LOCUS       KB299519              284450 bp    DNA     linear   CON 19-MAR-2015
DEFINITION  Capitella teleta unplaced genomic scaffold CAPTEscaffold_238, whole
            genome shotgun sequence.
ACCESSION   KB299519 AMQN01000000
VERSION     KB299519.1
DBLINK      BioProject: PRJNA175705
            BioSample: SAMN02769627
KEYWORDS    WGS.
SOURCE      Capitella teleta
  ORGANISM  Capitella teleta
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta;
            Sedentaria; Scolecida; Capitellidae; Capitella.
REFERENCE   1  (bases 1 to 284450)
  AUTHORS   Simakov,O., Marletaz,F., Cho,S.J., Edsinger-Gonzales,E., Havlak,P.,
            Hellsten,U., Kuo,D.H., Larsson,T., Lv,J., Arendt,D., Savage,R.,
            Osoegawa,K., de Jong,P., Grimwood,J., Chapman,J.A., Shapiro,H.,
            Aerts,A., Otillar,R.P., Terry,A.Y., Boore,J.L., Grigoriev,I.V.,
            Lindberg,D.R., Seaver,E.C., Weisblat,D.A., Putnam,N.H. and
            Rokhsar,D.S.
  TITLE     Insights into bilaterian evolution from three spiralian genomes
  JOURNAL   Nature 493 (7433), 526-531 (2013)
   PUBMED   23254933
REFERENCE   2  (bases 1 to 284450)
  AUTHORS   Hellsten,U., Grimwood,J., Chapman,J.A., Shapiro,H., Aerts,A.,
            Otillar,R.P., Terry,A.Y., Boore,J.L., Simakov,O., Marletaz,F.,
            Cho,S.-J., Edsinger-Gonzales,E., Havlak,P., Kuo,D.-H., Larsson,T.,
            Lv,J., Arendt,D., Savage,R., Osoegawa,K., de Jong,P.,
            Lindberg,D.R., Seaver,E.C., Weisblat,D.A., Putnam,N.H.,
            Grigoriev,I.V. and Rokhsar,D.S.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2012) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://genome.jgi.doe.gov/Capca1
            JGI Project ID: 16637
            The DNA was provided by Daniel Rokshar(dsrokhsar@lbl.gov)
            The strain is available from Daniel Rokshar
            Contacts: Daniel Rokshar (dsrokhsar@lbl.gov)
            Igor Grigoriev (ivgrigoriev@lbl.gov)
            Assembly and annotation done by JGI.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: JGI Jazz Assembler v. 10/16/2006
            Assembly Name         :: Capca1
            Genome Coverage       :: 7.9x
            Sequencing Technology :: Sanger
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..284450
                     /organism="Capitella teleta"
                     /mol_type="genomic DNA"
                     /submitter_seqid="CAPTEscaffold_238"
                     /strain="I ESC-2004"
                     /db_xref="taxon:283909"
                     /chromosome="Unknown"
     gene            <5374..7555
                     /locus_tag="CAPTEDRAFT_226607"
     mRNA            join(<5374..5563,6193..6336,6387..7142,7276..7555)
                     /locus_tag="CAPTEDRAFT_226607"
                     /product="hypothetical protein"
     CDS             join(5374..5563,6193..6336,6387..7142,7276..7436)
                     /locus_tag="CAPTEDRAFT_226607"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07894.1"
                     /db_xref="JGIDB:Capca1_226607"
                     /translation="METKRYSAYSFVLILAMFVLFALSSGIAYSFGLYHLIFLEVFQK
                     GSTITAWISSINMGMQGFVAPVASLLSDRIGLKWTAMVGGFLSFVGLLVTAFAPNIHV
                     VFFSIGILTGIGFGIVYTMGTVVIALHFDRWRPIALAIAQSGLNVGSFVYPIFGEWIL
                     GVYGWRGTMLVTSALTLNMVAAGAVIREKLPTQAEKSADDAESKPTQSGRRQMWTNWK
                     YWLCHVLCFFMYFALISFTTHIASYAQYLGHSDSNTVMLISIQALSGFICRNGLSFVA
                     SLQRTDIYWLLFVTTLVPGLCHFMVTFSDSFVMLCVSTMLHSIIYGTIGPVFIEVICL
                     ILGAEDFALGYGCLEVSMAVGALLGPPASGFAYEGSGSYETSFYVTGTSLIIAAFCTI
                     PLALNRNTQSTVISESETKEVNNV"
     gene            complement(<12073..>15224)
                     /locus_tag="CAPTEDRAFT_209863"
     mRNA            complement(join(<12073..12245,12336..13070,13762..13905,
                     15008..>15224))
                     /locus_tag="CAPTEDRAFT_209863"
                     /product="hypothetical protein"
     CDS             complement(join(12073..12245,12336..13070,13762..13905,
                     15008..15224))
                     /locus_tag="CAPTEDRAFT_209863"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07895.1"
                     /db_xref="JGIDB:Capca1_209863"
                     /translation="MAKDPRRKRAACSREDAYSVVLVLAVIVLTVLSCGISFSFGLFQ
                     MIFLEVFQKSSTLTSSISAVNFAVQGFIAPVSSFLAERIGIRWTTIIGALLSFCGLFA
                     TTFAPNIYVAFITLGIITGMGFGIIFSMGTVAIALHFDRFRPVAFAVSQSGIHIGSFV
                     YPFLGEWLLEGYGWRGTMLITSALSLNMLAAAMLIRDIMPAHQDPAERAASRSEIWTN
                     WKYWLGHVHCFFMFFGVISFMTHFSPYAEWLGYSARKSVALMAIHGLSGLASRWIVSL
                     IMSLHIINIFWLLFLTTIIPAFSQILLTFEVHYGILCAIAVLHSLVNSAIGPVFMEVA
                     CQIIGMQNFAIGYGFLLASLAAGALVGPPLAGLAYDLTGTYQCAFYVSGGSLIVSSVC
                     VIPLVFKRGSKASIDSKLVMDELDIDDLKV"
     assembly_gap    16275..16477
                     /estimated_length=203
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<17486..>19350)
                     /locus_tag="CAPTEDRAFT_209864"
     mRNA            complement(join(<17486..17600,18089..18245,18937..19080,
                     19326..>19350))
                     /locus_tag="CAPTEDRAFT_209864"
                     /product="hypothetical protein"
     CDS             complement(join(17486..17600,18089..18245,18937..19080,
                     19326..19350))
                     /locus_tag="CAPTEDRAFT_209864"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07896.1"
                     /db_xref="JGIDB:Capca1_209864"
                     /translation="MTDCESANPPVSSFLAERIGIRWTTIIGALLSFCGLFATTFAPN
                     IYVAFITLGIITGMGFGIIFSMGTVAIALHFDRFRPVAFAVSQSGIHIGSFVYPFLGE
                     WLLEGYGYEDGLYNTHTFDIARKELFSRVARCHGNTTIRSLDYH"
     assembly_gap    17901..17950
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    20442..20491
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<31066..>31653)
                     /locus_tag="CAPTEDRAFT_209865"
     mRNA            complement(<31066..>31653)
                     /locus_tag="CAPTEDRAFT_209865"
                     /product="hypothetical protein"
     CDS             complement(31066..31653)
                     /locus_tag="CAPTEDRAFT_209865"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07897.1"
                     /db_xref="JGIDB:Capca1_209865"
                     /translation="MLLDLLALRALILLDLLLDFLALEALLLLDLLLDLLALEALLLL
                     DLLLDLLALEALLLLDLLLDLLVLCALLLLDLLALCALLLLDMLLDLLALRALILLDL
                     LLDFLALEALLLLDLLLDLLALCALLLLDLLALCALLLLDLLALCALLLLDLLALCAL
                     LLLDLLALCALLLLDMLLDLLALCALLLLDLLLDF"
     assembly_gap    31667..33948
                     /estimated_length=2282
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<35073..>37437)
                     /locus_tag="CAPTEDRAFT_132286"
     mRNA            complement(join(<35073..35252,35306..35410,35471..35522,
                     37382..>37437))
                     /locus_tag="CAPTEDRAFT_132286"
                     /product="hypothetical protein"
     CDS             complement(join(35073..35252,35306..35410,35471..35522,
                     37382..>37437))
                     /locus_tag="CAPTEDRAFT_132286"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07898.1"
                     /db_xref="JGIDB:Capca1_132286"
                     /translation="VLQDLPSLGSQVARKAPASYTKIVVKGMTKAEMILKVVMSPHEP
                     PQVFVDNYIKLLTESDLHEFQRILEMKSLRRNDQVMMTDLYRSRNPTAAAGPAGGGGE
                     RGQINPFTSEHVEHSRIKKLEKLIKKRL"
     assembly_gap    37534..37583
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(38168..>45067)
                     /locus_tag="CAPTEDRAFT_226608"
     mRNA            complement(join(38168..38386,38440..38544,38605..38656,
                     40331..40416,40462..40531,40584..40732,40785..40863,
                     40919..41158,41245..41487,41541..41635,41689..41817,
                     41873..42011,42450..42592,42641..42784,43590..43668,
                     43723..43842,43893..44008,44060..44344,44975..>45067))
                     /locus_tag="CAPTEDRAFT_226608"
                     /product="hypothetical protein"
     CDS             complement(join(38207..38386,38440..38544,38605..38656,
                     40331..40416,40462..40531,40584..40732,40785..40863,
                     40919..41158,41245..41487,41541..41635,41689..41817,
                     41873..42011,42450..42592,42641..42784,43590..43668,
                     43723..43842,43893..44008,44060..44344,44975..45067))
                     /locus_tag="CAPTEDRAFT_226608"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07899.1"
                     /db_xref="InterPro:IPR007234"
                     /db_xref="JGIDB:Capca1_226608"
                     /translation="MADVEDEDVIEDDHFGAVLNFPSEVQEAIDQVIPSNDPLDRPDF
                     NAVDYINTLFPTEQSLVNIDDVVNRIRLKVRRLDEDIRTVVRGQTNVGQEGKTALEDA
                     QAAILELFTKIKDIKDKAEKSEEMVKEITRDIKTLDHAKRNLTTSITTLNHLHMLVGG
                     ADSLGNLTRRRQYGEVANLLEGILNVLEHFNKYMAIPQIRQLSDKVNSVKGELAQQIR
                     ADFEESFTGPAAKYGPGNQAQLAEACFVVNVLDPRVKKDLLSWFVKLQLSEYVVLFAD
                     DQDTAWLDKIDRRYAWIKRSLVDFEDKFGKMFPPSWEVSERICVEFCEITRKELSKIM
                     NKRSSEIDVKLLLFAIQRTINFEMLCAKRFCGRTLDSEASAAASPADTPLSPTNPFEE
                     ESGNPFAADMEEEGKAASTPLTEQHASQKQSTSPFLGLISKCFEAHLNIYIDSQDKNL
                     GELLNRFVSDFAQHGAPKIGPEEGSNVLPSCADLFVYYKKCMVQCSQLSTGTPMLDLT
                     KTFQKHLKEYAVRLLLTNLPKLTKQESSITSASGLIQSILKEGENMTKFTEDEQCRVC
                     SILCTAEYCMETTQQLEDKLKEKVDETLVASIDLSVQQDMFHNVISHCIGLLVQDLEA
                     SCEPALTVMAKLPWQNVEAVGDQSNYVSAIISHLKSNVPVIRDNLVSSRKYFTQFCIK
                     FATSFIPKFIHALYKCKPLGTVGAEQLLLDTHSLKTVLQDLPSLGSQVARKAPASYTK
                     IVVKGMTKAEMILKVVMSPHEPPQVFVDNYIKLLTESDLHEFQRILEMKSLRRNDQVM
                     MTDLYRSRNPTAAAGPAGGGGERGQINPFTSEHVEHSRIKKLEKLIKKRL"
     assembly_gap    45615..45664
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<47888..>48774)
                     /locus_tag="CAPTEDRAFT_209867"
     mRNA            complement(join(<47888..48020,48104..48174,48209..48419,
                     48752..>48774))
                     /locus_tag="CAPTEDRAFT_209867"
                     /product="hypothetical protein"
     CDS             complement(join(47888..48020,48104..48174,48209..48419,
                     48752..48774))
                     /locus_tag="CAPTEDRAFT_209867"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07900.1"
                     /db_xref="JGIDB:Capca1_209867"
                     /translation="MIALYQNSSRAASKQLPRNLTLSLALVCHHNDPPYLACYYQNYF
                     IAEEDNYIDDEAFKDISDNESLVKSTSHWYAQSQLQSKGGEAKRPRTEEIDFSHVNSK
                     ILDEDSPSSGGDKKSVARGAQHRSTAVSAAIRSPPNCPNGVFG"
     assembly_gap    51548..51601
                     /estimated_length=54
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <53613..>55884
                     /locus_tag="CAPTEDRAFT_209868"
     mRNA            join(<53613..53739,53804..53935,54934..55257,55488..55510,
                     55768..>55884)
                     /locus_tag="CAPTEDRAFT_209868"
                     /product="hypothetical protein"
     CDS             join(53613..53739,53804..53935,54934..55257,55488..55510,
                     55768..55884)
                     /locus_tag="CAPTEDRAFT_209868"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07901.1"
                     /db_xref="JGIDB:Capca1_209868"
                     /translation="MSKEDGMFWLPCKPSHGLWLWFSMNLRHHDPKVLSLYGGLECGR
                     RQNGIDNAVELAQECADAVKCLISRLPSKVKHYPGRQLQQSLNFECGSCIFTEAAAMA
                     NVYPPSDSDDAPLLREPSSGAIRQDGDDELLSDHSVEKILPRDDQEAPPPQVVVLPPP
                     TTGAFNEGMRRKIITIIILTAINLVNYMDRFSIAGLCLGLREFILTLIETTWINKSLN
                     MILAEHEEVATQFNGDLLRLFQ"
     gene            <62194..>67224
                     /locus_tag="CAPTEDRAFT_179917"
     mRNA            join(<62194..62401,65592..65797,65858..66213,66268..66411,
                     66473..66833,66889..>67224)
                     /locus_tag="CAPTEDRAFT_179917"
                     /product="hypothetical protein"
     CDS             join(62194..62401,65592..65797,65858..66213,66268..66411,
                     66473..66833,66889..67224)
                     /locus_tag="CAPTEDRAFT_179917"
                     /note="GO_component: GO:16021 - integral to membrane;
                     GO_function: GO:5215 - transporter activity;
                     GO_process: GO:6810 - transport"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07902.1"
                     /db_xref="InterPro:IPR005828"
                     /db_xref="JGIDB:Capca1_179917"
                     /translation="MKLPPDQLEILIQDDKAAEYKEVCKEDSDDSDASSTESEIQCSS
                     HRAFFTLTIMLFANLLNYMDRYTIAGVLVKVKSYYRLESEAQAGLLQTAFILSYMVLS
                     PVFGFLGDRFSRKAIMAVGILFWSLITLAGSFVPADKFWLFLLMRALVGVGEASYSTI
                     APTIIADLFVKTQRTKALSVFYFAIPVGSGLGYIVGSNVAEAMGSWQWSLRVTPVLGI
                     ICTALICLVVREPPRGAAEGGTHLHSTSWAADLKHLFKHKTFLLSTAGFTCVAFVAGA
                     LALWAPTYVYYSIMVQPNNLLPSNEVEAHVSLVFGIVTCVAGFVGVTLGSSLAAYLRP
                     RVKNADPLVCGFGLIASAPFLFLSIYMSRINTAATWVFIFIGETFLSLNWALVTDILL
                     AVIIPTRRSTAEAVQILVSHALGDAGSPYLVGAMSDMFAKARGNSGFLFEDYITLQYS
                     MYACCFVCVLGGGFFLTCAIFFDFDRKTANLAIKGNVAPSCAPDINLSRLFRFGTYSE
                     RNKQCIKRDHRRVIRSIHESNRSATSSS"
     gene            complement(<71113..>72267)
                     /locus_tag="CAPTEDRAFT_209871"
     mRNA            complement(join(<71113..71207,71263..71329,71360..71499,
                     71679..71762,71901..72027,72157..>72267))
                     /locus_tag="CAPTEDRAFT_209871"
                     /product="hypothetical protein"
     CDS             complement(join(71113..71207,71263..71329,71360..71499,
                     71679..71762,71901..72027,72157..72267))
                     /locus_tag="CAPTEDRAFT_209871"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07903.1"
                     /db_xref="InterPro:IPR007917"
                     /db_xref="JGIDB:Capca1_209871"
                     /translation="MAQYVVPNPNDVFFCPFEESHTIRALGAIKHLHKCAKSHPNMKL
                     SICPFNQIHWVKQEEFAHHVNKCPDKSRFQLSREQEQYIEKSNIYRDPVEDDHVFEEG
                     EDWTHEMDSDNVEDFCWNTHVASSARWAQPHEGPVIVPTVPPKARSIGSLIHEVPIRR
                     ANASFKLSPHFPSNVSTDSAVTLLQMNRGRGTSSSVQKPSGGQKIFS"
     assembly_gap    75134..75183
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<78941..>79096)
                     /locus_tag="CAPTEDRAFT_72383"
     mRNA            complement(<78941..>79096)
                     /locus_tag="CAPTEDRAFT_72383"
                     /product="hypothetical protein"
     CDS             complement(<78941..>79096)
                     /locus_tag="CAPTEDRAFT_72383"
                     /note="GO_component: GO:5634 - nucleus;
                     GO_function: GO:3676; zinc ion binding - nucleic acid
                     binding [PMID 8270]"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07904.1"
                     /db_xref="InterPro:IPR007087"
                     /db_xref="JGIDB:Capca1_72383"
                     /translation="YQCKHCTFSTNFHSVIEQHISTNHSQDRELMCPYCKVKLVDNDH
                     IMSHYNTH"
     gene            complement(<79448..>99535)
                     /locus_tag="CAPTEDRAFT_23056"
     mRNA            complement(join(<79448..79620,97264..97510,99377..>99535))
                     /locus_tag="CAPTEDRAFT_23056"
                     /product="hypothetical protein"
     CDS             complement(join(<79448..79620,97264..97510,99377..>99535))
                     /locus_tag="CAPTEDRAFT_23056"
                     /note="GO_component: GO:5634 - nucleus;
                     GO_function: GO:3676; zinc ion binding - nucleic acid
                     binding [PMID 8270]"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07905.1"
                     /db_xref="InterPro:IPR007087"
                     /db_xref="JGIDB:Capca1_23056"
                     /translation="FRCLHCVYGASTKQTMVEHIYHHTDIVPYYCGLCGAIFGTKGGV
                     KVHARREHKKFHQYQIPRFRSQGVKVRQQDTRHYNCLYCPMIAISKGDLRVHMLTHGP
                     DVMWTCPYCLFYNQMPMIFLENHIRSIHPGQAISHERFRCLHCVYVASSKFTMVEHIY
                     NHTNIVPFSCGLCGAIFGTRSGVKVHTKREHNG"
     assembly_gap    100525..100574
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <104700..>106353
                     /locus_tag="CAPTEDRAFT_209875"
     mRNA            join(<104700..104723,104918..104986,105155..105276,
                     105424..105509,106313..>106353)
                     /locus_tag="CAPTEDRAFT_209875"
                     /product="hypothetical protein"
     CDS             join(104700..104723,104918..104986,105155..105276,
                     105424..105509,106313..106353)
                     /locus_tag="CAPTEDRAFT_209875"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07906.1"
                     /db_xref="JGIDB:Capca1_209875"
                     /translation="MGDNACMKDVQMPYCCSSIYLRFHCNYCSSNITKLGCGGLNTNK
                     TVCNSLLELMTVSAQSGFNSRGFNNSMHRYLPKKVLMKSDIAVGEAHRLTRFHSLYGR
                     ITKRTDYMTAD"
     assembly_gap    105768..106201
                     /estimated_length=434
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    107703..120063
                     /estimated_length=12361
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    121126..121175
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    122927..123688
                     /estimated_length=762
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    126328..126631
                     /estimated_length=304
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <127281..>128816
                     /locus_tag="CAPTEDRAFT_209876"
     mRNA            join(<127281..127418,127902..128058,128307..128536,
                     128585..128681,128740..>128816)
                     /locus_tag="CAPTEDRAFT_209876"
                     /product="hypothetical protein"
     CDS             join(127281..127418,127902..128058,128307..128536,
                     128585..128681,128740..128816)
                     /locus_tag="CAPTEDRAFT_209876"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07907.1"
                     /db_xref="InterPro:IPR003124"
                     /db_xref="JGIDB:Capca1_209876"
                     /translation="MSGITKEKRKTRKRRGPKSREEAKAVTSSHPTTSGTAYSTKTSN
                     PKDYYIDTDVLAFLEECGISKDVLSDKKAAKFVLNFIQEKGGIEHVRNSARKKPSPPP
                     PPPPPPPPPPSSSKTKPAPSISGSGRGALLDSIKAGTTLKPANTQAAAARPKSKTDPR
                     SDLLNQIKLGIKLNKADKSPAPKHDISSGDDFAKSLQNALASKFAQKNDSDSSSSSDD
                     EDEYFDWSTDEWDD"
     gene            complement(128955..132339)
                     /locus_tag="CAPTEDRAFT_161375"
     mRNA            complement(join(128955..129396,129457..129906,
                     129961..130275,130328..130522,130582..130981,
                     131896..131963,132317..132339))
                     /locus_tag="CAPTEDRAFT_161375"
                     /product="hypothetical protein"
     CDS             complement(join(129101..129396,129457..129906,
                     129961..130275,130328..130522,130582..130972))
                     /locus_tag="CAPTEDRAFT_161375"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07908.1"
                     /db_xref="InterPro:IPR009716"
                     /db_xref="JGIDB:Capca1_161375"
                     /translation="MWEFATGMFLIALNPGSLRLTAIYTFSSGGTVLLLGAFVGSWVD
                     RYARLPVVRTAIVVQNLAVALSAAIVCITLGFEGQIRGTWDGWLMVVCEVLIILFSVI
                     ANVCSVARTIAVERDWIVVICPDTDSLTNLSALLRRIDLTTKLVAPIVTGQLITYGSM
                     VIGALFIAIWNFVTMFAEYGILRKIYYSVPELANKNVNNLDDSHEVRKTLLTGHSRRS
                     VAGSTSVALGIAHSVSHAIIKEEEQDDGPERGCCGSVCVMLCSSVMTLVNGWKTYMKQ
                     SIMLAGLSLSAIYMTVMAFDNITNGFAIEQGLSESMVGILQGVGAILGISGTLVFPRL
                     RQKVGLEYTGNIGGVLQLSALSLCLVSVFAPGSPFDANFFSESLPPCPEDTLNEASLP
                     LYAESVRSLSIASNMYQEISMFADSNSTDIPLDCIPLDQDPSFLSISLLMAGIVGARF
                     GLWIVDLTITQLLIERPIDSERGVVNGVQNSLNQAMDLIKSLLVIFLPWPQTFGFLVI
                     ISFGFVFIGFILFGSYSIKAFMRRRQGYDECEIAHRVEHG"
     gene            complement(133174..135947)
                     /locus_tag="CAPTEDRAFT_226612"
     mRNA            complement(join(133174..134016,134248..134404,
                     134459..134542,134626..135947))
                     /locus_tag="CAPTEDRAFT_226612"
                     /product="hypothetical protein"
     CDS             complement(join(133935..134016,134248..134404,
                     134459..134542,134626..135838))
                     /locus_tag="CAPTEDRAFT_226612"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07909.1"
                     /db_xref="JGIDB:Capca1_226612"
                     /translation="MSGIPFGSTEVIEVAKSGGLVGGGEDQPAIPPSDDDVEPIGPDD
                     EVDDERLLDPSIEIRRHPTRIIIVEPLMALFMATYVSSQVLTSQFALKLVSVRFNFTS
                     SGNDSCGPDMDPAVYELQQSVQARAAVLMTYFNVCSSVPAIFMVLFWGAYSDRVSRKV
                     PILLAIFGQMIKFTIMVITMTMRANLYLILVGAFVDGIFGGASTVAMSCMAYISDTST
                     PKDRTIRLTVIEVTCGVCSALSQVLVGFGITNYGFIIPLYVLIACHALNSLYVIFFVP
                     EIRYPRRGQRFVAKDHIFRTVRLYSTEDGNRKERLICLAALLFCSATIGGRFDPLILN
                     SLNSPLCWSSILLGIYTAWTSLSAQFGGITLVSLLFRRIGEMGVGIIGCLSGIVYFSI
                     LAFCHTTLSMFLVVLAGVGSFAPVPMIRALKSKLTAADQQGALFAGSMAMETFCSLIG
                     STVFNTIYSATVADFSGAVFLVMGGFELCGLVFVIVLAVLMRRRQPIELITSVQADEP
                     IND"
     assembly_gap    140674..140894
                     /estimated_length=221
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<148531..>149902)
                     /locus_tag="CAPTEDRAFT_209881"
     mRNA            complement(join(<148531..148916,149177..149535,
                     149724..149778,149851..>149902))
                     /locus_tag="CAPTEDRAFT_209881"
                     /product="hypothetical protein"
     CDS             complement(join(148531..148916,149177..149535,
                     149724..149778,149851..149902))
                     /locus_tag="CAPTEDRAFT_209881"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07910.1"
                     /db_xref="JGIDB:Capca1_209881"
                     /translation="MVLICESVSETPLTSNIYFMICVLYWILCGLLCERREDDGVVDD
                     ALEQGVHEGIVIDVVHDLVLCYAMGWSQYCSRKEVKEANMKYFSPCAIHDAKKILWMK
                     YSDSLGPLRARRRSEMRPKHEFEVDGLQKLASEDSLPRFVLSSEELRATPPRPERNDP
                     SEWKQQRPRNRPRRRTPLVGKADGAACNFRGAPPPLRHLFFSRVMKDVKGEDVKDHLK
                     RCAPDIDVSSVECVSHANAKFKSFKLGCRLINEHFDPDKTATEIIPGAMCWMGVQDSP
                     TKNQSES"
     gene            <154598..>155683
                     /locus_tag="CAPTEDRAFT_5244"
     mRNA            join(<154598..155342,155394..>155683)
                     /locus_tag="CAPTEDRAFT_5244"
                     /product="hypothetical protein"
     CDS             join(154598..155342,155394..155683)
                     /locus_tag="CAPTEDRAFT_5244"
                     /note="GO_component: GO:16020 - membrane;
                     GO_function: GO:8375 - acetylglucosaminyltransferase
                     activity"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07911.1"
                     /db_xref="InterPro:IPR003406"
                     /db_xref="JGIDB:Capca1_5244"
                     /translation="MTSNCAEFISKRTYSMRALSSEEAEFPIAYNILVHKDTELFERL
                     LRAIYQPQNSYCIHVDANSAEDFQTVIQKIAGCFPNVFIASKLEHVVYAGFSRLQADI
                     NCMKDHLERGVKWKYLLNLAGQAFPLKTNAEMVKILKIYNGVNDIEGIYGARVHRSRF
                     ENEYLEVNKKTLKKTGAKNPQPPHDIDIVRGSAYGVFSREFVHYIITDAYAIDLLKWS
                     EKTYSPDEHYWATLHHTYTNPHMDVPGSYSGNPNKKPWLAVYVKWGGVDKCYGMWKRG
                     VCIFGAADLPDLRDRHEMFCNKFFLDVQPVALDCLEAWIQHKTFCPSPIDHNFYSELP
                     FVKQLSKSWF"
     gene            complement(158411..159562)
                     /locus_tag="CAPTEDRAFT_161379"
     mRNA            complement(join(158411..158711,158953..159053,
                     159107..159218,159514..159562))
                     /locus_tag="CAPTEDRAFT_161379"
                     /product="hypothetical protein"
     CDS             complement(join(158466..158711,158953..159053,
                     159107..159218,159514..159555))
                     /locus_tag="CAPTEDRAFT_161379"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07912.1"
                     /db_xref="JGIDB:Capca1_161379"
                     /translation="MADRLTQLQDAVNQMADHFCNAVGIMQQMAPPGQFAGFEKSVSK
                     QAQVTSDEHAALFAQLIARTAKDIDVLIDSLPSEESTPELQMASLLQLEQDNQEAAQE
                     LQHAVDHGTLVLQSTQSAMHSIAQAQLDSQALETQDAFASVGPLPEEEMDGQSQYSDV
                     TNDGCL"
     assembly_gap    164299..164348
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            167173..170339
                     /locus_tag="CAPTEDRAFT_161382"
     mRNA            join(167173..167261,169522..169790,169983..170339)
                     /locus_tag="CAPTEDRAFT_161382"
                     /product="hypothetical protein"
     assembly_gap    167918..168143
                     /estimated_length=226
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     CDS             join(169535..169790,169983..170059)
                     /locus_tag="CAPTEDRAFT_161382"
                     /note="GO_component: GO:5622; ribosome - intracellular
                     [PMID 5840];
                     GO_function: GO:3735 - structural constituent of ribosome;
                     GO_process: GO:6414 - translational elongation"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07913.1"
                     /db_xref="InterPro:IPR001813"
                     /db_xref="JGIDB:Capca1_161382"
                     /translation="MRYVAAYLLAVLGGNRAPQEADIKAILSSVGIDADSANIKKVIS
                     ELKGKSIEDVIAEGQSKLASVPSGGAAAAPAAGGAAPAAAAEEKKEEKKPESEDESDD
                     DMGFGLFD"
     gene            complement(<173384..>175398)
                     /locus_tag="CAPTEDRAFT_132232"
     mRNA            complement(join(<173384..173602,173654..173727,
                     173827..173914,173967..174127,174178..174268,
                     174336..174393,174451..174514,174573..174785,
                     174884..174981,175031..175122,175237..>175398))
                     /locus_tag="CAPTEDRAFT_132232"
                     /product="hypothetical protein"
     CDS             complement(join(173384..173602,173654..173727,
                     173827..173914,173967..174127,174178..174268,
                     174336..174393,174451..174514,174573..174785,
                     174884..174981,175031..175122,175237..175398))
                     /locus_tag="CAPTEDRAFT_132232"
                     /note="GO_component: GO:5634 - nucleus;
                     GO_function: GO:3677 - DNA binding"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07914.1"
                     /db_xref="InterPro:IPR001005"
                     /db_xref="InterPro:IPR007526"
                     /db_xref="JGIDB:Capca1_132232"
                     /translation="MNISQSVCHSCKTSITEPFILCSDCPNRVTICLPCFAKGRTFDA
                     HQNNHSYEVVRLDFILFEPKWTAAEEIRLLQAVNDCGIGNWHDVSGKVRTKTGSQCQK
                     HYTKCYITDPVKPLPDVRPVTLASAFNRSFSAVCDDPPRPSEGSSTYQDMSGYMPARG
                     DFLTEFCNFAENELSDIEFNKLDQEFDRKLKFAVVDIYNNVLRERFKRKRIIRDHGLI
                     NIKHHNCESHSFMHPRLLEQLRVFMQLSQPEDWEKQMQALNYEAELRSCIRQLQQYRA
                     AGIQHLSSAKIYNKLLQRRQEEMSFRSGHRSIMQSAQSDALCEDWLNKNNVFDRIQRG
                     IPVSAHPPVRKPAPPLQISGLPAFEKLNESERKLCSSVRLVPESYLEFKKILTNECCK
                     HGYLRLATARTLIKIDVNKTRKLYDFLLKQKLISKDPPNEKVREILK"
     gene            176203..179474
                     /locus_tag="CAPTEDRAFT_161384"
     mRNA            join(176203..176241,177497..177662,177728..177828,
                     177884..178090,178158..178328,178378..178503,
                     178611..178703,178749..178838,178889..179026,
                     179072..179171,179234..179474)
                     /locus_tag="CAPTEDRAFT_161384"
                     /product="hypothetical protein"
     CDS             join(177521..177662,177728..177828,177884..178090,
                     178158..178328,178378..178503,178611..178703,
                     178749..178838,178889..179026,179072..179171,
                     179234..179325)
                     /locus_tag="CAPTEDRAFT_161384"
                     /note="GO_function: GO:16491; acyl-CoA dehydrogenase
                     activity - oxidoreductase activity [PMID 3995];
                     GO_process: GO:6118 - electron transport"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07915.1"
                     /db_xref="InterPro:IPR006090"
                     /db_xref="InterPro:IPR006091"
                     /db_xref="InterPro:IPR006092"
                     /db_xref="JGIDB:Capca1_161384"
                     /translation="MFVRRICRQAVAMVARNQPLSSWRSCSSATHLPVDLFSEDEIMM
                     RDSVAKFAKEVMEPLVPQMDEECQLPKSLLDGLFANGIMGIEIPVEYGGVGASFFTSI
                     LTIEEIAKVDMGVSVLVDVHNTLINNLFRSLGTPEQQEKYLPRLASNMVGSFCLSEEG
                     SGSDAFALATTAKADGDDFVINGSKMWISNAEQAGVFLVMANANPEQGYKGITTFIVD
                     RDTPGMTIGKKEKKLGINASSTCPVHFDDVRVHKSAILGEYGHGYKYAISMLNEGRIG
                     IAAQLIGVAQGCFDRTIPYVMQRKQFGRSVWNFQGMQHQMATVATEIEAARTMVYNSA
                     RRQMAGVPFTKQAAMVKFLASEVACKTTSKCVEWMGGVGISKDYPIEKYYRDCKVGTI
                     YEGTSNIQLNTIAKLIEAEQREMGHGI"
     gene            complement(179577..188545)
                     /locus_tag="CAPTEDRAFT_179932"
     mRNA            complement(join(179577..179956,180010..180143,
                     180194..180280,180340..180442,180496..180625,
                     180679..180772,180837..180919,181044..181120,
                     181616..181713,181769..181834,181888..182011,
                     184258..184424,184475..184498,184557..184640,
                     184696..184780,184834..184922,184974..185041,
                     185159..185258,188442..188545))
                     /locus_tag="CAPTEDRAFT_179932"
                     /product="hypothetical protein"
     CDS             complement(join(179851..179956,180010..180143,
                     180194..180280,180340..180442,180496..180625,
                     180679..180772,180837..180919,181044..181120,
                     181616..181713,181769..181834,181888..182011,
                     184258..184424,184475..184498,184557..184640,
                     184696..184780,184834..184922,184974..185041,
                     185159..185258,188442..188510))
                     /locus_tag="CAPTEDRAFT_179932"
                     /note="GO_function: GO:16868 - intramolecular transferase
                     activity, phosphotransferases;
                     GO_process: GO:5975 - carbohydrate metabolism"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07916.1"
                     /db_xref="InterPro:IPR005844"
                     /db_xref="InterPro:IPR005845"
                     /db_xref="JGIDB:Capca1_179932"
                     /translation="MWKFVTGDSDVDVRLQEWFGWDKNEKTRAELEKLVAENDVVELR
                     KRLLTRMEFGTAGLRSAMGAGYSRMNDLTIIQTTQGFGHYMLKVTPNVKDRGVVIGYD
                     ARHNSRRFAELASTVLLNLGIRVYLFSKITPTPFVPFGVVRLKTDWGIMVTASHNPKQ
                     DNGYKVYFRNGAQIIPPHDAGIAASILEHLTPEGSSWDTSQLAHRLQPDPFAELWQAY
                     MASVTSLSFSRSTNSDSPVNFTYTAMHGVGYEAIQAATKAFNFKAMIPVLQQVEPDPE
                     FPTVKFPNPEEGKSALDLAIQTANENNCTVIVANDPDADRLALAERNEAGAWHVFTGN
                     DIGGLIGWWLITQRPLASDMYCLSSTVSSKILRSICLKEGLHHVETLTGFKWMANGAI
                     DLMNAGKSVVFAFEEAIGFMCGTEVLDKDGISAAMVAMEMTSYLYRQGLTLKQQLDKL
                     HITYGHHVSNNSYFICHDSTITKKMFDRLRDYEGSGFYPTHCGPYRILNVRDLTTGFD
                     SRHPDKKADLPSSASSQMLTFYFENGCEITLRTSGTEPKIKYYSELCVPPEKGRSRES
                     VETELKEVVRNMIEHFYQPELNHLIARSS"
     assembly_gap    198453..198502
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    200366..200415
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     assembly_gap    201813..201862
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(208802..218122)
                     /locus_tag="CAPTEDRAFT_226618"
     mRNA            complement(join(208802..209657,209714..209847,
                     210651..210718,211590..211742,211956..212229,
                     214658..214970,217763..218122))
                     /locus_tag="CAPTEDRAFT_226618"
                     /product="hypothetical protein"
     CDS             complement(join(209371..209657,209714..209847,
                     210651..210718,211590..211742,211956..212229,
                     214658..214970,217763..218012))
                     /locus_tag="CAPTEDRAFT_226618"
                     /note="GO_component: GO:5634 - nucleus;
                     GO_function: GO:3700 - transcription factor activity;
                     GO_process: GO:6355 - regulation of transcription,
                     DNA-dependent"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07917.1"
                     /db_xref="InterPro:IPR001699"
                     /db_xref="JGIDB:Capca1_226618"
                     /translation="MTNVEKASAFAIASLMSDPSSAPADGGAPSLAPPPYAPHPGAVP
                     PVSRQQGDCGVSANSYFDMDWASMAPQTNGCATGLKGMEACVSVCADRASYYGSGAGA
                     GGSSTHASAGGDGPAGSNEGMGSNVDGEKSGEAKEEKDEEDDEKVEKEKKPLHSKLVN
                     VQAHLEMKPLWDEFDSLGTEMIVTKAGRRMFPTFQCRIYGMDPMSDYMLMMDFVPVDD
                     KRYRYSFHSSSWVVAGKADPHMPGRIHVHPDSPAKGAQWMKQIVSFDKLKLTNHLMDD
                     NGHIILNSMHKYQPRFHVVYVNPKNEDVSHTENFRTTIFPETKFTAVTAYQNHRITQL
                     KIASNPFAKGFRDCDPDDCVVEVLTHLNPSQRPRNHHRPSSLQLLGIASKAQTGSTST
                     PPSTRSPNSCIDQKVSPGSYHMHGLHAAPDQQFPAHAYSDPLASYPTYNPYAGMDSSY
                     FNMNKARNTPYARSTAEYPTYFPRVAGLHPRTNHVTYDYGTG"
     assembly_gap    216622..216671
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <228200..>228925
                     /locus_tag="CAPTEDRAFT_37161"
     mRNA            <228200..>228925
                     /locus_tag="CAPTEDRAFT_37161"
                     /product="hypothetical protein"
     CDS             228200..>228925
                     /locus_tag="CAPTEDRAFT_37161"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07918.1"
                     /db_xref="InterPro:IPR006904"
                     /db_xref="JGIDB:Capca1_37161"
                     /translation="MGTFVGHALPGAFFALFSLWWLSQIPRRFVFCSRRNLAFRNTAT
                     YPVKGSGCCGKCPIEGVIKMSVTLIGMMAELYAATGYGDNSSGIVWGDIQHLTMYLFF
                     FLSGLIDVLTQRRCLAVPPGSDYALASLAFGAEWLLFSEHLRGRPPLDVHLHSILLYV
                     IAACVMVTLLEYKHPHCLLLGLLRCACVLLQGTWFFQVGFVLYPPTPHLHHWDEDDHE
                     NMMLATVIFIWHLGACVVFVVIMF"
     gene            complement(<229908..>232363)
                     /locus_tag="CAPTEDRAFT_209893"
     mRNA            complement(join(<229908..230038,230236..230324,
                     230387..230581,230636..230815,230880..231004,
                     231062..231254,231314..231369,231421..231514,
                     231571..231725,231783..231920,232268..>232363))
                     /locus_tag="CAPTEDRAFT_209893"
                     /product="hypothetical protein"
     CDS             complement(join(229908..230038,230236..230324,
                     230387..230581,230636..230815,230880..231004,
                     231062..231254,231314..231369,231421..231514,
                     231571..231725,231783..231920,232268..232363))
                     /locus_tag="CAPTEDRAFT_209893"
                     /note="GO_function: GO:3676; helicase activity - nucleic
                     acid binding [Evidence 5524] [PMID 4386]"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07919.1"
                     /db_xref="InterPro:IPR001650"
                     /db_xref="InterPro:IPR011545"
                     /db_xref="JGIDB:Capca1_209893"
                     /translation="MDQKWDDLPKRLRTCTRKTIDRLNFKLMTPVQAACIPLFLSNKD
                     VAAEAVTGSGKTLAFVVPILEILLRRETPLRSKDVGALIVTPTRELAVQIDEVLGEFL
                     KEIPHITHQLFIGGNNPMTDVNKFMEHGGNILVATPGRLVDMLNRRDEGLDLTASVKA
                     LEVLVLDEADQLLAMGFQRSLNTILSYLPKQRRTGLFSATQTKELEDLIRAGLRNPVR
                     VAVKERGAHGEEVNRKTPASLMNYYMIVESDQKFNHLVAFLQLHKDEKHLVFFSTCAA
                     VDYFTKALKHVLKKMQIFCIHSKKESRNKIFTSFRKMKGGVLVCTDVMGRGVDIPEIN
                     WVTQYDPPSSSSNFVHRCGRTARIGHTGSAIVYLRPIEETYVSFLSINQKVPLVEHVP
                     PDDVPDHTAALKKLMLHDRAMYERGMKAFVSFVQSYAKHECSLIFRVKDLDIAKLANG
                     FGLVRLPRMPELKGREFPDFVPTEVDPNTIKFA"
     assembly_gap    233713..233762
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            complement(<236008..>236818)
                     /locus_tag="CAPTEDRAFT_209894"
     mRNA            complement(join(<236008..236072,236264..236488,
                     236548..236708,236799..>236818))
                     /locus_tag="CAPTEDRAFT_209894"
                     /product="hypothetical protein"
     CDS             complement(join(236008..236072,236264..236488,
                     236548..236708,236799..236818))
                     /locus_tag="CAPTEDRAFT_209894"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07920.1"
                     /db_xref="JGIDB:Capca1_209894"
                     /translation="MVFLVLSIPGLPTANAQCFCEEPGKIEYCDDIVEICNPCNFICE
                     DADKWETVEECRSFCPEWRKTEEFDSLVANSQEMSTFGTHLMNKTVAKVTDSTEIQEP
                     TEDKSLLVIAPIIVMSSICVLGAGITLIFSYYSEYSHQKPHKEPRDSHYVLKTV"
     gene            <237721..>239365
                     /locus_tag="CAPTEDRAFT_226621"
     mRNA            join(<237721..237799,238192..238303,238597..238799,
                     238853..238916,238976..239099,239153..>239365)
                     /locus_tag="CAPTEDRAFT_226621"
                     /product="hypothetical protein"
     CDS             join(237721..237799,238192..238303,238597..238799,
                     238853..238916,238976..239099,239153..239365)
                     /locus_tag="CAPTEDRAFT_226621"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07921.1"
                     /db_xref="InterPro:IPR010441"
                     /db_xref="JGIDB:Capca1_226621"
                     /translation="MAAEIVKFQIPKIVDMHNYNPTSSVEVMVAELIRYFIPRGVELH
                     NYSPGSSTRVKEHNWFHLNKKVLRRLDFEVDPNVIRNIVHCRPWAIENFLVLLREKMD
                     AYLMLRDTSRFAHGDANEAPEVDQQQSRAGNQGHPIPGARHSPQNDRRTNRARAVPQK
                     QFLSPRNKAGQELVPKSLLLQKQEELMAKEETIQILAAKIGGLEKLISLKDIRIDDLT
                     ARIGEIENFRPPAKGMRKGHSHPRLSDAGTRGGGGAGVRGGGFFQR"
     gene            complement(<241142..>246490)
                     /locus_tag="CAPTEDRAFT_209896"
     mRNA            complement(join(<241142..241292,241610..241724,
                     241781..241895,242000..242236,242350..242537,
                     242748..242925,242976..244206,244255..244406,
                     244458..244593,244649..244876,244943..245048,
                     245242..245501,245615..245845,245903..246086,
                     246138..246261,246318..246389,246455..>246490))
                     /locus_tag="CAPTEDRAFT_209896"
                     /product="hypothetical protein"
     CDS             complement(join(241142..241292,241610..241724,
                     241781..241895,242000..242236,242350..242537,
                     242748..242925,242976..244206,244255..244406,
                     244458..244593,244649..244876,244943..245048,
                     245242..245501,245615..245845,245903..246086,
                     246138..246261,246318..246389,246455..246490))
                     /locus_tag="CAPTEDRAFT_209896"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07922.1"
                     /db_xref="JGIDB:Capca1_209896"
                     /translation="MSATSISCSTEESTCFTRVRYEAGSLRSTKGCILKQDCQDYLAN
                     NAEGCSRGIVSSGICSYCCEDPDHCNYDRFPYSDTTPAPTTTTPMPISAVTIPHSGMP
                     CNSSTAEDSLNACMAQYRGQVAWTLQNSLERFGEFCRHVPDVLHCVATSLEDCICLND
                     AANPVTILTPALKLLAAQCPSQCNQTAGLQCIQHSQSRILNIMTGSSDFSCGVLYKEV
                     TSGFQCVHFSVSSCSHSTFVSYNVTQSYSHSAIEKLCPMSTPSTFHAGVTLPTSGRIV
                     QTRFPPEGSTASPVVSSTRTTDVPATEDPRCNIEAVNDCLAGLGHAVVQARVEGLSFD
                     NICQQLLPATSLCLLTHSDACSTELKQRFQFAKDYIDGLMGAECLVTTPAPVCDPTRA
                     RLCVVRQWELIEGDYSIQEACDAVANTTECVRYNSQDCTIEEKSSLNTTLYNVLELLG
                     DKCVKDAAQCNNETIIELEEGGSAHDIEFQFKKLSISLCDEPDCEVVLKLEAESQDTN
                     PKCLNGQRIPQFVIGRPHGSGSACKEVITSGNWRDVRKYKISAKTDLKLDGNSEQKLR
                     IVVKKVVGGQVVESNILCVYTVRVIDKDAPTVPSCTIWNDPHIRSFAKLRYNMHTEGW
                     YQMYRHKTHPIEVQVGYQKCSSRATCICAAAIRAGDTVYVMDRCKRNGVTKCNRCKNQ
                     LINAQLFFHKEITPGFRMFMSEAGTRMDIQLPHGTVVTLKESNNFFNVVVNPSSADYL
                     ATRGLCGIYGEEHTYFLPNGTEIYPKRSPSWKVFFQSWRIPDEDLLVNGVARGPFRLP
                     ADYCDCLQGDDTCRDGNNNACGICTTKCEDVTETFPGINLHNDTEQTQEEQQNQQKTN
                     TSDYIFDYKFLGNESVLHPNWTEAEAQQFCLRKLVEMSPVVTECLKVPGFEHQGQIDW
                     CAQDIALTGDVNWADTHLEALKINCEQSINANVDFYSNEEGANITKSIYNLICTNECS
                     GNGECKKGVCVCRGGFSGQDCSVELDQRPEVYQLPNGGVCDTIGTRTCQNSYVTGDKF
                     AGDEYCHVTSANMVEQLPAEESTIVSKASILTSQQLFCGIPVSTTAVQSHTIRLSYSE
                     SSEMSTPLVYVTFNSICHDCQIMENSVVKCSRKNTGCVIDGVCYAEGASKPDDECMRC
                     SNGDNEDEWSRMKTLRCRLHLVYIVVGAIAALIIIVCITVCVCYACSKKEEAPPSNYS
                     SAPRSLSVVYVSNCSEPSSPVKIGSGFRPGSNFPESRSPDIVF"
     gene            <248804..>250259
                     /locus_tag="CAPTEDRAFT_209897"
     mRNA            join(<248804..248864,248970..249148,249321..249435,
                     249736..249894,249955..250125,250188..>250259)
                     /locus_tag="CAPTEDRAFT_209897"
                     /product="hypothetical protein"
     CDS             join(248804..248864,248970..249148,249321..249435,
                     249736..249894,249955..250125,250188..>250259)
                     /locus_tag="CAPTEDRAFT_209897"
                     /note="GO_component: GO:5737 - cytoplasm;
                     GO_function: GO:5529 - sugar binding;
                     GO_process: GO:6817 - phosphate transport"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07923.1"
                     /db_xref="InterPro:IPR001304"
                     /db_xref="InterPro:IPR008160"
                     /db_xref="JGIDB:Capca1_209897"
                     /translation="MELRLGWIFLLSLVTRAYSQSCPKDWRLMGSRCYWVYLYSDSAN
                     EDKTWTAARTNCQLAGGYLVSINDDYEDNNVNIIRRVAGIPDDSYYWIGLSDRTTEGV
                     FEWEDGSPADFVKFLTSAGEPNSRNPTDSLAAIEDFVVASGKYLWSDVRNDWSNVINT
                     RTEPSGFICETGAFLPPGPQGLTGPNGPPGSPGPMGVAGPPGTPGPAGLKGSPGPMGT
                     AGPTGPIGSPGIPGEKGEQGISGTPGLKGETGNP"
     gene            <250541..>251071
                     /locus_tag="CAPTEDRAFT_132238"
     mRNA            <250541..>251071
                     /locus_tag="CAPTEDRAFT_132238"
                     /product="hypothetical protein"
     CDS             250541..251071
                     /locus_tag="CAPTEDRAFT_132238"
                     /note="GO_component: GO:5737 - cytoplasm;
                     GO_process: GO:6817 - phosphate transport"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07924.1"
                     /db_xref="InterPro:IPR008160"
                     /db_xref="JGIDB:Capca1_132238"
                     /translation="MGVQGPPGEKGQRGDPGADGVPGTDGEDGEIGLPGSRGPEGPFG
                     SPGVPGTIGAPGSPGPDGRRGEDGAKGLPGDKGVRGDIGDKGPQGDIGPLGTKGPQGD
                     AGQPGSPGAKGERGNVGLPGPLGPQGERGEKGSDGDQGPAGAMGPTGPTGAPGTRGPM
                     GRIGLDGKINLCYYSF"
     gene            <253327..257247
                     /locus_tag="CAPTEDRAFT_226622"
     mRNA            join(<253327..253449,253753..253821,254631..254732,
                     254947..255042,255612..255685,256054..256189,
                     256255..257187,257238..257247)
                     /locus_tag="CAPTEDRAFT_226622"
                     /product="hypothetical protein"
     CDS             join(253327..253449,253753..253821,254631..254732,
                     254947..255042,255612..255685,256054..256189,
                     256255..256605)
                     /locus_tag="CAPTEDRAFT_226622"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07925.1"
                     /db_xref="JGIDB:Capca1_226622"
                     /translation="MLKRKGTFIWLLVGIVLVLMLIKTFSQVKNESETQEIFMHEVDL
                     PLPVYEVWKYRWQDRLLAPKLLAADPDDDDLANTPHEEFQDGSSIKKTICNPRQLEEV
                     PGAQIIGDNEEIYVESEMKPRTICNPRQLLCERRRDPLFDGLHKIDAQELTHSVGLKG
                     EVKGNITYHNIGLWGDDFENSNGWQMMKFSSIVKKLGHENRVIDVVKMDGRGAEWPFF
                     RDIAMDPSPLDRVKQFIFDAYAPRRKPRKQIMRMTDYAQVFRSVSLIKRLGFRNFWHH
                     GADMSQACCNWWADLVPPQISGADTTICCYQVFLVNMNYL"
     gene            complement(<259395..>265312)
                     /locus_tag="CAPTEDRAFT_209900"
     mRNA            complement(join(<259395..259426,262000..262254,
                     262307..262739,262864..263463,263523..264879,
                     265302..>265312))
                     /locus_tag="CAPTEDRAFT_209900"
                     /product="hypothetical protein"
     CDS             complement(join(259395..259426,262000..262254,
                     262307..262739,262864..263463,263523..264879,
                     265302..265312))
                     /locus_tag="CAPTEDRAFT_209900"
                     /note="GO_component: GO:16020 - membrane;
                     GO_function: GO:8067 - metabotropic glutamate, GABA-B-like
                     receptor activity"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07926.1"
                     /db_xref="InterPro:IPR000337"
                     /db_xref="InterPro:IPR001828"
                     /db_xref="JGIDB:Capca1_209900"
                     /translation="MSLVSDMETYLTFFLLTFGAVTGQQCPANCQATIKSYAFSPADE
                     TNSQFIYIGGIFDVHKPGTSRLACGDIDGRGVQNLEAFLWAVDTFNDRYVNALKGISI
                     GAIAFDSCGNGLRAARNVLNIETCQVGYGIPVPVNPDRLLGYVGPSTNEEAADFIPVL
                     ESLTKTAISHSASAGSGNINEEYFFRTVPAISEEATALVGIVRNMDWKYVQTVSTSTS
                     YASDGIAQFKTLAEKESICITQSLVIPNPASDSQMDSLLDNLADNQDTNVVVLYAEPN
                     SVRKILMASSRKKMRGKFIWIGSSSWGINKEVVEGFETFAEGALTVTLGNSASGSGYF
                     YNHLEGLKSSSEDPWLAEYLAYLQVTNLTGVELDIYTNYTIIAVDTILNAIETARASV
                     CSSNGLCSQFINSANKLGLIRNAVTNGDYPIRFNSTTGGTISGKYAIYNFRAPHGNMA
                     KHGYVQVGSYDKLDDEVHLSRSDVYEYDVDGNRISDISQLNPSCRSDLCEMCEIMFTE
                     VTPPGFSTATVDASSEGQDSSAQSEIRDDPWLIVLLVLTTLGIMAVVIFELYFLYKLS
                     GTEIFSHWKSMWLGQLLLFAIFLCYLTLYAFIQRPSGPSCAIIRFGIGVTYAMCFSIL
                     LVKLMIIFSSEKYGSLQGTYQFLMFLFTWAVQAHRMETNHRESLXIGLASGVSIPIWL
                     VWLLLGFLMDDPGYHEPCLAFGLWATATWILLVMFVPKAHQLSKGVDDFDEDELEGIP
                     SVIHGGSILHDMSTGSIIGDGGTINTGIDPALLETDRDSIVFTPNGAYTQPIIKSSQF
                     DPAALHLRHPGSPTYRTGSLASVPIGPHMAPHYATNPRVLHVSKDLLGLSGPQKKHTQ
                     SELNYNVYYGPAKLVANKSNGHPRAGTLKTARSIDLGPL"
     assembly_gap    262791..262840
                     /estimated_length=50
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
     gene            <266010..>277296
                     /locus_tag="CAPTEDRAFT_209901"
     mRNA            join(<266010..266012,267282..267450,267602..267751,
                     267799..267965,268014..268925,268979..270409,
                     270472..271764,271821..271983,272037..273319,
                     273372..274793,274845..275098,275295..275842,
                     276185..276357,277201..>277296)
                     /locus_tag="CAPTEDRAFT_209901"
                     /product="hypothetical protein"
     CDS             join(266010..266012,267282..267450,267602..267751,
                     267799..267965,268014..268925,268979..270409,
                     270472..271764,271821..271983,272037..273319,
                     273372..274793,274845..275098,275295..275842,
                     276185..276357,277201..277296)
                     /locus_tag="CAPTEDRAFT_209901"
                     /note="GO_component: GO:16020 - membrane;
                     GO_function: GO:8067 - metabotropic glutamate, GABA-B-like
                     receptor activity"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07927.1"
                     /db_xref="InterPro:IPR000337"
                     /db_xref="InterPro:IPR001828"
                     /db_xref="JGIDB:Capca1_209901"
                     /translation="MTGFFYTVIFLVSLTTVSCSLAETRCISRNPIVQEDADAFIGVI
                     LSLREHSDSERPCASMYGYPTTGLKIVDSCQSKEFGASALLDWYPKLMESGGLCQPSK
                     THLFLGVIGESQSNTTAAVADFLSQFHITQISYESTATYLRNLTSYPYLLKTIPSSQR
                     QINVAIDLLLELSWNQFIIVYDNIEESFHQFNLLSDLIDNEELCTVATVKLDPPQQGL
                     QYYYQHLISRVLASETKAVVYIGQKSNYLDFIKEMSTNGETGTLQWLVLTIDEPLQVD
                     DLNENTHYRGILTIQHLPRLLPEFENHWVKIDPNDPPWYDMWFKEWYMLRHKCKLKNI
                     STAPFNDYDDCPELDEATRREEYHPSIKTEGSVLALYTYARALRDAHKALCGGTPGLC
                     NALFDLTPKQFFTDYIKNNGFTFEYQERIPSLASSNLSPFFRPKSVEFDATQEIEETT
                     YKVINFNNKSGNFQLSEVGIYMDDYLSVSWIDIEFYDLNRTKVLKSPPTYSCHDGQCM
                     ECQEMTAFDWRTPEIYYTPGDILIAGVFSLHEKYTFSCGKFIDQEAQLIAAYQYGLQS
                     ANQMAIFNNGLKLGGVVIDDCSNSLYAAATLASLLSGDKREEFPGADFILGGVAGDFR
                     GLIPKLVSEGVDLSVIGYEADGLLISENYHYNYSAISVPSVVHEVQALAILLKRLGWT
                     YIQFIFTEDDTMLKTVKDILADHEICIAKAYIIKPSTSYADLCTQMMRVPGANVIALF
                     GNKDHYKKLISAVAGLYPAFEDFVMITGPGIGRSLDLVQKFGGTVNRDISLSYRTTNI
                     PGYIEFIRSINPFTVVKENEWFREWYQEAFYCFLDADHPGPYTQKCFGYPITSATNFR
                     SNDYVISILNSVLSLAQGIHKTLVDICGADYDYVCSESLISEEYKTLLIQNIMSTKFT
                     DESGNQFEFSNKEAPRIIDAHLLDGGSFYEVGSYSSKSGVLAFNEENLERISRKISSE
                     CPTVNCLECTYMFYGDDEHLLLPGDFNIGGLFNLHIDGFNPYSCGTATRADNIQAIEA
                     FISAIQDVNNGTAPVSLQDVQLGAVIFDSCSSPPRASRLLGSFYTEDVRIEPHTRDHT
                     LAWVTSASEITFDVARLLADLHIPQIGVYSDSYKLYQNSQTEDVFYTISNSQEMARAL
                     ANFLNAMKWKYVSIVYSANEWCLSFLDAIQSLFTERNICIMDLFSIAATPAYSSDVVI
                     GFVETDDLDVLIGSVSTRQLIVVAATDTPLGETQLPPGSIILTYPPEEMYSTLHSELV
                     KTWLPNLYQNCNEDHNDDCTNVMSEDNNIVYSIANAVYAVANALHLVLEENCGQAYSG
                     ICADLQQPQIPGLIQNKLPLVTFNETNGGIFKIDDNYFHQGYVFILTKSDGSFETIAE
                     YRELTLEFLTTDLDNLYHKVTSDCSVPCMQCQYLSQNGGDITFQSGDIVIGGIFDVHE
                     TGDGPFTCGNIKLHQGVQLLEAFIYALETVNKHIGMFSDLLNGVELGFLALDACENSL
                     RAANLVTNIHNGITDLDEISSDRIGVYIGAFDSETTMKTGEILNSISVPQITYGPSSS
                     DLDQYPMFLRTVPGDNQQAKAIVAFLLQYDLSYIQVVFSNYDSHIHTSISFLDLAERS
                     GVCVSQTVNAGEENQALTGNLVEALIEKLQKKSSAKVIVAFMESSSIRPLLERIRASD
                     NFKFIGSTSWSNDVAIIEGLVQFSNDIVTFGVETSDVPGFDSYLTSLDPLKDQHQWFA
                     AYYEEICQCSLQYRPSSRFKKPCSVTLGGIVRDCPYQQDPYILYTVNAVFSAALGIDK
                     AIRKICGENYDGLCEDFISNDHWRQMVYDGIQETEFIDATNQVFRYSDQGESTRGFHI
                     YSVERIGETTAAYGNVGSYNETQNLKINTRFSLNWESSCKKTGSCMECPELKSHQKFY
                     AQLSTDNLNLLGLFKIHSMANENSFSCGMLDIDAGFQNALAFFYAINLANSKSTTVQI
                     GGALIDTCGHSEIATRDVLSLVTEQGIRLETKTLSLGSTFAVLVDSTDTNEGADILRE
                     ESVTVIDVGANADNANDYSLDMMPIVVASGAAIAALTEEMSWDYVSLVYSVEQIHTEA
                     AKQFLTRVRRASSVCIAVSMGMKPDLTHSDAQDIVEKLVAKKGARIVVVFGNRDQLVL
                     LSSASEIVDTNFAFIFGNPFEYLGGTFDVAPGSIVLSLRRPTIEGFRDYLESLTVANH
                     GSIPDRWFEEFWQRLFHCQLQNATIRLTEYSTICSRTDRIIRDDISIGHSAMYTIIAT
                     QLSITGLVNIPECQSSSAVGNCLSLTASKRNSIFRRIKEAQWIESSPPEEDFIFRFNE
                     EGEGEIEIQFLNVVLDGEAQVDVKQIGSFYGGRLSLQRNAYRAIDSKGRATTIVVSQC
                     IIGTNCACVNDTGFLKQPDDTAASVSSGEEDRKQFRETLGNFDGNSKWNFVRSLLVKV
                     VFFWRSDIYQKNFFDPSSDKALHPVTLLFIVIALVAVQAAFGAEWLSLDASKTVIWKD
                     TRRCAPLNSHHEELILSCLYPMLLLFLTAVFSGINWENDENNYECRSILISMGSNVGV
                     WIAWPVLAVVQDLEHRDPIITIANLCCGLSVLFGVFGRKLYMLHLYKADDEAEGPGLR
                     MQDKFCWLSGYLNKVKGQTPPNLSISLCVGIAYIPIVAYNRRSAFNIFGYVRLFPKFQ
                     NGIQVRRTNPSHHLGSVDRDLLGCLSHWTDPST"
     gene            <279399..>284260
                     /locus_tag="CAPTEDRAFT_80444"
     mRNA            join(<279399..279477,283860..284052,284113..>284260)
                     /locus_tag="CAPTEDRAFT_80444"
                     /product="hypothetical protein"
     CDS             join(<279399..279477,283860..284052,284113..>284260)
                     /locus_tag="CAPTEDRAFT_80444"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="ELU07928.1"
                     /db_xref="JGIDB:Capca1_80444"
                     /translation="TILSRETAPLAAEQDMFVNNTEASSTGGLAIAVPGEIAGLYEAW
                     KMFGRVEWAQLIQPTITLCEEGFEVVKSLASAARSYETTIREDPNLAEIFIKEDGELI
                     EEGDIITNEKLGQTMRRIAQDPMSFYTGSLAQDIVDDI"
     assembly_gap    280308..283053
                     /estimated_length=2746
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
CONTIG      join(AMQN01006897.1:1..16274,gap(203),AMQN01006898.1:1..1423,
            gap(50),AMQN01006899.1:1..2491,gap(50),AMQN01006900.1:1..11175,
            gap(2282),AMQN01006901.1:1..3585,gap(50),AMQN01006902.1:1..8031,
            gap(50),AMQN01006903.1:1..5883,gap(54),AMQN01006904.1:1..23532,
            gap(50),AMQN01006905.1:1..25341,gap(50),AMQN01006906.1:1..5193,
            gap(434),AMQN01006907.1:1..1501,gap(12361),AMQN01006908.1:1..1062,
            gap(50),AMQN01006909.1:1..1751,gap(762),AMQN01006910.1:1..2639,
            gap(304),AMQN01006911.1:1..14042,gap(221),AMQN01006912.1:1..23404,
            gap(50),AMQN01006913.1:1..3569,gap(226),AMQN01006914.1:1..30309,
            gap(50),AMQN01006915.1:1..1863,gap(50),AMQN01006916.1:1..1397,
            gap(50),AMQN01006917.1:1..14759,gap(50),AMQN01006918.1:1..17041,
            gap(50),AMQN01006919.1:1..29028,gap(50),AMQN01006920.1:1..17467,
            gap(2746),AMQN01006921.1:1..1397)
//