223573) /locus_tag="TREES_T100005520" /product="C-C motif chemokine 3" CDS join(2222270..2222345,2223025..2223139,2223483..2223573) /locus_tag="TREES_T100005520" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 3" /protein_id="ELW61729.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:P50229" /translation="MKVLTAALAVLLGTMALCSQVFSAPFGADTPTACCFSYTSRQIP YKFIDDYYETNSQCSQPGVIFLTKKSRQICSNPAEAWVQEYITQLELNA" assembly_gap 2223809..2223839 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2259519..2260663 /estimated_length=1145 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2295603..2295962 /estimated_length=360 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2297127..2297154 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2302229..2302286 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2307827..>2312733 /locus_tag="TREES_T100005521" mRNA join(<2307827..2307902,2311820..2311985,2312610..>2312733) /locus_tag="TREES_T100005521" /product="C-C motif chemokine 15" CDS join(2307827..2307902,2311820..2311985,2312610..2312733) /locus_tag="TREES_T100005521" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 15" /protein_id="ELW61730.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:Q16663" /translation="MKVSMAAFSFLILTTVLGSQARVIDGTLEKERLRPLTAFTLVTG FHQPADCCFSYTQRSIRCSFMKAYFETSSGCSRPAVIFLNKIGKRVCADPSNVKVQDC MKTLGKQPISKNPGTMQLA" assembly_gap 2311498..2311641 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2327936..>2330393 /locus_tag="TREES_T100005522" mRNA join(<2327936..2328023,2329798..2329912,2330306..>2330393) /locus_tag="TREES_T100005522" /product="C-C motif chemokine 14" CDS join(2327936..2328023,2329798..2329912,2330306..2330393) /locus_tag="TREES_T100005522" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 14" /protein_id="ELW61731.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:Q16627" /translation="MKVSVTAISLLLLLLLAVMAPEAKANSSSQGPYHPAECCFTYVT RPVQRHRIAHYYETSSECSKPGIVFITKKGYSICANPKDDWVQDYIKDLEEN" gene <2333476..>2337085 /locus_tag="TREES_T100005523" mRNA join(<2333476..2333551,2336375..2336495,2336938..>2337085) /locus_tag="TREES_T100005523" /product="C-C motif chemokine 16" CDS join(2333476..2333551,2336375..2336495,2336938..2337085) /locus_tag="TREES_T100005523" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 16" /protein_id="ELW61732.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:O15467" /translation="MKVSVATLFLLIIILATTPALYGQSRIPESVNLSSYCCVKYQEK VLPRKLVVGYRKALSCHWPAIIFVTKKNREVCTNPNNNWVQEYIKDPNLPLLPPKKLA QAKSIRSRKGQP" gene <2355037..>2392400 /locus_tag="TREES_T100005524" mRNA join(<2355037..2355289,2374210..2374355,2380921..2381077, 2384173..2384284,2392313..>2392400) /locus_tag="TREES_T100005524" /product="C-C motif chemokine 5" CDS join(2355037..2355289,2374210..2374355,2380921..2381077, 2384173..2384284,2392313..2392400) /locus_tag="TREES_T100005524" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 5" /protein_id="ELW61733.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:Q8HYQ1" /translation="MRAAPRPAAQPPAVAPSSAVGSPAAAPRQPGLMAQMPTTAADVA VGSGVDTPWGLPSLGAAVEEETLSPPGLTSLTRSLRAPSQHTQPPRYLVVGSSSNQRP VSTAPVNKQTTCGLQLQKTSGCAQPLSCVGKGQPKLQRSLQRSLRPTQSCTKPLPTDT MKTSAVVLVVILTAAALCSPASASPYASDTTPCCFAYISRPLPRTHLREYFYTSGKCS NPAVVFITRKNRQVCANPEKKWVREYINSLEMS" assembly_gap 2358267..2358295 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2361862..2362664 /estimated_length=803 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2366325..2366401 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2368822..2368901 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2383752..2384054 /estimated_length=303 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2387627..2387716 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2397653..>2415347 /locus_tag="TREES_T100005525" mRNA join(<2397653..2397703,2401115..2401296,2401564..2401690, 2402307..2402363,2403213..2403270,2403661..2403791, 2410913..2411095,2411465..2411554,2411989..2412108, 2413247..2413320,2414209..2414260,2414685..2414771, 2415009..>2415347) /locus_tag="TREES_T100005525" /product="hypothetical protein" CDS join(<2397653..2397703,2401115..2401296,2401564..2401690, 2402307..2402363,2403213..2403270,2403661..2403791, 2410913..2411095,2411465..2411554,2411989..2412108, 2413247..2413320,2414209..2414260,2414685..2414771, 2415009..2415347) /locus_tag="TREES_T100005525" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="ELW61734.1" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:A2RTY3" /translation="ELRKATAPVHLPLSCYLMPKEEFPPSPEYWRLHPSKPNAVPYCY FNKSEIYSHWHTLYGHQEERDAQKMSQKKRDHPRYLKEGTHGQMIYLPMSKLTIRSQV GSRTLEPTSEALKQQRLKALGCLGVGDKFVMEALRRVAQTGSEKVKYEAYRSLAILGC LNKHVIQALISQLKGQNEGRKMETLTGLRVALNSWAAVSEDKRTPVEDEEKLVSVLQI LIKKSSNKIALEAALSLGFLRPCSNMAQEFLLQFLYQQPKTEQMKALRMLVKIMHVYT DTVIRAILDQLYSDVLEDRLEANQMLRTIGLEQIKAHGLEELTFDRLRKKTYNEPFFA MRQAVAKTVEVLKMKPTMINLVEAQLMNPNDTARQEAVTSLSVLGIRNPQVFHLLLDM LDAEENQAVKTSLQETLILRASIDPWIQNKVKNKIFFVCEAPKTNVKIEPTRFRKQPE IPEELNIQDFRLAKLNPLFVAKSSTKVEQKKKLPAFPPCFLKPQKHKPQATGPWEPSI RTLAENSK" assembly_gap 2411627..2411968 /estimated_length=342 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2441202..2441272 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2448061..2449281 /estimated_length=1221 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2475170..2475223 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2475655..2475684 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2489464..>2520248 /locus_tag="TREES_T100005526" mRNA join(<2489464..2489574,2507787..2507866,2508047..2508234, 2513328..2513552,2516125..2516373,2517276..2517425, 2517685..2517852,2519854..>2520248) /locus_tag="TREES_T100005526" /product="Matrix metalloproteinase-28" CDS join(2489464..2489574,2507787..2507866,2508047..2508234, 2513328..2513552,2516125..2516373,2517276..2517425, 2517685..2517852,2519854..2520248) /locus_tag="TREES_T100005526" /note="GO_component: GO:0031012 - extracellular matrix [Evidence IEA]; GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_function: GO:0008237 - metallopeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Matrix metalloproteinase-28" /protein_id="ELW61735.1" /db_xref="InterPro:IPR000585" /db_xref="InterPro:IPR001818" /db_xref="InterPro:IPR002477" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR018487" /db_xref="InterPro:IPR021190" /db_xref="UniProtKB/Swiss-Prot:Q9H239" /translation="MVARVSFLLRALPLLLWERLDAEPAERVGRELREEAEAFLEKYG YLSDQVPKAPTSAQFNNAIREFQWVSQLPISGVLDRTTLHQMARPRCGVADTDSHAAW TERISALFAGRQAKLRRKKRFSKQGNKWYKQHLSYRLVNWPERLPEPAVRGAVRAAFQ LWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHF DLDERWSLSRRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDSLLSWDD VLAVQSLYGKPLRGSVAFQQPGKLFTDFEAWEPRNSQGRRTETQGPKYCHSSFDAITI DRQQQVYVFKGSHYWEVEPDGNVSEPRPLQERWAGLPPNIEAAAVSWEDGDFYFFKGS RCWRFRGSQPVWGFPQLCRARGLPRHPDAALFFPPLRRLIIFKGARYYMLGRGGLQVE PYYPRGLQDWGGLPEEVSGALPRPDGSIIFFRDDRYWRLDQAKLRTTASGRWTTELPW MGCWHANSGGTLF" assembly_gap 2494541..2494830 /estimated_length=290 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2511966..2511996 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2533792..>2542626 /locus_tag="TREES_T100005527" mRNA join(<2533792..2534173,2536279..2536520,2538099..2538206, 2539259..2539413,2541090..>2542626) /locus_tag="TREES_T100005527" /product="GAS2-like protein 2" CDS join(2533792..2534173,2536279..2536520,2538099..2538206, 2539259..2539413,2541090..2542626) /locus_tag="TREES_T100005527" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007050 - cell cycle arrest [Evidence IEA]" /codon_start=1 /product="GAS2-like protein 2" /protein_id="ELW61736.1" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR003108" /db_xref="UniProtKB/Swiss-Prot:Q5SSG4" /translation="MSQPRGHRRPKSLGPPVRSIRPFKSSMQYLEAMKEDLAEWLRDL YGLDIDADNFLQVLETGLVLCRHANAVTKAALAFLAEAPAQAQRILVPRAGVFCNGAA QPGTFQARDNVSNFIQWCRHEMGIQEVLMFETEDLVLRKNVKNVVLCLLELGRRAWRF GVAAPTLVQLEEEIDEELRQELALPRPEPPPPVPPTRRPCHFRNLDQMVQSLVSHCRC PVQFSMVKVSEGKYRVGDSSTLIFIRILRSHVMVRVGGGWDTLGHYLDKHDPCRCTSL CESPESPLPVVLVGELRVSRSQERSLTSLRRQLPAGDSPPSPQPSPTYRRQEPQCTLS GKRESRSSPERPRGRTPTSWVPEQTDTPETHTRIPTPQKLQVPEATTKGTPARGPSSL PRPPSPAKPLGPRLPLQGEAEGAFCQLGEPTTVRSPSPVKGLTKIPVRLSLARTPTPG RSFPGTATTSAMTELGRGPVPIRAITGDLAGSRHVNCSAKMRQGGQVPGEAAEPWGPG LQEREGKYTPRPPGRTEEQAVSCSLEEEILANMKLLDVGGARSQDTGSGVIPRSGVYV PSLGGRWPEPGGPYDKVIQELAQGPPPLLKVDLRAWKATLVGSSKPAVASDTGSQQGK LGARGSSGPKTKPSPRAKSPRMSKAPSLGGQDCSGPPTSASPEAPTHLPSDPSCDKAK TRLGKGKRTLRKPQRVPSIYKLKLRPRMRPRRDHRPEKQPSRIPKPLAYLHLGRANVP SRSRLLRAARGCKGGGASCVNGVSAGEQEEEKEKEPTIPPEGSPQALEGLEPEQLDQT PLPAEETWV" assembly_gap 2540606..2540981 /estimated_length=376 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2545762..>2552177) /locus_tag="TREES_T100005494" mRNA complement(join(<2545762..2546026,2546924..2547048, 2551962..>2552177)) /locus_tag="TREES_T100005494" /product="Ras-like protein family member 10B" CDS complement(join(2545762..2546026,2546924..2547048, 2551962..2552177)) /locus_tag="TREES_T100005494" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="Ras-like protein family member 10B" /protein_id="ELW61737.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR013753" /db_xref="InterPro:IPR020851" /db_xref="UniProtKB/Swiss-Prot:Q5SSG5" /translation="MVSTYRVAVLGARGVGKSAIVRQFLYNEFSEVCVPTTARRLYLP AVVMNGHVHDLQILDFPPISAFPVNTLQEWADACCRGLRSVHAYILVYDICCFDSFEY VKTIRQQILETRVIGTSETPIIIVGNKRDLQRGRVIPRWNVSHLVRKTWKCGYVECSA KYNWHILLLFSEXXXXXXXXRQVHAALRFQGALRRNRCAIM" assembly_gap 2545828..2545851 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2554948..2556241 /estimated_length=1294 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2566301..>2731629) /locus_tag="TREES_T100005493" mRNA complement(join(<2566301..2566375,2570384..2570538, 2582058..2582144,2583307..2583391,2617452..2617581, 2619658..2619803,2623155..2623301,2624140..2624181, 2644654..2644846,2654283..2654542,2680393..2680491, 2681021..2681186,2684112..2684227,2686685..2686774, 2686896..2687016,2687502..2687723,2692827..2693017, 2709515..2709760,2717097..2717232,2722429..2722534, 2731593..>2731629)) /locus_tag="TREES_T100005493" /product="AP-2 complex subunit beta" CDS complement(join(2566301..2566375,2570384..2570538, 2582058..2582144,2583307..2583391,2617452..2617581, 2619658..2619803,2623155..2623301,2624140..2624181, 2644654..2644846,2654283..2654542,2680393..2680491, 2681021..2681186,2684112..2684227,2686685..2686774, 2686896..2687016,2687502..2687723,2692827..2693017, 2709515..2709760,2717097..2717232,2722429..2722534, 2731593..2731629)) /locus_tag="TREES_T100005493" /note="GO_component: GO:0030117 - membrane coat [Evidence IEA]; GO_component: GO:0030131 - clathrin adaptor complex [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="AP-2 complex subunit beta" /protein_id="ELW61738.1" /db_xref="InterPro:IPR000225" /db_xref="InterPro:IPR002553" /db_xref="InterPro:IPR008152" /db_xref="InterPro:IPR009028" /db_xref="InterPro:IPR013041" /db_xref="InterPro:IPR015151" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:P62944" /translation="MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVG KDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLI RALAVRTMGYIWVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVARLHDINAQMVEDQG FLDSLWDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWG QIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDY YNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYV KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKQSAERCVST LLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIV GEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLA TQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIG SLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTAATNLEQPQVIPSQGD LLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGLDSLLGSDLGGGIGGSPAVGQSFIP SSVPATFAPSPTPAVVSSGLNDLFELSTGIGMAPGGYVAPKAVWLPAVKAKGLEISGT FTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSL PLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDI PNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAE LRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN" assembly_gap 2571126..2571140 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2625383..2625537 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2653101..2653814 /estimated_length=714 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2661145..2661270 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2662490..2680262 /estimated_length=17773 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2689874..2691358 /estimated_length=1485 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2694125..2694134 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2700869..2700955 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2715431..2715457 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2725732..2726123 /estimated_length=392 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2748696..2748765 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2753915..>2757766 /locus_tag="TREES_T100005528" mRNA join(<2753915..2754040,2754632..2755185,2757367..>2757766) /locus_tag="TREES_T100005528" /product="Peroxisome assembly protein 12" CDS join(2753915..2754040,2754632..2755185,2757367..2757766) /locus_tag="TREES_T100005528" /note="GO_component: GO:0005778 - peroxisomal membrane [Evidence IEA]; GO_process: GO:0007031 - peroxisome organization [Evidence IEA]" /codon_start=1 /product="Peroxisome assembly protein 12" /protein_id="ELW61739.1" /db_xref="InterPro:IPR006845" /db_xref="UniProtKB/Swiss-Prot:O00623" /translation="MAEHGAHITTASVADDRPSIFEVVAQDSLMTAVRPALQHVVKVL AESNPAHYGFFWRWFDEIFTLLDLLLQQHYLSKTSASFSENFYGLKRILMGDTHKSQR LASAGLPKQQLWKSIMFLVLLPYLKVKLEKLVSSLREEDEYSIHPPSSHWKRFYRAFL AAYPFVNMAWEGWFLVQQLQYILGKAQHHSPLLKLAGVRLGRLTVQDIQALEHRLAKA SMMQQPTKSISEKIKSALKKALGGVALSLSTGLSVSVFFLQFLDWWYSSENQETIKSL TALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVR SHQACPITGYPTEVQHLIKLYSPEN" assembly_gap 2757821..2757842 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2775784..>2788631 /locus_tag="TREES_T100005529" mRNA join(<2775784..2776843,2781500..2782100,2787800..2787950, 2788059..>2788631) /locus_tag="TREES_T100005529" /product="Schlafen family member 14" CDS join(2775784..2776843,2781500..2782100,2787800..2787950, 2788059..2788631) /locus_tag="TREES_T100005529" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]" /codon_start=1 /product="Schlafen family member 14" /protein_id="ELW61740.1" /db_xref="InterPro:IPR007421" /db_xref="UniProtKB/Swiss-Prot:P0C7P3" /translation="MEGPKNDEEMPYPEIIVEVGKVTFGEENRKKMPNGCLKRAENLK IIQAVCALLNSGGGVIKAELEDKTYSYRCHGLGQDLETSFQKLLPSGSQRYLDCMQQG HTLLIFVKPWSPDLFSLPLRICSLRSNLYGRDVTSAINLSASGALELLREKEAGAHRR RPVEELLLPQQGLRSYTQEEEDIKMSASEFFKKDKLMYKEKLNFTESTHVEFKRFTTK KIVPRIKEMLPHYVSAFANTQGGYLIIGVDDKSKEVFGCKREKVNPDLLKKEIENCIE KLPTFHFCREKLKVNFTTKILNVYQKDVLYGYVCVVRVEPFCCVVFAEAPDSWIMRDN MVTRLTAEHWVVTMLDIQSGIVLLSRSWAGDIGLREERSVLCDALLIALNSPLVLYTI LLDPSWTGAAEYARNTARQLKQKLQSVGGYTGRLCVLPRLILTSTQCRPGEIPVHYPQ SYRLANEDEMAGLLQALVVLSLCSRSLLSDQLGCEFVNLLIAEQSELLSESLQETREL FIHCFPGTRKTAIAIKIMEKIKDLFHCKPKEILYVCESDSLKDFVIQQTTCQAVTRKA FIQGEFQKIKHIVMDETENFCSKYGDWYTKAKNITHPKFPRKTITNGIHCALEIATVI KEEIKRIKENPPCSMSVDTLALFQEAAYDEAMCAQALPGVCETKTNLTAEQIVNYVAE RCHTLLQCGYLPKDIAILCRREEDRARYKLALLRAMQLIETHGASEMVFSQAEGVRSR HIVLDSIQQFSGLESNIVFGISPECAQSEEFHKFCFASKAIKHLYLLYERRVAF" assembly_gap 2783876..2783906 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2795253..>2795834 /locus_tag="TREES_T100005530" mRNA <2795253..>2795834 /locus_tag="TREES_T100005530" /product="Inactive serine/threonine-protein kinase VRK3" CDS 2795253..2795834 /locus_tag="TREES_T100005530" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Inactive serine/threonine-protein kinase VRK3" /protein_id="ELW61741.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017442" /db_xref="UniProtKB/Swiss-Prot:Q8IV63" /translation="MDSCSMSRTSSSGLPNLCKLDALEYLHENEYVCGNLTAENIFVN PEDRSQVTLAGDSFAFRYCPSGRHVACVEGSRSPREGDLEFISMDLHKGQGPSRRSDL QTLGYCMLKWLCGFLPWTKCLPNTEEVMKQKQKFLDNPEPLMGLCGRWIRPSETLQEY LKVVMALKYDEKPPYTVLRNSLESLLQDLRVSP" assembly_gap 2806296..2807229 /estimated_length=934 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2812766..>2821196 /locus_tag="TREES_T100005531" mRNA join(<2812766..2813840,2814882..2814928,2818685..2818870, 2819613..2820226,2820422..>2821196) /locus_tag="TREES_T100005531" /product="Schlafen family member 13" CDS join(2812766..2813840,2814882..2814928,2818685..2818870, 2819613..2820226,2820422..2821196) /locus_tag="TREES_T100005531" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]" /codon_start=1 /product="Schlafen family member 13" /protein_id="ELW61742.1" /db_xref="InterPro:IPR007421" /db_xref="InterPro:IPR018647" /db_xref="UniProtKB/Swiss-Prot:Q68D06" /translation="MNRCSLVVESCYPDLVINVGEVTLGEENRKKLQKIQRDQEKVRV TQAACALLNSGGGVIWMKLANNDEHLVEMGLDLEKSLRELVPSPHFEAFFETKQEGRC FYIFVKSWSSDISTEDSSVRPRICSLSSSLYRRSGTSVFIMDSRNAFDFLKAKRRDAE CEMINDFSPPSKMSKTVYQNSSEFDLAFEIFQTHRLEYGQILPFPESQFIEFKQFSTK HIQEYVKNTVPEYVPAFANTGGGYLFIGVDDKSKKVLGCAKENVDPSSLESVIAGAVS KLPVVHFCSSKPQVGFKTKIIDVFRMGELYGYFCVIKVEQFCCAVFSQAPNSWMVKDM LLCCLTAEEWVQRMMYVDPVEKDQGKVWNIKQLSNNSYFQGILILSRSWAVDLNLQGK QTVICDGLLVALNSPPVLYTILGEQDAEGQDYCTRTAFTLKQKLGILILSRSWAVDLN LQGKQTVICDGLLVALNSPPVLYTILGEQDAEGQDYCTRTAFTLKQKLVNTGGYTGRV CVMTKVLHLSPGGNPESLEDSHSAIDYPMSYNLANTKEMEALLQSLVIVLLSFRSFLS DQVGYEILNLLTAKQYELFSKNLDNSRELFIHGLPGSGKTIMAMKIIEKIRNTFKCKE DRILYVCENQLLRNFISNKKICQAVTRKTFMRNVCEKIEHIIIDEAQNFRLEDGDWYK KAKNISQRKKDCPGILWIFLDYFQTTHLTCTGLPPLSAQYPKEELTTVVRNATPIARF LQQEMQMVKGNPPRNFPREYLEILHKSTWVLDVPGNLETENLDLENMVIYVAEKCQYF LRNGYSPKDIIVLFSTTSEVEEYKDKFLTAMRKRTMSQINDAPICGDDMFDSVRRFSG LERNIVFGINPRAEDPTIFHNLLLCLASRARKHLFILQLSYK" assembly_gap 2827163..2827202 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2833797..>2834561 /locus_tag="TREES_T100005532" mRNA <2833797..>2834561 /locus_tag="TREES_T100005532" /product="HAUS augmin-like complex subunit 1" CDS 2833797..2834561 /locus_tag="TREES_T100005532" /codon_start=1 /product="HAUS augmin-like complex subunit 1" /protein_id="ELW61743.1" /db_xref="UniProtKB/Swiss-Prot:Q96CS2" /translation="MDAPQEKEAQVAAWLKKIFGDQPIPQYEVNPRTTEILHHLSERN REWDRDICLVIEDLKQKAREYESEAKHLQDLLMDSVNFSPASLSSTGSRYLNALADSA VAFETKDTSLTNFVPAVNDLTSDLFHTKSKNEEIKFELEKLDKNRTATLVLEKCLRED LKKAELHLSTERAKVDNRLQKMDFPKAKSEEFRFGIRTAEEQLSTRGMDASVSSVTSS SVRETSRAKMTDYTFEEKIGVLFRLSGESISCSSEN" assembly_gap 2841139..2841645 /estimated_length=507 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2843629..2843707 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2858853..>2865151) /locus_tag="TREES_T100005492" mRNA complement(join(<2858853..2859687,2860826..2861381, 2864143..>2865151)) /locus_tag="TREES_T100005492" /product="Schlafen family member 5" CDS complement(join(2858853..2859687,2860826..2861381, 2864143..2865151)) /locus_tag="TREES_T100005492" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]" /codon_start=1 /product="Schlafen family member 5" /protein_id="ELW61744.1" /db_xref="InterPro:IPR007421" /db_xref="InterPro:IPR018647" /db_xref="UniProtKB/Swiss-Prot:Q08AF3" /translation="MSLKLDLETNFAECVVDVGKIILGNKQREEMNPRLQEKQNETIQ QAICALLNSGGGVVKAEIENEDYNYARHGVGLDLPSIFRGYLDEMQQGNLFLIFVNSW NTEAAGVPFATLCSNLYHRYKIFTDVMEPQEALAFLRRRIQTLMNTNDSNPLGSQEAQ IGVKHEPAASAADLFDRAQLQYLEKLNFVETRHVEFKMFSADVSQCVREMLPKCVSAL ANTEGGYVFFGVHEETCQVIGCEKEKVDLTILRISIDGCIRKLPVHHFCTRRPEIQYT IKFLEVHDKGALYGYVCAVKVEQFCCAVFAKVPNSWHVKDNQVKQMSTKEWATWMIET DPGLKEKEGVICDALLISQNNTLILYTIFSKWDVGCKGYSMIVAHSLKESLVNMGGYT GRLCVTPFLNPDKTANTLYGPDLQIYPESYNFTIQNMEVLLQSLVIVLLGFKSLSDEL GSEVLNLLTDKQYELLSRNLHKTRKLFVHGLTGSGKTSLALMIMEKIRNVFHCQSENI LYVCENQPLKKFVSKKTTCQAVTRKTFMKYDFENIQHIVIDEAQNLRTEDGDWYGKAK AITERNKDRPGVLWVFLDYFQTNHLSCSGLPPLSAQHPSDTLTTVVRYAHPIADYLQK TLRKVRENPLPNLPPGALLMFQEPRWVQGVPGNVETSHHSDLEEMMIYVAEKCRSLWR NGYSPKDVAVLFSKAQEVEKYKENLLTAMRRRRMSQLDDESDLLVQIKDASDILTNHI VVDSAYRFSGLERNVVFAINPRAVKPVVYENLLLCLASRARKHLYILKLPEQQEDPSE L" assembly_gap 2862808..2862920 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2887367..2887397 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2888508..2888684 /estimated_length=177 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2889924..2889943 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2891328..>2931773 /locus_tag="TREES_T100005533" mRNA join(<2891328..2891546,2894707..2894814,2896998..2897138, 2897605..2897720,2899339..2899453,2902399..2902500, 2903540..2903677,2906175..2906470,2909129..2909306, 2912927..2913133,2913505..2913604,2915494..2915813, 2916616..2916738,2917093..2917179,2920510..2920644, 2921905..2922039,2924046..2924168,2924858..2924982, 2925603..2925699,2928136..2928340,2931235..>2931773) /locus_tag="TREES_T100005533" /product="HEAT repeat-containing protein 6" CDS join(2891328..2891546,2894707..2894814,2896998..2897138, 2897605..2897720,2899339..2899453,2902399..2902500, 2903540..2903677,2906175..2906470,2909129..2909306, 2912927..2913133,2913505..2913604,2915494..2915813, 2916616..2916738,2917093..2917179,2920510..2920644, 2921905..2922039,2924046..2924168,2924858..2924982, 2925603..2925699,2928136..2928340,2931235..2931773) /locus_tag="TREES_T100005533" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="HEAT repeat-containing protein 6" /protein_id="ELW61745.1" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q6AI08" /translation="MAVVPVAGLLPCVAPGAVPREPNPEQDDGFRRLSARLCALRPED SSSARTEIHLLFDQLISENYSDGSGVAAEDVSALLVQACRLVPLNQNHLVSKVSQLIH HLLNRLQVIVDEQHLDFLLAYTISAIQQCSSWTHMEILQALAALVYCNGSKCQKYLPD LLGKTGLLMKLSDLAQSDPEVRRAAVHCLANLCLSVPGQPYLEEPYQNICFQAFLTTL QSPKSSDMDDITFCMLLQNALRGIQSLLNGGKMKLKQTEELGALLAVLKKSMFHGLPG LNIEMPSVLYPTPLPQYDGRPPVKPQQSESSASRPTVNKKKKSKVKPKKTQQGEDEEE SGGEMEAAPVISTCRGNLREGSTRHTSSVGVQGLPLDGSGATGKDRVSSAFSSSSWKR VSSSESDYSDAEGGMQSKMRSYQAKVRQGALACFLSTIKSIEKKVLYGYWSAFVPDTP ELGSPQSVSLMTLTLKDPSPKTRACALQVLSAILDGSKQFLSVAEDTSDHRRAFTPFS VMIASSIRELHRCLLLALAAESSSQTLTQIIKCLANLVSNAPYNRLKLSLLTKVWTQI KPYIRHKGAIVSTHAPLPEVQLLLQQPCSSGLSHSSSATPHLSPSDWWKKAPAGPSLE EASVSSPQGSSEPCWLIRLCISTIVLPKEDSCSGSDAGSAAGSTYEPSPMRLEALQVL AHLARGYFSMAQVYLMELGEVICKCMGEADPSIQLHGAKLLEELGTGLTQQYKPDSTI APDQRVPVFLVVMFWTMMLNGPLPRALQNSEHPTLQASACDALSSILPEAFSSLPVVM FWTMMLNGPLPRALQNSEHPTLQASACDALSSILPEAFSSLPNDRQILCITMLLGLND SKNRLVKAATSRALGVYVLFPCLRQDVIFVADTANAILMSLQDKSLNVRAKAAWSLGN LTDTLIVNMETSDPSFQEEFSGLLLLKMLRSAIEASKDKDKVKSNAVRALGNLLHFLQ PSHIEKPRFAEIIEESIQALISTVLIEAAMKVRWNACYAMGNVFKNPALPLGIAPWTS QAYNALTSVVTSCKNFKVRIRSATALSIPNKREQYGSVDQYAQIWDALVTALQKSEDT TDFLEFKYCASLRTQICQALIHLLSLASASDLPCINRTLTLNGDMIQSYILQFLKSGA EEDDTGAPRSPQERDQMVTMALKHLNSVQALAGDTAKRAVVGFLEDTLAIYFDSSG" assembly_gap 2922417..2922520 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2944126..2944526 /estimated_length=401 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2950724..2950739 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2951574..2951712 /estimated_length=139 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2953965..2954178 /estimated_length=214 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2959480..2959742 /estimated_length=263 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2967715..2967745 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2969100..2969533 /estimated_length=434 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2984506..2984528 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2990181..2990849 /estimated_length=669 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3029384..3029963 /estimated_length=580 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3031214..3032089 /estimated_length=876 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3052996..>3115330 /locus_tag="TREES_T100005534" mRNA join(<3052996..3053339,3053485..3053642,3054170..3054299, 3058427..3058626,3063793..3064057,3066005..3066240, 3090106..3090266,3097599..3097734,3101814..3102008, 3105632..3105763,3115182..>3115330) /locus_tag="TREES_T100005534" /product="Hepatocyte nuclear factor 1-beta" CDS join(3052996..3053339,3053485..3053642,3054170..3054299, 3058427..3058626,3063793..3064057,3066005..3066240, 3090106..3090266,3097599..3097734,3101814..3102008, 3105632..3105763,3115182..3115330) /locus_tag="TREES_T100005534" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0016563 - transcription activator activity [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO_process: GO:0045941 - positive regulation of transcription [Evidence IEA]" /codon_start=1 /product="Hepatocyte nuclear factor 1-beta" /protein_id="ELW61746.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR006897" /db_xref="InterPro:IPR006899" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR010982" /db_xref="InterPro:IPR023219" /db_xref="UniProtKB/Swiss-Prot:Q5RER5" /translation="MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPNFGVKLE TLPLSPGSGAEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEE AAEQRAEVDRMLRPSAGRPWSRRLILLAQASARDLRAFPTGSGLGLGDPELRGRVPCR EAATRTEGAQRLLDFMWVPSHCAVGRSPGVASDTAGPSFQGRGGRTEVAPSEDPWRAA KMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL RQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSQGPGQSDDACSEPTNKKMRRNRFKW GPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRV YNWFANRRKEEAFRQKLAMDAYSSNQTHSLNPLLSHGSPHHQPSTSPPNKLSGVRYNQ QGNSEVTSSSTISHHGNSALVTSQSVLQQVSPASLDPGHNLLSPDGKMQISVSGGGLP PVSTLTNIHSLSHHNPQQSQNLIMAPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAAL LPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYTHKQEPPQYSHTSR FPSAMVVTDTSSISTLTNMSSSKQVMPVVSSASLVMPTHHLLCAQQQNPVFHTITLPG AVMEKPSELTSTCERSLLT" assembly_gap 3054434..3054855 /estimated_length=422 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3068313..3068821 /estimated_length=509 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3076871..3077014 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3088419..3088769 /estimated_length=351 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3091862..3091892 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3102564..3102594 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3122653..3122685 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3123252..3123282 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3128909..3128930 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3135859..3135994 /estimated_length=136 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3139788..3140749 /estimated_length=962 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3151250..3151368 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3156191..>3314792 /locus_tag="TREES_T100005535" mRNA join(<3156191..3156277,3158284..3158488,3165191..3165474, 3167633..3167818,3170680..3170823,3172442..3172553, 3174802..3174916,3176365..3176455,3180270..3180392, 3180810..3180960,3181134..3181209,3182498..3182569, 3186133..3186225,3209695..3209735,3215630..3215751, 3222987..3223117,3223766..3223871,3224455..3224566, 3230104..3230406,3232286..3232519,3233423..3233500, 3235886..3236082,3236847..3237095,3238942..3239072, 3246525..3246643,3246840..3246905,3254268..3255197, 3267767..3268696,3280088..3280675,3282135..3282298, 3283758..3283854,3286118..3286266,3312312..3312422, 3314661..>3314792) /locus_tag="TREES_T100005535" /product="Synergin gamma" CDS join(3156191..3156277,3158284..3158488,3165191..3165474, 3167633..3167818,3170680..3170823,3172442..3172553, 3174802..3174916,3176365..3176455,3180270..3180392, 3180810..3180960,3181134..3181209,3182498..3182569, 3186133..3186225,3209695..3209735,3215630..3215751, 3222987..3223117,3223766..3223871,3224455..3224566, 3230104..3230406,3232286..3232519,3233423..3233500, 3235886..3236082,3236847..3237095,3238942..3239072, 3246525..3246643,3246840..3246905,3254268..3255197, 3267767..3268696,3280088..3280675,3282135..3282298, 3283758..3283854,3286118..3286266,3312312..3312422, 3314661..3314792) /locus_tag="TREES_T100005535" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]" /codon_start=1 /product="Synergin gamma" /protein_id="ELW61747.1" /db_xref="InterPro:IPR000261" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" /db_xref="UniProtKB/Swiss-Prot:Q9JKC9" /translation="MDAHDLFRRLGAGAKFNVRRFSADAARFQVGKRKYNFESSEGLQ GLDFFGNKKSVPVESGAPGTHQEVQNEDEKEEHLTAGKEEQNKRKRKKKKMTSEVTVG EEGTTIQWMPSVEAKIEDKKVKGEHKLTSGKLEHLRQEKINFIRNKHKIHVQGTDLPD PIATFQQLDQEYKINSRLLQNILDAGFQLCYMINFIRNKHKIHVQGTDLPDPIATFQQ LDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPI LMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPK SSKKFACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFV GSETGKLLAMRQLVKKGFDPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQR DNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHK GKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLLSKEKKRMIKKPLERESIS TTPKYFLEKAKAKRFMFPVTGGIRPPQAGLMPMQQQGFPMVSVMQPNMQGMMGMNYSS QMSQAPIAMQAGIPMGPMPAAGMSYLGQAPFLGMRPPGPQYAPDIQKQFAEEQQKRFE QQQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMH PTPASHPKKPDCPTSSHSTKTVSPSPAFLDEEEFSDFMQGPVEVPTCGPSSMSQPFQS LHPTTPLGQLHIQKAGAQPLPPGQIPVSFALHGVPGQIPYSSTASASHSVQKAGPSLD EKLLVSCDINTSGQEQINLNTSEVGRKALGPGSSKNYPSLTANNGVAVDGCVSGTTTA EAEKTSDQNLSIEESGMGVFPSQDPVQPRMPPWIYNESLVPDAYKKILETTMTPTGID TAKLYPILMSSGLPRETLGQIWALANRTTPGKLTKEELYTVLAMIAVTQRGVPAMSPD TLNQFPAAPIPTLSGFPMTLPTPVSQPTVIPSGPAASMPLNLGQPVMGINLVGPVGGA AAQSSSGFMPTYPANQVGKPEEDDFQDFQDATKSGSLDDSFTDFQELPASSKTNPQHG NSAPSLLMPLPGTKALSSVDKYAVFKGIAADKSSENNVPFGEPGDKYSAFRELEQTTA ESKSLEFRSAGTDDGFTDFKTADSVSPVEPPTKDKTFQASFPSGPIQQKQQTQVKTPL NLADLDMFSSVNSSEKQLSFSTTFSASKSVSSRPQPTASTPTVTALASTKTSSLADDF GEFNLFGEYSSPAPAGEQDDFADFMAFGNSSISSEQKADDKYDALKEETNPLPLTSNL GSTVKSGQNPAAVSTKYDVFKQLSLEGSGLGVEDLKDSTASGKNDDDFADFHSNKFSS INSDKSLGEKAVAFRHTKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQFDMKLADVG GDLKHVMSDSSLDLPTVSGQHPPAAEFRSAGTDDGFTDFKTADSVSPVEPPTKDKTFQ ASFPSGPIQQKQQTQVKTPLNLADLDMFSSVNSSEKQLSFSTTFSASKSVSSRPQPTA STPTVTALASTKTSSLADDFGEFNLFGEYSSPAPAGEQDDFADFMAFGNSSISSEQKA DDKYDALKEETNPLPLTSNLGSTVKSGQNPAAVSTKYDVFKQLSLEGSGLGVEDLKDS TASGKNDDDFADFHSNKFSSINSDKSLGEKAVAFRHTKEDSASVKSLDLPSIGGSSVG KEDSEDALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPAADIEDLKYATFGSY SSNFAVSTLTSSDWSDRDDAAQGRKLSPFVLSENGASSAASVLQKKETSFGSLENITM TSFSKVTTFASEDPLPETAFPAFASFKDAVPQTSEQKEYESGDYKDFTRDLPTAERSQ EATCPSPASSSASHETPNECSDDFGEFQSEKPKISKFDFLVATSQSKMKSSEEMIKSE LATFDLSVQGSHKRSLSLGDKEISRSSPSPALEQPFRDRSNTLSEKPALPVIRDKYKD LTGEVEVIKKANDTLNGISSSSVCTEVIQSAQGMEYLLGVVEVYRVTKRVELGIKATA VCSEKLQQLLKDIDKVWNNLIGFMSLATLTPDENSLDFSSCMLRPGIKNAQELACGVC LLNVDSRSRAFNSETDSFKLAYGGHQYHASCANFWINCVEPKPPGLVLPDLL" assembly_gap 3175904..3175980 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3195671..3195790 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3204496..3205141 /estimated_length=646 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3256436..3262784 /estimated_length=6349 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3299344..3299524 /estimated_length=181 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3305196..3305288 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3321511..>3342784) /locus_tag="TREES_T100005491" mRNA complement(join(<3321511..3321994,3342502..3342644, 3342749..>3342784)) /locus_tag="TREES_T100005491" /product="Dual specificity protein phosphatase 14" CDS complement(join(3321511..3321994,3342502..3342644, 3342749..3342784)) /locus_tag="TREES_T100005491" /note="GO_function: GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA]; GO_function: GO:0016791 - phosphatase activity [Evidence IEA]; GO_function: GO:0017017 - MAP kinase tyrosine/serine/threonine phosphatase activity [Evidence IEA]; GO_process: GO:0006470 - protein dephosphorylation [Evidence IEA]; GO_process: GO:0016311 - dephosphorylation [Evidence IEA]" /codon_start=1 /product="Dual specificity protein phosphatase 14" /protein_id="ELW61748.1" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR020420" /db_xref="InterPro:IPR020422" /db_xref="UniProtKB/Swiss-Prot:O95147" /translation="MPTIYNGEEQGLKQEGMIFPRSDPADKRYRIRVSGLGPDTCSAA CGPTAVARRSDIRWDRGSVASNRHLLQARGITCIVNATIEIPNFNWPQFEYVKVPLAD MPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAY NWVKARRPVIRPNVGFWRQLIDYERQLFGKSTVKMVQTPYGVVPDVYEKESRHLMPYW GI" assembly_gap 3332353..3332383 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3341837..3342081 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3348033..3348063 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3349804..3350548 /estimated_length=745 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3356260..3358466 /estimated_length=2207 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3359066..>3366579 /locus_tag="TREES_T100005536" mRNA join(<3359066..3359136,3366255..>3366579) /locus_tag="TREES_T100005536" /product="Peptidyl-prolyl cis-trans isomerase A" CDS join(3359066..3359136,3366255..3366579) /locus_tag="TREES_T100005536" /note="GO_function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO_process: GO:0006457 - protein folding [Evidence IEA]" /codon_start=1 /product="Peptidyl-prolyl cis-trans isomerase A" /protein_id="ELW61749.1" /db_xref="InterPro:IPR002130" /db_xref="InterPro:IPR015891" /db_xref="UniProtKB/Swiss-Prot:Q5R8S7" /translation="MSDGPECCLEQSTIMPKDSKSVWRLFQGGDFPHHNSTGGKSTYG EKFKDENFILKHTGPGILSMANAGPNTNGSQFFSCTAKTEWLDDKHVVFGKVKEGMNI MEAMECFGSKNGRASKKFAIADCGRPAFS" gene complement(<3370391..>3426131) /locus_tag="TREES_T100005490" mRNA complement(join(<3370391..3370527,3375186..3375296, 3393577..3393649,3396392..3396480,3398924..3398966, 3398980..3399079,3403017..3403108,3418841..3418900, 3426072..>3426131)) /locus_tag="TREES_T100005490" /product="Transcriptional adapter 2-alpha" CDS complement(join(3370391..3370527,3375186..3375296, 3393577..3393649,3396392..3396480,3398924..3398966, 3398980..3399079,3403017..3403108,3418841..3418900, 3426072..3426131)) /locus_tag="TREES_T100005490" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Transcriptional adapter 2-alpha" /protein_id="ELW61750.1" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR014778" /db_xref="InterPro:IPR017884" /db_xref="UniProtKB/Swiss-Prot:O75478" /translation="MEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDF PVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFAS TLAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRD IDFVEDDSDILHVMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHACARTYDHLK KTRDEERLKRTMLSEVLQYIQDSSACQQWLRRQADM" assembly_gap 3380791..3380866 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3407641..3407697 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3433873..3433899 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3455912..>3470103) /locus_tag="TREES_T100005489" mRNA complement(join(<3455912..3456169,3456623..3456747, 3462411..3462536,3467715..3467960,3468458..3468544, 3470046..>3470103)) /locus_tag="TREES_T100005489" /product="hypothetical protein" CDS complement(join(3455912..3456169,3456623..3456747, 3462411..3462536,3467715..3467960,3468458..3468544, 3470046..3470103)) /locus_tag="TREES_T100005489" /codon_start=1 /product="hypothetical protein" /protein_id="ELW61751.1" /db_xref="UniProtKB/Swiss-Prot:Q8N4C9" /translation="MDTILVFSLIVTSYDANRKALRDSSCQVEQLPGLFPKDVRSIRD LLMKETHTEAKRATFTQNWTVATLQCLGSESKVKVNLVYSEKKPKVKHILKNLRVITA PHGNSSSSPRCRLTLTAKFQTGSMLKGQAVLPGISQCKVYPVMEASLETFSTTNTSIA PRTTKGEKTTSIETDENLEKRRKWSIVVKSLIAVTLLLSGVAITVFVIFEVPCPSRCH RARQLCQCQRLCRKQKKGDQQPEIPESQLDSQPKKESILYLISVTCLEKMGLICKRWV TGSCFNYEANVSSSFMCQKIDRY" assembly_gap 3466741..3467067 /estimated_length=327 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3485559..3485578 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3490324..3490670 /estimated_length=347 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3496162..3496264 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3498815..3499398 /estimated_length=584 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3512460..>3767575 /locus_tag="TREES_T100005537" mRNA join(<3512460..3512686,3541982..3542114,3543416..3543554, 3551097..3551206,3552757..3552838,3555206..3555304, 3556871..3556977,3562826..3562936,3570298..3570507, 3572403..3572504,3575047..3575217,3576450..3576611, 3576888..3577051,3582418..3582568,3583616..3583719, 3587731..3587812,3588250..3588395,3589258..3589408, 3590715..3590849,3591308..3591454,3591806..3591994, 3592695..3592795,3594041..3594129,3601863..3601987, 3612481..3612594,3613804..3613917,3616992..3617081, 3618774..3618892,3633755..3633898,3634694..3634790, 3635974..3636081,3639582..3639638,3650112..3650153, 3653752..3653967,3654732..3654887,3657111..3657314, 3682560..3682829,3688478..3688575,3694954..3695074, 3696172..3696282,3717331..3717474,3719108..3719228, 3723735..3723831,3727368..3727464,3728874..3729009, 3737807..3737984,3740457..3740569,3745336..3745445, 3755092..3755403,3756052..3756222,3763419..3763555, 3767452..>3767575) /locus_tag="TREES_T100005537" /product="Acetyl-CoA carboxylase 1" CDS join(3512460..3512686,3541982..3542114,3543416..3543554, 3551097..3551206,3552757..3552838,3555206..3555304, 3556871..3556977,3562826..3562936,3570298..3570507, 3572403..3572504,3575047..3575217,3576450..3576611, 3576888..3577051,3582418..3582568,3583616..3583719, 3587731..3587812,3588250..3588395,3589258..3589408, 3590715..3590849,3591308..3591454,3591806..3591994, 3592695..3592795,3594041..3594129,3601863..3601987, 3612481..3612594,3613804..3613917,3616992..3617081, 3618774..3618892,3633755..3633898,3634694..3634790, 3635974..3636081,3639582..3639638,3650112..3650153, 3653752..3653967,3654732..3654887,3657111..3657314, 3682560..3682829,3688478..3688575,3694954..3695074, 3696172..3696282,3717331..3717474,3719108..3719228, 3723735..3723831,3727368..3727464,3728874..3729009, 3737807..3737984,3740457..3740569,3745336..3745445, 3755092..3755403,3756052..3756222,3763419..3763555, 3767452..3767575) /locus_tag="TREES_T100005537" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0009374 - biotin binding [Evidence IEA]; GO_function: GO:0016874 - ligase activity [Evidence IEA]; GO_process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Acetyl-CoA carboxylase 1" /protein_id="ELW61752.1" /db_xref="InterPro:IPR000022" /db_xref="InterPro:IPR000089" /db_xref="InterPro:IPR005479" /db_xref="InterPro:IPR005481" /db_xref="InterPro:IPR005482" /db_xref="InterPro:IPR011053" /db_xref="InterPro:IPR011054" /db_xref="InterPro:IPR011761" /db_xref="InterPro:IPR011762" /db_xref="InterPro:IPR011763" /db_xref="InterPro:IPR011764" /db_xref="InterPro:IPR013537" /db_xref="InterPro:IPR016185" /db_xref="UniProtKB/Swiss-Prot:Q13085" /translation="MDEPSSLAKPLELNQHSRFIIGSVSEDNSEDEISNLVKLDLLEE KEGSLSPASVSSDTLSDLGISSLQDGLALHIRSSMSGLHLVKQGRDRKKIDSQRDFTV ASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPE DLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKL PELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSR RILNVPQELYEKGYVKDVDDGLKAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLF RQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAP AAIATPAVFEHMEQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQCAVKLAKMVG YVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIK DIRMMYGVSPWGDSPIDFENSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFR SNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTT VEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSI SNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDV HRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQ YIVEDGGHVFAGQCYAEIEVMKMVMTLTAAESGCIHYVKRPGAALDPGCVIAKMQLDN PSKVQQAELHTGSLPQIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSRVKD WVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPS QQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLR VETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPT LTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYG HQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQ LKDNTCVVEFQFMLPTSHPNRMSFSSNLNHYGMTHVANVSDVLLDNSFTPPCQRMGGM VSFRTFEDFVRIFDEVMGCFCDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIK TDCDIEDDRLAAMFREFTQQNKATLVEHGIRRLTFLVAQKREFPKFFTFRARDKFEED RIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRA IIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIM DPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLD ISLYKEVTDSRTAQIGMVAWKMTLKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFL RASELARAEGIPRIYVAANSGARIGLAEEIRHMFHVAWVDPEDPYKGFKYLYLTPQDY KRVSALNSVHCEHVEDEGESRYKITDIIGKEEGLGTENLRASGMIAGESSLAYDEIIT ISLVTCRAIGIGAYLVRLGQRTIQVENSHIILTGAGALNKVLGREVYTSNNQLGGIQI MHNNGVTHCTVCDDFEGVFTILLWLSYMPKSVHSSVPLLSSKDPIDRIIEFVPTKAPY DPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVET RTVELSIPADPANLDSEAKIIQQAGQVWFPDSAFKTYQAIKDFNREGLPLMVFANWRG FSGGMKDMYDQVLKFGAYIVDGLRECSQPVLVYIPPQAELRGGSWVVIDSTINPRHME MYADRESRGSVLEPEGTVEIKFRRKDLVKTMRRVDPVYIRLAERLARQPAMQPLSCAH TERALTAALTGTTIALASSFQACSSPATQQSGEDNGEPARPQREAADDVAPSVPVAAS VQRFLVTAECDGQVYLIAGTPELSPAERKELENKLKEREEFLIPIYHQVAVQFADLHD TPGRMQEKGVINDILDWKTSRTFFYWRLRRLLLEDLVKKKIHNANPELTDGQIQAMLR RWFVEVEGTVKAYVWDNNKDLVEWLEKQLTEEDGVRSVIEENIKYISRDYVLKQIRSL VQANPEVAMDSIVHMTQHISPTQRAEVVRILSTMDSPST" assembly_gap 3529516..3529572 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3571336..3571366 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3694302..3694332 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3714767..3714919 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3746072..3746421 /estimated_length=350 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3748938..3749150 /estimated_length=213 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3776574..3776596 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3784423..3784436 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3786892..3786956 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3791823..3792867 /estimated_length=1045 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3797586..>3797879 /locus_tag="TREES_T100005538" mRNA <3797586..>3797879 /locus_tag="TREES_T100005538" /product="High mobility group nucleosome-binding domain-containing protein 4" CDS 3797586..3797879 /locus_tag="TREES_T100005538" /note="GO_component: GO:0000785 - chromatin [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]" /codon_start=1 /product="High mobility group nucleosome-binding domain-containing protein 4" /protein_id="ELW61753.1" /db_xref="InterPro:IPR000079" /db_xref="UniProtKB/Swiss-Prot:Q2YDK4" /translation="MPNRKAKGEAKGDKAKVKDEPQRRSARLSANPATPKPEPKSKKA PEKKGEKVPKGKKGKADAGKVGDNPAENGDARTDQAQKAEGEVCAVFITVSFW" gene complement(<3799340..>3955642) /locus_tag="TREES_T100005487" mRNA complement(join(<3799340..3799662,3807382..3807488, 3830180..3830251,3842653..3842733,3844570..3844637, 3876963..3877046,3878768..3878932,3879469..3879664, 3883411..3883525,3948953..3949090,3950981..3951406, 3954383..3954574,3955558..>3955642)) /locus_tag="TREES_T100005487" /product="Protein AATF" CDS complement(join(3799340..3799662,3807382..3807488, 3830180..3830251,3842653..3842733,3844570..3844637, 3876963..3877046,3878768..3878932,3879469..3879664, 3883411..3883525,3948953..3949090,3950981..3951406, 3954383..3954574,3955558..3955642)) /locus_tag="TREES_T100005487" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]" /codon_start=1 /product="Protein AATF" /protein_id="ELW61754.1" /db_xref="InterPro:IPR012617" /db_xref="UniProtKB/Swiss-Prot:Q9NY61" /translation="MAGPLGLQLEQLLNPRPREADPEADPEDATAARVIDRFDEGEDG EDDCLAVGSIRKLASASLLDTDERYLGKATSRKALKEDDWEQSLPGSFHREVSEEEGS GDEDSEGLGLEESEEDDLSAAEEQECGDDEDSSLAWRKSRRRSAKTPGFSVQSISDFE KFTEGMDDLGSSEEEDEEEESGMEEGDAEEDVEDESEEERAGDKNSEDDGVVMTFSSV QVSEEVEKGRAVKNQIALWDQLLEGRIKLQKALLTTNQLPQPDVFPVFKDKGGPEFAS ALKNSHKALKALLRSLVELQDELLFQYPDTRYLVDGTKPRAESEEISSEDDELVEEKK QRRAPPKRKLEMDDYPSFMAKRFADFTVYRNRTLQKWHDKTKLGSGKLGKGFGAFERS ILTQIDHILMDKERLLRRTQTKRSIYRVVGKPEPAAQPIPECLPGEPEVLPQVPANAH LKDLDEEIFDDDDFYHQLLRELIERKTSSLDPNDQVAMGRQWLAIQKLRSKIHKKVDR KASKGRKLRFHVLSKLLSFMAPIDQTTMNDDARYKELGQKQTLQPLVFAVQDLLACGE VEDLEGEREQGQSCIDLSLANSILGTRATRTDLAMLPTQPEAGSSAPRVPWPVQLLIQ MQKPIDFLGRRYQEIAWEGAGFRVCLVRTTTTGSLTTTNKERYHCRLLWVEEESVEGE L" assembly_gap 3801598..3801906 /estimated_length=309 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3802107..3802138 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3824229..3824333 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3910093..3910195 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3917932..3921745 /estimated_length=3814 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3963757..>3968698) /locus_tag="TREES_T100005486" mRNA complement(join(<3963757..3964136,3964495..3964660, 3965932..3966209,3966306..3966532,3968529..>3968698)) /locus_tag="TREES_T100005486" /product="LIM/homeobox protein Lhx1" CDS complement(join(3963757..3964136,3964495..3964660, 3965932..3966209,3966306..3966532,3968529..3968698)) /locus_tag="TREES_T100005486" /note="GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="LIM/homeobox protein Lhx1" /protein_id="ELW61755.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR001781" /db_xref="InterPro:IPR009057" /db_xref="UniProtKB/Swiss-Prot:Q5IS89" /translation="MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFS REGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGE ELYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESAN VSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETG LNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPF SFYGDYQSEYYGPGGNYDFFPQGPPSSQAQTPVDLPFVPSSGPSGTPLGGLEHPLPGH HPSSEAQRFTDILAHPPGDSPSPEPSLPGPLHSMSAEVFGPSPPFSSLSVNGGASYGN HLSHPPEMNEAAVW" assembly_gap 3969365..3973724 /estimated_length=4360 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3977710..3977803 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4030557..4030592 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4039319..4039349 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4066025..4066109 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4093374..4093420 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4093833..4094027 /estimated_length=195 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4101638..4101921 /estimated_length=284 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4161874..4161904 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4162797..4163161 /estimated_length=365 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4168050..4168467 /estimated_length=418 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4171997..4172085 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4183789..4183802 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4200307..4200443 /estimated_length=137 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4243577..4243620 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4244700..4244829 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4251150..4251209 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4281798..4290478 /estimated_length=8681 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4310542..4311515 /estimated_length=974 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4315417..4315432 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4316012..4316200 /estimated_length=189 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4321348..>4337803) /locus_tag="TREES_T100005485" mRNA complement(join(<4321348..4321442,4332015..4332134, 4332233..4332365,4336969..4337062,4337259..>4337803)) /locus_tag="TREES_T100005485" /product="rRNA methyltransferase 1, mitochondrial" CDS complement(join(4321348..4321442,4332015..4332134, 4332233..4332365,4336969..4337062,4337259..4337803)) /locus_tag="TREES_T100005485" /note="GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO_process: GO:0006396 - RNA processing [Evidence IEA]" /codon_start=1 /product="rRNA methyltransferase 1, mitochondrial" /protein_id="ELW61756.1" /db_xref="InterPro:IPR001537" /db_xref="InterPro:IPR013123" /db_xref="UniProtKB/Swiss-Prot:Q6IN84" /translation="MGLLSQGPTWGCLGRLVTRHFSQAARRGERPGGEELSRLRLDDL APAPRLELLFGLSPCLLALRATRRRVARLLLQAGRAGLQGERAELLRVAEARGIPVLR PRRQKLDALCRHQVHQGVCMEVSPMYPKPWTEASEATPEDCPQRLWLVLQELQDPRNL GAVLRSAHFLGVDKVITSQRNSCPLTPVVSKASAGAMEVMDVFSTDDLAGFLQAKARQ GWLVAGTVACLGPESAQPPKTPTISCLEFLWDRPTLLVLGNEGSGLSPEVQASCQLLL TILPGRQLPPGLGSLNVSVAAAAVPEEEGLGLGFLLPPLQLAICSSDTRLLC" assembly_gap 4321911..4322219 /estimated_length=309 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4338938..4338957 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4339541..>4346149) /locus_tag="TREES_T100005484" mRNA complement(join(<4339541..4339582,4339698..4339763, 4339886..4340023,4340617..4340746,4341363..4341457, 4344116..4344325,4346048..>4346149)) /locus_tag="TREES_T100005484" /product="Dehydrogenase/reductase SDR family member 11" CDS complement(join(4339541..4339582,4339698..4339763, 4339886..4340023,4340617..4340746,4341363..4341457, 4344116..4344325,4346048..4346149)) /locus_tag="TREES_T100005484" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Dehydrogenase/reductase SDR family member 11" /protein_id="ELW61757.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="UniProtKB/Swiss-Prot:Q6UWP2" /translation="MGNKSPEKNEMQLAILEQGGTQEKFVTGDLWIALELAAECKSAG YPGTLIPYRCDLSNEEDILSMFSAVRSQYSGVDICINNAGLARPDTLLSGSTSGWKDM FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPQSVAHFYSATKYAVTA LTEGLRQELREAQTHIRATAWQSSSPERVLSVGQCISPGVVETQFAFKLFDKDPEKAA AAYEHMKCLKPEDVAEAVLYVLGTPPHVQIGDIQMRPTEQVT" assembly_gap 4346398..4346411 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4346869..4347211 /estimated_length=343 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4350407..>4418117) /locus_tag="TREES_T100005483" mRNA complement(join(<4350407..4350610,4352695..4352943, 4353476..4353624,4353706..4353831,4354158..4354305, 4357486..4357680,4358816..4358990,4360012..4360215, 4366818..4366931,4367036..4367161,4374671..4374769, 4377982..4378235,4380484..4380564,4417868..4417954, 4418025..>4418117)) /locus_tag="TREES_T100005483" /product="Gametogenetin-binding protein 2" CDS complement(join(4350407..4350610,4352695..4352943, 4353476..4353624,4353706..4353831,4354158..4354305, 4357486..4357680,4358816..4358990,4360012..4360215, 4366818..4366931,4367036..4367161,4374671..4374769, 4377982..4378235,4380484..4380564,4417868..4417954, 4418025..4418117)) /locus_tag="TREES_T100005483" /codon_start=1 /product="Gametogenetin-binding protein 2" /protein_id="ELW61758.1" /db_xref="UniProtKB/Swiss-Prot:Q9H3C7" /translation="MARLVAVCRDGEEEFPFERRQIPLYIDDTLTAERCALEEECVAT PRRGLLSSRPHKLAFAMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQDLSIAMV VTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSVTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGEGSSSSVSSEKLS TDKRSSEDHRKDSKCRIIFHYGPFQGTARGCWMDVWELMSQECRDEVVLIDSSCLLET LETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCC ETDFIAHLLGRAEPEFAGGRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEE QTWQMLFYLGVDALRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKN RRKNKCVCDIPAPLQTADEKEVSQEKETDFLENSCKACGSTEDGNSCVEVIVTNENTS CTCPSSGNLLGSPKIKKGLSPHCNGSDCGYSSSMEGSETGSREGSDVACTEGICNHDE HGDDSCVHHCEDKEDDGDSCVECWANSEENNTKGKNKKKKKKSKLLKCDEHIQKLGSC ITDPGSRETSGNTVHTVFHRDKTKDAHTESCCSSEKGGQPLPWFEHRKNVPQFAEPTE TSFVPDSGKGAKSLVELLDESECTSDEEIFISQDEIQSFMANNQSFYSNREQYRQHLK EKFNKYCRLNDHKRPICSGWLTTAGAN" assembly_gap 4354548..4354974 /estimated_length=427 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4369719..4369734 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4379787..4379930 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4392799..4410946 /estimated_length=18148 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4418146..4418834 /estimated_length=689 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4430697..>4465801 /locus_tag="TREES_T100005539" mRNA join(<4430697..4430853,4433555..4433791,4435219..4435298, 4440373..4440508,4440843..4440991,4444400..4444513, 4445612..4445744,4446328..4446397,4446925..4447027, 4447696..4447792,4447929..4448005,4448509..4448526, 4449586..4449676,4450072..4450243,4453084..4453157, 4453940..4454061,4455252..4455365,4455713..4455970, 4456171..4456323,4457927..4458034,4458943..4459013, 4459789..4459892,4460725..4460891,4461017..4461146, 4463907..4463992,4464418..4464723,4465688..>4465801) /locus_tag="TREES_T100005539" /product="Myosin-XIX" CDS join(4430697..4430853,4433555..4433791,4435219..4435298, 4440373..4440508,4440843..4440991,4444400..4444513, 4445612..4445744,4446328..4446397,4446925..4447027, 4447696..4447792,4447929..4448005,4448509..4448526, 4449586..4449676,4450072..4450243,4453084..4453157, 4453940..4454061,4455252..4455365,4455713..4455970, 4456171..4456323,4457927..4458034,4458943..4459013, 4459789..4459892,4460725..4460891,4461017..4461146, 4463907..4463992,4464418..4464723,4465688..4465801) /locus_tag="TREES_T100005539" /note="GO_component: GO:0016459 - myosin complex [Evidence IEA]; GO_function: GO:0003774 - motor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]" /codon_start=1 /product="Myosin-XIX" /protein_id="ELW61759.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR001609" /db_xref="UniProtKB/Swiss-Prot:Q96H55" /translation="MTSPPLVYLIQQPCPKDSYNEILEEDKCRPNGQSDHQGNYQNNK VNEKPSSPAHVPQAVWRPGQRITGGEGQARAPAEGSGEVGQTADLPPHRGTLREPAAS ASEQRFRAPPGSLRFRAGRFRAPGRGAAPGELAVDGVLVFLSFHGCRFYGVQLAFGVN GHGPGSEAQDRESLRDLQEFLGGEAPLHQLDDLTKVNPVTLETVLRCLQARYGADIFY TNAGCTLVALNPFKPVPQLYSTELMREYHTAPQPQKLKPHVFTVGEQTYRNVRSLIEP VNQSIVVSGESGAGKTWTSRCLMKFYAIVAASPTSWESHKIAERIEQRILNSNPVMEA FGNACTLRNNNSSRFGKFIQLQLNRAQQMTGAAVQTYLLEKTRVACQASNERNFHIFY QICKGASVDERLQWHLPEGATFSWLPNPEKTLEEDCFDVTREAMLHLGIDTPTQNNIF KGLVLAQALAGLLHLGNICFADSEDEGQPCQLKDEATCSIQTSALLLQIPEDTLLETL RIRTIRAGRQQQVFRKPCSRAECDTRRDCLAKLVYARLFDWLVSVINSSICADPDSWT TFIGLLDVYGFESFPDNSLEQLCINYANEKLQQHFVAHYLRAQQEEYAAEGLEWSFVN YQDNQTCLDLIEGSPISICSLINEECRLNPQLQTRIESALAGSPCLGHNRLSPEPSFV VVHYAGPVRYHTAGLVEKNKASTGLQPGGLMLHTQELPSCIRSPSDIFPESRDPVPPE LTRLLQQSQDPLLMVLFPTNPEEKTQEEPAGQSRAPVLTVVSKFKASLEQLLQVLHST TPHYIRCIKPNSQGQAQTFLQEEVLSQLEACGLVETIHISAAGFPIRVSHQNFVERYK LLRRFHSRTSPGTHDPHPATGRSEWPVHTKEAMLQPLVQDILHTLPGLTQAAATPGDP AGATAAPVHCGRTKVFMTDSTLELLERGRAQVLEQCACCIQAGWRRHRRRKQARQRWA ATRIQAAIRSWLTRKHIQRLHTAATAIKRVWRKWRIRMASLAAKELDGVEEKHLSQVP HFLSSSQLTPEQTGFLGAIIRLWPLGLVLANAAVGVRGFQRRLVVWACLQLPTSSPSG YALQAAQQDQAGVTSIRALPQGSVKFHCRKSPLRYADICPEPSPYTVTGFNQILLERH " assembly_gap 4433845..4434235 /estimated_length=391 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4451807..4451904 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4462613..4462875 /estimated_length=263 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4466665..>4468867) /locus_tag="TREES_T100005482" mRNA complement(join(<4466665..4466846,4468756..>4468867)) /locus_tag="TREES_T100005482" /product="Zinc finger HIT domain-containing protein 3" CDS complement(join(4466665..4466846,4468756..4468867)) /locus_tag="TREES_T100005482" /codon_start=1 /product="Zinc finger HIT domain-containing protein 3" /protein_id="ELW61760.1" /db_xref="UniProtKB/Swiss-Prot:Q9CQK1" /translation="MAVDCAVCPLDDDDSIADFLNSDEEEDRVSLQNLKNLEDSATLR TLLLNPHLRQLMVSLDQGDNKAKLMRACMQEPLFVEFADCCLRIVEPSQSEDS" gene complement(<4475027..>4475392) /locus_tag="TREES_T100005481" mRNA complement(<4475027..>4475392) /locus_tag="TREES_T100005481" /product="Zinc finger HIT domain-containing protein 3" CDS complement(4475027..4475392) /locus_tag="TREES_T100005481" /codon_start=1 /product="Zinc finger HIT domain-containing protein 3" /protein_id="ELW61761.1" /db_xref="InterPro:IPR007529" /db_xref="UniProtKB/Swiss-Prot:Q15649" /translation="MGCGSAGPLREVMASLNCSSVVCVVCVVCLEKPTYCCLACRVPY CSVTCFRTHREQCNPGTRPVEKKIPAKTVKPVENQDDDDSIADFLNSDEEEDRVSLQN LKNLEDSATLRTLLLNPHL" assembly_gap 4480610..4481049 /estimated_length=440 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4481985..4482027 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4491864..>4492661 /locus_tag="TREES_T100005540" mRNA join(<4491864..4492124,4492416..>4492661) /locus_tag="TREES_T100005540" /product="Epidermal growth factor receptor kinase substrate 8" CDS join(4491864..4492124,4492416..4492661) /locus_tag="TREES_T100005540" /codon_start=1 /product="Epidermal growth factor receptor kinase substrate 8" /protein_id="ELW61762.1" /db_xref="UniProtKB/Swiss-Prot:Q12929" /translation="MSAKDYPQSTPVYPSTLQLMAAHSAPTQRALSRPGEAAAAFKPT PNCHVDRNYDPVKTRPKKYATSKFDFMARNSSELSVLKDDVLENSSSSDSAGSFVRDS QRHKPLPVDPRKSQMEEVQDELILRLTTGQSVAQRFHVPWQNVPLSISLTTPPDVKAR LQLKGFTL" assembly_gap 4500524..4500539 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4500544..>4510438 /locus_tag="TREES_T100005541" mRNA join(<4500544..4500805,4505427..4505483,4506255..4506410, 4507146..4507291,4507414..4507503,4508013..4508079, 4508198..4508361,4510250..>4510438) /locus_tag="TREES_T100005541" /product="Carbonic anhydrase 4" CDS join(4500544..4500805,4505427..4505483,4506255..4506410, 4507146..4507291,4507414..4507503,4508013..4508079, 4508198..4508361,4510250..4510438) /locus_tag="TREES_T100005541" /codon_start=1 /product="Carbonic anhydrase 4" /protein_id="ELW61763.1" /db_xref="InterPro:IPR001148" /db_xref="UniProtKB/Swiss-Prot:P22748" /translation="MTPPGGGAAIRVPLSGRPPILLRYITPARMSAAPLTARSVRDPG SADRLAPAHDAAAACAPGPRCGSAPGPPXXXXXXXXXXXVASAETHWCYEVQAKASSD SACLGPDQWGGSCQKDRQSPINIDTTKVKVDSSLISFSFSGYDKKHKWTIRNNGHSVM VMLGNTVTLSGGGLPARYQATQLHLHWSMVLDAGSEHSLNGERFAMEMHIVHQKDKET RKEEQNSGDEIAVLAFLVEEGSQVNNGFQPLVEALSAVPTPEMETTMRESSLWDLLPK EENLRHYFRYMGSLTTPNCDETVVWTVFQERIKLRKDQILAFSRNLYYDSERSLNMTD NVRPVQRIGQRTVFTSQASGQLLPWSLPALLVPTLICLMAGL" assembly_gap 4500761..4500790 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4507004..4507026 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4509148..4509865 /estimated_length=718 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4514251..>4523631) /locus_tag="TREES_T100005480" mRNA complement(join(<4514251..4514382,4523233..>4523631)) /locus_tag="TREES_T100005480" /product="26S protease regulatory subunit 4" CDS complement(join(4514251..4514382,4523233..4523631)) /locus_tag="TREES_T100005480" /codon_start=1 /product="26S protease regulatory subunit 4" /protein_id="ELW61764.1" /db_xref="UniProtKB/Swiss-Prot:P62193" /translation="MSVGTLEEVIDDSCAIVFTSVGSEHYVSILSFVDKDLLEPGCSV LPVGTRLLGPAQPQGACSDGVLRDDTDPLVTGMRVEKAPQETYADTGGLDNQIQESKE SVELPLTHPEYYEEMVIKPPRGSFSLVPLAQVHPAPGPGTPLPDVSALQFRSLERRPQ TGMFFSLNPQSLAQRK" assembly_gap 4526703..4526712 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4532434..>4742709) /locus_tag="TREES_T100005479" mRNA complement(join(<4532434..4532607,4534768..4534860, 4535334..4535758,4538658..4538796,4539988..4540179, 4548173..4548293,4549527..4549613,4557390..4557574, 4560474..4560968,4568725..4568936,4570381..4570492, 4573336..4573487,4574375..4574549,4575871..4576044, 4577793..4577898,4578153..4578291,4579366..4579440, 4580120..4580201,4583233..4583387,4587917..4588034, 4590401..4590541,4592084..4592259,4594650..4594842, 4612936..4613019,4618449..4618511,4619427..4619542, 4622627..4622734,4625286..4625417,4643151..4643310, 4645100..4645218,4742544..>4742709)) /locus_tag="TREES_T100005479" /product="Ubiquitin carboxyl-terminal hydrolase 32" CDS complement(join(4532434..4532607,4534768..4534860, 4535334..4535758,4538658..4538796,4539988..4540179, 4548173..4548293,4549527..4549613,4557390..4557574, 4560474..4560968,4568725..4568936,4570381..4570492, 4573336..4573487,4574375..4574549,4575871..4576044, 4577793..4577898,4578153..4578291,4579366..4579440, 4580120..4580201,4583233..4583387,4587917..4588034, 4590401..4590541,4592084..4592259,4594650..4594842, 4612936..4613019,4618449..4618511,4619427..4619542, 4622627..4622734,4625286..4625417,4643151..4643310, 4645100..4645218,4742544..4742709)) /locus_tag="TREES_T100005479" /note="GO_function: GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]" /codon_start=1 /product="Ubiquitin carboxyl-terminal hydrolase 32" /protein_id="ELW61765.1" /db_xref="InterPro:IPR000533" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR006615" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:Q8NFA0" /translation="MRGAGGGEAHRAGGGEHIEPRYRQFAPLTRHQMILGEVFSGTTW FWVPRRLWYDSDIFSLFSSESGSYVVREEMERMLHVVDGKVPDTLRKCFSEGEKVNYE KFRNWLLLNKDAFTFSRWLLSGGVYVTLTDDSDTPTFYQTLAGVTHLEESDIIDLEKR YWLLKAQSRTGRFDLETFGPLVSPPIRPSLSEGLFNAFDENRDNHIDFKEISCGLSAC CRGPLAERQKFCFKVFDVDRDGVLSRTELRDMVVALLEVWKDNRTDDIPELHTDVSDI VEDILNAHDTTKIGHLTLEDYQIWSVKNVLANEFLNLLFQDANPVVIEPSSVLNGGKY SFGTAVHPVEQGEDRIGGSLSYVTTTEEKFSDNISTASEASETAGNGILHSTTPGTDM CFARQHNSSDNNNQCLLGTNGNILLHFNPQKPGAIDNQPLVTQEPVKATSLTLEGGRL KRTPQLIHGKDYEMVPEPVWRALYHWYGANLALPRPVIKNSKTDIPELELFPRYLLFL RQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIKE EDMRLWLYNSENYLTLLDDEDHRLEYLKIQDEQHLVIEVRNKDMSWPEEMSFIANSSK IDRHKVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM KGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGL HEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKT CGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGSTPVRYGLRLNMDEKYTGLKKQL SDLCGLKSEQILLAEVHGSNIKNFPQDNQKVRLSVSGFLCAFEIPIPASPTSASSPIQ TDFSSSPSTNGMFTLTTNGDLPRPIFIPNGMPNTVVPCGIEKNLTNGMVNGHMPSLPD SPFTGYIIAVHRKMDSRTTSQALQKLREMEKMADENERGMKVIENQVMKGEEKMEIKE MHLKEAKHIVEKADCKYEEVTHKLVILEGEPERAEECAEVSELKCGDLEELKNVTNNM KSLETLFEKFSEKEDKYEEEIKLLSDRLKEAETLAEFTERTVAKLEKTVDDLEEKLAQ AKEENMRTELYFLSSQKNRPSLFGMPLIVPCTVHTRKKDLYDAVWIQVSRLASPLPPQ EASNHAQDCDDSMGYQYPFTLRVVQKDGNSCAWCPWYRFCRGCKIDCGEDRAFIGNAY VAVDWDPTALHLRYQTSQERVVDEHESVEQSRRAQAEPINLDSCLRAFTNEEELGENE MYYCSKCKTHCLATKKLDLWRLPPILGDDLTEPRGLAGEVKKADAQGSAGEEDMLLSK SPSSLSANIISSPKGSPSSSRKSGTSCPSSKNSSPNSSPRTLGRSKGRLRLPQIGSKN KLSSSKENLDASKENGVGQICELADALSRGRMLGGSQPELVTPQDHEVALANGFLYEY EACGNGYSNGHLGNHSEEDSTDDQREDTRIKPIYNLYAISCHSGILGGGHYVTYAKNP NCKWYCYNDSSCKELHPDEIDTDSAYILFYEQQGIDYAQFLPKIDGKKMADTSSMDED FESDYKKYCVLQ" assembly_gap 4545736..4545811 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4551657..4551716 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4552347..4552441 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4554520..4554588 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4559422..4559444 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4566362..4566373 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4586864..4587192 /estimated_length=329 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4588972..4589002 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4595031..4595357 /estimated_length=327 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4624201..4624231 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4630745..4631806 /estimated_length=1062 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4641852..4641882 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4657697..4657712 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4659566..4659761 /estimated_length=196 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4660409..4660679 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4678544..4679268 /estimated_length=725 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4680574..4680628 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4682844..4682996 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4692685..4692784 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4717766..4718006 /estimated_length=241 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4730105..4730135 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4736601..4736697 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4740407..4740419 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4747453..>4758459 /locus_tag="TREES_T100005543" mRNA join(<4747453..4747830,4751334..4751435,4751718..4751893, 4753446..4753545,4758244..>4758459) /locus_tag="TREES_T100005543" /product="hypothetical protein" CDS join(4747453..4747830,4751334..4751435,4751718..4751893, 4753446..4753545,4758244..4758459) /locus_tag="TREES_T100005543" /codon_start=1 /product="hypothetical protein" /protein_id="ELW61766.1" /db_xref="UniProtKB/Swiss-Prot:Q32KP7" /translation="MARGAQTDPPAGPVSSARWRRVVRPCGREDRGGTGSNWVGRTGL QAQSTQMKVQEVEFSFLGKKLWFKLINYGCNGLPAPVTGERLCRVAKGEAARLGSATS EGLRARRTDETPRPCQPRFLRWPRVTNVLYLERSSSTIPAGDSLVRHAKGLDQDTFKI CKEYLRPLKKFLRKLCPPRDLPQRKKLKYMKQSLVVLGDHINTFLQHYCRAWEIKHWR KMLWRFVSLFSELEPKQLRRLYKYSKNNQTAKFLVAFCPLDASERSLLADQEDSLPKL CSAWGLHGNISGMKERLSRMQAPGRETSLLGEPWPQGHDGRGNRCLV" assembly_gap 4750909..4751161 /estimated_length=253 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4754370..4754386 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4757718..4757747 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4764144..4764371 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4776313..>4870310) /locus_tag="TREES_T100005478" mRNA complement(join(<4776313..4776566,4782266..4782431, 4783693..4783883,4785582..4785667,4789602..4789726, 4790988..4791093,4798183..4798307,4799582..4799687, 4799766..4799833,4809382..4809550,4817837..4817960, 4828866..4829017,4837945..4838033,4867983..4868282, 4870305..>4870310)) /locus_tag="TREES_T100005478" /product="Amyloid protein-binding protein 2" CDS complement(join(4776313..4776566,4782266..4782431, 4783693..4783883,4785582..4785667,4789602..4789726, 4790988..4791093,4798183..4798307,4799582..4799687, 4799766..4799833,4809382..4809550,4817837..4817960, 4828866..4829017,4837945..4838033,4867983..4868282, 4870305..4870310)) /locus_tag="TREES_T100005478" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Amyloid protein-binding protein 2" /protein_id="ELW61767.1" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:Q92624" /translation="MHPVPGGARALCPSVVCPRGCRRPSESSGAAEEFATEGGGGLRE EEAEEAEEEGRKMAAVELEWIPETLYNTAISAVVDNYIRSRRDIRSLPENIQFDVYYK LYQQGRLCQLGSEFCELEVFAKVLRALDKRHLLHHCFQALMDHGVKVASVLAYSFSRR CSYIAESDAAVKEKAIQVGFVLGGFLSDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRA VECCVRLLHVRNGNCKYHLGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKS HYDEACVVKREFKKAEQLIKHAVYLARDHFGSKHPKYSDTLLDYGFYLLNVDNICQSV AIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALDHFGSKHPKYSD TLLDYGFYLLNVDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSS GKFDNALFHAERAIGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQE AHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLL GQEDYEVALSVGHLASLYNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLI KLYNSIGNYEKVFEYHNVLSNWNRLRDRQYSVTDALEDVNTSPQSTEEVVQSFLISQN AEGPSC" assembly_gap 4777028..4777144 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4789978..4790004 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4798559..4798575 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4820044..4820519 /estimated_length=476 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4825503..4825727 /estimated_length=225 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4826557..4827848 /estimated_length=1292 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4829536..4829566 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4830932..4830942 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4855600..4855667 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4907405..4907433 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4917260..4917349 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4935301..4935688 /estimated_length=388 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4940108..4940268 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4946299..4946529 /estimated_length=231 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4946962..4947028 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4947825..4947900 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4950904..4956177 /estimated_length=5274 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4957665..4957697 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4971366..4971523 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4990980..4991222 /estimated_length=243 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4994707..4994908 /estimated_length=202 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4997631..4997851 /estimated_length=221 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5002249..5002335 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5008189..5008206 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5021251..>5354501 /locus_tag="TREES_T100005545" mRNA join(<5021251..5021333,5027434..5027488,5033282..5033357, 5041455..5041561,5068285..5068366,5092979..5093051, 5142396..5142503,5148299..5148375,5160506..5160582, 5165544..5165627,5172962..5173132,5179952..5180045, 5213144..5213277,5245721..5245985,5277451..5277601, 5299060..5299184,5302428..5302593,5304533..5304633, 5341821..5341921,5347003..5347199,5354237..>5354501) /locus_tag="TREES_T100005545" /product="Breast carcinoma-amplified sequence 3" CDS join(5021251..5021333,5027434..5027488,5033282..5033357, 5041455..5041561,5068285..5068366,5092979..5093051, 5142396..5142503,5148299..5148375,5160506..5160582, 5165544..5165627,5172962..5173132,5179952..5180045, 5213144..5213277,5245721..5245985,5277451..5277601, 5299060..5299184,5302428..5302593,5304533..5304633, 5341821..5341921,5347003..5347199,5354237..5354501) /locus_tag="TREES_T100005545" /codon_start=1 /product="Breast carcinoma-amplified sequence 3" /protein_id="ELW61768.1" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR022175" /db_xref="UniProtKB/Swiss-Prot:Q9H6U6" /translation="MNEAMATDSPRRPSRCTGGAVVRPQAVTEQSYMESVVTFLQDVV PQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQ VWSIPISGEAQELFSVRHGPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGT SPPYCCVDLYSLRTGEMVKSIQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFF VTSCYPCPGPNMNPIALGSRWLAYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTL KSGLTMVGKVVTQLTGTLPSGVTEDDIAIHSNSRRSPLVPGIITVIDTETVGEGQVLV SEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQSA VHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTHMSPR VVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSPSGSPLHGKLNSQDSYNNFT NNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGTITKRTGKVKPPPQISPSKSMGGEFCV AAIFGTSRSWFPNNAGLKREKDQSKQVVVESLYIISCYGTLVEHTMEPRPLSTSPKIS DDTPLEMVTSPRASWTLVRTPQWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGS PGPITRHGSYDSLASDHSGQEDEEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQT TVISSSSSVLQSHGPSDTPQPLLDFDTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRR GVSTVIDAASGRKSSPKYYLLENSVHFKFIFSHNVEDDIYLSFFLCLFIFGYVCGLIQ YGAYICC" assembly_gap 5056975..5057460 /estimated_length=486 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5064427..5064447 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5072420..5072461 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5127575..5127910 /estimated_length=336 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5167503..5167533 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5197203..5197250 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5204719..5205119 /estimated_length=401 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5209575..5209740 /estimated_length=166 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5215244..5215852 /estimated_length=609 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5222385..5223578 /estimated_length=1194 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5243558..5243572 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5244044..5244781 /estimated_length=738 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5250552..5253193 /estimated_length=2642 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5284762..5284792 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5299982..5300020 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5301992..5302022 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5308902..5309083 /estimated_length=182 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5322816..5322955 /estimated_length=140 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5323669..5325847 /estimated_length=2179 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5326941..5327237 /estimated_length=297 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5336712..5337016 /estimated_length=305 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5339196..5339410 /estimated_length=215 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5352876..5352997 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5370017..5370032 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5408235..5408265 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5470582..5470786 /estimated_length=205 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5487274..5487427 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5526222..5526270 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5529129..5529224 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5538442..5538573 /estimated_length=132 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5555788..5556504 /estimated_length=717 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5633873..5633903 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(ALAR01084780.1:1..67413,gap(275),ALAR01084781.1:1..33345, gap(31),ALAR01084782.1:1..36463,gap(244),ALAR01084783.1:1..4475, gap(31),ALAR01084784.1:1..25229,gap(42),ALAR01084785.1:1..656, gap(686),ALAR01084786.1:1..1098,gap(639),ALAR01084787.1:1..34353, gap(17),ALAR01084788.1:1..10622,gap(717),ALAR01084789.1:1..26941, gap(31),ALAR01084790.1:1..1493,gap(31),ALAR01084791.1:1..4990, gap(1166),ALAR01084792.1:1..1046,gap(133),ALAR01084793.1:1..36364, gap(10),ALAR01084794.1:1..2090,gap(335),ALAR01084795.1:1..1174, gap(270),ALAR01084796.1:1..13654,gap(546),ALAR01084797.1:1..33272, gap(220),ALAR01084798.1:1..11844,gap(31),ALAR01084799.1:1..7419, gap(377),ALAR01084800.1:1..10173,gap(11),ALAR01084801.1:1..20039, gap(31),ALAR01084802.1:1..13605,gap(210),ALAR01084803.1:1..10251, gap(132),ALAR01084804.1:1..36494,gap(221),ALAR01084805.1:1..5365, gap(108),ALAR01084806.1:1..7681,gap(172),ALAR01084807.1:1..16164, gap(360),ALAR01084808.1:1..1196,gap(31),ALAR01084809.1:1..5546, gap(178),ALAR01084810.1:1..9936,gap(18),ALAR01084811.1:1..18409, gap(169),ALAR01084812.1:1..9965,gap(80),ALAR01084813.1:1..4765, gap(1903),ALAR01084814.1:1..17660,gap(148),ALAR01084815.1:1..17986, gap(31),ALAR01084816.1:1..7784,gap(358),ALAR01084817.1:1..9865, gap(17),ALAR01084818.1:1..3602,gap(31),ALAR01084819.1:1..849, gap(37),ALAR01084820.1:1..3436,gap(47),ALAR01084821.1:1..17428, gap(31),ALAR01084822.1:1..11955,gap(187),ALAR01084823.1:1..20802, gap(13),ALAR01084824.1:1..35818,gap(830),ALAR01084825.1:1..4078, gap(115),ALAR01084826.1:1..1535,gap(516),ALAR01084827.1:1..22644, gap(12),ALAR01084828.1:1..15285,gap(519),ALAR01084829.1:1..8072, gap(315),ALAR01084830.1:1..31818,gap(948),ALAR01084831.1:1..5100, gap(105),ALAR01084832.1:1..381,gap(244),ALAR01084833.1:1..15064, gap(77),ALAR01084834.1:1..9384,gap(898),ALAR01084835.1:1..5908, gap(173),ALAR01084836.1:1..1014,gap(453),ALAR01084837.1:1..20888, gap(31),ALAR01084838.1:1..18038,gap(47),ALAR01084839.1:1..4740, gap(11),ALAR01084840.1:1..6289,gap(435),ALAR01084841.1:1..29947, gap(397),ALAR01084842.1:1..3136,gap(45),ALAR01084843.1:1..9030, gap(501),ALAR01084844.1:1..6611,gap(572),ALAR01084845.1:1..19420, gap(31),ALAR01084846.1:1..5752,gap(188),ALAR01084847.1:1..44543, gap(31),ALAR01084848.1:1..52792,gap(31),ALAR01084849.1:1..8903, gap(144),ALAR01084850.1:1..1763,gap(41),ALAR01084851.1:1..8731, gap(31),ALAR01084852.1:1..30680,gap(204),ALAR01084853.1:1..2177, gap(483),ALAR01084854.1:1..12649,gap(31),ALAR01084855.1:1..22929, gap(57),ALAR01084856.1:1..11212,gap(683),ALAR01084857.1:1..11078, gap(31),ALAR01084858.1:1..1974,gap(52),ALAR01084859.1:1..13029, gap(31),ALAR01084860.1:1..4195,gap(31),ALAR01084861.1:1..6632, gap(13),ALAR01084862.1:1..24268,gap(25),ALAR01084863.1:1..37960, gap(31),ALAR01084864.1:1..4080,gap(466),ALAR01084865.1:1..8655, gap(31),ALAR01084866.1:1..3207,gap(218),ALAR01084867.1:1..17506, gap(31),ALAR01084868.1:1..3902,gap(568),ALAR01084869.1:1..27771, gap(247),ALAR01084870.1:1..5405,gap(28),ALAR01084871.1:1..349, gap(26),ALAR01084872.1:1..5489,gap(11),ALAR01084873.1:1..6961, gap(13),ALAR01084874.1:1..14621,gap(31),ALAR01084875.1:1..3319, gap(724),ALAR01084876.1:1..972,gap(712),ALAR01084877.1:1..4784, gap(179),ALAR01084878.1:1..458,gap(337),ALAR01084879.1:1..6010, gap(488),ALAR01084880.1:1..1368,gap(37),ALAR01084881.1:1..278, gap(137),ALAR01084882.1:1..5171,gap(521),ALAR01084883.1:1..55127, gap(2319),ALAR01084884.1:1..512,gap(18),ALAR01084885.1:1..8093, gap(77),ALAR01084886.1:1..45284,gap(31),ALAR01084887.1:1..12178, gap(31),ALAR01084888.1:1..17205,gap(20),ALAR01084889.1:1..2150, gap(382),ALAR01084890.1:1..9512,gap(70),ALAR01084891.1:1..22824, gap(744),ALAR01084892.1:1..2565,gap(31),ALAR01084893.1:1..5826, gap(154),ALAR01084894.1:1..14012,gap(356),ALAR01084895.1:1..17348, gap(521),ALAR01084896.1:1..4890,gap(21),ALAR01084897.1:1..4530, gap(445),ALAR01084898.1:1..11085,gap(370),ALAR01084899.1:1..4870, gap(63),ALAR01084900.1:1..3891,gap(156),ALAR01084901.1:1..2147, gap(92),ALAR01084902.1:1..23026,gap(2162),ALAR01084903.1:1..8670, gap(185),ALAR01084904.1:1..5106,gap(55),ALAR01084905.1:1..23378, gap(140),ALAR01084906.1:1..1025,gap(16),ALAR01084907.1:1..10900, gap(18),ALAR01084908.1:1..9557,gap(431),ALAR01084909.1:1..6247, gap(1990),ALAR01084910.1:1..634,gap(27),ALAR01084911.1:1..8042, gap(31),ALAR01084912.1:1..5420,gap(18),ALAR01084913.1:1..12589, gap(16),ALAR01084914.1:1..5502,gap(70),ALAR01084915.1:1..3195, gap(12411),ALAR01084916.1:1..14605,gap(31),ALAR01084917.1:1..4376, gap(186),ALAR01084918.1:1..6066,gap(16),ALAR01084919.1:1..26526, gap(81),ALAR01084920.1:1..10867,gap(10),ALAR01084921.1:1..1735, gap(996),ALAR01084922.1:1..288,gap(443),ALAR01084923.1:1..7415, gap(31),ALAR01084924.1:1..63333,gap(63),ALAR01084925.1:1..12807, gap(103),ALAR01084926.1:1..28686,gap(302),ALAR01084927.1:1..12977, gap(1435),ALAR01084928.1:1..3736,gap(31),ALAR01084929.1:1..9492, gap(603),ALAR01084930.1:1..4455,gap(18),ALAR01084931.1:1..7632, gap(143),ALAR01084932.1:1..20636,gap(10),ALAR01084933.1:1..30183, gap(31),ALAR01084934.1:1..10505,gap(245),ALAR01084935.1:1..23090, gap(1995),ALAR01084936.1:1..10148,gap(5182), ALAR01084937.1:1..14317,gap(307),ALAR01084938.1:1..788,gap(242), ALAR01084939.1:1..1625,gap(328),ALAR01084940.1:1..3348,gap(10), ALAR01084941.1:1..13524,gap(21),ALAR01084942.1:1..1938,gap(31), ALAR01084943.1:1..5695,gap(1342),ALAR01084944.1:1..8752,gap(16), ALAR01084945.1:1..15685,gap(132),ALAR01084946.1:1..15793,gap(17), ALAR01084947.1:1..11065,gap(1158),ALAR01084948.1:1..3141,gap(1015), ALAR01084949.1:1..942,gap(976),ALAR01084950.1:1..10750,gap(1656), ALAR01084951.1:1..41626,gap(31),ALAR01084952.1:1..35679,gap(1145), ALAR01084953.1:1..34939,gap(360),ALAR01084954.1:1..1164,gap(28), ALAR01084955.1:1..5074,gap(58),ALAR01084956.1:1..9211,gap(144), ALAR01084957.1:1..46625,gap(29),ALAR01084958.1:1..3566,gap(803), ALAR01084959.1:1..3660,gap(77),ALAR01084960.1:1..2420,gap(80), ALAR01084961.1:1..14850,gap(303),ALAR01084962.1:1..3572,gap(90), ALAR01084963.1:1..23910,gap(342),ALAR01084964.1:1..29233,gap(71), ALAR01084965.1:1..6788,gap(1221),ALAR01084966.1:1..25888,gap(54), ALAR01084967.1:1..431,gap(30),ALAR01084968.1:1..18856,gap(290), ALAR01084969.1:1..17135,gap(31),ALAR01084970.1:1..28609,gap(376), ALAR01084971.1:1..4846,gap(24),ALAR01084972.1:1..9096,gap(1294), ALAR01084973.1:1..14884,gap(15),ALAR01084974.1:1..54242,gap(155), ALAR01084975.1:1..27563,gap(714),ALAR01084976.1:1..7330,gap(126), ALAR01084977.1:1..1219,gap(17773),ALAR01084978.1:1..9611,gap(1485), ALAR01084979.1:1..2766,gap(10),ALAR01084980.1:1..6734,gap(87), ALAR01084981.1:1..14475,gap(27),ALAR01084982.1:1..10274,gap(392), ALAR01084983.1:1..22572,gap(70),ALAR01084984.1:1..9055,gap(22), ALAR01084985.1:1..26033,gap(31),ALAR01084986.1:1..22389,gap(934), ALAR01084987.1:1..19933,gap(40),ALAR01084988.1:1..13936,gap(507), ALAR01084989.1:1..1983,gap(79),ALAR01084990.1:1..19100,gap(113), ALAR01084991.1:1..24446,gap(31),ALAR01084992.1:1..1110,gap(177), ALAR01084993.1:1..1239,gap(20),ALAR01084994.1:1..32473,gap(104), ALAR01084995.1:1..21605,gap(401),ALAR01084996.1:1..6197,gap(16), ALAR01084997.1:1..834,gap(139),ALAR01084998.1:1..2252,gap(214), ALAR01084999.1:1..5301,gap(263),ALAR01085000.1:1..7972,gap(31), ALAR01085001.1:1..1354,gap(434),ALAR01085002.1:1..14972,gap(23), ALAR01085003.1:1..5652,gap(669),ALAR01085004.1:1..38534,gap(580), ALAR01085005.1:1..1250,gap(876),ALAR01085006.1:1..22344,gap(422), ALAR01085007.1:1..13457,gap(509),ALAR01085008.1:1..8049,gap(144), ALAR01085009.1:1..11404,gap(351),ALAR01085010.1:1..3092,gap(31), ALAR01085011.1:1..10671,gap(31),ALAR01085012.1:1..20058,gap(33), ALAR01085013.1:1..566,gap(31),ALAR01085014.1:1..5626,gap(22), ALAR01085015.1:1..6928,gap(136),ALAR01085016.1:1..3793,gap(962), ALAR01085017.1:1..10500,gap(119),ALAR01085018.1:1..24535,gap(77), ALAR01085019.1:1..19690,gap(120),ALAR01085020.1:1..8705,gap(646), ALAR01085021.1:1..51294,gap(6349),ALAR01085022.1:1..36559,gap(181), ALAR01085023.1:1..5671,gap(93),ALAR01085024.1:1..27064,gap(31), ALAR01085025.1:1..9453,gap(245),ALAR01085026.1:1..5951,gap(31), ALAR01085027.1:1..1740,gap(745),ALAR01085028.1:1..5711,gap(2207), ALAR01085029.1:1..22324,gap(76),ALAR01085030.1:1..26774,gap(57), ALAR01085031.1:1..26175,gap(27),ALAR01085032.1:1..32841,gap(327), ALAR01085033.1:1..18491,gap(20),ALAR01085034.1:1..4745,gap(347), ALAR01085035.1:1..5491,gap(103),ALAR01085036.1:1..2550,gap(584), ALAR01085037.1:1..30117,gap(57),ALAR01085038.1:1..41763,gap(31), ALAR01085039.1:1..122935,gap(31),ALAR01085040.1:1..20434,gap(153), ALAR01085041.1:1..31152,gap(350),ALAR01085042.1:1..2516,gap(213), ALAR01085043.1:1..27423,gap(23),ALAR01085044.1:1..7826,gap(14), ALAR01085045.1:1..2455,gap(65),ALAR01085046.1:1..4866,gap(1045), ALAR01085047.1:1..8730,gap(309),ALAR01085048.1:1..200,gap(32), ALAR01085049.1:1..22090,gap(105),ALAR01085050.1:1..85759,gap(103), ALAR01085051.1:1..7736,gap(3814),ALAR01085052.1:1..47619,gap(4360), ALAR01085053.1:1..3985,gap(94),ALAR01085054.1:1..52753,gap(36), ALAR01085055.1:1..8726,gap(31),ALAR01085056.1:1..26675,gap(85), ALAR01085057.1:1..27264,gap(47),ALAR01085058.1:1..412,gap(195), ALAR01085059.1:1..7610,gap(284),ALAR01085060.1:1..59952,gap(31), ALAR01085061.1:1..892,gap(365),ALAR01085062.1:1..4888,gap(418), ALAR01085063.1:1..3529,gap(89),ALAR01085064.1:1..11703,gap(14), ALAR01085065.1:1..16504,gap(137),ALAR01085066.1:1..43133,gap(44), ALAR01085067.1:1..1079,gap(130),ALAR01085068.1:1..6320,gap(60), ALAR01085069.1:1..30588,gap(8681),ALAR01085070.1:1..20063,gap(974), ALAR01085071.1:1..3901,gap(16),ALAR01085072.1:1..579,gap(189), ALAR01085073.1:1..5710,gap(309),ALAR01085074.1:1..16718,gap(20), ALAR01085075.1:1..7440,gap(14),ALAR01085076.1:1..457,gap(343), ALAR01085077.1:1..7336,gap(427),ALAR01085078.1:1..14744,gap(16), ALAR01085079.1:1..10052,gap(144),ALAR01085080.1:1..12868, gap(18148),ALAR01085081.1:1..7199,gap(689),ALAR01085082.1:1..15010, gap(391),ALAR01085083.1:1..17571,gap(98),ALAR01085084.1:1..10708, gap(263),ALAR01085085.1:1..17734,gap(440),ALAR01085086.1:1..935, gap(43),ALAR01085087.1:1..18496,gap(16),ALAR01085088.1:1..221, gap(30),ALAR01085089.1:1..6213,gap(23),ALAR01085090.1:1..2121, gap(718),ALAR01085091.1:1..16837,gap(10),ALAR01085092.1:1..19023, gap(76),ALAR01085093.1:1..5845,gap(60),ALAR01085094.1:1..630, gap(95),ALAR01085095.1:1..2078,gap(69),ALAR01085096.1:1..4833, gap(23),ALAR01085097.1:1..6917,gap(12),ALAR01085098.1:1..20490, gap(329),ALAR01085099.1:1..1779,gap(31),ALAR01085100.1:1..6028, gap(327),ALAR01085101.1:1..28843,gap(31),ALAR01085102.1:1..6513, gap(1062),ALAR01085103.1:1..10045,gap(31),ALAR01085104.1:1..15814, gap(16),ALAR01085105.1:1..1853,gap(196),ALAR01085106.1:1..647, gap(271),ALAR01085107.1:1..17864,gap(725),ALAR01085108.1:1..1305, gap(55),ALAR01085109.1:1..2215,gap(153),ALAR01085110.1:1..9688, gap(100),ALAR01085111.1:1..24981,gap(241),ALAR01085112.1:1..12098, gap(31),ALAR01085113.1:1..6465,gap(97),ALAR01085114.1:1..3709, gap(13),ALAR01085115.1:1..10489,gap(253),ALAR01085116.1:1..3208, gap(17),ALAR01085117.1:1..3331,gap(30),ALAR01085118.1:1..6396, gap(228),ALAR01085119.1:1..12656,gap(117),ALAR01085120.1:1..12833, gap(27),ALAR01085121.1:1..8554,gap(17),ALAR01085122.1:1..21468, gap(476),ALAR01085123.1:1..4983,gap(225),ALAR01085124.1:1..829, gap(1292),ALAR01085125.1:1..1687,gap(31),ALAR01085126.1:1..1365, gap(11),ALAR01085127.1:1..24657,gap(68),ALAR01085128.1:1..51737, gap(29),ALAR01085129.1:1..9826,gap(90),ALAR01085130.1:1..17951, gap(388),ALAR01085131.1:1..4419,gap(161),ALAR01085132.1:1..6030, gap(231),ALAR01085133.1:1..432,gap(67),ALAR01085134.1:1..796, gap(76),ALAR01085135.1:1..3003,gap(5274),ALAR01085136.1:1..1487, gap(33),ALAR01085137.1:1..13668,gap(158),ALAR01085138.1:1..19456, gap(243),ALAR01085139.1:1..3484,gap(202),ALAR01085140.1:1..2722, gap(221),ALAR01085141.1:1..4397,gap(87),ALAR01085142.1:1..5853, gap(18),ALAR01085143.1:1..48768,gap(486),ALAR01085144.1:1..6966, gap(21),ALAR01085145.1:1..7972,gap(42),ALAR01085146.1:1..55113, gap(336),ALAR01085147.1:1..39592,gap(31),ALAR01085148.1:1..29669, gap(48),ALAR01085149.1:1..7468,gap(401),ALAR01085150.1:1..4455, gap(166),ALAR01085151.1:1..5503,gap(609),ALAR01085152.1:1..6532, gap(1194),ALAR01085153.1:1..19979,gap(15),ALAR01085154.1:1..471, gap(738),ALAR01085155.1:1..5770,gap(2642),ALAR01085156.1:1..31568, gap(31),ALAR01085157.1:1..15189,gap(39),ALAR01085158.1:1..1971, gap(31),ALAR01085159.1:1..6879,gap(182),ALAR01085160.1:1..13732, gap(140),ALAR01085161.1:1..713,gap(2179),ALAR01085162.1:1..1093, gap(297),ALAR01085163.1:1..9474,gap(305),ALAR01085164.1:1..2179, gap(215),ALAR01085165.1:1..13465,gap(122),ALAR01085166.1:1..17019, gap(16),ALAR01085167.1:1..38202,gap(31),ALAR01085168.1:1..62316, gap(205),ALAR01085169.1:1..16487,gap(154),ALAR01085170.1:1..38794, gap(49),ALAR01085171.1:1..2858,gap(96),ALAR01085172.1:1..9217, gap(132),ALAR01085173.1:1..17214,gap(717),ALAR01085174.1:1..77368, gap(31),ALAR01085175.1:1..3424) //