LOCUS KB031134 23063198 bp DNA linear CON 19-MAR-2015 DEFINITION Pteropus alecto unplaced genomic scaffold scaffold87, whole genome shotgun sequence. ACCESSION KB031134 ALWS01000000 VERSION KB031134.1 DBLINK BioProject: PRJNA171993 BioSample: SAMN01103203 KEYWORDS WGS. SOURCE Pteropus alecto (black flying fox) ORGANISM Pteropus alecto Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus. REFERENCE 1 (bases 1 to 23063198) AUTHORS Zhang,G., Cowled,C., Shi,Z., Huang,Z., Bishop-Lilly,K.A., Fang,X., Wynne,J.W., Xiong,Z., Baker,M.L., Zhao,W., Tachedjian,M., Zhu,Y., Zhou,P., Jiang,X., Ng,J., Yang,L., Wu,L., Xiao,J., Feng,Y., Chen,Y., Sun,X., Zhang,Y., Marsh,G.A., Crameri,G., Broder,C.C., Frey,K.G., Wang,L.F. and Wang,J. TITLE Comparative analysis of bat genomes provides insight into the evolution of flight and immunity JOURNAL Science 339 (6118), 456-460 (2013) PUBMED 23258410 REFERENCE 2 (bases 1 to 23063198) AUTHORS Zhang,G., Cowled,C. and Wang,L. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.06 Genome Coverage :: 110x Sequencing Technology :: Illumina HighSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..23063198 /organism="Pteropus alecto" /mol_type="genomic DNA" /submitter_seqid="scaffold87" /db_xref="taxon:9402" /chromosome="Unknown" /sex="male" /tissue_type="kidney" /geo_loc_name="Australia: Anglican Church Grammer School, East Brisbane" /collection_date="Nov-2008" assembly_gap 24942..24966 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 66453..66735 /estimated_length=283 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 69632..70610 /estimated_length=979 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 73655..73668 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<82493..>142820) /locus_tag="PAL_GLEAN10019236" mRNA complement(join(<82493..82633,84884..85027,86894..86997, 95548..95662,96950..97136,98143..98364,99324..99404, 99506..99568,101978..102046,108280..108395,114970..115215, 123526..123737,126089..126282,128326..128430, 129495..129585,131187..131321,135907..136698, 142709..>142820)) /locus_tag="PAL_GLEAN10019236" /product="Suppression of tumorigenicity protein 18" CDS complement(join(82493..82633,84884..85027,86894..86997, 95548..95662,96950..97136,98143..98364,99324..99404, 99506..99568,101978..102046,108280..108395,114970..115215, 123526..123737,126089..126282,128326..128430, 129495..129585,131187..131321,135907..136698, 142709..142820)) /locus_tag="PAL_GLEAN10019236" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Suppression of tumorigenicity protein 18" /protein_id="ELK02302.1" /db_xref="InterPro:IPR002515" /db_xref="InterPro:IPR013681" /db_xref="UniProtKB/Swiss-Prot:O60284" /translation="MKPRHYSPNTGCNEEHDARVEAEEDGGILETGNHPTTEEIMMKP IDETLHSTAQENSNGKEDRYGCYQELVVKSLMNLGKFEKNASLQTINENLNDSGIQSL KAESDDVDECFMIHSDDGKDKINDSQLRFCSSDDNESNSESAENGWDSGSNFSEETKP HRVAKYILVDSRKDLLEVPEIKTEDDKFIPCENKCDSEPERRDPQNAHIEPLDGKTQP SFSEIEEDDNQCLAAMTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNNYKELDRFL LEHLAGERRQTKVIDMSGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSL SGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMS QDKNQLDSPQTGQGLDQVHRTSLVKQIEFNFRSQTITSPRASASKEQEKFGKVPFDYA SFDAQVFGKRPLVQTGQGQKPPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSY GQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSMKKN RILDKAAPLTSSNTSISTPSSSPFKTSSILVNAAFYQAFCDQEGWDTPINYSKTHGKT EEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITVSGCPLADKTLKSL MAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKC PVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGC NGLGHVNNVFVTHRRNDSHKSSVPNVTVTTQLVHGLSNIHIKTDDKMLPLCYGEHIPQ LATRVIFKNPEEVLNDDTETAPGRQRPFREAVSPATLCLRPSMCQARAKTSSSVIIYG IESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNES LLRELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALL ESIKQAVKGIHV" assembly_gap 119193..119250 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 123284..123398 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 151791..151882 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 162805..162827 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 174656..174748 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 196049..196071 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 212008..212039 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 216909..216927 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 218769..219079 /estimated_length=311 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 239663..239807 /estimated_length=145 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 260305..260898 /estimated_length=594 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 319358..319446 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 321968..321986 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 330884..330933 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 361123..361309 /estimated_length=187 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 407357..407961 /estimated_length=605 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 422642..422703 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 423682..423704 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 464148..464199 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 469799..469867 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<508307..>559612) /locus_tag="PAL_GLEAN10019239" mRNA complement(join(<508307..508440,511374..511510, 524231..524471,524576..524684,527050..527215, 537172..539072,541574..541760,541927..542111, 547670..547840,552184..552610,553910..554112, 556590..556760,556955..557081,559548..>559612)) /locus_tag="PAL_GLEAN10019239" /product="RB1-inducible coiled-coil protein 1" CDS complement(join(508307..508440,511374..511510, 524231..524471,524576..524684,527050..527215, 537172..539072,541574..541760,541927..542111, 547670..547840,552184..552610,553910..554112, 556590..556760,556955..557081,559548..559612)) /locus_tag="PAL_GLEAN10019239" /codon_start=1 /product="RB1-inducible coiled-coil protein 1" /protein_id="ELK02303.1" /db_xref="InterPro:IPR019460" /db_xref="UniProtKB/Swiss-Prot:Q8TDY2" /translation="MLVVSVNVQVRKRLSRDYSFRSVTDLKHAIHSKYKIAIQHQVLV VNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCELPPAIPKTTFSTENDMEIKVEE SLMMPAVFHTVASRTQLAVEMYEVAKKLSSFCESLVHDEHLQHQGWAAIMANLEDCSN SYQKLLFKFENIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRL DSLPEHEGSEKSEMKTSTELVLSPDTPRTTNKSLLTSLHKSVEHVAPDTTDAEGGKEI RESCHSTVQQDETLVDAKEGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDP RIIRPFIVECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCGRLVNEQKELAQGFLA NQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELATNLHVRLK WCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIK HYREASISQTSPQSASSPRIESATGITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDS IDAHTFDFETIPHPNIEQTIHQASLDLDSLAESPESDFMSAVNEFVIEENLSSPNPIS DPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDSGDHVSLNVQLEKCRAVAQDSQF TIQTIKDDLCQFRTFVQKEQCDFSNSLKCTAVEIRNIIEKVKYSLEITLNEKHQKELQ SLKSEYEGRLEALIKEREENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICL QNEKDQKLLEMENVMHTQNCEIKELKESRELVLEDLKKLHVENDEKIQLLRAELQSLE ESHLKELEDTLHVRHTQEFEKVMTDHKVSLEKLKDENQQKVNQIQESHATIIQEKEQQ LQDLKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLDQETENF RTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESNVLKAELNKV TSLHHQAFEIEKSLKEEIVELRSKLDSELSALEKQKDEKITQQEEKYKAIIQKLEKDK EKFIMNQEQDREQLIQKLNCEKEEAIQTALKEFKLDREAVEKELLEKVKHLENQIVKS SAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKKKNEEMQNVRTSLIAEQQTNF NTVLTREKMRKENIINDLNDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVS KLRGSSFVPSAFVATAPELYGACAPELPGETERSAIETQEEGRVDSAMETSMMSVHFQ VGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLQPGEGASGASRRPWVLGKVM EKEYCQAKKVKTTSYDINLGIRRFSYYFI" assembly_gap 579887..579975 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <582197..>713714 /locus_tag="PAL_GLEAN10019240" mRNA join(<582197..582832,713553..>713714) /locus_tag="PAL_GLEAN10019240" /product="hypothetical protein" CDS join(582197..582832,713553..713714) /locus_tag="PAL_GLEAN10019240" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02304.1" /translation="MGEGDTGGDNTYLAAPPSPSGAAAEPATPGTIFRRRLLVGGSYQ PLIRHHQLTQPPVSWCLPRPRTPDGREGSGRRRDVVRPLGSGSGTGGKKATARQSRGA GTTGEPRGSTERSAGQRTRPRLGLLLSTPSLPPRSMPGICGRGRGAPRNPGRAERRSA GPEVDGLPGRRTLSRQSLPAGLPLGCPPLTRGDSAVAACFGASRRPGAYYRKNLKCRN GPLVLRVSSLMIIDCSPRPIATSLLYGREIRTETVDIGMKTGPPERN" assembly_gap 584491..584691 /estimated_length=201 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 605031..605059 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 609662..609833 /estimated_length=172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 650523..650536 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 667090..674768 /estimated_length=7679 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 694475..694548 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 708168..708221 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 719098..719119 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 735533..735789 /estimated_length=257 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 758954..759828 /estimated_length=875 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 791708..791719 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<794067..>794384) /locus_tag="PAL_GLEAN10019242" mRNA complement(<794067..>794384) /locus_tag="PAL_GLEAN10019242" /product="U1 small nuclear ribonucleoprotein A" CDS complement(794067..794384) /locus_tag="PAL_GLEAN10019242" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="U1 small nuclear ribonucleoprotein A" /protein_id="ELK02305.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q06AA4" /translation="MEHKIVIRRKSGGATCQIYSWVALPQHLTPWQKPAPTTQFTSPT SVRKIKKDELKKSLYAIFSQFGQILDILVSRSLKMSGQAFAAFKEVSNTTNALHSLQG FPF" assembly_gap 814000..814036 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 827332..829328 /estimated_length=1997 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 849972..850052 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 866675..868216 /estimated_length=1542 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 904923..905019 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 909000..909132 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 913568..913693 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 946593..946650 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 975616..978766 /estimated_length=3151 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<995108..>1021072) /locus_tag="PAL_GLEAN10019243" mRNA complement(join(<995108..995640,1000243..1000595, 1020816..>1021072)) /locus_tag="PAL_GLEAN10019243" /product="Kappa-type opioid receptor" CDS complement(join(995108..995640,1000243..1000595, 1020816..1021072)) /locus_tag="PAL_GLEAN10019243" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004985 - opioid receptor activity [Evidence IEA]; GO_function: GO:0004987 - kappa-opioid receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Kappa-type opioid receptor" /protein_id="ELK02306.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000452" /db_xref="InterPro:IPR001418" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:P34975" /translation="MESPVQIFRGEPGPTCAPSTCLLPNGSRWFPSWAEPDSNNSAGS EDAPLEPAHISPVIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLA LADALVTTTMPFQSTVYLMNSWPFGDILCKIVISIDYYNMFTSIFTLTMMSVDRYIAV CHPVKALDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDIDVIECSLQFPDDD YSWWDLFMKICVFVFAFVIPVIIIIICYTLMILRLKSVRLLSGSREKDRNLRRITRLV LVVVAVFVICWTPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLD ENFKRCFKDFCFPIKMKMERQSTSRVRNTVQAAAYMRDVDGINKPV" assembly_gap 999209..999288 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1010352..1010602 /estimated_length=251 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1019163..1019744 /estimated_length=582 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1047485..1048087 /estimated_length=603 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1067840..1067885 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1112199..1112266 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1149215..1149272 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1173487..1173498 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1198382..1198412 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1200712..1200751 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1231490..1231502 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1235178..1236129 /estimated_length=952 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1256871..1256900 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1274449..1274630 /estimated_length=182 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1277565..1278496 /estimated_length=932 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1306295..1306740 /estimated_length=446 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1318183..1318225 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1334897..1334929 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1335813..1337853 /estimated_length=2041 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1351948..1351974 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1379049..>1468070) /locus_tag="PAL_GLEAN10019244" mRNA complement(join(<1379049..1379166,1397967..1398068, 1409906..1410031,1412317..1412495,1432381..1432573, 1438547..1438644,1452393..1452497,1454762..1454875, 1457938..1458027,1458975..1459077,1467967..>1468070)) /locus_tag="PAL_GLEAN10019244" /product="V-type proton ATPase subunit H" CDS complement(join(1379049..1379166,1397967..1398068, 1409906..1410031,1412317..1412495,1432381..1432573, 1438547..1438644,1452393..1452497,1454762..1454875, 1457938..1458027,1458975..1459077,1467967..1468070)) /locus_tag="PAL_GLEAN10019244" /note="GO_component: GO:0000221 - vacuolar proton-transporting V-type ATPase, V1 domain [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO_function: GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO_process: GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]" /codon_start=1 /product="V-type proton ATPase subunit H" /protein_id="ELK02307.1" /db_xref="InterPro:IPR004908" /db_xref="InterPro:IPR011987" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q9TVC1" /translation="MDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDC EFIQRFEMKRSPEEKQEMLQNEGSQCAKTFINLMTHISKEQTVQYILTMVDDMLQENH QRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNY YFNWIKTQLSSQSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQL QYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKST ERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEY SSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHD IGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNW" assembly_gap 1386483..1386505 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1391014..1391042 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1402941..1403025 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1414976..1415042 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1425785..1425799 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1436657..1436689 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1439988..1440033 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1441407..1441430 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1444762..1444812 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1463258..1463285 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1522073..>1620589) /locus_tag="PAL_GLEAN10019245" mRNA complement(join(<1522073..1522159,1588114..1588185, 1592497..1592643,1594776..1594911,1595926..1595995, 1597083..1597228,1600313..1600400,1604578..1604683, 1611819..1611881,1620527..>1620589)) /locus_tag="PAL_GLEAN10019245" /product="Transcription elongation factor A protein 1" CDS complement(join(1522073..1522159,1588114..1588185, 1592497..1592643,1594776..1594911,1595926..1595995, 1597083..1597228,1600313..1600400,1604578..1604683, 1611819..1611881,1620527..1620589)) /locus_tag="PAL_GLEAN10019245" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0006350 - transcription [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Transcription elongation factor A protein 1" /protein_id="ELK02308.1" /db_xref="InterPro:IPR001222" /db_xref="InterPro:IPR003617" /db_xref="InterPro:IPR003618" /db_xref="InterPro:IPR017890" /db_xref="InterPro:IPR017923" /db_xref="UniProtKB/Swiss-Prot:P23193" /translation="MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQST RIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAITSQNSPE AREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIA IGADEEELGSQIEEDILCVNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLF ARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQT RSADEPMTTFVVCNECGNRWKTGTIKSEIKPSHIGAPQPVPQGGGQIQG" assembly_gap 1580287..1580437 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1582687..1582715 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1627662..>1649591) /locus_tag="PAL_GLEAN10019247" mRNA complement(join(<1627662..1627715,1630618..1630794, 1631763..1631864,1632824..1632897,1635385..1635455, 1637003..1637050,1638155..1638220,1649365..>1649591)) /locus_tag="PAL_GLEAN10019247" /product="Acyl-protein thioesterase 1" CDS complement(join(1627662..1627715,1630618..1630794, 1631763..1631864,1632824..1632897,1635385..1635455, 1637003..1637050,1638155..1638220,1649365..1649591)) /locus_tag="PAL_GLEAN10019247" /note="GO_function: GO:0016787 - hydrolase activity [Evidence IEA]" /codon_start=1 /product="Acyl-protein thioesterase 1" /protein_id="ELK02309.1" /db_xref="InterPro:IPR003140" /db_xref="UniProtKB/Swiss-Prot:Q5RBR7" /translation="MSAPLSAIVPAAPKATAAVSGSGRGSEGPARPAVGYFPSRRVGI LAGWRPVNWGRSVLPGVIWSGGGPRGPGPSCVHGWAEAFAGIRSSHIKYICPHAPVMP VTLNMNMAMPAWFDIIGLSPESREDEPGIKQAAENVKALIEQEVKNGIPSNRIILGGF SQGGALSLYTALTTQQKLAGVTALSCWLPLRDSFPQGPINGVNRDISILQCHGNCDPL VPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDIKQFIDKLLPPVD" assembly_gap 1649665..1649731 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1649988..1650018 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1661478..1665720 /estimated_length=4243 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1667090..>1672135 /locus_tag="PAL_GLEAN10019248" mRNA join(<1667090..1667197,1668065..1668219,1668791..1668956, 1671219..1671342,1671798..>1672135) /locus_tag="PAL_GLEAN10019248" /product="39S ribosomal protein L15, mitochondrial" CDS join(1667090..1667197,1668065..1668219,1668791..1668956, 1671219..1671342,1671798..1672135) /locus_tag="PAL_GLEAN10019248" /codon_start=1 /product="39S ribosomal protein L15, mitochondrial" /protein_id="ELK02310.1" /db_xref="InterPro:IPR021131" /db_xref="UniProtKB/Swiss-Prot:Q9P015" /translation="MAGPVHGGGAGALDLLRALPRVSLANLKPNPGSRKLERRPRGRR RGRKCGRGHKGERQRGTRPRLGFEGGQTPFYIRIPKYGFNEGHSFRRQYQPLSLNRLQ YLIDLGRVDPTQPIDLTQLVNGRGVTIQPLKRDYGVQLVEEGADTFKAKVNIEVQLAS ELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPIPKRMLPPEALVLYYTDAK NRGYLADPAKFPEARLELAKKYGYILPDITKDELFKMLSTRKDPRQIFFGLAPGWVVN MADKKILKPTDENLLKYYSS" assembly_gap 1699477..1699487 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1710317..1710415 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1732443..1733962 /estimated_length=1520 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1765931..1766600 /estimated_length=670 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1767788..1767972 /estimated_length=185 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1773540..1773557 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1862358..1862451 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1876185..1876205 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1894881..1894912 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1913426..>1915261 /locus_tag="PAL_GLEAN10019250" mRNA join(<1913426..1913732,1914361..1914830,1915013..>1915261) /locus_tag="PAL_GLEAN10019250" /product="Transcription factor SOX-17" CDS join(1913426..1913732,1914361..1914830,1915013..1915261) /locus_tag="PAL_GLEAN10019250" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Transcription factor SOX-17" /protein_id="ELK02311.1" /db_xref="InterPro:IPR000910" /db_xref="InterPro:IPR009071" /db_xref="InterPro:IPR021934" /db_xref="UniProtKB/Swiss-Prot:Q61473" /translation="MSSPDAGYASDDQSQTRSALPSVMAGLGPCPWAESLSPLGDMKV KGEAAASSGAPAGPAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKML GKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHSLA EPQAAALGPDGGRMAMDGLGLPFPDQGFPTGPPLIPPHMGGHYRDCQGLGASPLDGYP LPTPDTSPLDGVEPDPAFFTAPLPGDCPAAGPYSYPQASDYPSPPPEALPCRDGVDPS QPAELLGEVDRTEFEQYLHFVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVY YCNYPDV" assembly_gap 1914852..1915008 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1921479..1921499 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1923770..1923900 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1925923..1925973 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1929075..1929208 /estimated_length=134 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1939932..1939952 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1985422..1985451 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1989768..1989807 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1990933..1990988 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2028628..2028722 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2044383..>2053429 /locus_tag="PAL_GLEAN10019251" mRNA join(<2044383..2044991,2045757..2045928,2047806..>2053429) /locus_tag="PAL_GLEAN10019251" /product="Oxygen-regulated protein 1" CDS join(2044383..2044991,2045757..2045928,2047806..2053429) /locus_tag="PAL_GLEAN10019251" /note="GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]" /codon_start=1 /product="Oxygen-regulated protein 1" /protein_id="ELK02312.1" /db_xref="InterPro:IPR003533" /db_xref="UniProtKB/Swiss-Prot:Q8MJ04" /translation="MSETPSTSFSMIHRSSEGHVPSLRNMRVTHPVVAKRISFYKSGD PQFGGVRVVVNPRSFKTFDALLDNLSRKVPLPFGVRNISTPRGRHSITRLEELEDGES YLCSHGRKVQPVDLDKARQRPRPWHSSRAISAHAHRIPVAAAPGMLCAPRRLVVFRNG DPKARSVVLLSRRVTQSFEAFLQHLTEVMQFRVTKLYATDGRKVPSLQAVILSSGAVV AAGREPFKPGNYDIQKYSLPTRLPGISRRVYSKGNTRTESRKMSTHVPSSPRSQIYSA SSDKMHTNDCSSDHSFAPENYLALEKKDSQNLLIYPSEDDIEKSIIFNQDGTMTVEMK VRFKIKEEETIKWTTSVSRAALSNNDEKSEISSFPGRTDDLSSGLKIAACSLSTDVSP LKKENNQEDSLAEEISIQMTEQEAETCSSPGWENATVDTDIIQGTQDQAKHHFYRPPT PGPRRVRQKKSVIGSVTLVSETKVQEKTIGQFSYSEEREDGKNKSEYHMFTHCCSKMS SVSNKPVLVQIDNNKQIESALERKKESRQLKSSAVSAGVIEITSQKMLEMSHNNGLPQ TTSENLTVEEDTVDSTTLDNKTRIKNLRTYGNTNDRFCPILADASHYLSNSSGTNKTI SEIPTSVGSSTITTRIDGLINEFAQCGLTKLPENEKQILSSVASKKKTKSRQQVINYR HQDVGIATKGMPSKSKRINTRGRIARETILHDSHSPVKGELLCEEDSSDMVIETNCFS KSNFNPMNSKNFHRNTLNSIPNPKVQGLLAKRKPRPLNKVSLRGTTKRENGQGAKVFP HNEFRYCKNTFENQNLFHMFNFLEQNPNAFCGPQAQAEITSWYLRGMAKKSLVNNSHI TLKSQKKQKGDRLKSGTTVGKHRDTTRANSLAFLKKTVFPEDVTHHSVQNYVQRWLEN INPHPTLHSRRSAPICKKETSVVNGFLGNNSRTSSEKGNNFVMESNKHVTKNANLTGD RVGKKVGKSFDKNSSEELNKDLYENQVESLNDAYLLSPHECRTLSQSAIDNHNTKSQV SVEKSGPEISLVYQEINLATKGQSIEAAIQVDPMEEATPKDLLPVLLLRQLQALVPSI HKTQNGVQMPGSLVDVSFPSPINNSSTSVLLAWLLVLNLRGSVNSFCQGDYHKTTNRT SEILALLEVLKHIAITEEADDLKAAVANLVESTTNPFGLTEKEQDMVPIGLSANCSTL NIQSVPKCIENEKTQEISLNGSNFANEDCDPEVFVSKVTCSPCEMCTVSKIYPPKESC NLSDIFSSSDGYTMDQTSMNKACFPGEGCSLTEAVSSHKACAHEENHTYETACPTDEA YVPIKVCNTSDFLNSKENTYTDNLEFTDELEIAEVQKDLNILVDPGYKDGFNILGSHQ NSNLSHCGFFLNEPEFDKERSSLDGFKNCSLKKFQDKNTYTSFDKEESKTSEEPGSTN SVTSSERNISELESFEELEKQDINFFHRDVNAGEQATEELIQKELEASQNLALIEHSS RNITEERKNSVICETTNGRLTAPPSLVFCYDSKKNIEKELNDVETKMRVKMMVKSMEI GSCSESPLDFKNCFKRPVTSGWSDYRQDSKNDQPCKISSDGPNDGREEFTQEKEYIKG LVKRTIEKLYGKVEIVKPSFFPGSTHRSQVSPYNSMDFQCARKISLYDSESQSFVSSG GVSSGSSVLQKFQEERQDKCDFNDVRANYHGGNVEHNTKQNDHNRILRDIEEGVLIDK GKWLLKENHLLRVSTPENSGICGNGDTTSVDTLLDNNSNEVPYSHFGNLAPGPNMAEL SSSELEELTQPLELKCNFNCSDSHCIDSEPFHEDLLDVQNKTCAKEGISNHHAEKGNH RSERVCTSVTHGFTTAANKVHPVSDDTIKNQPLPGNNNIHGALQEGDSLDKLYAICGQ HCPILAVTIQPINEEDRGFAYCKDSDIENSLGLHLWKKIHPCLLQSNKNMFGDENNKA SSKKAYIDNAIDDIFDRLYFNTFDLSKRRKIKRIKFLEEKNNLKKFQFYLKKRFCVNF LHPSLVLGDVNSNTQDPSNQTNEIFEVVDENNNLLNNRFQSSRINLNQPISENINYYF SFEMLGQAYLFGQVETSLNISNRSDLKIFYIFEDENLFIWEEGNELNLTYFESRDEQE DL" gene <2079814..>2171354 /locus_tag="PAL_GLEAN10019252" mRNA join(<2079814..2080005,2084816..2084902,2087477..2087609, 2107351..2107516,2130358..2130434,2130539..2130570, 2130723..2130852,2151752..2151855,2153653..2153829, 2157068..2157280,2171046..>2171354) /locus_tag="PAL_GLEAN10019252" /product="Lipoxygenase like proteiny domain-containing protein 1" CDS join(2079814..2080005,2084816..2084902,2087477..2087609, 2107351..2107516,2130358..2130434,2130539..2130570, 2130723..2130852,2151752..2151855,2153653..2153829, 2157068..2157280,2171046..2171354) /locus_tag="PAL_GLEAN10019252" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008083 - growth factor activity [Evidence IEA]" /codon_start=1 /product="Lipoxygenase like proteiny domain-containing protein 1" /protein_id="ELK02313.1" /db_xref="InterPro:IPR001024" /db_xref="InterPro:IPR002348" /db_xref="InterPro:IPR008976" /db_xref="InterPro:IPR008996" /db_xref="UniProtKB/Swiss-Prot:Q8IVV2" /translation="MLCVTCASVGGNWKVSIVTSDLPNAGTSSQIYITLYGQHRSSAP IYLYGTDRPRFQDGHKDIFTITVGDIGTLFKIRIGHTNSGLSPSWCCKEIQLWNMNSG KQFYIPVQRWMARDQEDGEICREFPVLNKGQPILPVTIYEVHVATGELWNAGTVANVY ISIYGEKGDTGSRQLFRSKNSFSFLRGQVSDEKWLDQEEDDGKIVRELYARDNTIIFA RQKLEHNRKETWAAESWKFMKGNTLQFYNRLTGGFVRLHPDGTIDAIGEKTDKYGFFD VIVSKGNICIFQSHEIRHLSLALDNGCVTGMASGRASTELRVLYQPNRCALLESALVP GHTVIFDRRGKIASESSAGYADLSKEFVVFVKDMFLNSAVILLATSLRQALCLQPDGS CTGVGNQSEKSYWKVHKISSGICMFESVKNARMYLRIKEGQCDGTGTGDIDCHFKIKK NLENASISLESTKSPGLFVGLQSDGQAKPVIYTKNGNVFFYPRVIKCTFTLKYYCHFV LLCDILCLVSDNFTILLLSKFLLLGFLWLLF" assembly_gap 2094137..2094572 /estimated_length=436 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2097247..2098218 /estimated_length=972 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2165497..2165619 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2182151..2182160 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2191063..2191988 /estimated_length=926 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2197187..2197235 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2225087..2225139 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2236848..2237304 /estimated_length=457 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2247745..2247839 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2249503..2251748 /estimated_length=2246 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2278515..2278525 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2329453..2329848 /estimated_length=396 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2335019..2335031 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2341515..2341579 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2410659..2410742 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2424009..2426553 /estimated_length=2545 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2455733..2455770 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2474811..2474832 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2496596..2496615 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2505314..2505437 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2520453..2520588 /estimated_length=136 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2548793..2553284 /estimated_length=4492 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2563301..2563375 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2571402..2571928 /estimated_length=527 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2731346..2731366 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2742988..2743038 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2776352..2776378 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2811760..2811780 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2820831..2820845 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2846522..2846543 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2864764..2864788 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2866666..2866692 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2880058..2886726 /estimated_length=6669 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2892498..2892532 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2936752..2936765 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2945434..2945445 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2965457..2965602 /estimated_length=146 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2975645..2976552 /estimated_length=908 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3017095..3018068 /estimated_length=974 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3022235..>3040725) /locus_tag="PAL_GLEAN10019253" mRNA complement(join(<3022235..3022339,3031143..3031282, 3033079..3033139,3038239..3038432,3040575..>3040725)) /locus_tag="PAL_GLEAN10019253" /product="Transmembrane protein 68" CDS complement(join(3022235..3022339,3031143..3031282, 3033079..3033139,3038239..3038432,3040575..3040725)) /locus_tag="PAL_GLEAN10019253" /note="GO_function: GO:0008415 - acyltransferase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Transmembrane protein 68" /protein_id="ELK02314.1" /db_xref="InterPro:IPR002123" /db_xref="UniProtKB/Swiss-Prot:Q0VCR6" /translation="MEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADH FVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGN RKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKL RTYLGDPIPYDPKVTAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHKKQNIN" assembly_gap 3035623..3035758 /estimated_length=136 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3061871..>3097575 /locus_tag="PAL_GLEAN10019254" mRNA join(<3061871..3061941,3066708..3066772,3068847..3069016, 3069379..3070189,3072266..3072377,3073902..3073988, 3076181..3076355,3078401..3078704,3080771..3080923, 3082516..3082659,3085302..3085540,3086464..3086526, 3097453..>3097575) /locus_tag="PAL_GLEAN10019254" /product="Trimethylguanosine synthase" CDS join(3061871..3061941,3066708..3066772,3068847..3069016, 3069379..3070189,3072266..3072377,3073902..3073988, 3076181..3076355,3078401..3078704,3080771..3080923, 3082516..3082659,3085302..3085540,3086464..3086526, 3097453..3097575) /locus_tag="PAL_GLEAN10019254" /note="GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_process: GO:0001510 - RNA methylation [Evidence IEA]; GO_process: GO:0009452 - RNA capping [Evidence IEA]" /codon_start=1 /product="Trimethylguanosine synthase" /protein_id="ELK02315.1" /db_xref="InterPro:IPR019012" /db_xref="UniProtKB/Swiss-Prot:Q96RS0" /translation="MFLFIEDLEEDCKILCLCSRAFLEDRKLCNLGLKGYYVKGNDSN AGDQTPEEEGGPSHGTAQSCDSKDIGLDESKLDSEAELMRSMGLPLQFGGKSTHKNFE VTMNTRNKVKMKKKKHQKKYLNEIIKESWRQEYEDDILSSDDPSSIEQHENTRTNELQ IKKDIETENLPIENTLTPKLEITEKWEKYWNEYGVGLLWQSWQENHPDQTLCSEPWNV PGTKEEWEQHYSQLYWHYLEQFQYWDAQGWTFDASQSCNTNTCDSKTEVDNEEDENCM KADLLSFPPSLIGSISSSSSDKDHNEMLNGISNLNLNSEKVEQSQLDSSLSSDGHQWL SEVDSKRECPASGQGEPSNGGTKESNVSGNRDTNQPAQDSQESSNTIKERAHPTGIDG EESEDDPPERKPSKLKRSHELDIEENPDSDFDDNGSLLGFKHGSGQKYGGISNFSHRQ VGYLQKNVKYKSKFLDMRRQINMKNKHIFFTEESEKTCFKKSKALSKVEKFLKWVNEP VDEEASQESASHNNIQDTCTSSDSEEQETSVTKDDDPLVTSIPEPKKCYTVASSGELE TEKNGDSIVAAVTDKENCAAQDKPDSLQVETEAEIKKKKKKKKRDKKVVGLPPEIAAV PKLAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSESFKCDIVVDAFC GVGGNCIQFALTGKRVIAIDIDPVKIDLARNNAEVYGIADKIEFICGDFLLLAPDLKA DVVFLSPPWGGPDYATADIFDIRTMMSPDGYPLEVLKLSQKITNNIVYFLPRNADIDQ VASLAGPGGQVEIEQNFLNNKLKTITAYFGDLIRRPASES" assembly_gap 3065561..3065608 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3126486..3126517 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3140059..3140677 /estimated_length=619 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3151565..3151632 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3165847..3165866 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3192082..>3251276 /locus_tag="PAL_GLEAN10019257" mRNA join(<3192082..3192213,3195204..3195249,3196075..3196180, 3197745..3197843,3197966..3198069,3198596..3198745, 3199740..3199892,3210392..3210574,3212719..3212795, 3239752..3239905,3242459..3242590,3251074..>3251276) /locus_tag="PAL_GLEAN10019257" /product="Tyrosine-protein kinase Lyn" CDS join(3192082..3192213,3195204..3195249,3196075..3196180, 3197745..3197843,3197966..3198069,3198596..3198745, 3199740..3199892,3210392..3210574,3212719..3212795, 3239752..3239905,3242459..3242590,3251074..3251276) /locus_tag="PAL_GLEAN10019257" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Tyrosine-protein kinase Lyn" /protein_id="ELK02316.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q07014" /translation="MGCIKSKRKDNLNDDGVDLKTQPVRNTDRTIYVRDPTSNKQQRP VTDSQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFRKGEKMKVLEEHGEWWKA KSLSTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESET LKGSYSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGL CRRLEKACISPKPQKPWDKDAWEISRESIKLVKRLGAGQFGEVWMGYYHNSTKVAVKT LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSD EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVI EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNA DVMTALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQY QQQP" assembly_gap 3192926..3193025 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3270737..3270749 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3276430..>3277563) /locus_tag="PAL_GLEAN10019258" mRNA complement(join(<3276430..3276612,3277016..3277089, 3277354..3277453,3277522..>3277563)) /locus_tag="PAL_GLEAN10019258" /product="40S ribosomal protein S20" CDS complement(join(3276430..3276612,3277016..3277089, 3277354..3277453,3277522..3277563)) /locus_tag="PAL_GLEAN10019258" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="40S ribosomal protein S20" /protein_id="ELK02317.1" /db_xref="InterPro:IPR001848" /db_xref="UniProtKB/Swiss-Prot:P60868" /translation="MSRGAPEMVDEPGKAFKDTGKTPVEPEVAIHRIRITLTSRNVKS LEKVCADLIRGAKDKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLI DLHSPSEIVKQITSISIEPGVEVEVTIADA" assembly_gap 3302602..3303759 /estimated_length=1158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3306840..3308016 /estimated_length=1177 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3311201..3311262 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3316163..3316198 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3321349..>3322398) /locus_tag="PAL_GLEAN10019259" mRNA complement(<3321349..>3322398) /locus_tag="PAL_GLEAN10019259" /product="Proto-oncogene serine/threonine-protein kinase mos" CDS complement(3321349..3322398) /locus_tag="PAL_GLEAN10019259" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Proto-oncogene serine/threonine-protein kinase mos" /protein_id="ELK02318.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P00540" /translation="MPSPLPRRRFLPGEFSPSVDSRPCSSPSELPGKAGKLFPGATPP RAPRLPRRLAWCSIDWEQVCFLQRLGVGGFGSVYRATYHGVPVAIKQVNRCTKNPLAS QRSFWAELNIARLRHDNIVRVVAASTHTPEGFNSLGTIIMEFGGNVTLHQVIYGATSC PEEEEVEPLSCAREQLNLAKCLKYALDVVNGLLFLHSQSIVHLDLKPANILISEQDVC KIGDFGCSEKLEDLLCFQTPPYHLGGTYTHRAPELLKGETVTPKADIYSFAITLWQMT TKEVPYIGERQYVLYAVVAYNLRPSLAAAVFTDSIPGRRLEKIIQGCWRASALQRPSA ERLLVDLTSLKAEFG" assembly_gap 3325204..3325472 /estimated_length=269 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3325482..>3325715 /locus_tag="PAL_GLEAN10019260" mRNA <3325482..>3325715 /locus_tag="PAL_GLEAN10019260" /product="hypothetical protein" CDS 3325482..3325715 /locus_tag="PAL_GLEAN10019260" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02319.1" /translation="MRGFRCPDTQVTGVERLLFKQSEQRHRRLPYSAIAASPARHMAP EASLALESVHVSSGTAVAWAWACAARGAEKHVD" assembly_gap 3331497..3331608 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3338008..3338434 /estimated_length=427 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3367354..>3369371) /locus_tag="PAL_GLEAN10019261" mRNA complement(join(<3367354..3368611,3369130..>3369371)) /locus_tag="PAL_GLEAN10019261" /product="Zinc finger protein PLAG1" CDS complement(join(3367354..3368611,3369130..3369371)) /locus_tag="PAL_GLEAN10019261" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein PLAG1" /protein_id="ELK02320.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q6DJT9" /translation="MATVIPGDLSEVRDTQKVPSGKRKRGETKPRKNFPCQLCDKAFN SVEKLKVHSYSHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFH RKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFE STGVLLEHLKSHAGKSSGGIKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYC AQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPFTCNVSVPIKDELLPVMSLPSSE LLSKPFTNTLQLNLYNTPFQSMQSSGSAHQMITTLPLGMTCPLDMDAVHPSHHLSFKY PFSSTSYAISIPEKEQPLKGEIESYLMELQGGAPSSSQDSQASSSKLGLDPQIGSLDD STGDVSLSKSSISISDPLNTPALDFSQLFNFIPLNGPSYNPISVGSLGMSYSQEEAHS SVSQLPSQTQDLQEPANSVGLGSLHSLSAAFTSGLSTSTTLPRFHQAFQ" gene complement(<3369378..>3482243) /locus_tag="PAL_GLEAN10019262" mRNA complement(join(<3369378..3369488,3379750..3379854, 3380204..3380344,3473390..3473468,3475439..3475515, 3479323..3479454,3482157..>3482243)) /locus_tag="PAL_GLEAN10019262" /product="Epidermal retinal dehydrogenase 2" CDS complement(join(3369378..3369488,3379750..3379854, 3380204..3380344,3473390..3473468,3475439..3475515, 3479323..3479454,3482157..3482243)) /locus_tag="PAL_GLEAN10019262" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Epidermal retinal dehydrogenase 2" /protein_id="ELK02321.1" /db_xref="InterPro:IPR002198" /db_xref="UniProtKB/Swiss-Prot:Q8N3Y7" /translation="MALDAGAMRAYAYTCDCSRKEEVYRVADQVKKEVGDVSILINNA GIETGKNFLDCPDELMEKSFDMNFKAHLWKKGGIKTTIMCPLLIKTGVFEGCTTNCPS LLPILETEYAVRKIVDAVLQEKLGASGLRPSCEEVAQGTPSSGRVSPSAVVQSEIHTS KGFSENSVTEKMVASWCCIGRIWHPECFILSWSINKITLLEFGAGPQSLFAFFYDHMK LEKPPKAKSFSGVGQFPSVQQEGLV" assembly_gap 3388627..3388643 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3406819..3407201 /estimated_length=383 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3424030..3424214 /estimated_length=185 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3432000..3432326 /estimated_length=327 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3445846..3449998 /estimated_length=4153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3455584..3459671 /estimated_length=4088 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3463324..3463374 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3464377..3464621 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3469752..3469861 /estimated_length=110 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3490086..3490127 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3508529..>3515558) /locus_tag="PAL_GLEAN10019264" mRNA complement(join(<3508529..3508677,3509120..3509219, 3513646..3513777,3515391..>3515558)) /locus_tag="PAL_GLEAN10019264" /product="Short chain dehydrogenase/reductase family 16C member 6" CDS complement(join(3508529..3508677,3509120..3509219, 3513646..3513777,3515391..3515558)) /locus_tag="PAL_GLEAN10019264" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Short chain dehydrogenase/reductase family 16C member 6" /protein_id="ELK02322.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="UniProtKB/Swiss-Prot:Q05A13" /translation="MAIIFASLGATVVLWDINEEDNMETCRLAKEKGGVQVFAYKCDC SNRQEIYRVADQVKKEVGDVTILINNAGIVVGKLFLDIPDEMVEKSFLVNVLSHFWTY KAFLPAMIKANHGHLVCISSVAGLIGVSGLTEYSSTKFAAFGLTEALLFELKMINKSK INTTIVCPLFMNTGMFNGVTIK" gene complement(<3518344..>3550378) /locus_tag="PAL_GLEAN10019265" mRNA complement(join(<3518344..3518555,3518736..3518814, 3527732..3527978,3540762..3540888,3546484..3547081, 3550241..>3550378)) /locus_tag="PAL_GLEAN10019265" /product="Proenkephalin-A" CDS complement(join(3518344..3518555,3518736..3518814, 3527732..3527978,3540762..3540888,3546484..3547081, 3550241..3550378)) /locus_tag="PAL_GLEAN10019265" /note="GO_function: GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO_process: GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO_process: GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]" /codon_start=1 /product="Proenkephalin-A" /protein_id="ELK02323.1" /db_xref="InterPro:IPR000703" /db_xref="InterPro:IPR001054" /db_xref="InterPro:IPR006024" /db_xref="UniProtKB/Swiss-Prot:P47969" /translation="MARFLRLCTWLLALGPGLLATVQAECSQDCATCSYRLARPTDIN PLACTLECEGKLPSLKTWETCRELLQLSKLELPQGGASTLRESSKQEESHLLAKKYGG FMKRYGGFMKKMDELYPLEPEEEANEGEIFAKRYGGFMKKDVEEDDGLGNSSDLLKEL LGTGDNRESSHHQEGSDDQEVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGR PEWWMDYQKRYGGFLKRFADSLPSDEEEYPGRAFGRAALPNRVPFSLLGLSAGSLGLA DLAIPPGPSSASCTVVEHNQEPKRQHAHVGSMVKFAFALVVKPNAISKHSFNDFRLRV GVNHGPVIAGVIGAQKPQYDIWGKARNVARGTHSTVLLAAYRTCVCFDSERTHASDKL AISAAGRGEEVVKKTREKIKEEPRETGPWAQLGPVNAQIWPCDRVLRLSAAQEKGGTQ IDSCANPSPKTSSAIS" assembly_gap 3529981..3530018 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3557404..3558647 /estimated_length=1244 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3560915..3560973 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3574935..3574961 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3608581..3608600 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3615904..3615970 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3650458..3650478 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3668578..3670895 /estimated_length=2318 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3697466..3697804 /estimated_length=339 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3703997..3704047 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3753759..3753777 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3756291..3756399 /estimated_length=109 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3765441..3765470 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3773952..3773976 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3857050..3857091 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3859358..3859379 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3860721..3860759 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3864671..3864728 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3871013..3871071 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3902326..3902425 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3940328..3940421 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3940670..>3964817) /locus_tag="PAL_GLEAN10019266" mRNA complement(join(<3940670..3940941,3942442..3942603, 3950090..3950185,3951515..3951677,3964626..>3964817)) /locus_tag="PAL_GLEAN10019266" /product="Inositol monophosphatase 3" CDS complement(join(3940670..3940941,3942442..3942603, 3950090..3950185,3951515..3951677,3964626..3964817)) /locus_tag="PAL_GLEAN10019266" /note="GO_function: GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA]" /codon_start=1 /product="Inositol monophosphatase 3" /protein_id="ELK02324.1" /db_xref="InterPro:IPR000760" /db_xref="UniProtKB/Swiss-Prot:Q2KJ53" /translation="MLAVSVLAAVRGGDEVRRVRESNVLHEKSKGKTREGADDKMTSG DVLSNRKMFYLLKTAFPNVQINTEEHVDASDQEIILWDHKIPEDILKEIATPKEVPAE SVTVWIDPLDATQEYTEDLRKYVTTMVCVAVNGKPVLGVIHKPFSEYTAWAMVDGGSN VKARTYYNEKTPRIVVSRSHSGMVKQVALQTFGNQTTIIPAGGAGYKVLALLDVPDKS QEKADLYIHVTYIKKWDICAGNAILKALGGHMTTLSGEEISYTGSDGIEGGLLASIRM NHQALVRKLPDLEKTGHK" assembly_gap 3946050..3946083 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3964854..3965281 /estimated_length=428 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3979027..3979061 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3991652..3991684 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3998056..3998084 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3998702..3998738 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4010008..4010112 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4023104..4023156 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4097444..4097501 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4100133..4100177 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4125499..4125541 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4171848..4172831 /estimated_length=984 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4184616..4184710 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4197159..4197392 /estimated_length=234 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4224663..4226026 /estimated_length=1364 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4252619..4252722 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4259751..4259777 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4284767..4284784 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4289741..4289851 /estimated_length=111 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4306134..4306216 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4307480..4307489 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4329179..4329257 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4346424..4346440 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4347477..4347495 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4369662..4369735 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4370174..4370592 /estimated_length=419 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4372911..4372940 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4381856..4381984 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4416479..4416600 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4445030..4445501 /estimated_length=472 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4452106..4452131 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4461412..4461481 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4473239..4473389 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4494090..4494134 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4496619..4496637 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4572478..4573044 /estimated_length=567 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4580314..4580375 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4580793..>4581905 /locus_tag="PAL_GLEAN10019267" mRNA <4580793..>4581905 /locus_tag="PAL_GLEAN10019267" /product="Protein FAM110B" CDS 4580793..4581905 /locus_tag="PAL_GLEAN10019267" /codon_start=1 /product="Protein FAM110B" /protein_id="ELK02325.1" /db_xref="UniProtKB/Swiss-Prot:Q5R5R3" /translation="MPTETLQTGSMVKPVSPAGTFTSAVPLRILNKGPDYFRRQAEPN PKRLSAVERLEADKAKYVKSQEVINAKQEPVKPAVLAKPPVCPGAKRALGSPTLKVFG PHAKTESGVQRETLKLEILKNIINSSEGSSTGSGHKHSSRNWPQHRPDATDLHRHSFA ESLKVYPTQGRGSPQESGSHVGRRLLEQTAESFLHVSHSSSDIRKVTSVKPLKAIPCS SSAPPLPPKPKVAAIATMKSPEADPVEPACGVSRRPSLQRSKSDLSDRYFRVDADVER FFNYCGLDPEELENLGMENFARANSDIISLNFRSASMISSDCEQSQDSNSDLRNDDSA NDRVPYGISAIERNARIIKWLYSIKQARESQKVSHV" assembly_gap 4594225..4594257 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4662145..4662248 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4680012..4680026 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4691631..4692684 /estimated_length=1054 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4705710..4705829 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4756016..>4778693 /locus_tag="PAL_GLEAN10019268" mRNA join(<4756016..4756102,4761235..4761338,4767075..4767225, 4769453..4769536,4770361..4770470,4773039..4773176, 4777402..4777563,4778531..>4778693) /locus_tag="PAL_GLEAN10019268" /product="UBX domain-containing protein 2B" CDS join(4756016..4756102,4761235..4761338,4767075..4767225, 4769453..4769536,4770361..4770470,4773039..4773176, 4777402..4777563,4778531..4778693) /locus_tag="PAL_GLEAN10019268" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="UBX domain-containing protein 2B" /protein_id="ELK02326.1" /db_xref="InterPro:IPR001012" /db_xref="InterPro:IPR012989" /db_xref="UniProtKB/Swiss-Prot:Q14CS0" /translation="MAEGGGAADPGEQDRRSSGPRPPSARDLQLALAELYEDEVKCKS SKPDRPDVTVFKSPRTPPQRFCSREREYSGLHIVRPSTGKIVNELFKEAREHGAVPLN EATRASGDDKSKSFTGGGYRLGNSFCKRSEYIYGENQLQDVQILLKLWSNGFSLDDGE LRPYSDPTNAQFLESVKRGEIPLELQRLVHGGQVNLDMEDHQDQEYIKPRLRFKAFSG EGQKLGSLTPEIVSTPSSPEEEDKSIFNAVVLIDDSVPTTKIQIRLADGSRLIQRFNS THRILDVRDFIVQSRPEFAALDFILVTSFPNKELTDESLTLQEADILNTVLLQQLK" assembly_gap 4758011..4758031 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4786388..4786430 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4800174..4801156 /estimated_length=983 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4807328..4807414 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4809442..4809457 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4811938..>4816206) /locus_tag="PAL_GLEAN10019269" mRNA complement(join(<4811938..4812237,4812796..4812971, 4814327..4814457,4814628..4815205,4816099..>4816206)) /locus_tag="PAL_GLEAN10019269" /product="Cholesterol 7-alpha-monooxygenase" CDS complement(join(4811938..4812237,4812796..4812971, 4814327..4814457,4814628..4815205,4816099..4816206)) /locus_tag="PAL_GLEAN10019269" /note="GO_function: GO:0004497 - monooxygenase activity [Evidence IEA]; GO_function: GO:0005506 - iron ion binding [Evidence IEA]; GO_function: GO:0009055 - electron carrier activity [Evidence IEA]; GO_function: GO:0020037 - heme binding [Evidence IEA]" /codon_start=1 /product="Cholesterol 7-alpha-monooxygenase" /protein_id="ELK02327.1" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002403" /db_xref="UniProtKB/Swiss-Prot:P22680" /translation="MGNYVHFITNPLSYQKVLCHGKYLDWKKFHFTTSAKAFGHRTID PSDGNTTEKISKAFVKTLQGDALNSLTEAMMKNLQLVMRPPVVPESKMPAWVTEGMYS FCYRVMFEAGYLTLFGQDLTGQDEQKTLILNNLDNFKQFDKIFPALVAGLPIHMFKSA HHAREKLADSLRHENLGKRDHLSELVRFLNDMLSTSDDMENAKMQLAVLWASQANTIP ATFWSLFQMIRSPEAMKAATEEVNKTLENAGQKISFEGNPICLNSMQLNDMPVLDSII KESLRLSSASLNIRTAKEDFTLHLQDGSYHIRKDDIIALYPQLMHLDPEIYPDPLTFK YDRYLDENGKAKTTFYSNGLKLKYCYMPFGSGATICPGRLFAVQEIKQFLILMLFYFE LELVESRVKCPPLDQSRAGLGILPPLNDIKFKYKFKHL" assembly_gap 4834679..4837059 /estimated_length=2381 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4845096..4845166 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4869216..>4886266 /locus_tag="PAL_GLEAN10019270" mRNA join(<4869216..4869266,4869589..4869654,4873880..4873958, 4875138..4875247,4880570..4880731,4882939..4883114, 4884106..4884277,4885022..4885113,4886212..>4886266) /locus_tag="PAL_GLEAN10019270" /product="Syntenin-1" CDS join(4869216..4869266,4869589..4869654,4873880..4873958, 4875138..4875247,4880570..4880731,4882939..4883114, 4884106..4884277,4885022..4885113,4886212..4886266) /locus_tag="PAL_GLEAN10019270" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Syntenin-1" /protein_id="ELK02328.1" /db_xref="InterPro:IPR001478" /db_xref="UniProtKB/Swiss-Prot:O00560" /translation="MSLYPSLEDLKVDKVIQKNSAKMSLYPSLEDLKVDKVIQAQSAF SANPANSAILSEASAPISQDGNLYPKLYPELSQYMGLSLNEEEIHANMAMIPGASTQG QLVARPSSMNYMVAPVTGNDVGIRRAEIKQGIREVILCKDQDGKIGLRLKSVDNGIFV QLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFE RTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQV ADILSTSGTVVTITIMPAFIFEHIIKRMAPSIMKSLMDHTIPEV" gene complement(<4888641..>4942982) /locus_tag="PAL_GLEAN10019271" mRNA complement(join(<4888641..4888735,4889905..4890014, 4890150..4890252,4890700..4890850,4892932..4893015, 4893936..4894059,4894492..4894559,4895332..4895399, 4897964..4898022,4899433..4899532,4900944..4901107, 4901420..4901462,4902234..4902365,4902758..4902878, 4903222..4903273,4904251..4904314,4904418..4904508, 4905034..4905113,4906225..4906401,4908507..4908615, 4910097..4910168,4911823..4911952,4917153..4917205, 4917312..4917359,4917665..4917736,4920389..4920439, 4924472..4924508,4924589..4924656,4924748..4924826, 4929204..4929293,4933413..4933447,4942791..>4942982)) /locus_tag="PAL_GLEAN10019271" /product="Protein FAN" CDS complement(join(4888641..4888735,4889905..4890014, 4890150..4890252,4890700..4890850,4892932..4893015, 4893936..4894059,4894492..4894559,4895332..4895399, 4897964..4898022,4899433..4899532,4900944..4901107, 4901420..4901462,4902234..4902365,4902758..4902878, 4903222..4903273,4904251..4904314,4904418..4904508, 4905034..4905113,4906225..4906401,4908507..4908615, 4910097..4910168,4911823..4911952,4917153..4917205, 4917312..4917359,4917665..4917736,4920389..4920439, 4924472..4924508,4924589..4924656,4924748..4924826, 4929204..4929293,4933413..4933447,4942791..4942982)) /locus_tag="PAL_GLEAN10019271" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Protein FAN" /protein_id="ELK02329.1" /db_xref="InterPro:IPR000409" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR004182" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="UniProtKB/Swiss-Prot:Q92636" /translation="MLHITAPFFPANFFRHKAQALLGREEGRKKGLVLKKGNVSPNVF YQAVDLIVSVIEGLESTGILRAFYAYKNSWLRFSLLLLNLEEYYFEQHTAHHIQHKGG QNERKIRGSLKICSKSVIFEPDAISQPIIKIPLRDCIKIGKHGENGASRHFAKAKSGE ISLSFSQVYFIKEHNIVAPYKIERGKMEYVFELDVSGKVEDVVETLLQLHRASCLDKL GDQTAMITAILQSRLARTSFDKNRFQSVSEELHMECQAEMVTPLVTNPGHVCITDTNL YFQPLNGYPKPVVQITLQDVRRIYKRRHGLMPLGLEVFCTEDDLCSDIYLKFYDPQDR DELYFYIATYLEHHVAERTAESYTLQWQRGHLSNYQYLLHLNNLADRSCNDLSQYPVF PWVISDYCSSELDLSNPGTFRDLSKPIGALNKERLERLLTRYQEMPEPRFMYGSHYSS PGYVLFYLVRIAPEYMLCLQNGRFDNADRMFNSIAETWKNCLDGATDFKELIPEFYGD DVSFLVNSLKLNLGKRQGGQMVDDVELPPWAWSPEDFLQKSKDALESNYVSEHLHEWI DLIFGYKQKGSEAVEAHNVFHPLTYEGGVDLNSIEDPDEKVAMLTQILEFGQTPKQLF AIPHPRRITPKFKSSPQTFSCNASIADSPGEESFEDLTEESKTLAWNNIAKLQSYEQY KIHKEAVTGIAVSCNGSSVFTTSQDSTLKMFSKESKMLQRSISFSNMALSSCLLLPGD ATVISSSWDNNVYFYSIAFGRRQDTLMGHDDAVSKICWHDNRLYSASWDSTVKVWSGV PAEMTGTKRHQFDMLAELEHDVGVDTISLNAASTLLVSGTKEGTVNIWDLTAATMLHQ IPCHSGTVCDTAFSPDSRHVLSTGEDGCLNVIDVQTGMLISSMTSDKPQRCFIWDGNT VLSGSQSGELLVWDLLRGKLSERIQGHTGAVTCIWMNEQCSSIITGGEDRQIMFWKLQ Y" assembly_gap 4943179..4944996 /estimated_length=1818 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4949848..4949862 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4968601..4968624 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4995397..4995425 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5030114..5030142 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5041919..>5175988) /locus_tag="PAL_GLEAN10019272" mRNA complement(join(<5041919..5042074,5048464..5048850, 5060646..5060726,5071538..5071768,5083617..5083898, 5159276..5159518,5175938..>5175988)) /locus_tag="PAL_GLEAN10019272" /product="Thymocyte selection-associated high mobility group box protein TOX" CDS complement(join(5041919..5042074,5048464..5048850, 5060646..5060726,5071538..5071768,5083617..5083898, 5159276..5159518,5175938..5175988)) /locus_tag="PAL_GLEAN10019272" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Thymocyte selection-associated high mobility group box protein TOX" /protein_id="ELK02330.1" /db_xref="InterPro:IPR000135" /db_xref="InterPro:IPR000910" /db_xref="InterPro:IPR009071" /db_xref="UniProtKB/Swiss-Prot:O94900" /translation="MYMSMTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSL VHLNEVETGYHSLCHPMNHNGLLPFHPQNMDLPEITVSNMLGQDGALLTNSISVMQDI RNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMQHGQLTTINQSQLSAQLGLNMGGSS VPHNSPSPPGSKSATPSPSSSVHEDEGDETSKVNGGEKRPASDMGKKPKTPKKKKKKD PNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTE AAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALYLSS HYHQQPGMNPHLTAMHPSLPRSIAPKPNNQMPVTVSIANMAVSPPPPLQISPPLHQHL NMQQHQPLTMQQPLGNQLPMQVQSALHSPTMQQGFTLPPDYQTIINPTSTAAQVVTQA MEYVRSGCRNPPAQPVDWNSDYCSSG" assembly_gap 5056946..5057159 /estimated_length=214 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5063320..5063329 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5098567..5098578 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5172697..5172901 /estimated_length=205 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5233040..5233061 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5239437..5239481 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5320588..5320947 /estimated_length=360 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5321388..5321460 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5328088..5328135 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5340012..5340021 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5383720..5383931 /estimated_length=212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5388465..5388508 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5404169..5404662 /estimated_length=494 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5445555..5445579 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5489366..5489413 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5506457..5506647 /estimated_length=191 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5588214..5588239 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5591614..5591629 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5626132..5626230 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5662084..5662144 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5669212..5669282 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5696187..5696219 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5706210..5706228 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5732681..5733831 /estimated_length=1151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5752627..5752706 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5766920..5766970 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5785779..5785820 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5796126..5796155 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5829601..5829650 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5926052..5926168 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5942492..5945208 /estimated_length=2717 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5952380..5952404 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5955545..5955595 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5959581..5959629 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5965667..5965684 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5967319..5967366 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5989139..5989210 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6082474..>6155726) /locus_tag="PAL_GLEAN10019274" mRNA complement(join(<6082474..6082608,6095427..6095539, 6097197..6097245,6099294..6099356,6111608..6111703, 6119300..6119349,6124654..6124762,6142832..6142956, 6154289..6154480,6155624..>6155726)) /locus_tag="PAL_GLEAN10019274" /product="Carbonic anhydrase-related protein" CDS complement(join(6082474..6082608,6095427..6095539, 6097197..6097245,6099294..6099356,6111608..6111703, 6119300..6119349,6124654..6124762,6142832..6142956, 6154289..6154480,6155624..6155726)) /locus_tag="PAL_GLEAN10019274" /codon_start=1 /product="Carbonic anhydrase-related protein" /protein_id="ELK02331.1" /db_xref="InterPro:IPR001148" /db_xref="UniProtKB/Swiss-Prot:P28651" /translation="MADLSFIEDSVAFPEKEEDEEEEEEEGVEWGYEEGVEWGLVFPD ANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTNDGHSIQVILKSKSVLSG GPLPQGHEFELYEVRFHWGRENQRGSEHTVNFKAFPMELTFFDPSCFGTSSTSVNESD ILPCHGIEKKLGLDVLVLSECSGNDYLEFNIEWLHLIHWNSTLFGSIDEAVGKPHGIA IIALFVQIGKEHVGLKAVTEILQDIQYKGKSKTIPCFNPNTLLPDPLLRDYWVYEGSL TIPPCSEGVTWILFRYPLTISQLQIEEFRRLRTHVKGAELVEGCDGILGDNFRPTQPL SDRVIRAAFQ" assembly_gap 6166514..6166787 /estimated_length=274 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6172122..6172165 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6187848..6187893 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6198686..6198790 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6247356..6247375 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6284054..6284702 /estimated_length=649 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6284841..>6342237 /locus_tag="PAL_GLEAN10019275" mRNA join(<6284841..6284976,6314256..6314327,6322524..6322591, 6330369..6330451,6330889..6330981,6342015..>6342237) /locus_tag="PAL_GLEAN10019275" /product="Ras-related protein Rab-2A" CDS join(6284841..6284976,6314256..6314327,6322524..6322591, 6330369..6330451,6330889..6330981,6342015..6342237) /locus_tag="PAL_GLEAN10019275" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0006913 - nucleocytoplasmic transport [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="Ras-related protein Rab-2A" /protein_id="ELK02332.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002041" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR013753" /db_xref="InterPro:IPR020851" /db_xref="UniProtKB/Swiss-Prot:Q90965" /translation="MTGGGLPAQGRQGQVQTIAIRRLGSITLGLFAAPVDEKGRQRRA EGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSIT RSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVK KEEGEAFAREHGLIFMETSAKTASNVEEVNKRTFSMFIIFLLNRIIFYTLIFIYWCIF HNLFNH" assembly_gap 6334422..6335769 /estimated_length=1348 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6354554..6354578 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6370652..6370700 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6379414..6379636 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6388924..6388939 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6404205..6404277 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6412323..6413727 /estimated_length=1405 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6414283..6414404 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6430264..6430281 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6460736..6460781 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6470066..6470236 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6470749..>6586821 /locus_tag="PAL_GLEAN10019276" mRNA join(<6470749..6472395,6509687..6510117,6523401..6523542, 6528506..6528643,6529669..6529734,6535477..6535532, 6540963..6541077,6544272..6544355,6545555..6545692, 6545789..6545910,6546270..6546513,6547587..6547763, 6551844..6551987,6552306..6552561,6558034..6558244, 6558769..6558964,6559265..6559432,6559673..6559852, 6562714..6562824,6562914..6563119,6566040..6566239, 6566423..6566582,6570828..6570917,6571397..6571500, 6572840..6572969,6573368..6573440,6573598..6573655, 6574306..6574534,6574751..6574959,6575254..6575832, 6576687..6576847,6577850..6577945,6578905..6579132, 6579337..6579780,6582881..6583102,6584167..6584307, 6584510..6584637,6585957..>6586821) /locus_tag="PAL_GLEAN10019276" /product="Chromodomain-helicase-DNA-binding protein 7" CDS join(6470749..6472395,6509687..6510117,6523401..6523542, 6528506..6528643,6529669..6529734,6535477..6535532, 6540963..6541077,6544272..6544355,6545555..6545692, 6545789..6545910,6546270..6546513,6547587..6547763, 6551844..6551987,6552306..6552561,6558034..6558244, 6558769..6558964,6559265..6559432,6559673..6559852, 6562714..6562824,6562914..6563119,6566040..6566239, 6566423..6566582,6570828..6570917,6571397..6571500, 6572840..6572969,6573368..6573440,6573598..6573655, 6574306..6574534,6574751..6574959,6575254..6575832, 6576687..6576847,6577850..6577945,6578905..6579132, 6579337..6579780,6582881..6583102,6584167..6584307, 6584510..6584637,6585957..6586821) /locus_tag="PAL_GLEAN10019276" /note="GO_component: GO:0000785 - chromatin [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003682 - chromatin binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]; GO_process: GO:0006333 - chromatin assembly or disassembly [Evidence IEA]" /codon_start=1 /product="Chromodomain-helicase-DNA-binding protein 7" /protein_id="ELK02333.1" /db_xref="InterPro:IPR000330" /db_xref="InterPro:IPR000953" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR006576" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="InterPro:IPR016197" /db_xref="UniProtKB/Swiss-Prot:Q9P2D1" /translation="MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPID QGFASLQPSLHHPSTNQNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSSAPGNGLASPH SQYHTPPVPQVPHGGSGGGQMAVYPGIQNERHGQSFVDSGSMWGPRAVQVPDQIRAPY QQQQQPPAPSGPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLNQG NPFIATSGPGHLSHVPAQSPGMAPSLRHSVQQFRHPPTALHGESVAHSPRFSPNPPQQ GAVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPM NQSVPRYPNAVGFPSNSGQGLMHQQPIHPSGSINQMNTQTMHPSQPQGTYASPPPMSP MKAMSNPAGTPPPQVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQ QSRPFMGMSSASRELAGHMRPNGCPGVGLADPQAIQDRLLPGQQHPGQQPSFQQLPTC PPMQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVPQHSPSEPFLEKPVPDMTQ VSGPNAQLVKSDDYLPSIEQQPQQKKKKKKNNHIVAEDPSKSFGKDDFPGGVDNPELN RNSLDGSQEEKKKKKRPKAKKDPKEPKEPKEKKEPKEPKTPRTPKIPKEPKERKAKTA TPKPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQ KRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQSEQQESVDAEGPVVEK IMSSRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRYKAK QGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWEL RQDIDQAKIEEFEKLLSREPETERVERPPADDWKKSESSREYKNNNKLREYQLEGVNW LLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFR TWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPEL RNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLE PSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVEL TNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEE FKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYL IQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIF DSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM SGRDSAANGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITI ESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRV RKQTRLYSAVKEDELMEFSDLESDSEEKPSVKPRRPQDRAQGYARSECFRVEKNLLVY GWGRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADG QTRALVNHSGLSAPVPRGRKGKKVKAQSAHPVVQDADWLAGCNPDALFQEDSYKKHLK HHCNKVLLRVRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPLHAEVPTDWWDKEA DKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEF DREDEDPEYKPTRTPFKDEIDEFANSPPEDKDESMDMRATGKHSESNAELGQLYWPNT STLTTRLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQ KWTRREEADFYRVVSTFGVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMC RRVCRMPAKPDDEQVLHHPQLAERLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVSR TDYHILNDPELSFLDAHKNFAQNRGAGAISSLNPLAVGFGQVPAVISSAHVQDEKGTG QTEGKVEESENAAAQDKPEGKEEEEETAGGEKDRKQDREAEAGAVKNELKAAEVSADT GPKSVSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETRD GFYMEDGDPSVAQLLHERTFAFSFWPKNFRIQGNFCIGKPSRLRSGEGGLLIHLVQYN ADRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLIPGYTPPAADSPLQKRSFAELSMV GQAGISASEDLTSSPQLSKDDALNLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQL RESQVVSENGQEKVVDLSKASREATSSTSNFSSLTSKFILPSVSTPVSDAFKTQMELL QAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEGLDLLFMSHKRTSLSAEDAEVTK AFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLVGDEAPKNKDLVEWLKLHPAY TVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNKRNGKKMG GAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSVSTNSACLGEGASRRGRRPKSEIAR AAAAAAAVASTSGINPLLVNSLFAGMDLTSLQSLQNLQSLQLAGLMGFPPGLATAATA GGDAKNPAAVLPLMLPGMAGLPSVFGLGGLLNSPLSAATGNTTAASSQGEPEDGTSKG EEKGNENEEENKDSEKSTDAVSATDSANGSVGAATAPAGLPSSPLTFNPFLLSTMAPG LFYPSMFLPPGLGGLTLPGFPTLAGLQNAVGSSEEKAPDKAEGGTFQEEENLEGSDAE ETLDKTAESSILEDEIAQGEELDSLEGGDEIENNENDE" assembly_gap 6474523..6474597 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6499748..6500181 /estimated_length=434 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6505635..6507317 /estimated_length=1683 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6511082..6511219 /estimated_length=138 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6512311..6512351 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6547299..6547386 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6575123..6575241 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6585512..6585947 /estimated_length=436 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6604986..6606025 /estimated_length=1040 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6642720..6642770 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6647296..6647376 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6666044..6666075 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6667937..6668067 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6675345..6675388 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6680907..6680917 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6684335..6684695 /estimated_length=361 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6723536..6738443 /estimated_length=14908 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6794056..6794183 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6842906..6842924 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6856167..6856262 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6857341..6857365 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6866857..6866868 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6875972..6875992 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6897589..6897646 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6914556..>7036342 /locus_tag="PAL_GLEAN10019278" mRNA join(<6914556..6914630,6917247..6917668,6967486..6967660, 7015330..7015440,7018322..7018557,7036255..>7036342) /locus_tag="PAL_GLEAN10019278" /product="Retinaldehyde-binding protein 1-like protein 1" CDS join(6914556..6914630,6917247..6917668,6967486..6967660, 7015330..7015440,7018322..7018557,7036255..7036342) /locus_tag="PAL_GLEAN10019278" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Retinaldehyde-binding protein 1-like protein 1" /protein_id="ELK02334.1" /db_xref="InterPro:IPR001071" /db_xref="InterPro:IPR001251" /db_xref="InterPro:IPR008273" /db_xref="InterPro:IPR011074" /db_xref="UniProtKB/Swiss-Prot:Q8IUQ0" /translation="MRSGNKRLSVAAWLVGESGETDRDQKLSNWKGDLAKMTHLQAGL SPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQA DAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLFAA NWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKL AIEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLI HPEFLPSEFGGTLPPYDMGTWARTLLGPDYSDENDYTHTSYNAMHVKHTSSNLERECS PKPMKRSQSVVEAGTLKHEEKGENENTQPLLALD" assembly_gap 6915226..6915235 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6977389..6977420 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7026714..7026794 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7028697..7029615 /estimated_length=919 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7040164..>7163853) /locus_tag="PAL_GLEAN10019279" mRNA complement(join(<7040164..7040314,7051161..7051294, 7051664..7051755,7055120..7055255,7073974..7074111, 7076901..7077030,7077525..7077664,7079273..7079362, 7081441..7081539,7087020..7087156,7089640..7089790, 7096208..7096294,7101358..7101443,7145217..7145261, 7147338..7147370,7147765..7147803,7152360..7152392, 7152842..7152892,7153287..7153343,7154300..7154332, 7156298..7156417,7160081..7160155,7162943..7163035, 7163781..>7163853)) /locus_tag="PAL_GLEAN10019279" /product="Aspartyl/asparaginyl beta-hydroxylase" CDS complement(join(7040164..7040314,7051161..7051294, 7051664..7051755,7055120..7055255,7073974..7074111, 7076901..7077030,7077525..7077664,7079273..7079362, 7081441..7081539,7087020..7087156,7089640..7089790, 7096208..7096294,7101358..7101443,7145217..7145261, 7147338..7147370,7147765..7147803,7152360..7152392, 7152842..7152892,7153287..7153343,7154300..7154332, 7156298..7156417,7160081..7160155,7162943..7163035, 7163781..7163853)) /locus_tag="PAL_GLEAN10019279" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEA]; GO_function: GO:0004597 - peptide-aspartate beta-dioxygenase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0018193 - peptidyl-amino acid modification [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Aspartyl/asparaginyl beta-hydroxylase" /protein_id="ELK02335.1" /db_xref="InterPro:IPR007803" /db_xref="InterPro:IPR007943" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:Q28056" /translation="MAVVANGVAGAQVWCVDSTDWNFASLKERSASKPTVPPEEAEPY PWLEEQVPEDTGRQHIEDEVQEEIHSPLHEAVYTDHEDLQQEEDGPAREQQPEDDFLV GSDAEDRFEPLETGTFQEETENTYHVEEPASQADNQDMEETTYEQENPDSIEPVIDDD ERIYPDADDVTYQDYDQKVYEPSDSEGIESSDKVEDSNIILEEVRVPPAEEQQEIPPV KKKKPKLLNKFDKTIKAELDAAEKLRKRGKIEEAVTAFEELIRKYPQSPRARYGKAQC EDDLAEKRRSNEVLRRAIETYQEVAGLPDVPADLVKLSLKRRSDRQQFLGHMRGSLVT LQKLVQLFPDDTSLKNDLGVGYLLIGDNDNAKKVYEEVLNVTPNDGFAKVHYGFILKA QNKIAESIPYLKEGIESGDPGTDDGRFYFHLGDAMQRVGNKEFAHCEAAILHACVHGV LLQALKEKQTHSLCAAEADSKIASEEDFRNSLNLFPGHLMLKNSMVQNKNRVPFSSGD IHDPPQASRRQPFLPQAYKWYQLGHERGHFASVWQRSLYNVNGLKAQPWWTARETGYT ELVKTLERNWKLIRDEGLSVIDKAKGLFLSEDENLREKGDWSQFTLWQQGRKNENACK GVPKTCSLLDKFPETTGCRRGQIKYSVMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGC RIRCANETRTWEEGKVLIFDDSFEHEVWQDATSFRLIFIVDVWHPELTPQQRRSLPAI " assembly_gap 7058903..7059002 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7086276..7086286 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7094820..7094920 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7126749..7127184 /estimated_length=436 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7165018..7165046 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7172805..>7190931) /locus_tag="PAL_GLEAN10019280" mRNA complement(join(<7172805..7173166,7175978..7176095, 7182949..7183121,7183343..7183347,7187699..7187771, 7190853..>7190931)) /locus_tag="PAL_GLEAN10019280" /product="Aspartyl/asparaginyl beta-hydroxylase" CDS complement(join(7172805..7173166,7175978..7176095, 7182949..7183121,7183343..7183347,7187699..7187771, 7190853..7190931)) /locus_tag="PAL_GLEAN10019280" /note="GO_component: GO:0016020 - membrane [Evidence IEA]" /codon_start=1 /product="Aspartyl/asparaginyl beta-hydroxylase" /protein_id="ELK02336.1" /db_xref="InterPro:IPR007943" /db_xref="UniProtKB/Swiss-Prot:Q12797" /translation="MVIALLGVWTSVAVVWFDLVDYEEVLGKLGVYDADGDGDFDVDD AKVLLGKNGLTKDGSNENIDSLEEVLNILAEESSDWFYGFLSFLYDIMTPFEMLEEEE DESETADGEVKSGAPGKWTGNLECCFGKFADTGVQQSDRVTRRRNQELKELTKEELKK EKEKPQSRKESKNEERRKGKKEKENDRKDKKIADSDVSRKESPKSKKDREKEKMGLDK GAKTKENRKKSANIKDVSSKVASRDKDDRKEGRSSTKQAHLAKENNQKRKS" assembly_gap 7212435..7212511 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7257236..7257286 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7300675..7300695 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7318101..7318329 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7327543..7327555 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7328656..7328690 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7339155..7339171 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7401996..7402014 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7405056..7405073 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7448050..7448076 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7471022..7471232 /estimated_length=211 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7487018..7487072 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7496785..7496826 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7508305..7508324 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7519924..7520388 /estimated_length=465 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7529835..7529881 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7567612..7568057 /estimated_length=446 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7605658..7605669 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7651914..7651942 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7663757..7663768 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7673569..7673617 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7720613..7720633 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7758502..7758525 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7759011..7760178 /estimated_length=1168 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7772269..7772305 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7787194..7787223 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7788728..7788783 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7821009..7823768 /estimated_length=2760 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7844962..7844996 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7847106..7847145 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7849198..7849207 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7860864..7860935 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7862776..7862831 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7877936..7877964 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7878472..7878488 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7895459..7895471 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7899068..7899078 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7917833..7917854 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7925049..7925061 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7993936..7994055 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8014904..8015019 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8025857..>8042937) /locus_tag="PAL_GLEAN10019282" mRNA complement(join(<8025857..8025978,8027446..8027583, 8031385..8031475,8031558..8031607,8033717..8033894, 8036373..8036457,8038830..8038880,8042834..>8042937)) /locus_tag="PAL_GLEAN10019282" /product="Gamma-glutamyl hydrolase" CDS complement(join(8025857..8025978,8027446..8027583, 8031385..8031475,8031558..8031607,8033717..8033894, 8036373..8036457,8038830..8038880,8042834..8042937)) /locus_tag="PAL_GLEAN10019282" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0008242 - omega peptidase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_process: GO:0006541 - glutamine metabolic process [Evidence IEA]" /codon_start=1 /product="Gamma-glutamyl hydrolase" /protein_id="ELK02337.1" /db_xref="InterPro:IPR011697" /db_xref="InterPro:IPR015527" /db_xref="UniProtKB/Swiss-Prot:A7YWG4" /translation="MQKCHNKMKTLGKYYIAASYVKYLESAGARVVPVRLDLTKKEYK KLFQSLNGVLFPGGSVNLKRSGYAHVAKIFYNFARQSYDDGDYFPVWGTCLGFEELSY LVSGEYLLSQTNTTKITMPLNFTEGKNSLSTLLKILTAIEPLTANFHKWSLSKMNFTK NAKLKEFFNVLTTNTDGTIEFISTVEGYKYPVYGVQWHPEKAPYEWGKFPGISHAPNA VRAAFYLADFFVSEARKNSHHFESDVEEDEALIYQFHPVYTANISSFQQSYIFN" assembly_gap 8031622..8031654 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8041067..8041092 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8045930..8046272 /estimated_length=343 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8058453..>8088978) /locus_tag="PAL_GLEAN10019283" mRNA complement(join(<8058453..8058629,8061014..8061124, 8062703..8062896,8068440..8068593,8088874..>8088978)) /locus_tag="PAL_GLEAN10019283" /product="Alpha-tocopherol transfer protein" CDS complement(join(8058453..8058629,8061014..8061124, 8062703..8062896,8068440..8068593,8088874..8088978)) /locus_tag="PAL_GLEAN10019283" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Alpha-tocopherol transfer protein" /protein_id="ELK02338.1" /db_xref="InterPro:IPR001071" /db_xref="InterPro:IPR001251" /db_xref="UniProtKB/Swiss-Prot:P49638" /translation="MNYYCWKMSKIDCQPVIDIIYEVLQNEPWHIVSVYLLKNYYKWR AECPEISADLHPRSILGLLKAGYLGVLRERDPTGSKVLIYRIAHWDPKVFTAYDVFRV SLITSELIVQEVETQRNGIKAVFDLEGWHFSHAFQITPSVAKKIAAVLTDSFPLKVRG IHLINEPIIFHAVFSMVKLFLTEKIKGRIHMHGTNYKESLLQHFPGILPLEYGGEDFS MEDICQEWTNFIMKSENYLSSISQTVLT" assembly_gap 8068192..8068218 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8075832..8075986 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8091623..8091685 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8111667..>8111942) /locus_tag="PAL_GLEAN10019284" mRNA complement(<8111667..>8111942) /locus_tag="PAL_GLEAN10019284" /product="hypothetical protein" CDS complement(8111667..8111942) /locus_tag="PAL_GLEAN10019284" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02339.1" /translation="MSVSRARLGSAPCLPPSGCGLGPGRGSFPDPPRPRGLPPEPQTP GPGRTPQHQPQDRNNVRPGHRYSAGSDGVEPKPHARVELQGSGLCRA" gene <8117864..>8221780 /locus_tag="PAL_GLEAN10019285" mRNA join(<8117864..8118016,8128363..8129961,8221586..>8221780) /locus_tag="PAL_GLEAN10019285" /product="YTH domain family protein 3" CDS join(8117864..8118016,8128363..8129961,8221586..8221780) /locus_tag="PAL_GLEAN10019285" /codon_start=1 /product="YTH domain family protein 3" /protein_id="ELK02340.1" /db_xref="InterPro:IPR007275" /db_xref="UniProtKB/Swiss-Prot:Q5RFL8" /translation="MLGCSVSFIRIITSYLIQTYFLVSVQNGSIHQKDAVNDDDFEPY LSSQTNQSNSYPPMSDPYMPSYYAASIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNG EHHYIPDGVFGQPGALGNTPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSN YGYPPSSLGRAITDGQAGFGSDTLSKVPGISSIEQGMTGLKIGGDLTAAVTKTVGTAL SSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPI KHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQP QQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNGAGGENFGLGVVPVSASP SSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHG NKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFE VKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIF DDFAHYEKRQEEEEAMRRRRCVLNEKEMASHALVSLTAGALPHAALVFTLTVFSHDGP THKPPCPPVLNEETTPILERNSHM" assembly_gap 8119813..8121766 /estimated_length=1954 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8134509..8134533 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8139595..8139722 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8143083..8143133 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8160316..8160383 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8174850..8175719 /estimated_length=870 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8212235..8212475 /estimated_length=241 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8214871..8214909 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8232310..8232325 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8243668..8244109 /estimated_length=442 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8276530..8276601 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8297470..8297656 /estimated_length=187 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8356748..8356788 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8416417..8416461 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8421906..8421917 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8437962..8437972 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8458616..8459738 /estimated_length=1123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8524534..8524906 /estimated_length=373 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8574815..8575000 /estimated_length=186 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8624490..8624504 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8628730..8628769 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8648265..8648306 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8650614..8650631 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8693146..8693201 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8700388..8700481 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8709366..8709398 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9030422..9031672 /estimated_length=1251 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9058690..9058712 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9064061..9064101 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9078173..9078280 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9100395..9100438 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9134778..9134806 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9167996..9168009 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9169838..9169861 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9183673..9184482 /estimated_length=810 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9184751..9184819 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9190843..9190880 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9193760..9193871 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9198280..>9224363) /locus_tag="PAL_GLEAN10019292" mRNA complement(join(<9198280..9198567,9205975..9206150, 9216226..9216432,9216909..9217496,9224312..>9224363)) /locus_tag="PAL_GLEAN10019292" /product="25-hydroxycholesterol 7-alpha-hydroxylase" CDS complement(join(9198280..9198567,9205975..9206150, 9216226..9216432,9216909..9217496,9224312..9224363)) /locus_tag="PAL_GLEAN10019292" /note="GO_function: GO:0004497 - monooxygenase activity [Evidence IEA]; GO_function: GO:0005506 - iron ion binding [Evidence IEA]; GO_function: GO:0009055 - electron carrier activity [Evidence IEA]; GO_function: GO:0020037 - heme binding [Evidence IEA]" /codon_start=1 /product="25-hydroxycholesterol 7-alpha-hydroxylase" /protein_id="ELK02341.1" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002403" /db_xref="UniProtKB/Swiss-Prot:O75881" /translation="MRTLQKQHGDIFTLLLGGKYITLILDPCQYQLVIKNHKLSFQMF TKKIMKKVFSIQKLMTNDDLNDELHDCYQLLQGKSLDVLMENTMQNLQQVFEPQLFKS TNWDMAYLLTFCSSVIFEITFTTIYGRFLAGDRKKFITELQDDFFKFDNKFPYLVSDI PIELLGNVKSIQKKLIKCLTSENIAKMQELSEVVQMRQDILEKYYTFKDAEIGAHHLG FLWASVANTIPTTFWVMYYLLRHPEAMAALRDEIDHLLQSTGQKRGSGFSIHITREQL DSLVYLESTILEALRLCSFSSIIRFVQEDLTLPSETGDYRLRKGDFIAIFPPFLHYDP EIFEAPEEFRFDRFTENGKKKTTFFKRGKKLRYYLLPFGFGTSKCPGRFLAVNEIKQL LVILLTYFDLEIMDDKLIQLDYSRFLFGIQYPNSDVLFRYKVRS" assembly_gap 9316427..9316452 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9342091..9342467 /estimated_length=377 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9348807..9349073 /estimated_length=267 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9349424..9349457 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9423629..9423701 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9427852..9427903 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9432467..9432490 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9501872..9501892 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9517334..9517374 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9541288..9541340 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9579672..9580006 /estimated_length=335 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9585597..9585650 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9600208..9600365 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9619319..9619356 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9665051..9665063 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9707090..9707120 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9717425..9717874 /estimated_length=450 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9768162..9768277 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9798259..9798280 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9818898..9818926 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9829979..>9863131) /locus_tag="PAL_GLEAN10019296" mRNA complement(join(<9829979..9830100,9837895..9838027, 9839037..9839111,9839196..9839312,9847728..9847917, 9857414..9857505,9862970..>9863131)) /locus_tag="PAL_GLEAN10019296" /product="Armadillo repeat-containing protein 1" CDS complement(join(9829979..9830100,9837895..9838027, 9839037..9839111,9839196..9839312,9847728..9847917, 9857414..9857505,9862970..9863131)) /locus_tag="PAL_GLEAN10019296" /note="GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_process: GO:0030001 - metal ion transport [Evidence IEA]" /codon_start=1 /product="Armadillo repeat-containing protein 1" /protein_id="ELK02342.1" /db_xref="InterPro:IPR000225" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q3ZBE1" /translation="MNEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHP NPPVVHSALLALRYLAECRANREKMKGELGMMLSLQNVIQKTTTPGETKLLASEIYDI LQSSNMADSDSFNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLK IKGVISFTFQMAVQRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQ DTPVEVEQNTELPDYLPEDESPTKEQDKAVSRVGSHPEAMVLVGGIRDTSCMGLTVLG RTIMEQMTADVMCQEVVKEV" assembly_gap 9836453..9836979 /estimated_length=527 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9847243..9847255 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9897837..>9928941 /locus_tag="PAL_GLEAN10019297" mRNA join(<9897837..9897944,9904067..9904182,9923014..9923246, 9924770..9925022,9925436..9925604,9928753..>9928941) /locus_tag="PAL_GLEAN10019297" /product="Mitochondrial fission regulator 1" CDS join(<9897837..9897944,9904067..9904182,9923014..9923246, 9924770..9925022,9925436..9925604,9928753..9928941) /locus_tag="PAL_GLEAN10019297" /codon_start=1 /product="Mitochondrial fission regulator 1" /protein_id="ELK02343.1" /db_xref="InterPro:IPR007972" /db_xref="UniProtKB/Swiss-Prot:Q15390" /translation="LPQVLWSGKPYGSSRSIVRKIGTNLSLIQCPRVQFQLTSPTTEW SPSHLGEDAVASFADVGWVATEEGECSTRQRTEVCLRQPLQDELPFFEKPPSRQFSLP NLSPEKPQLKTPLANEEALQKICALENELAALRAQIAKIVTLQEQHNLTAGDLDPTTP VTTGPPSVPPPPPPPPPPLPPAVHQSTSAIDLIRERREKKTHAGKTLDKHSPKNPDMP NMLEILKDMNSVKLRSVKRSEQAIKPKPVDATDPAALIAEALKKKFAYRYRSDSQGEA EKGIPKSASEAASETVLILQPFPKVTENSFHKIREGREGHVDIPRKVNDNSASRTARL LQGSPLQRKAKLFITGLLLEV" gene complement(<9935198..>10019313) /locus_tag="PAL_GLEAN10019298" mRNA complement(join(<9935198..9935406,9939234..9939314, 9939932..9940037,9940613..9940757,9942785..9942876, 9943066..9943197,9946352..9946452,9948257..9948352, 9953903..9953966,9955728..9955879,9972570..9972653, 9975940..9976000,10019176..>10019313)) /locus_tag="PAL_GLEAN10019298" /product="High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A" CDS complement(join(9935198..9935406,9939234..9939314, 9939932..9940037,9940613..9940757,9942785..9942876, 9943066..9943197,9946352..9946452,9948257..9948352, 9953903..9953966,9955728..9955879,9972570..9972653, 9975940..9976000,10019176..10019313)) /locus_tag="PAL_GLEAN10019298" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO_function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]" /codon_start=1 /product="High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A" /protein_id="ELK02344.1" /db_xref="InterPro:IPR002073" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR023088" /db_xref="UniProtKB/Swiss-Prot:Q13946" /translation="MEVCYQLPVLPLDRPVPQHVLSRRGAISFSSSSALFGCPNPRQL SQRRGAISYDSSDQTALYIRMLGDVRVRSRAGFESERRGSHPYIDFRIFHAQSEIEVS VSARNIRRLLSFQRYLRSSRFFRGTTVSNSLNILDDDYNGQAKCMLGKVGNWNFDIFL FDRLTNGNSLVSLTFHLFSLHGLIEYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAA DVTQAMHCYLKEPKLASSVTPWDVLLSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK NTSVLENHHWRSAVGLLRESGLFSHMPLESRQQMETQIGALILATDISRQNEYLSLFR SHLDRGDLHLEDARHRHLVLQMALKCADICNPCRTWELSKQWSEKVTEEFFHQGEYRD IEKKYRLGVSPLCDRQTESVANIQIGFMTYLVEPLFTEWARFSNSRLSQTMLGHVGLN KASWKGLQREQASSEDTDAAFEELNSQLLPQENRLS" assembly_gap 9948365..9948389 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9966931..9966940 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9996271..9997770 /estimated_length=1500 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10019323..10019468 /estimated_length=146 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10027888..10027944 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10044037..10044058 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10093215..10093286 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10152489..>10203423 /locus_tag="PAL_GLEAN10019300" mRNA join(<10152489..10152607,10174753..10174966, 10178490..10178661,10203329..>10203423) /locus_tag="PAL_GLEAN10019300" /product="DnaJ like protein subfamily C member 5B" CDS join(10152489..10152607,10174753..10174966, 10178490..10178661,10203329..10203423) /locus_tag="PAL_GLEAN10019300" /note="GO_function: GO:0031072 - heat shock protein binding [Evidence IEA]; GO_function: GO:0051082 - unfolded protein binding [Evidence IEA]; GO_process: GO:0006457 - protein folding [Evidence IEA]" /codon_start=1 /product="DnaJ like protein subfamily C member 5B" /protein_id="ELK02345.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR003095" /db_xref="UniProtKB/Swiss-Prot:Q9UF47" /translation="MARNIPNQRQRTMSTSGEALYEILGLHKGASNEEIKKTYRKLAL KHHPDKNPDDPAAAEKFKEINNAHTILTDLSKRNIYDKYGSLGLYVAEQFGDENVNTY FMLSSWWAKTLFVIIGLLTGCYFCCCLCCCCNCCCGRCRPKSSVPEEDFYMSPEDLEE QIKTDMEKDVEFPVVLQPTNANEKTQLIREGPRSYCTDS" assembly_gap 10187302..10190247 /estimated_length=2946 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10197024..10197758 /estimated_length=735 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10198660..10199855 /estimated_length=1196 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10207983..10208017 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10227133..>10265560 /locus_tag="PAL_GLEAN10019301" mRNA join(<10227133..10227300,10227825..10227997, 10233046..10233211,10235107..10235202,10246162..10246395, 10246752..10246774,10246868..10246992,10248235..10248521, 10249833..10250120,10265438..>10265560) /locus_tag="PAL_GLEAN10019301" /product="Tripartite motif-containing protein 55" CDS join(10227133..10227300,10227825..10227997, 10233046..10233211,10235107..10235202,10246162..10246395, 10246752..10246774,10246868..10246992,10248235..10248521, 10249833..10250120,10265438..10265560) /locus_tag="PAL_GLEAN10019301" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Tripartite motif-containing protein 55" /protein_id="ELK02346.1" /db_xref="InterPro:IPR000315" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR017903" /db_xref="InterPro:IPR018957" /db_xref="UniProtKB/Swiss-Prot:Q9BYV6" /translation="MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQH NLCRKCASDIFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVE NIIDIYKQESTRPEKKSDQPRCEEHEEEHINIYCLNCEVPTCSLCKVFGAHKDCQVAP LTHVFQRQKSELSDGIAGLVGSNDRVQGVISQLEDTCKTIEECCKKQKQELCEKFDYL YGILEERKNEMTQVITRTQGEKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAV FLQNAKTLLQKISEASKAFQMEKIEHGYENMNHFTVNLNREEKIIREIDFYREDAEEE EEEEEEEGEEVEGEGEGEEGGGGGGGEGVKKVEEVEKVRTASLGEDESLEVALEPSQL ASELQAAPATLPVSSPEPSPALPPAVDAPVTQGEVVPTGSQQTTESEMPVPAATDTAD PLFYPSWYKGQTRKATANPPPNPGSEGPGHTGPPGSEDSNVQKAEVAEAAASERAAVS GKETSSPAATSQIGFEDPPLQGQAAASGSGNGADSEPARHIFSFSWLNSLKE" assembly_gap 10261594..10261610 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10267868..>10268458) /locus_tag="PAL_GLEAN10019302" mRNA complement(<10267868..>10268458) /locus_tag="PAL_GLEAN10019302" /product="Corticoliberin" CDS complement(10267868..10268458) /locus_tag="PAL_GLEAN10019302" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005179 - hormone activity [Evidence IEA]" /codon_start=1 /product="Corticoliberin" /protein_id="ELK02347.1" /db_xref="InterPro:IPR000187" /db_xref="InterPro:IPR003620" /db_xref="UniProtKB/Swiss-Prot:P49926" /translation="MRLPLLVSLGVLLVAFLPCPPCRALLSRGPVPGARQDPQLPQPL DFFQPPLQPQQPQQPQARPVLLRMGEEYFLRLGNLNKSPAAPLSPASSLLSGNSGSRI SPDEVAANFFRALLQQLSLPRRPLDSPAGPAERGAENDLGGRQEAPERERRSEEPPIS LDLTFHLLREVLEMARAEQLAQQAHNNRKLMEIIGK" assembly_gap 10314780..10314789 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10317150..10317253 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10351544..10353301 /estimated_length=1758 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10376317..10377677 /estimated_length=1361 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10406170..10407238 /estimated_length=1069 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10410395..>10411510 /locus_tag="PAL_GLEAN10019303" mRNA <10410395..>10411510 /locus_tag="PAL_GLEAN10019303" /product="Ribosome biogenesis regulatory protein like protein" CDS 10410395..10411510 /locus_tag="PAL_GLEAN10019303" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_process: GO:0042254 - ribosome biogenesis [Evidence IEA]" /codon_start=1 /product="Ribosome biogenesis regulatory protein like protein" /protein_id="ELK02348.1" /db_xref="InterPro:IPR007023" /db_xref="UniProtKB/Swiss-Prot:Q2KIH4" /translation="MEGQNVEELLARAEQDEAEKLQRITVHKELELEFDLGNLLALDR NPPTGLRREGPTPEAELRALARDNTQLLINQLWQLPTERVEEALVARLPEPTTRLPRE KPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRARDDTKEWLIEM PGSADPLEDQFAKRIQAKKERVAKNELNRLRNLARSHKTQLPSAAGLHPTGHQSKEEL GRALQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKSQLEMLRVMN SKKPQLDITRATNKQMREEEQEEAAKRRKLSQKGRRKGGRQGPGGRQGPGGKRKGGLP SQGGRRKGGLGGKMNSGPPGLGGKRKGGQHQGGKRRK" assembly_gap 10412444..10412563 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10420127..>10481843 /locus_tag="PAL_GLEAN10019304" mRNA join(<10420127..10420153,10424010..10424164, 10424314..10424510,10427349..10427454,10430507..10430659, 10432483..10432581,10435136..10435214,10435386..10435482, 10437994..10438151,10473444..10473594,10477008..10477069, 10479820..10479914,10481660..>10481843) /locus_tag="PAL_GLEAN10019304" /product="Hydroxyacid-oxoacid transhydrogenase, mitochondrial" CDS join(10420127..10420153,10424010..10424164, 10424314..10424510,10427349..10427454,10430507..10430659, 10432483..10432581,10435136..10435214,10435386..10435482, 10437994..10438151,10473444..10473594,10477008..10477069, 10479820..10479914,10481660..10481843) /locus_tag="PAL_GLEAN10019304" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0046872 - metal ion binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Hydroxyacid-oxoacid transhydrogenase, mitochondrial" /protein_id="ELK02349.1" /db_xref="InterPro:IPR001670" /db_xref="UniProtKB/Swiss-Prot:Q5RF11" /translation="MRCVSIYLLDLQNMGAKNVCLMTDKNLSQLPPVQIVMDSLVTNG INFKVYDNVRVEPTDRSFLEAIEFARKGAFDAYVAVGGGSTMDTCKAANLYASSLHSD FLDYVSAPIGKGKPVSVPLKPLIAGIASRALKPTLGLVDPRHTLHMPGRVVANSGFDV LCHALESYSALPYHMRSPCPSNPIFRPAYQGSNPVSDIWAVQALRIVAKYLKRAVRNP DDLEARSNMHLASTFAGIGFGNAGVHLCHGMSYPISGLVKTYKAKDYNVDHPLVPHGL SVVLTSPAVFTFTAQMFPERHLEMAEILGADTRTARAADAGPVLADTLRKFLFDLDVD DGLAAIGYSKADIPALVKGTLPQVVIESDLYSPRPLELLPHRSDRRASEGRRSSRLQS SWQQGPHAAKNPSRPVGIAESKSSNLCGNRAYGKSLIPPVARISVKAPAAVLEAAATG SENRAVLTRGSRHLKKMTEEYPTLPQGAEASLPLTGSASCGVPSILRKMWTRHKKKSE YVGATNSAFEAD" assembly_gap 10421514..10421523 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10440836..10440881 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10445187..10445215 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10487621..10487699 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10515650..10515973 /estimated_length=324 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10525539..>10554788) /locus_tag="PAL_GLEAN10019305" mRNA complement(join(<10525539..10525667,10526922..10527101, 10527523..10527627,10527716..10527832,10530846..10530960, 10531383..10531525,10533357..10533725,10534854..10535087, 10538077..10538181,10538779..10538853,10540740..10540908, 10542473..10542693,10543784..10543876,10545802..10545873, 10546188..10546293,10554569..10554624, 10554753..>10554788)) /locus_tag="PAL_GLEAN10019305" /product="Myb-related protein A" CDS complement(join(10525539..10525667,10526922..10527101, 10527523..10527627,10527716..10527832,10530846..10530960, 10531383..10531525,10533357..10533725,10534854..10535087, 10538077..10538181,10538779..10538853,10540740..10540908, 10542473..10542693,10543784..10543876,10545802..10545873, 10546188..10546293,10554569..10554624,10554753..10554788)) /locus_tag="PAL_GLEAN10019305" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Myb-related protein A" /protein_id="ELK02350.1" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR014778" /db_xref="InterPro:IPR015395" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/Swiss-Prot:P10243" /translation="MRYLKDGEEVAQPTRSGWPERSREVRRVGDREDEDDDLQYADHD YEVPQQKGLKKLWNRVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQ KVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPE VKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYL QDGIKSERSSSKLQHKPCATMDHLQTQNQFYIPIPGYQYVSPEGNCVEHVQTSSAFIQ QPFVDEDPDKEKKIKELELLLMSAENEVRRKRVPSQPGSFSSWSGSFLMDDSMANTLN SLEEHTSEFYSMDENQTMSAQQNSPTKFLAVEANAVLSSLQTIPEFAETLELIESDPV AWSDVTSFDLSDAAASPVKSTPVKLMRIQHNEGAMECQFNVSLVLEGKKNGCHGADSE AVSLTSPSVAKFSTPPTILRKKRRMRVGQSPGSELSDGTFNDGGNTALKHTPVKTLPF SPSQFFNTCPGNEQINIENPSFTSTPICGQKVLITTPLHKETTPKDQKENVGFRTPTI RRSILGTTPRTPTPFKNALAAQEKKYGPLKIVSQPLAFLEEDIREVLKEETGTDIFLK EEDEPAYKSCKQEHTASVKKVRKSLVLDNWEKEEPSTQLLNEDISDMQSENVFTTSLL MIPLLEIHDNRCNLSPEKQDTNSTNKTYTLNKKKPNPNTSKVVTLEKNLQSNCEWETV VYGKTEDQLIMTEQARRYLSTYTATSSTSRALIL" assembly_gap 10555193..10555675 /estimated_length=483 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10558349..10558418 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10559989..10560007 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10569999..>10592213) /locus_tag="PAL_GLEAN10019306" mRNA complement(join(<10569999..10570867,10580426..10580512, 10589424..10589635,10589780..10591592, 10591721..>10592213)) /locus_tag="PAL_GLEAN10019306" /product="Deubiquitinating protein VCIP135" CDS complement(join(10569999..10570867,10580426..10580512, 10589424..10589635,10589780..10591592,10591721..10592213)) /locus_tag="PAL_GLEAN10019306" /codon_start=1 /product="Deubiquitinating protein VCIP135" /protein_id="ELK02351.1" /db_xref="InterPro:IPR003323" /db_xref="UniProtKB/Swiss-Prot:Q8CF97" /translation="MSQPPPPPPLPPPPPPPEAPQTPPSLAAAAAAAPGGLSKRRDRR ILSGSCPDPKCQARLFFPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRN ALLGVTGAPKKNTELVKVMGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFD CALLVHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFQQHLARYQALFHDFIDAA EWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATF LPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPMNLLPKAWGV PQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVFMDKHGIHPSLVADVHQY FYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHVPPEWLAPGGKLYNLAK STHGQLRSDKNYSFPLNNLVCSYDPVKDVLVPDYGLSNLTACNWCHGTSVRRVRGDGS IVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGGRVVRETVYWFQY ESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILYQTAKKNPDDYTPVNIDG AHAQRVGDVQGQELESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNITEQASVMQ KRKTEKLKQEQKGQPRTVSPSAIRDGPSSAPATPTKAPYSPTTSKEKKIRITTNDGRQ SMVTLKSSTTFFELQESIAREFNIPPYLQMEKEPVPLQHGDRITIEILKSKAEGGQAA AAHSAHTVKEEIAVTGKLSSKELQEQADKEMYSLCLLATLMGEDVWSYAKGLPHMFQQ GGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLELCVDAAGHFPIGPDVEDL VKEAVSQVRAESTTRSRESSPSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGSAS SNPHFDPRARDTPVVRKHNTGTDYSNSSTKTEPSIFTAAPSNSELIRMAPGVVTMRDS RQIDPDLVEAQRKKLQEMVSSIQASMDKHLRDQSTEQSPSDLPQRKGEVMSSMKSGTL QTCLPESFSLTGGTENLNTETTDSCMAEALGAAFATRSKAQKGNSVEEPEEMDSQDAE MTNTTEPMDHS" assembly_gap 10589636..10589776 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10591605..10591650 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10592617..10592685 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10625785..10626037 /estimated_length=253 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10632842..10632877 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10635243..10635372 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10636043..10636077 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10650180..10650225 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10661509..10661523 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10667005..10667027 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10679449..10679512 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10682411..>10723274 /locus_tag="PAL_GLEAN10019307" mRNA join(<10682411..10682530,10685632..10685715, 10688420..10688492,10691146..10691221,10697390..10697477, 10701460..10701509,10703954..10704011,10706489..10706572, 10706673..10706804,10710015..10710127,10710274..10710310, 10710912..10710998,10712787..10712882,10714569..10714724, 10719758..10719847,10723104..>10723274) /locus_tag="PAL_GLEAN10019307" /product="Serine/threonine-protein kinase Sgk3" CDS join(10682411..10682530,10685632..10685715, 10688420..10688492,10691146..10691221,10697390..10697477, 10701460..10701509,10703954..10704011,10706489..10706572, 10706673..10706804,10710015..10710127,10710274..10710310, 10710912..10710998,10712787..10712882,10714569..10714724, 10719758..10719847,10723104..10723274) /locus_tag="PAL_GLEAN10019307" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0035091 - phosphoinositide binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]" /codon_start=1 /product="Serine/threonine-protein kinase Sgk3" /protein_id="ELK02352.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR001683" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR017892" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q5R7A7" /translation="MVVYSQSPRQEAGNNPSILRSPFLNKCSSIPCTQSQCREMVYKV LVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAMALKIPAKRIFGDNFDPDFIKQRRAGL NEFIQNLVRHPELYSHPDVRAFLQMDSPKHQSDPSEDEDERSTQKLHSTSQNINLGPS GNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAE RNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAA EIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPE YLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLNLRPGV SLTAWSILEELLEKDRQNRLGAKEDFLEIQNHPFFESLSWTDLVQKKIPPPFNPNVAG PDDIRNFDAVFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDLFL" assembly_gap 10687015..10687101 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10699528..10699547 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10716212..10716399 /estimated_length=188 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10725331..10725440 /estimated_length=110 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10727110..10727299 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10729626..>10758680 /locus_tag="PAL_GLEAN10019308" mRNA join(<10729626..10729719,10729812..10729942, 10730016..10730075,10731787..10731982,10732823..10732945, 10733062..10733166,10736009..10736134,10737686..10737923, 10741771..10741976,10746092..10746258,10746772..10746951, 10749728..10749870,10753360..10753469,10758514..>10758680) /locus_tag="PAL_GLEAN10019308" /product="hypothetical protein" CDS join(10729626..10729719,10729812..10729942, 10730016..10730075,10731787..10731982,10732823..10732945, 10733062..10733166,10736009..10736134,10737686..10737923, 10741771..10741976,10746092..10746258,10746772..10746951, 10749728..10749870,10753360..10753469,10758514..10758680) /locus_tag="PAL_GLEAN10019308" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006260 - DNA replication [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02353.1" /db_xref="InterPro:IPR001208" /db_xref="InterPro:IPR016027" /db_xref="UniProtKB/Swiss-Prot:Q5XI14" /translation="MSTLKMKEAALIYLDKSGGLQKFIDDCKYYNDLKQSYAVYRFNI LINPSDVVELDTELGNHILHQPLEASQVFQSVCFIAVKTLSLIGQLQTENQINIVLKL THLPPLPSYSLDFCEFPLDYTSQRFYMMQGIVIAMTTVTKYTQGARFLCSDEACPLSK GFQYIRVHVPGATESATIRNDFLCNLCSSSLQEDRKFRVLGDKQIVEIIPAKALHAFQ GYSNKQRFRFQSLTIFLRDELVNKMNIGNEYKIIGIPTCVKTSQTSVCIETNSITFYN PKVPSGISDSFRCLLSLTSSSCWKFTAILANIFASQIVPPGTYNLLKLCLLMSLVQTS VRNKELEDSLDILIITSDTLLVDRLLNFSINLVPRGIRHPVSAEIFPTVSRNKYGTGA VSVQAGSALLAKGSICFIGDLASHKKDKLEQLQSVMESRSITVYISGKKFGDDIDQQM TFPVQCSFWSFVDLDSSSRRNTQKTNTLIGQMDCSLIPANLVEAFGLLINCNESSPCH PFLSNVQHTLKKAIDPEGLLYVASKQFTTEDFEKLLAFAKNLNVEFSLEAERMIHGYY LASRRIRTDSICGSKLSSSALKYLVSLSEAHARLNLRTKVIKEDALIAALLFETSLTL KYGTTVFRVAPNAVFPFELYNEEYLEKRDIYLTQCQQQLLQFIATYGPGTTIFASDE" assembly_gap 10742591..10742626 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10746590..10746649 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10780476..>10784605) /locus_tag="PAL_GLEAN10019309" mRNA complement(join(<10780476..10780589,10783344..10783554, 10783793..10783976,10784305..>10784605)) /locus_tag="PAL_GLEAN10019309" /product="Transcription factor 23" CDS complement(join(10780476..10780589,10783344..10783554, 10783793..10783976,10784305..10784605)) /locus_tag="PAL_GLEAN10019309" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Transcription factor 23" /protein_id="ELK02354.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="UniProtKB/Swiss-Prot:Q2T9Q7" /translation="MTLLPQRPRLRQGSDPAPAPQVRADSAALLWCPDTQLRSYRRLS SGAPAEKALPAGAGRGRLFHLDQNGVTRAVLATQTRLEAPSPLAQRSRALDGRSRKGK AGTPPLLGPLRSPGIRTPKSPHTREANESSRSDLLSENAPSHVGRSGWRSGAATGLQL PSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPADPG LGALRGDGYLHPVKKWPMRSRLYIGATGQFLKHSISGEKANHGSAPADSQP" assembly_gap 10783572..10783658 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10822447..10823009 /estimated_length=563 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10835646..>10850282) /locus_tag="PAL_GLEAN10019310" mRNA complement(join(<10835646..10835730,10837362..10837510, 10840282..10840393,10844954..10845039,10845818..10845883, 10846541..10846669,10847604..10847838, 10850140..>10850282)) /locus_tag="PAL_GLEAN10019310" /product="COP9 signalosome complex subunit 5" CDS complement(join(10835646..10835730,10837362..10837510, 10840282..10840393,10844954..10845039,10845818..10845883, 10846541..10846669,10847604..10847838,10850140..10850282)) /locus_tag="PAL_GLEAN10019310" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="COP9 signalosome complex subunit 5" /protein_id="ELK02355.1" /db_xref="InterPro:IPR000555" /db_xref="UniProtKB/Swiss-Prot:Q92905" /translation="MAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKP WTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEG TETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQ FQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHC KQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQS EAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS " assembly_gap 10847928..10847956 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10849353..10849425 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10852236..10852644 /estimated_length=409 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10860131..>10956233 /locus_tag="PAL_GLEAN10019312" mRNA join(<10860131..10860229,10862112..10862211, 10877011..10877114,10881593..10881673,10882699..10882797, 10883495..10883934,10890797..10890895,10892013..10892083, 10897211..10897304,10898319..10898376,10900045..10900235, 10902219..10902340,10902706..10902784,10910180..10910309, 10911839..10911986,10921350..10921502,10924506..10924618, 10927895..10928044,10928433..10928579,10931071..10931175, 10932883..10932949,10933524..10933668,10936553..10936692, 10939048..10939188,10940872..10940918,10943497..10943557, 10952715..10952824,10954086..10954224,10956022..>10956233) /locus_tag="PAL_GLEAN10019312" /product="Centrosome and spindle pole-associated protein 1" CDS join(10860131..10860229,10862112..10862211, 10877011..10877114,10881593..10881673,10882699..10882797, 10883495..10883934,10890797..10890895,10892013..10892083, 10897211..10897304,10898319..10898376,10900045..10900235, 10902219..10902340,10902706..10902784,10910180..10910309, 10911839..10911986,10921350..10921502,10924506..10924618, 10927895..10928044,10928433..10928579,10931071..10931175, 10932883..10932949,10933524..10933668,10936553..10936692, 10939048..10939188,10940872..10940918,10943497..10943557, 10952715..10952824,10954086..10954224,10956022..10956233) /locus_tag="PAL_GLEAN10019312" /codon_start=1 /product="Centrosome and spindle pole-associated protein 1" /protein_id="ELK02356.1" /db_xref="UniProtKB/Swiss-Prot:Q1MSJ5" /translation="MADNLDEFIEEQKAKLAKDKAELENDPPYMEMKGKASEKLSENS KILISMAKENIPPNSQQTRGSLGIDYGLSLPLGEDYERKKHKLKEELRQDYRRYLTQK NFLSTSETDPSTLGVSLPIGERLSAKERLKLERNKEYNQFLRGKEESTEKFRQEEKSN EHKSQRNKKPINQVKPDLPSQVKTSRENSEGPRRDVLTPSEAYEQLLNQRRLEEDRYR QLDDEIELRNRRIIKKTNEEVGISNKNHQRFASRVDIPGRRFHRFNEDRDFDGQFYRP DQDPEVSEEMDERFRYESDFDRRPLRVYTDNRTYGNRQGNAPAVEHGGDVTERSDIRI SSAGGKRTQDNDPSKSTNQYICSPFAGMLFGGEDRETIQKRKEKYRLELLEQMAEQQK NKRREKDLELRVAASGAQDPEKSPDRLKQFSVAPRHYEETIPPERPRVAFQTPLPPLS TPSAPPVPPQNEDLHSGLSSTLGEMVAPRVAPLPPPPILPPLATNYRTPYDDAYYFYG ARNTLNPSLAYYGSGMVGVQPAAYVSAPVVPQPAQPLMNTVGQNELKITSDRAVNSGL FFEDKPKPSKQSLQSYQQALQQQIREREERRKKEREEKEDYEAKLEAEMRSYNPWGKG GGGAPLRDAQGNLITDLNRMHRQNVDAYHNPDARTYEDKRAVVALDQNLATSNAENLE DSTNKNSGCVQTQSSPFARGNIFGEPPTELQIKQQELYKNFLRFQIEEKKQREEAERE RLRIAEEKEEKRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEELIRLAEERRKEAER KKKEEEEKHNLQLQHYYERENVPGPESKHLRQPSPVVPALQNKIASKLQRPPSVDSII SSFIQERSVSRAQSPPVPARKNQLRAEEEKRNVIMELSEMRKQLRSEERRLQGQLLRV DDDEARSRQAPVASVRLEKRERNPMDIFDMARHRLQAPVRRQSPKDVDTTAFQNILDF NELKDRDSETRVDLKYMYPDPPRDHYTLEIQQQALLREQQKRLNRLKMQEGAGVNLAA VPSTKIQDHGMPRDDTNDLKNSLLESDSAFIGAYGETYPALEEDAPLPPSQLPSARER RRDKLKGLDFDSSRPNAPPDGLSLKSVSSINTDQIRMRNEERMRRLNELQSKPINTDD ESSLVDPDDIMKHVGDDRSNSVATEPWLRPGTSETLKQFVAEQLKQEQPRGPGKPGPF SWQGLSTAHG" assembly_gap 10944937..10944950 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10959240..>11056515) /locus_tag="PAL_GLEAN10019313" mRNA complement(join(<10959240..10959404,10960902..10961019, 10962010..10962148,10962408..10962587,10963332..10963500, 10965022..10965161,10968959..10969091,10970685..10970757, 10972395..10972533,10972616..10972751,10973831..10973960, 10976786..10976916,10977803..10977963,10978911..10979083, 10979217..10979368,10979725..10979894,10979991..10980031, 10984707..10984797,10989377..10989527,10989758..10989916, 10990778..10990906,10994318..10994469,10996389..10996560, 11000117..11000201,11000469..11000674,11001015..11001126, 11005071..11005272,11005819..11005927,11006030..11006169, 11006264..11006363,11009451..11009685,11012010..11012143, 11013044..11013219,11016309..11016419,11018744..11019020, 11024000..11024179,11025563..11025709,11026869..11027025, 11027554..11027584,11056392..>11056515)) /locus_tag="PAL_GLEAN10019313" /product="Brefeldin A-inhibited guanine nucleotide-exchange protein 1" CDS complement(join(10959240..10959404,10960902..10961019, 10962010..10962148,10962408..10962587,10963332..10963500, 10965022..10965161,10968959..10969091,10970685..10970757, 10972395..10972533,10972616..10972751,10973831..10973960, 10976786..10976916,10977803..10977963,10978911..10979083, 10979217..10979368,10979725..10979894,10979991..10980031, 10984707..10984797,10989377..10989527,10989758..10989916, 10990778..10990906,10994318..10994469,10996389..10996560, 11000117..11000201,11000469..11000674,11001015..11001126, 11005071..11005272,11005819..11005927,11006030..11006169, 11006264..11006363,11009451..11009685,11012010..11012143, 11013044..11013219,11016309..11016419,11018744..11019020, 11024000..11024179,11025563..11025709,11026869..11027025, 11027554..11027584,11056392..11056515)) /locus_tag="PAL_GLEAN10019313" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_process: GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA]" /codon_start=1 /product="Brefeldin A-inhibited guanine nucleotide-exchange protein 1" /protein_id="ELK02357.1" /db_xref="InterPro:IPR000904" /db_xref="InterPro:IPR015403" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q9Y6D6" /translation="MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEI KVETEKQSPPHGEAKAGSSTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDC LQKLIAYGHLTGNAPDSTTPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVT SQHIEIHEGTVLQAVRTCYNIYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAK QMEKERHRQQQHLLQSPVSQHEPESPHLRYLPPQTVDQISQEHEGELDPHTNDVDKNL QDDTEHENGSDISSAENEQTEADQATAAETLSKNDILYDGENHDCEEKPQDIVQSIVE EMVNIVVGDMGERTTINARTDGTIGAIEDGSDSENIQANGIPGTPVSVAYTPSLPDDR LSVSSNDTQESGNSSGPSPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHEL RSKILSLQLLLSILQNAGPVFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIF LTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDHKWMVIQTLTRICADAQSVVDIY VNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMV EWSKDQYVNPNSQTTLGQEKPSEQETSEIKHPETINRYGSLNSLESTSSSGIGSYSTQ MSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQE ERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKID RLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMN RGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQNVANEKQRRLLYNLE MEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEV ASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLI TVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGTKDQAP DEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRW LCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNE DVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQ MVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGNIVTLVFEKHFPATIDSF QDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSERPQAFKEYTSDDMNVAPEDRVW VRGWFPILFELSCVINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFD NMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNE QLARSGTNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGETAPP PTSPVSEKQLDTVSQKSVDIHDSIQPRSADIRQQVPLASVSTVNEDVNKIKPTAKYPE QKLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQ GMYRFLTSQQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAVGTVPAESPDPSPHTLG PSNQPPGEQPRCCVSGPVHRALLRAGRGFQCSSIWRRTLSQAKGFKGKSKPNLLKQET SSLACGLRILFRMYMDESRVSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLL LFLTKVLKISDNRFKAHASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQISKPP EQELGINKQ" assembly_gap 11001303..11001661 /estimated_length=359 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11020370..11020403 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11057044..11057271 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<11099349..>11166886) /locus_tag="PAL_GLEAN10019315" mRNA complement(join(<11099349..11099536,11109133..11109217, 11112823..11113025,11115593..11115643, 11166541..>11166886)) /locus_tag="PAL_GLEAN10019315" /product="Carboxypeptidase A6" CDS complement(join(11099349..11099536,11109133..11109217, 11112823..11113025,11115593..11115643,11166541..11166886)) /locus_tag="PAL_GLEAN10019315" /note="GO_function: GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Carboxypeptidase A6" /protein_id="ELK02358.1" /db_xref="InterPro:IPR000834" /db_xref="UniProtKB/Swiss-Prot:Q8N4T0" /translation="MEGRASQSLRAMIWLRGKVNLNSCLSPSVKLRLPKGHASSVAPL GLLTCCCLFYPENTATSFLLPHPLLFTWTTTSYSSNLSLSKKIAVSTLPDWIRTPHPT SNPSLLYAPIAHGYVILLNHLFLYDNINFLDEGASMHPCDDTYCGPFPESEPEVKAVA NFLRKHKKHIKAYLSFHAYAQMLLYPYSYKYATIPNFSCVESAAYKAVNALRSVYGVR YRYGPASSTLYVSSGSSMDWAYKTGIPYTFAFELRDTGHFGFLLPEMLIQPTCTETML AVKNITMHLLRKCP" assembly_gap 11150631..11150678 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11164648..11164685 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11199944..11199966 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11220314..11220381 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11231271..11232768 /estimated_length=1498 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11253510..11253546 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11256429..11256529 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11262446..11262532 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11269479..11269491 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11313645..11313747 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11319737..11319809 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11341719..11341789 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11344408..11344428 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11364672..11364738 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11365061..11365072 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11370348..11370357 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11406946..11406982 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11412284..11412294 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11454226..11455005 /estimated_length=780 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11491161..11491180 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11509224..>11670851 /locus_tag="PAL_GLEAN10019317" mRNA join(<11509224..11509280,11510818..11510940, 11513234..11513338,11519609..11519710,11522887..11523048, 11529994..11530127,11535147..11535250,11537725..11537874, 11548573..11548676,11549364..11549413,11552003..11552078, 11556410..11556482,11558698..11558840,11558995..11559087, 11560792..11560940,11564925..11565010,11569553..11569689, 11572049..11572169,11574191..11574375,11576595..11576756, 11586656..11586875,11587386..11587593,11593620..11593799, 11596482..11596516,11596928..11597010,11597692..11597782, 11598431..11598559,11608364..11608581,11612124..11612226, 11618260..11618403,11624752..11624866,11648056..11648122, 11648405..11648599,11658505..11658623,11667823..11667925, 11670756..>11670851) /locus_tag="PAL_GLEAN10019317" /product="Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein" CDS join(11509224..11509280,11510818..11510940, 11513234..11513338,11519609..11519710,11522887..11523048, 11529994..11530127,11535147..11535250,11537725..11537874, 11548573..11548676,11549364..11549413,11552003..11552078, 11556410..11556482,11558698..11558840,11558995..11559087, 11560792..11560940,11564925..11565010,11569553..11569689, 11572049..11572169,11574191..11574375,11576595..11576756, 11586656..11586875,11587386..11587593,11593620..11593799, 11596482..11596516,11596928..11597010,11597692..11597782, 11598431..11598559,11608364..11608581,11612124..11612226, 11618260..11618403,11624752..11624866,11648056..11648122, 11648405..11648599,11658505..11658623,11667823..11667925, 11670756..11670851) /locus_tag="PAL_GLEAN10019317" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]" /codon_start=1 /product="Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein" /protein_id="ELK02359.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR000591" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001849" /db_xref="UniProtKB/Swiss-Prot:Q70Z35" /translation="MNQCAASKVDKNVTDETVKMLFSNIEDILAVHKEFLKVVEECLH PEPNAQQEVGTCFLHFKDKFRIYDEYCSNHEKAQKLLLELNKIRTIRTFLLNCMLLGG RKNTDVPLEGYLVTPIQRICKYPLLLKELLKRTPRKHSDYAAVMEALQAMKAVCSNIN EAKRQMEKLEVLEEWQSHIEGWEGSNITDTCTEMLMCGVLLKISSGNIQERVFFLFDN LLVYCKRKHRRLKNSKASTDGHRYLFRGRINTEVMEVENVDDGTADFHSSGHIVVNGW KIHNTAKNKWFVCMAKTPEEKHEWFEAILKERERRKVTDKHQFKPEQMLYRFRYDDGT FYPRNEMQDVISKGVRLYCRLHSLFTPVIRDKDYHLRTYKSVVMANKLIDWLIAQGDC RTREEAMIFGVGLCDNGFMHHVLEKSEFKDEPLLFRFFADEEMEGSNMKHRLMKHDLK VVENVIAKSLLIKSNEGSYGFGLEDKNKVPIIKLVEKGSNAEMAGMEVGKKIFAINGD LVFMRPFSEVDCFLKSCLNSRKPLRVLVSTKPRETVKIPDSAEGLGFQIRGYGPSVVH AVGRGTVAAAAGLHPGQCIIKVNGINVSKETHASVIAHVTACRKYRRPMKQDSIQWVY NSIESAEEDLRQKSNSKSPGEEAGDAFDCKVEEVIDKFNTMAIIDGKKEHVSLTVDNV HLEYGVVYEYDSTAGIKCNVVEKMIEPKGFFSLTAKILEALAKSDDHFVQNCTSLNSL NEVIPTDLQSKFSAVCSEKIEHICQRISSYKKFSRVLKNRAWPTFKQAKSKISPLHSS DFCPTNCHINVMEVSYPKTSTSLGSAFGVQLDSRKHNSHDKENKSEQGKLSPMVYIQH TITTMAAPSGLSLGQQDGHGLRYLLKEEDLETQDIYQKLLCKLQTALKEVEMCVCQID DLLSSITYSPKLERKASESLVPLDSDNEKGERNSKRVCFNVAGDEQEDSGHDTISNRD SYREKMGRGWIGVGGDELPLSVRISHEKQDKLHSCLEHLFSQVDAITNLLKGQAVVRA FEQTKYLTPGRGLHEFQQEMEPKLSCPKRLRLHIKQDPWNLPSSVRSLAQNIRKFVED SDPQLRRDMVFCQSLVATVCAFSEQLMAALNQMFDNSKENEMETWEASRRWLDQIANA GVLFHFQSLLSPNLTDEQAMLEDTLVALFDLEKVSFFFRPSEEEPLVANVPLTYQVEG TRQALKVYFYIDTYHFEQLPQRLKNGGGFKIHPVLFAQALESMEGYYYRDNVSVEEFQ AQINAASLEKVKQYNQKLRAFYLDKSNSPPNSTSKAAYVDKLMRPLNALDELYRLVAS FIRSKRTAACVNTACSASGVGLLSVSSELCSRLGACHIIMCNSGVHRYRNKDKGVGFL KSPLTRGSFLNCLFVTNALLKVTEVGKINRCTLSVTVEQAIILARSHGLPPRYIMQAT DVMRKQVDLESSRKVSASLKPLSSICSQPHTPVLGSV" assembly_gap 11511619..11511678 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11538592..11538803 /estimated_length=212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11594525..11596370 /estimated_length=1846 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11654701..11654987 /estimated_length=287 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11672470..11672484 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11702629..11702664 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11721347..11721372 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11728636..11728672 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11730373..11730495 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11730788..11730829 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11762740..11762887 /estimated_length=148 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11772669..11772716 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11775534..>11821046 /locus_tag="PAL_GLEAN10019318" mRNA join(<11775534..11775687,11780709..11780840, 11787395..11787523,11789963..11790070,11793784..11793812, 11810851..11811023,11820863..>11821046) /locus_tag="PAL_GLEAN10019318" /product="hypothetical protein" CDS join(<11775534..11775687,11780709..11780840, 11787395..11787523,11789963..11790070,11793784..11793812, 11810851..11811023,11820863..11821046) /locus_tag="PAL_GLEAN10019318" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02360.1" /db_xref="UniProtKB/Swiss-Prot:Q49A92" /translation="LQELMTKLITETPEQPIPFLIDHLQSKQGNRGQLQRTLSGSAAL WAESETSELKGTRRDFRSYDKPWQLNTKKPKKSKSDLAVSNISPPSPESRSLPRSVDH SKWNWRTKPESRDFDELNHILQESKKLGKALENLSRKHTYVLQSAFHLSPAWTLSSLQ QAHSAPGRRCTELSGIAISDELDQETVAFNSSLLRPRVIGEWIGREENDADPLAAEML QPPIPRSKNEQWESEDSSPSPAGSLKVEPKTKGLKQQQQRHKKLLAAMLSQDSFESVH SPTPSVTEEDIDNEDDAMELLGNFKN" assembly_gap 11804252..11804372 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11805868..11805879 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11806717..11806755 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11841233..11841277 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11851651..11851770 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11860677..11860707 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11882172..11882228 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11894840..11894876 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11895742..11895793 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12015305..12015526 /estimated_length=222 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12045639..12045700 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12068383..12068512 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12135951..12136018 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12167097..12167179 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12170898..12170935 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12186596..12186609 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12227696..12228185 /estimated_length=490 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12233613..12233657 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12234344..12234370 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12290740..12290831 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12296617..12296701 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12324219..12324254 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12415561..12415585 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12476386..>12536080 /locus_tag="PAL_GLEAN10019320" mRNA join(<12476386..12476731,12485655..12485894, 12495767..12495918,12498228..12498397,12508813..12508963, 12510174..12510349,12511583..12511711,12511966..12512022, 12512808..12512937,12523782..12523998,12526041..12526293, 12527574..12527670,12528113..12528207,12528727..12528792, 12529691..12529863,12532137..12532279,12532376..12532499, 12535923..>12536080) /locus_tag="PAL_GLEAN10019320" /product="Extracellular sulfatase Sulf-1" CDS join(12476386..12476731,12485655..12485894, 12495767..12495918,12498228..12498397,12508813..12508963, 12510174..12510349,12511583..12511711,12511966..12512022, 12512808..12512937,12523782..12523998,12526041..12526293, 12527574..12527670,12528113..12528207,12528727..12528792, 12529691..12529863,12532137..12532279,12532376..12532499, 12535923..12536080) /locus_tag="PAL_GLEAN10019320" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Extracellular sulfatase Sulf-1" /protein_id="ELK02361.1" /db_xref="InterPro:IPR000917" /db_xref="InterPro:IPR017850" /db_xref="UniProtKB/Swiss-Prot:Q8IWU6" /translation="MPAYVPVLARLRPVFCNCVWGLDFISVSLSLAFSLAAQTCRHQE AETLCRFCDIGPNTMKSSCWVLVWAVLGAELLGSLCSTARSPRFRGRIQQERKNIRPN IILVLTDDQDVELGSLQVMNKTRKIMEHGGATFSNAFVTTPMCCPSRSSMLTGKYVHN HNVYTNNENCSSSSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWL GLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPVMMV ISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTN VLHRKRLQTLMSVDDSVERLYNMLVETGELENTYIIYTADHGYHIGQFGLVKGKSMPY DFDIRVPFFIRGPSVEPGSVVPQIVLNIDLAPTILDIAGLDPPPDVDGKSVLKLLDLE KPGNRFRTNKKAKIWRDTFLVERGKFLRKKEDSSKNIQQSNHLPKYERVKELCQQSRY QTACEQPGQKWQCIEDTSGKLRIHKCKGSGDLLPVRQSTRNLYSRGFHDKDKECSCGE SGYRASRSQRKSQRQFLRNQGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQA LRPRNIAKRHDEGRNGPGGRQAAGGADGDTMLAHSGNAVGLPTTVRVTHKCFILPNDT IHCERELYQSAKAWKDHKAYIDKEIEALQDKIKNLREVRGHLKRRKPDDCVCSKQSYY NKEKGVKKQEKLKSHLHPFKEAAQEVDSKLQLFKENRRRKKERKEKKRQRKGEECSLP GLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEY FDMNTDPYQLTNTVHTVERGVLNQLHVQLMELRSCQGHRQCNPRPKGLEVGPVRAESE FSSIESSLDRLKMKNVSLNYSEHLGHLPLSWTLPPPRNGAKCVV" assembly_gap 12505998..12507063 /estimated_length=1066 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12510059..12510085 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12537745..>12543811 /locus_tag="PAL_GLEAN10019321" mRNA join(<12537745..12537859,12542994..>12543811) /locus_tag="PAL_GLEAN10019321" /product="hypothetical protein" CDS join(12537745..12537859,12542994..12543811) /locus_tag="PAL_GLEAN10019321" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02362.1" /translation="MPWPEVVHFAAVEEQAGTEIQWTSQANWRSKMFFTPPEEDSYGM DGKVNLPSLPADVNWQGLEDLYGVNESIYEYRRNYRLSLVDWTNYLKDVDRVFALLNS HHEQNKANKSARSGGVSAVSAELSVPAEMASAESDADPSRTVGGAPHLTLPADLRTLH LNRPTFSPENKLEWNNDIPEVNHLNSEHWRNHKTDGWMEREETNHRETDFSGNGVAEL ALEPRPGLQPAGRPQKELPHDGGPGEDVFEDRLYLPVRSDVGPLHQTVQVSTLEEAVN SSSTDSKWNEVEESLGSGSLQTREGGTSFPLSSD" gene complement(<12556061..>12577670) /locus_tag="PAL_GLEAN10019322" mRNA complement(join(<12556061..12556437,12559242..12559306, 12561294..12561535,12563129..12563288, 12577582..>12577670)) /locus_tag="PAL_GLEAN10019322" /product="Solute carrier organic anion transporter family member 5A1" CDS complement(join(12556061..12556437,12559242..12559306, 12561294..12561535,12563129..12563288,12577582..12577670)) /locus_tag="PAL_GLEAN10019322" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Solute carrier organic anion transporter family member 5A1" /protein_id="ELK02363.1" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR011497" /db_xref="UniProtKB/Swiss-Prot:Q9H2Y9" /translation="MAPFPQLLEPSMSEPESPSSHQDTMRSGTRPSLTMPHRNLTGSC NVNCGCKIHEYEPVCGSDGITYFNPCLAGCVTSGNLSTGIRNYTECTCVQSRQVITPP TVGQRSQLHVVIVKTYLNENGYAVSGKCKRTCNTLIPFLIFLFIVTFITACAQPSAII VTLRSVEDEERPFALGMQFVLLRTLGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLA WYSMKYKEDALQRQTWREYPLGTVSEMVGHPDSANKYPRTRSCPVFSTQGEFREETGL QKGTQYTAQTYPGPFPEAISPSPDPGLEGSPAAT" assembly_gap 12556438..12556486 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12558786..12558809 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12562290..12562317 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12567387..12567970 /estimated_length=584 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12580434..12580470 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12596523..>12663336) /locus_tag="PAL_GLEAN10019323" mRNA complement(join(<12596523..12596590,12602789..12602953, 12614770..12614987,12619703..12619835, 12662427..>12663336)) /locus_tag="PAL_GLEAN10019323" /product="Solute carrier organic anion transporter family member 5A1" CDS complement(join(12596523..12596590,12602789..12602953, 12614770..12614987,12619703..12619835,12662427..12663336)) /locus_tag="PAL_GLEAN10019323" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Solute carrier organic anion transporter family member 5A1" /protein_id="ELK02364.1" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="UniProtKB/Swiss-Prot:Q9H2Y9" /translation="MDEGAGLQPQAGEQLEARAAVGAVQQESEPETFRSKSLPVLNRA SCRPDLSSVSVGAKPGCTDSLGHQELKQGLSPLAPSPSAPSTSAEMAGLADCNHRVDV GKTMSVSSTLAMLQGRRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERR YSLKSSESGLLVSCFDIGSLVVVVFVSYFGGRGRRPLWLAVGGLLIAAGAALFALPHF ISPPYQIQELNASASNEGLCQNGNSTVTLEPPHCLKDAGGNNHWVYVALFICAQILVG MGSTPIYTLGPTYLDDNVKKENASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNP VRLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVND DDVVKEKSNNSEQVDKKVSSMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAESAIVT AFITFIPKFIESQFGIPASNASIYTGLFSNSENSNLDWNQLSDFFLL" assembly_gap 12608702..12608864 /estimated_length=163 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12639130..12639184 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12651107..12651180 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12654393..12654415 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12664313..12665775 /estimated_length=1463 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12666676..12667122 /estimated_length=447 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12684531..12684543 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12706555..12706841 /estimated_length=287 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12729106..12729144 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12752948..12753077 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12754388..12755315 /estimated_length=928 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12766205..12766366 /estimated_length=162 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12772513..12772583 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12781345..12781400 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12786944..12786993 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12789963..12789987 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12796528..12796562 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12801263..>12813678) /locus_tag="PAL_GLEAN10019324" mRNA complement(join(<12801263..12801490,12803972..12804073, 12806987..12807189,12811001..12811271,12812139..12812296, 12812967..>12813678)) /locus_tag="PAL_GLEAN10019324" /product="PR domain zinc finger protein 14" CDS complement(join(12801263..12801490,12803972..12804073, 12806987..12807189,12811001..12811271,12812139..12812296, 12812967..12813678)) /locus_tag="PAL_GLEAN10019324" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="PR domain zinc finger protein 14" /protein_id="ELK02365.1" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q9GZV8" /translation="MALRPPGEAGPQDRMCFPPERLQSSPQHLTPYYTPFPSYGPYGS NLMAAEEDFQSFLQLEASVPASPAMPPFAFGTAPPFLSPGLALQREPLYDLPWHGKLP PWYPFPYFPKELQPFPNGGREDSREDPGATGKDLAYAGSRSDSGHYYEPEIFNPPPPV DTSLLPEGPKTSQLLPCLPSQQSEGGPKLPNEERTSHRYHFTQEDLHLVLYGVLPSQE RSTALHHAASGLLVPTDNSGLCFRQMLFGEVPHFGVFCCSLIAKGVRFGPFQGKVVNA SEVKAYGDNSLMWEIFEDGYLSHFIDGKGGAGNWMAYVNCARFPKEQNLVAVQCQGQI FYESCKEIYQNQELLVWYGDCYEKFLDIPVSLQVTEQGKRASGLSEESAEGYRCERCG KVFTYRYYRDKHLKYTPCVDKGDRKFPCSLCKRSFEKRDRLRIHILHVHEKHRPHKCS TCGKCFSQSSSLNKHMRVHSGDRPYQCVYCTKKFTASSILRTHIRQHSGEKPFKCKHC GKSFASHAAHDSHVRRSHKEDEACSCSTCGKTFPDQESLDPHVKVHDDC" assembly_gap 12806703..12806876 /estimated_length=174 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12814913..12815172 /estimated_length=260 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12830853..>12921538) /locus_tag="PAL_GLEAN10019325" mRNA complement(join(<12830853..12830934,12835591..12835781, 12837638..12837727,12839661..12839859,12840441..12840618, 12842238..12842472,12843818..12843895,12844854..12845132, 12848266..12848431,12854710..12854839,12857021..12857233, 12859884..12860090,12862129..12862339,12869075..12870332, 12871950..12872097,12875933..12876076,12876371..12876472, 12878874..12879062,12882056..12882233,12885692..12885795, 12918591..12918763,12921453..>12921538)) /locus_tag="PAL_GLEAN10019325" /product="Nuclear receptor coactivator 2" CDS complement(join(12830853..12830934,12835591..12835781, 12837638..12837727,12839661..12839859,12840441..12840618, 12842238..12842472,12843818..12843895,12844854..12845132, 12848266..12848431,12854710..12854839,12857021..12857233, 12859884..12860090,12862129..12862339,12869075..12870332, 12871950..12872097,12875933..12876076,12876371..12876472, 12878874..12879062,12882056..12882233,12885692..12885795, 12918591..12918763,12921453..12921538)) /locus_tag="PAL_GLEAN10019325" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003713 - transcription coactivator activity [Evidence IEA]; GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_function: GO:0035257 - nuclear hormone receptor binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Nuclear receptor coactivator 2" /protein_id="ELK02366.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR009110" /db_xref="InterPro:IPR010011" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR013767" /db_xref="InterPro:IPR014920" /db_xref="InterPro:IPR014935" /db_xref="UniProtKB/Swiss-Prot:Q15596" /translation="MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENK YIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDV SSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVY SILHVGDHTEFVKNLLPKSIVNGGSWSGEPPRRNSHTFNCRMLVKPFPDSEEEGHDHQ EAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDL QGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFS QIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMG KPLNPISSGSPAHQAMCSQDMTLGSNINFPINGPKEQMGMPMGRFGGSGGLNHVTGMQ ATAPQGSNYALRMNSPSQGSPGVNPGQPSSMLSPRHRVSPGLAGSPRIPPSQFSPAGS LHSPVGVCSSTGNSHSYTNSSLNALQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMN PPQLSKMGSLDSKDCFGLYGEPSESTTGQAESSCHPGEQKETNDSNIAQGVSSERSDG QNRLHDSKGQTKLLQLLTTKSDQMEPSPLSSSLSDTNKDSAGSLPGSGSTHGTSLKEK HKILHRLLQDSSSPVDLAKLTAEATGKELSQEASSTAPGSEVTVKQEPVSPKKKENAL LRYLLDKDDTKDIGLPEITPKLERLDSKTDPASNTKLIAMKSEKEEMSFEPSDQPGSE LDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDKQAIINDLMQLTAENSPVTPVGAQK AALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSPTGAGPFPPIRNSSPYSVIPQPG MMGNQGMIGNQGNLGSSSTGMIGSNAARPTMPSGDWAPQSSVRVTCAATTSAMNRPIQ GGMIRNPTASMPMRPSSQPGQRQMLQSQVMSIGPSELEMNMGGPQYSQQQAPPNQTAP WPDSILPIEQASFASQSRQPFGSSPDDLLCPHPAAESPSDEGALLDQLYLALRNFDGL EEIDRALGIPELVSQSQAVDPEQFSSQESTIMLEQKGPVFPQQYASQAQMAQGSYTPM QDPNFHAMGQRPSYATLRMQPRPGLRPAGLAQSQPNQLRLQLQHRLQAQQNRQPLMNQ ISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQQVQQRTLMMRG QGLTMTSSMVAPGGMPAAMSNPRIPQANAQQFPFPPNYGISQQPDPGFTGATTPQSPL MSPRMAHTQSPMMQQSQANPAYQASSDMNGWAQGSLGGSSMFSQQSPPHFGQQANTSM YSNNMNINVSMATNTGGMSNMNQMTGQISMTSVTSVPTSGLSSMGPEQVSDPALRGGS LFPNQLPGMDMIKQEGDASRLRQGREGCPQGQPQSSGAWSQQGGASEVRKGLCPRAQM RPAEAVWPPSLSRRGDWASGPASHSCQTIGLPSRDGKSEQMLARNSVTSSAR" assembly_gap 12863035..12863082 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12872661..12873430 /estimated_length=770 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12882357..12882405 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12980309..12980338 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12990617..12990631 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13013210..13013223 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13044104..13044357 /estimated_length=254 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13046880..13046913 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13055994..13056062 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13081802..13082836 /estimated_length=1035 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13131602..13131614 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13151572..13151699 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13179356..13179390 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13187459..>13191559 /locus_tag="PAL_GLEAN10019327" mRNA join(<13187459..13187635,13191344..>13191559) /locus_tag="PAL_GLEAN10019327" /product="40S ribosomal protein S3a" CDS join(13187459..13187635,13191344..13191559) /locus_tag="PAL_GLEAN10019327" /codon_start=1 /product="40S ribosomal protein S3a" /protein_id="ELK02367.1" /db_xref="UniProtKB/Swiss-Prot:P97351" /translation="MLMSRLPKVTCFVCVGFGNKSNEQILKTSDAQHQQVRQIRKETM EITPREGQTNDWEEVMSILSAPSTYTPRRNPDSLQQISPGNVKEVKTDVDELTGNVLL QAEDCVTDGSAETFQFPGLCGRMENVLL" assembly_gap 13189743..13190657 /estimated_length=915 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13193084..>13210102) /locus_tag="PAL_GLEAN10019328" mRNA complement(join(<13193084..13193443,13197988..13198072, 13199718..13199776,13201359..13201480,13202878..13202941, 13209980..>13210102)) /locus_tag="PAL_GLEAN10019328" /product="Translocating chain-associated membrane protein 1" CDS complement(join(13193084..13193443,13197988..13198072, 13199718..13199776,13201359..13201480,13202878..13202941, 13209980..13210102)) /locus_tag="PAL_GLEAN10019328" /codon_start=1 /product="Translocating chain-associated membrane protein 1" /protein_id="ELK02368.1" /db_xref="InterPro:IPR013599" /db_xref="UniProtKB/Swiss-Prot:Q01685" /translation="MAIRKKSTKSPPILSHEFILQNHADIVSCVAMVFLLGLMFEITA KAAVVFVTLQYNVTRPAAEEQATESASLYYYGIKDLATVFFYMLVAIIIHAIIQEYVL DENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWFHAFPELYFQKTKKLKCFIVYYL PSFCAVPAAYTPHFGEHAIRGMSDYADGPGTQLFRKDHRSGRAPLWLRAACGRDAFPA LPSRKERDFNGRLKIERKGSSDGLFSEVLFSPVGRATVNVASGLGTSPESPT" assembly_gap 13199860..13199871 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13209577..13209920 /estimated_length=344 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13216823..13216845 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13226986..>13250623) /locus_tag="PAL_GLEAN10019329" mRNA complement(join(<13226986..13227029,13227681..13227762, 13230531..13230679,13232535..13232713,13241177..13241303, 13245817..13245980,13250502..>13250623)) /locus_tag="PAL_GLEAN10019329" /product="Beta-lactamase-like protein 2" CDS complement(join(13226986..13227029,13227681..13227762, 13230531..13230679,13232535..13232713,13241177..13241303, 13245817..13245980,13250502..13250623)) /locus_tag="PAL_GLEAN10019329" /note="GO_function: GO:0016787 - hydrolase activity [Evidence IEA]" /codon_start=1 /product="Beta-lactamase-like protein 2" /protein_id="ELK02369.1" /db_xref="InterPro:IPR001279" /db_xref="UniProtKB/Swiss-Prot:Q1LZ83" /translation="MTTTLKHVEQLSSRVVRVLGCNPSPMTLQGTNTYLVGTGPRRIL IDTGESAVPEYIRYLKQTLADYNTAIQEILVTHWHRDHTGGIEDICKNISNDTTYCIK KLPRNPQRKEIIGSGELQYVYLKDGDVIKTEGASLRVIYTPGHTDDHMALLLKEENAL FSGDCILGEGTTVFEDLSDYMKSLKELLKIKADVIYPGHGPVIHDAEAKILQYISHRN TREEQILKMFHDNFEKSFTAMELVKTMYKNTPEVLHEKAKQNLLLHLKKLEKEGKIYS STDPIKKWKANL" assembly_gap 13238968..13239490 /estimated_length=523 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13244468..13244477 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13277603..13277645 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13299114..13299966 /estimated_length=853 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13326994..13329551 /estimated_length=2558 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13349476..13349557 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13357668..13357705 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13375197..13375244 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13376282..13376332 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13376669..13376680 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13390616..13390695 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13408147..13408159 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13438177..13438202 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13453352..13453364 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13457807..13457859 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13459141..13460159 /estimated_length=1019 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13472165..13472194 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13485696..13485738 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13490927..13490944 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13514079..13514106 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13535901..13536808 /estimated_length=908 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13554985..>13582037) /locus_tag="PAL_GLEAN10019331" mRNA complement(join(<13554985..13555065,13570811..13570911, 13574717..13574838,13574966..13575080, 13581854..>13582037)) /locus_tag="PAL_GLEAN10019331" /product="Eyes absent like protein 1" CDS complement(join(13554985..13555065,13570811..13570911, 13574717..13574838,13574966..13575080,13581854..13582037)) /locus_tag="PAL_GLEAN10019331" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Eyes absent like protein 1" /protein_id="ELK02370.1" /db_xref="InterPro:IPR005834" /db_xref="UniProtKB/Swiss-Prot:Q99502" /translation="MDQTKVGLSGSAKNNDRRDQKGRTAVRPESRERACPAARLRRRP CGALPAPSSRAACSRDTRLLGPAKREAWLQLRAEIEALTDSWLTLALKALTLIHSRTN CVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYV VIGDGVEEEQAAKKHAMPFWRISSHSDLMALHHALELEYL" assembly_gap 13576728..13576738 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13577901..13577983 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13579882..13579931 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13615040..>13709042) /locus_tag="PAL_GLEAN10019332" mRNA complement(join(<13615040..13615210,13618040..13618123, 13619468..13619607,13622581..13622656,13632318..13632427, 13644650..13644836,13654914..13655046,13657751..13657853, 13657944..13658126,13661723..13661791,13671542..13671619, 13691337..13691464,13708912..>13709042)) /locus_tag="PAL_GLEAN10019332" /product="Eyes absent like protein 1" CDS complement(join(13615040..13615210,13618040..13618123, 13619468..13619607,13622581..13622656,13632318..13632427, 13644650..13644836,13654914..13655046,13657751..13657853, 13657944..13658126,13661723..13661791,13671542..13671619, 13691337..13691464,13708912..13709042)) /locus_tag="PAL_GLEAN10019332" /codon_start=1 /product="Eyes absent like protein 1" /protein_id="ELK02371.1" /db_xref="UniProtKB/Swiss-Prot:Q99502" /translation="MFWSCLITVNPAWCQARVWLLRVALSNIMPDPTLQVLGPHRDLR SMEMQDLTSPHSRLSASSDSPSGPKLDNSHLSSNSMTPNGTEVKTEPMSSSEIVSTTS DGSLDNFSGSGMQQATAYATYPQPGQPYGISSYAFENEQIDKLSLTDLGALWAGIKTE GGLSQSQSPGQTGFLSYGTSFGTPQPGQAPYSYQMQDDGGKWTGLRGKIPDSAWTLTH SPSLSFHIYTIKRWSWSEVSQTCVAIQKALLGVLLPRRAATVQDIPVILQQASGYAVD YPSYPSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQEPPSGVTSQAVTD SAAGLLLIEFSEEAHISRDLFLHCAIKSHYPVPQLQEGQKFFSSLSAPSSVLTCLPGA HVDSLYTEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFI WDLDETIIVFHSLLTGSYANRYGRTTSSLDPLGLMLPSCSRSTSFVLDPHGQPVVSLS RQVLETLLRTLNHSLKHAGTLA" assembly_gap 13620050..13620156 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13652104..13652230 /estimated_length=127 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13698810..13698826 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13701645..13701669 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13748844..13748993 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13761723..13761757 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13768449..13769609 /estimated_length=1161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13774966..13775085 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13781179..13781234 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13781933..13781955 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13809357..13809392 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13842530..13842556 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13857604..13857680 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13866597..13866641 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13880731..13880787 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13885428..13885476 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13899949..13899968 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13936690..13936719 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13956950..13957023 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13982596..13982620 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13986489..13986993 /estimated_length=505 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14026874..14026930 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14037875..>14038174) /locus_tag="PAL_GLEAN10019337" mRNA complement(<14037875..>14038174) /locus_tag="PAL_GLEAN10019337" /product="Musculin" CDS complement(14037875..14038174) /locus_tag="PAL_GLEAN10019337" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Musculin" /protein_id="ELK02372.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="UniProtKB/Swiss-Prot:O60682" /translation="MRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLL QEDRYENGYVHPVNLVGVPGRAAGRCPRAPGRRAQPARWEEREREVLVRVVRRPV" assembly_gap 14038315..14038789 /estimated_length=475 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14044684..14044707 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14060083..14060109 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14100234..14100274 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14100953..14100968 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14109454..14109608 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14119260..14119539 /estimated_length=280 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14122602..14123283 /estimated_length=682 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14144625..14144954 /estimated_length=330 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14157407..>14199692) /locus_tag="PAL_GLEAN10019338" mRNA complement(join(<14157407..14157611,14158240..14158337, 14160619..14160732,14161191..14161259,14164936..14165065, 14166645..14166814,14172577..14172672,14174068..14174173, 14177365..14177531,14178464..14178581,14180198..14180362, 14180449..14180618,14181489..14181589,14182223..14182322, 14190527..14190634,14194562..14194737,14196912..14197071, 14199585..>14199692)) /locus_tag="PAL_GLEAN10019338" /product="Transient receptor potential cation channel subfamily A member 1" CDS complement(join(14157407..14157611,14158240..14158337, 14160619..14160732,14161191..14161259,14164936..14165065, 14166645..14166814,14172577..14172672,14174068..14174173, 14177365..14177531,14178464..14178581,14180198..14180362, 14180449..14180618,14181489..14181589,14182223..14182322, 14190527..14190634,14194562..14194737,14196912..14197071, 14199585..14199692)) /locus_tag="PAL_GLEAN10019338" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Transient receptor potential cation channel subfamily A member 1" /protein_id="ELK02373.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR020683" /db_xref="UniProtKB/Swiss-Prot:Q8BLA8" /translation="MKRSLRRMLRPAEKAPADVVYQGVEDGVHHSRDSFQVVFEGGAS ELHHCMKKQKKLRKYDDVDASPLHHAAEEGQVELMEMIVSDSPCEVLNVTDNYGNSPL HWAAVKNQAESVKFLLSKGANPNLQNSSMMAPLHLAVQGGHNEVVKVLTEHSSTDTNL EGENGNTALLIACFQDNSEALQMLGADINSTDSEGRSPLLLATASASWNIVNLLLSKG AHVDIKDHLGRNFLHLTVQQPYGLNSLRPEFMQMQHIKELVMDEDNDGCTPLHYACRQ GVPISVNNLLNFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDMSDTRLLNEGDLH GMTPLHLAAKNGHDKVVQLLLKKGALFVSDHNGWTALHHASLGGYTQTMKVILDTNLK STTDQPDEEGNTALHLAAREGHAKAVALLLSYDADVVLNKHHASFLHFAIHNKRKEVV LTTIRSKRAPGTTNRLLRNLLRPPGVETSSAFLVGPLQCAVLQIEYNFRYLQWPLECT KQASAQDVTYEPLTTLNKSTYFLDNNNVTEWIIYTTSIIFVSPLFVGIPAHVQWQCGA VAIHLYWMNFLLYLQRFENCGIFIVMLEVIMKTLLRSTVVFVFLLVAFGLSFYVLLSI QIGLAVGDIAEVQKHALLKRIAMQVELHTNLEKKLPLWFLRQVDQSSIIVYPNRPRCG GRILRIFHFLCRTQDSRQEIPNVDTSLEVEILKQKYRMKDLTSLVEKQHELIKLIIQK MEIISETEDEDNHSSFQDRYKKEQLEQRNSRWNSVLKAVKAKTQYP" assembly_gap 14168820..14168843 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14170026..14170070 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14171517..14171555 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14186714..14187364 /estimated_length=651 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14191688..14191753 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14207626..14207657 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14209174..14209928 /estimated_length=755 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14252732..14252746 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14256638..14256688 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14290014..14290050 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14292025..14294757 /estimated_length=2733 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14299331..14299418 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14332658..14332700 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14345183..14345216 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14346080..14346674 /estimated_length=595 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14352841..14353274 /estimated_length=434 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14355796..14356866 /estimated_length=1071 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14366244..14368339 /estimated_length=2096 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14375145..>14376140 /locus_tag="PAL_GLEAN10019339" mRNA <14375145..>14376140 /locus_tag="PAL_GLEAN10019339" /product="Potassium voltage-gated channel subfamily B member 2" CDS 14375145..14376140 /locus_tag="PAL_GLEAN10019339" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily B member 2" /protein_id="ELK02374.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003971" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/Swiss-Prot:A6H8H5" /translation="MAEKAPPGLNRKTSRSTLSLPPEPVDIIRSKTCSRRVKINVGGL NHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLSENEYFFDRHPGAFTSILNF YRTGKLHMMEEMCALSFGHELDYWGIDEIYLESCCQARYHQKKEQMNEELRREAETMR EREGEEFDNTCCPEKRKKLWDLLEKPNSSVAAKVRKARRGLAGAVGRGGARAPRVPVP SCVVIWGENTKRGDGDSGNCPVSFGRMALFGLCDSIPWHPSSMGVVPQDPPRRQEGGL PAPGGRTSGSRGCAQRRRGGAVREPGPRAALQRGDAASRFCSGAGQEARVWSPGA" assembly_gap 14383609..14383646 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14386001..14387337 /estimated_length=1337 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14426624..14427815 /estimated_length=1192 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14448667..14448702 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14479805..14479890 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14485838..14485857 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14499049..14499090 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14504753..14504773 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14522516..14522623 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14569200..14571411 /estimated_length=2212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14582237..14582259 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14582762..14582825 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14585595..14585629 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14587155..14587164 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14611351..14611760 /estimated_length=410 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14633381..14633403 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14649535..14649544 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14654571..14654638 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14661412..14661528 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14671361..14671586 /estimated_length=226 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14679526..14679538 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14679945..14679956 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14698194..14698373 /estimated_length=180 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14708483..>14734399 /locus_tag="PAL_GLEAN10019341" mRNA join(<14708483..14708789,14712302..14712397, 14717630..14717751,14719130..14719216,14721324..14721473, 14722209..14722318,14725100..14725159,14726674..14726762, 14729215..14729324,14734223..>14734399) /locus_tag="PAL_GLEAN10019341" /product="Telomeric repeat-binding factor 1" CDS join(14708483..14708789,14712302..14712397, 14717630..14717751,14719130..14719216,14721324..14721473, 14722209..14722318,14725100..14725159,14726674..14726762, 14729215..14729324,14734223..14734399) /locus_tag="PAL_GLEAN10019341" /note="GO_component: GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0042162 - telomeric DNA binding [Evidence IEA]; GO_process: GO:0007004 - telomere maintenance via telomerase [Evidence IEA]" /codon_start=1 /product="Telomeric repeat-binding factor 1" /protein_id="ELK02375.1" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR013867" /db_xref="InterPro:IPR014778" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/Swiss-Prot:P54274" /translation="MAEDAAVAAPSPRGRADGQDAGPSEKRLPEAEREDQEQFECQEL LECQVETGVPEGEEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDSRFEDFHRTRDSAE AIIHGLSSLTAYQLKTIYICQFLTRIAAGKSLDAQFETDERITPLESALMIWASIEKE HDKLHEEIENLIKIQAIAVCIESGDFKEAEEVFERIFGDSDSNTPLRRKLLMVISQKD AFHSFFQHFSYNHMMEKIKSFVNCVLKEKSSAFLMKAAAKVVESKRARTTAYPDKPDS DSDAGTEANLDVGRSVNDKPSAVTESSDDTVSLLRSHRNLFLSKSQHGRQQGLNEKEE RAETSQSRGKRKDNSRQAIESKRVHALNNQPATSKNHRSRKKQAWLWEEDKNLKSGVR KYGEGNWSQILLHYKFNNRTSVMLKDRWRTMKKLKLICSDNED" gene complement(<14741020..>14825430) /locus_tag="PAL_GLEAN10019342" mRNA complement(join(<14741020..14741137,14742884..14743060, 14744631..14744721,14750603..14750797,14751779..14751849, 14758088..14758225,14825381..>14825430)) /locus_tag="PAL_GLEAN10019342" /product="RPE-spondin" CDS complement(join(14741020..14741137,14742884..14743060, 14744631..14744721,14750603..14750797,14751779..14751849, 14758088..14758225,14825381..14825430)) /locus_tag="PAL_GLEAN10019342" /codon_start=1 /product="RPE-spondin" /protein_id="ELK02376.1" /db_xref="InterPro:IPR000884" /db_xref="UniProtKB/Swiss-Prot:Q32L50" /translation="MPADRFIPGTALSILGRYLGPLVKPVHYGRFSHSAVSHEGFTYT LKENTEFLNLKRCAVDCIWGSYVLPNHVSFKSHEPLERAQRQTRPCIVGSWSPWSGCA DQCKPTARVRRRPVQQEPRNGGAPCPALEERAGCLQYSTPQGRACGHAFVPAFITTSA FNKERARQAASPQWSTRTQDAGYCMEFKTESLTHHCAMENRPLTRWMQYLREGYTVCV DCQPPAMNSVSLRCSGDGLDSDGNQTLHWQAIGNPRCQGTWKKVRRVDQCTCPAVHSF IFI" assembly_gap 14759776..14760042 /estimated_length=267 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14767413..14767504 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14772218..14772328 /estimated_length=111 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14796422..14796459 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14803642..14805522 /estimated_length=1881 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14838090..>14846583) /locus_tag="PAL_GLEAN10019344" mRNA complement(join(<14838090..14838238,14843267..14843423, 14846467..>14846583)) /locus_tag="PAL_GLEAN10019344" /product="hypothetical protein" CDS complement(join(14838090..14838238,14843267..14843423, 14846467..14846583)) /locus_tag="PAL_GLEAN10019344" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02377.1" /translation="MCQNAIFTRIAELPKKREFLSTSGSPQTAVCGHGDTPSQRVSLG AALVPYCTSENERTLGLRRGDFMITCDFRVKRTKETCPVVPLQEKSKGSVFSNPLPGA PSQYLQRLSKMAILEYETIRQETTRKSKKGRKRDLRDC" assembly_gap 14854996..14855814 /estimated_length=819 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14861659..14861724 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14862572..14862844 /estimated_length=273 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14865137..14865149 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14866896..>14869471) /locus_tag="PAL_GLEAN10019346" mRNA complement(join(<14866896..14867104,14867299..14867408, 14867532..14867669,14868195..14868361,14868620..14868725, 14869458..>14869471)) /locus_tag="PAL_GLEAN10019346" /product="60S ribosomal protein L7" CDS complement(join(14866896..14867104,14867299..14867408, 14867532..14867669,14868195..14868361,14868620..14868725, 14869458..14869471)) /locus_tag="PAL_GLEAN10019346" /note="GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="60S ribosomal protein L7" /protein_id="ELK02378.1" /db_xref="InterPro:IPR012988" /db_xref="InterPro:IPR016082" /db_xref="UniProtKB/Swiss-Prot:Q5R9R4" /translation="MEAAEEKKKVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKA RRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSP KVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGK INKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGG MKKKTTHFVEGGDAGNREDQINRLIRRMN" assembly_gap 14870546..14871036 /estimated_length=491 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14871160..>14896019 /locus_tag="PAL_GLEAN10019347" mRNA join(<14871160..14871436,14873164..14873399, 14894163..14894308,14895668..14895799,14895896..>14896019) /locus_tag="PAL_GLEAN10019347" /product="Retinol dehydrogenase 10" CDS join(14871160..14871436,14873164..14873399, 14894163..14894308,14895668..14895799,14895896..14896019) /locus_tag="PAL_GLEAN10019347" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Retinol dehydrogenase 10" /protein_id="ELK02379.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="UniProtKB/Swiss-Prot:Q8IZV5" /translation="MNIVVEFFVVTFKVLWAFVLAAARWLVRPXXXXXPGVPGAGSGL GRLFALEFARRRALLVLWDINTQSNEETAGMVRHIYRDLEAADAAALQAGNGEEEILP HCNLQVFTYTCDVGKRENVYLMAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIER TMMVNCHAHFWDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGMFRGCR IRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEAVVCMYR FLGADKCMYPFIAQRKQATNNNEAKNGI" assembly_gap 14871248..14871261 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14880889..14880938 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14899285..14899333 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14946096..14946270 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14954651..>14955911) /locus_tag="PAL_GLEAN10019348" mRNA complement(join(<14954651..14954744,14955871..>14955911)) /locus_tag="PAL_GLEAN10019348" /product="Double-stranded RNA-binding protein Staufen like protein 2" CDS complement(join(14954651..14954744,14955871..14955911)) /locus_tag="PAL_GLEAN10019348" /codon_start=1 /product="Double-stranded RNA-binding protein Staufen like protein 2" /protein_id="ELK02380.1" /db_xref="UniProtKB/Swiss-Prot:Q68SB1" /translation="MEGTMNIEKGSLEKQGQHLGEKADNKQTHPASITQDGKKSKSVI " assembly_gap 14959095..14959291 /estimated_length=197 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14960002..14960052 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14964606..14964648 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14970757..14970931 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14999756..14999785 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15012214..15012244 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15022544..15022570 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15061856..>15157371) /locus_tag="PAL_GLEAN10019349" mRNA complement(join(<15061856..15062166,15084815..15084875, 15090306..15090437,15097315..15097452,15103375..15103587, 15105650..15105757,15107030..15107189,15139600..15139735, 15148055..15148214,15157258..>15157371)) /locus_tag="PAL_GLEAN10019349" /product="Double-stranded RNA-binding protein Staufen like protein 2" CDS complement(join(15061856..15062166,15084815..15084875, 15090306..15090437,15097315..15097452,15103375..15103587, 15105650..15105757,15107030..15107189,15139600..15139735, 15148055..15148214,15157258..15157371)) /locus_tag="PAL_GLEAN10019349" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003725 - double-stranded RNA binding [Evidence IEA]" /codon_start=1 /product="Double-stranded RNA-binding protein Staufen like protein 2" /protein_id="ELK02381.1" /db_xref="InterPro:IPR001159" /db_xref="UniProtKB/Swiss-Prot:Q68SB1" /translation="MANPREKTPMCLVNELARFSRVQPQYKLLKERGPAHSKMFSVQL SLGEQTWEAEGSSIKKAQQAVASKALTESTLPRPVQKPPKSNVNNNPGSITPTVELNG LAMKRGEPAIYRPLDPKPFPSYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGE GKTRQAARHNAAMKALQALQNEPLPEKSPQNGESGKDMDDDKDANKSEISLVFEIALK RNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELRKLP PLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNPISRLAQIQQAKKDKEPDYVLLSERGM PRRREFVMQVKVGSEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDQLDKTGENK GWSGPKAGFPEPTNNTPKGILHLSPDVYQEMEASRHKVISGTTLGYLSPKDMNQPSSS FFSISPSSNSSATVARELLMNGTSTAEAIGLKGSSPTPPCSPVQPSKQLEYLARIQGF QV" assembly_gap 15073525..15073582 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15084618..15084649 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15127618..15127648 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15128955..15128991 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15145673..15145754 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15167342..15167354 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15170945..15170971 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15172756..15172770 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15173067..15174255 /estimated_length=1189 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15178867..15178891 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15186567..15186728 /estimated_length=162 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15209931..>15229348) /locus_tag="PAL_GLEAN10019350" mRNA complement(join(<15209931..15210056,15213789..15213944, 15223752..15223854,15229308..>15229348)) /locus_tag="PAL_GLEAN10019350" /product="Putative ubiquitin-conjugating enzyme E2 W" CDS complement(join(15209931..15210056,15213789..15213944, 15223752..15223854,15229308..15229348)) /locus_tag="PAL_GLEAN10019350" /note="GO_function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO_process: GO:0043687 - post-translational protein modification [Evidence IEA]" /codon_start=1 /product="Putative ubiquitin-conjugating enzyme E2 W" /protein_id="ELK02382.1" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="UniProtKB/Swiss-Prot:Q96B02" /translation="MTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPF DSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRR PPDNSFYVRTCNKNPKKTKWWYHGKQFYFRIITVFSILV" assembly_gap 15231853..15231888 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15237482..15237499 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15243051..15243696 /estimated_length=646 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15260567..>15275205) /locus_tag="PAL_GLEAN10019351" mRNA complement(join(<15260567..15260757,15264984..15265127, 15274989..>15275205)) /locus_tag="PAL_GLEAN10019351" /product="Transcription elongation factor B polypeptide 1" CDS complement(join(15260567..15260757,15264984..15265127, 15274989..15275205)) /locus_tag="PAL_GLEAN10019351" /note="GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]" /codon_start=1 /product="Transcription elongation factor B polypeptide 1" /protein_id="ELK02383.1" /db_xref="InterPro:IPR001232" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR016073" /db_xref="UniProtKB/Swiss-Prot:P83941" /translation="MLLGPRSSSLRTPSPWKLDWGRCCMLGIRRPGSGLVEICRDRCP PTLACGAVGLGKERGAAQFPWTEAGDKLNGEEKTYGGCEGPDAMYVKLISSDGHEFIV KREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTE IPEFPIAPEIALELLMAANFLDC" gene <15279560..>15285831 /locus_tag="PAL_GLEAN10019352" mRNA join(<15279560..15280225,15281310..15281415, 15285374..>15285831) /locus_tag="PAL_GLEAN10019352" /product="Transmembrane protein 70, mitochondrial" CDS join(15279560..15280225,15281310..15281415, 15285374..15285831) /locus_tag="PAL_GLEAN10019352" /codon_start=1 /product="Transmembrane protein 70, mitochondrial" /protein_id="ELK02384.1" /db_xref="InterPro:IPR009724" /db_xref="UniProtKB/Swiss-Prot:A6H773" /translation="MVALNYHSFLCKSYKVLFLSTKRLESFSATKIVSGSYKTTTKKK GLSLASRLCPSRTALPSALAHCHTEPRTPRAGRAFAPFAGLGAGAAPRSSPARNASAA AGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXRGPRAAVSRAASCSGSWGPVGRRSTGLRATAPLLPRP VRAQIPVCWERCIRCLHTQVEKSEDGRLIYTGNLARAVFGVKCFSYSTSVISLAVLPY IFAQSNIIFGSLPLQVLFYGVIGSFTLITPALLHFVTKGYVIRLYHEATTDTYKAITY NVVLLEKSTVFHQNDVKIPSSAHLFTTFYAKTKSLLVNPGLFPNPEDYDHLMGYDKPF TFDMEETSEKKQVKDEK" assembly_gap 15279879..15280101 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15290767..>15305856 /locus_tag="PAL_GLEAN10019353" mRNA join(<15290767..15290878,15296678..15296767, 15304984..15305036,15305758..>15305856) /locus_tag="PAL_GLEAN10019353" /product="Lymphocyte antigen 96" CDS join(15290767..15290878,15296678..15296767, 15304984..15305036,15305758..15305856) /locus_tag="PAL_GLEAN10019353" /codon_start=1 /product="Lymphocyte antigen 96" /protein_id="ELK02385.1" /db_xref="UniProtKB/Swiss-Prot:Q9Y6Y9" /translation="MFPFMLFSTLFSPIFTEPAEQHWICNSSDTDIWYTYCDNMKFPI SLNLNPCIELKGSRGYLHIFYIPKTVNTTISFSFKGIRFSKGQYRCIVEAITGYTEEK LFCLNFTIIYHPDFN" assembly_gap 15311663..15311697 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15327235..15327259 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15340112..15340124 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15369376..15369677 /estimated_length=302 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15399466..15399483 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15413866..15413916 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15426757..>15459414) /locus_tag="PAL_GLEAN10019355" mRNA complement(join(<15426757..15426837,15433263..15433909, 15459291..>15459414)) /locus_tag="PAL_GLEAN10019355" /product="Junctophilin-1" CDS complement(join(15426757..15426837,15433263..15433909, 15459291..15459414)) /locus_tag="PAL_GLEAN10019355" /codon_start=1 /product="Junctophilin-1" /protein_id="ELK02386.1" /db_xref="UniProtKB/Swiss-Prot:Q9HDC5" /translation="MRCGRNSRLCPSGQGQNRFPHTSFRLESRTMLSEDLEYFVDRPD YIKQRSQEGIDAKENPEEKVPEKPPTPKESPHFYRKGTTPPRSPEASLKQSHSPPPSP KPTRKQNPSSGARLNRDKRSVADEQVAAVVNKPLMAKAPSKEAGAAAPSSKYSGRHHV PNPSNGELHSQYHGYYVKLNAPKHPPEDGEEDGGSSHPSSALVHKPSPNKWSPPKSVT KPVAKESKAEPKAKKSELAIPKNQASNDSCPPSEKEANSGPNSVMIVLVMLLNIGLAI LFVHFLT" assembly_gap 15429725..15429769 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15439651..15440406 /estimated_length=756 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15460995..15461010 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15477613..15477638 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15483090..15483365 /estimated_length=276 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15490939..>15491607) /locus_tag="PAL_GLEAN10019356" mRNA complement(<15490939..>15491607) /locus_tag="PAL_GLEAN10019356" /product="Junctophilin-1" CDS complement(15490939..15491607) /locus_tag="PAL_GLEAN10019356" /codon_start=1 /product="Junctophilin-1" /protein_id="ELK02387.1" /db_xref="InterPro:IPR003409" /db_xref="UniProtKB/Swiss-Prot:Q9GKY8" /translation="MKMRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDC DFGPAEDHVDATTTETYLGEWKSDKRSGFGVSERSNGMKYEGEWASNKRHGYGCTVFP DGSREEGKYKNNVLVRGVRKQLIPIRNAKTREKVDRAIEGAQRAAAMARTKVEIANSR YGKRAGRRFCGVACYVCQCVGDIGTQGPLPLRSQRRQTIKPSRMRVGNGPAQPSNLPS SESR" assembly_gap 15491727..15491883 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15497080..>15497592) /locus_tag="PAL_GLEAN10019357" mRNA complement(<15497080..>15497592) /locus_tag="PAL_GLEAN10019357" /product="Junctophilin-1" CDS complement(15497080..15497592) /locus_tag="PAL_GLEAN10019357" /codon_start=1 /product="Junctophilin-1" /protein_id="ELK02388.1" /db_xref="InterPro:IPR003409" /db_xref="UniProtKB/Swiss-Prot:Q9HDC5" /translation="MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSH GFEVVGGYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCT PARYEGTWSNGLQDGYGVETYGDGGERRRGGLGGGRGQDAGRTRPETRQNTWAASRAR PAPAPSHGAR" assembly_gap 15497640..15498047 /estimated_length=408 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15517767..15518159 /estimated_length=393 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15523924..>15539943 /locus_tag="PAL_GLEAN10019358" mRNA join(<15523924..15524040,15525304..15525496, 15536098..15536271,15537397..15537491,15538320..15538434, 15539561..>15539943) /locus_tag="PAL_GLEAN10019358" /product="Ganglioside-induced differentiation-associated protein 1" CDS join(15523924..15524040,15525304..15525496, 15536098..15536271,15537397..15537491,15538320..15538434, 15539561..15539943) /locus_tag="PAL_GLEAN10019358" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Ganglioside-induced differentiation-associated protein 1" /protein_id="ELK02389.1" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR012336" /db_xref="InterPro:IPR017933" /db_xref="UniProtKB/Swiss-Prot:Q8TB36" /translation="MARVQGEQRGGAPLMAEGQSGAEVKLILYHWTHSFSSQKVRLVI AEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTFL DEKTPRLMPEKGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRI RSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQ VETELQRRNEETPEEGRQPWLCGGSFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNL ETYYDRVLKRKTFNKVLGHVNNILISAVLPTAFRVARKRAPKVLGTTLAVGLLAGVGY LGFMLFRKRLGSMILALRPRPNYF" assembly_gap 15527776..15527798 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15538459..15538606 /estimated_length=148 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15565625..15565634 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15588045..15588136 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15598833..15599680 /estimated_length=848 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15626430..15627573 /estimated_length=1144 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15685357..15685383 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15704793..15704825 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15707824..15707833 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15715106..15715295 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15757073..15757116 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15761481..15761511 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15765043..15765104 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15838564..>15861023 /locus_tag="PAL_GLEAN10019361" mRNA join(<15838564..15838836,15856410..15856528, 15857468..15857566,15860888..>15861023) /locus_tag="PAL_GLEAN10019361" /product="Peptidase inhibitor 15" CDS join(15838564..15838836,15856410..15856528, 15857468..15857566,15860888..15861023) /locus_tag="PAL_GLEAN10019361" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]" /codon_start=1 /product="Peptidase inhibitor 15" /protein_id="ELK02390.1" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR014044" /db_xref="UniProtKB/Swiss-Prot:O43692" /translation="MTAISAVSSAVLLSLLCEASAVVLLNSTDSSSPTNNFTDIEAAL TAQLDSADIPKARRKRYISQNDMIAILDYHNQVRGKVFPPAANMEYMVWDENLAKSAE AWAATCIWDHGPSYLLRFLGQNLSVRTGRYRSILQLVKPWYDEVKDYAFPYPQDCNPR CPMRGNWIGEAPYKVGVPCSACPPSYGASCTDNLCFPGVTSNYLYWFK" assembly_gap 15850940..15851162 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15873646..15874078 /estimated_length=433 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15904481..15904570 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15941709..15942213 /estimated_length=505 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15943285..>15980107 /locus_tag="PAL_GLEAN10019362" mRNA join(<15943285..15943542,15962668..15962786, 15963123..15963255,15964228..15964343,15965065..15965165, 15966804..15966944,15967120..15967180,15967289..15967355, 15967557..15967687,15969387..15969430,15969524..15969596, 15973082..15973157,15977406..15977641,15979990..>15980107) /locus_tag="PAL_GLEAN10019362" /product="Cysteine-rich secretory protein LCCL domain-containing 1" CDS join(15943285..15943542,15962668..15962786, 15963123..15963255,15964228..15964343,15965065..15965165, 15966804..15966944,15967120..15967180,15967289..15967355, 15967557..15967687,15969387..15969430,15969524..15969596, 15973082..15973157,15977406..15977641,15979990..15980107) /locus_tag="PAL_GLEAN10019362" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]" /codon_start=1 /product="Cysteine-rich secretory protein LCCL domain-containing 1" /protein_id="ELK02391.1" /db_xref="InterPro:IPR001283" /db_xref="InterPro:IPR004043" /db_xref="InterPro:IPR014044" /db_xref="UniProtKB/Swiss-Prot:Q9H336" /translation="MKCTAQEWLRVTTVLFMARAIPAMVVPNATLLEKLLEKYMDEDG EWWTAKQRGKRAITDNDMQSILDLHNKLRSQVYPTASNMEYMTWDVELERSAESWAET CLWEHGPASLLPSIGQNLGAHWGRYRPPTFHVQAWYDEVRDFTYPYEHECNPYCPFRC SGPVCTHYTQVVWATSSRIGCAINLCHNMNIWGQIWPKAVYLVCNYSPKGNWWGHAPY KHGRPCSACPPSFGGGCRENLCYKEGSDRYYTPREEETNEIERQQSQVHDAHIRTRAD DSNANEVISMQQMSQIVSCEVRLRDQCKGTTCNRYECPAGCLDSKAKVIGSVHYEMQS SICRAAIHYGIIDNDGGWVDITRQGRKHYFIKSNRNGVQTIGKYQSANSFTVSKVTVQ AVTCETTVEQLCPFHKPASHCPRVYCPRNCMQANPHYARVIGTRVYSDGTHIRIGVSA VGPIEGSAGQGQQESPNGSFFASLQLSSICRAAVHAGVVRSHGGYVDVMPVDKRKTYT ASFQNGIFSERILQEERHSEYLLLCDMERLEEDRNDCSKCHISKVCIKL" assembly_gap 15987785..15987812 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15998840..15998857 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16125968..16126173 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16154073..16154288 /estimated_length=216 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16155218..16164068 /estimated_length=8851 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16164884..16165232 /estimated_length=349 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16168606..16168644 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16200210..16200784 /estimated_length=575 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16248213..16248252 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <16266694..>16287839 /locus_tag="PAL_GLEAN10019366" mRNA join(<16266694..16266814,16269602..16269776, 16271642..16271733,16276000..16276106,16277632..16277787, 16280816..16280903,16282727..16282879,16283005..16283241, 16284165..16284287,16287718..>16287839) /locus_tag="PAL_GLEAN10019366" /product="Hepatocyte nuclear factor 4-gamma" CDS join(16266694..16266814,16269602..16269776, 16271642..16271733,16276000..16276106,16277632..16277787, 16280816..16280903,16282727..16282879,16283005..16283241, 16284165..16284287,16287718..16287839) /locus_tag="PAL_GLEAN10019366" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO_function: GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Hepatocyte nuclear factor 4-gamma" /protein_id="ELK02392.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR003068" /db_xref="InterPro:IPR008946" /db_xref="UniProtKB/Swiss-Prot:Q14541" /translation="MDMANYSEVLDPTYTTLEFETMQILYNANGEFSSAWKYEKPDSS APETTSMNTADNGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRYLV HPPEPQLCIPNEFCSFLPLKYIFLLHSTVQNERDRISTRRSTFDGSNIPSINTLAQAE VRSRQISASSPGTSTDINVKKIASISEVCESMKQQLLVLVEWAKYIPAFCELPLDDQV ALLRAHAGEHLLLGATKRSMVYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPF QEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRF GELLLLLPTLQSVTWQMIEQIQFVKLFGMVKIDNLLQEMLLGGASSDVSHLHHPMHPH LSQDPLTGQTILLGPMSSLVHTDQISTPETPLPSPPQGSGQEQFKMAANQASVISHQS LSKQKRL" assembly_gap 16273362..16273374 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16286025..16286044 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16388405..16388514 /estimated_length=110 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16397469..16397523 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16418787..16418818 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16423949..16423964 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16523156..16523172 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16535400..16535434 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16544791..16545000 /estimated_length=210 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16601697..16601740 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16671820..16671986 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16674520..16674552 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16709351..16709381 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16715180..16715201 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16719087..16719316 /estimated_length=230 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16723230..16723245 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16876482..16876532 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16897663..16897682 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16898836..16898875 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16901660..16901669 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16933337..16933352 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16936758..16937030 /estimated_length=273 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16940956..16941048 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16945111..16945285 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16945894..16946245 /estimated_length=352 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16961723..16961742 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <16966623..>16968199 /locus_tag="PAL_GLEAN10019367" mRNA join(<16966623..16968077,16968134..>16968199) /locus_tag="PAL_GLEAN10019367" /product="Zinc finger homeobox protein 4" CDS join(16966623..16968077,16968134..16968199) /locus_tag="PAL_GLEAN10019367" /codon_start=1 /product="Zinc finger homeobox protein 4" /protein_id="ELK02393.1" /db_xref="UniProtKB/Swiss-Prot:Q86UP3" /translation="METCDSAPISRQENGQSTSKLCGTTQVDNEVPEKVAGMESDREN SSTDDNLKTEEHPSDVLLGFGVENAAATQVTSAKEIPCNECATSFPSLQKYMEHHCPN ARLPVLKDDNESEVSELEDSDVENLTGEIVYQPDGSAYIIEDSKESGQNAPTGANSKL FSAAVFLDSLAAAGEKGDQAASAPMSFYPQIINTFHIASSLGKTFTADQAFPNTSALA GVGPVLHSFRVYDLRHKREKDYLTSDGSAKNSCVSKDVPNNVDLSQFDGCVSDGKRKP VLMCFLCKLSFGYIRSFVTHAVHDHRMTLNDEEQKLLGSKCVSAIIQGIGKDKEPLIS FLEPKKSTSVYPHFSTPNLIGPDPTFRGVWSAFHVENGDSLPAGFAFLKGSAGAPSPA EPPRGVAPMPKAEVSLGALSSLVVNAPLTSVSLSHAPSESCKLSQSQNPEDNGDRPRE RPVKSEPPDAGDEDDDDAYSNDLDDEEVLGELADSRAKIQRQGRLVLRGHRLGRRG" assembly_gap 16968219..16968436 /estimated_length=218 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <16968528..>17109355 /locus_tag="PAL_GLEAN10019368" mRNA join(<16968528..16969224,16970097..16970599, 17033720..17033951,17085071..17085139,17091413..17091529, 17097818..17097951,17098184..17098384,17099200..17099317, 17099842..17101763,17102133..17105304,17109297..>17109355) /locus_tag="PAL_GLEAN10019368" /product="Zinc finger homeobox protein 4" CDS join(16968528..16969224,16970097..16970599, 17033720..17033951,17085071..17085139,17091413..17091529, 17097818..17097951,17098184..17098384,17099200..17099317, 17099842..17101763,17102133..17105304,17109297..17109355) /locus_tag="PAL_GLEAN10019368" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Zinc finger homeobox protein 4" /protein_id="ELK02394.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q86UP3" /translation="MTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCV YCKTGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNG NGEQVFGHSAPAPNASLGGCGTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKH MHNMMLLQQNMKQIQHNLHLGLAPAEAELYQYYLAQNIGLTGMKLENPADAQLMINPF QLDPATAAALAPGLVNNELPPEIRLASGQLMGDDLSLLTAGELSPYISDPALKLFQCA VCNKFTSDSLEALSVHVSGERSLPEEEWRAVIGDIYQCKLCNYNTQLKANFQLHCKTD KHMQKYQLVAHIKEGGKSNEWRLKCIAIGNPVHLKCNACDYYTNSVDKLRLHTTNHRH EAALKLYKHLQKQESAVNPESCYYYCAVCDYSTKVKLNLVQHVRSVKHQQTAGLRKLQ LHQQGLAPEEDNLTETFFVKDSPPHELETASLGARACEDDLTEQQLRASSEEQSEEAE GAIKPTSVAEEDEKDSSERETSEGKTSNKDSGIITPEKELKVSVAGVTQPLLLAKEED VATKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQHSVQPVICCPLCQDVL SNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSLLLPAAASEKSERDTPAAIT AEGSGKYSGDSPVDDRSMAGLDDSKASVEIKSEEQKPTKEPVEVSEWNKTSSKDAKPP EALQEPLSEQQKRQPLSVSERHVYKFRCNHCSLAFKTMQKLQIHSQYHAIRAATMCNL CQRSFRTFQALKKHLEAGHPELSEAELQQLYASLPVNGELWAEGETVAQDEHALEQEM EREYEVDHEGKASPIGSDSSSIPDDMGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTV CKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPPDSNGSADNKPYKCGTCNVAYS QSSTLEIHMRSVLHQTKARAAKLEPGGPTAGGHGIAANVNSPGQGVLDSMSLAAVSSK DTHLDAKELNKKQSPDLLPAQPAHHAPQSPAQIQMQLQHELQQQAAFFQPQFLNPAFL PHFPMTPEALLQFQQPQFLFPFYIPGTEFSLGPDLGLPGSAAFGMPGMAGMAGSLLED LKQQIQTQHHVGQTQLQILQQQAQQYQATQAPLQPQKQPPPPPPAPTPQQQAQPPQAG KLLKQDQTNLASADGPVPKDAPPYKDPEEAADKQEKPKQDFLSEGEGLKEGSKDTKKP KPSEPSIPPPRIASGARGNAAKALLENFGFELVIQYNENRQKVQKKHRSADGDSADKL ECGTCGKLFSNVQLPVSLDLPLFPSIMMQPVQHPALPPQLALQLPQMDTLSADLTQLC QQQLGLDPNFLRHSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQK VIKHWFRNTLFKERQRNKDSPYNFSNPPITVLEDIRIDPQPSSLEHYKSDASFSKRSS RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYEN QAETKDNEKRELTNERYIRTSNMQYQCKKCNVVFPRIFDLITHQKKQCYKDEDDDAQD ESQTEDSMDATDQVVYKHCAAAGQTDAAKNAAVPAAGSGSGTSTPLIPSPKPEPEKTS PKPEYPPEKPKQSDPSPASQGTKPALPLTSTSSDPPQASAAQPQPPKQTQLMGRPPSA TQTPVPSSPLQISMTSLQNSLPPQLLQYQCDQCTVAFPSLELWQEHQHMHFLAAQNQF LHSPFLERPMDMPYMIFDPNNPLMTGQLLGGSLSQMPPQTGSSHAPAPATVAASLKRK LDDKEDTNGSEKEGGNSGEDQHRDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIA REVGLKKRVVQVWFQNTRARERKGQFRAVGPAQSHKRCPFCRALFKAKSALESHIRSR HWNEGKQAGYSLPPSPLIPAEDGGESPQKYIYFDYPSLPLTKIDLSSENELASTVSTP VSKTAELSPKNLLSPSSFKAECPEDVENLNAPPAEAGYDQNKTDFDETSSVNTAISDA TTGDEGNAEMESTMGSAGDAAKPALSPKEPKTLDALPKAATTPTPEVCDEKFLFSLTS PSIHFNDKDGDHDQSFYITDDPDDNADRSETSSIADPSSPNPFGSSNPFKSKNNDRPG HKRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKK FKINIGKPFMINQSGTEGTKPECALCGVKYSARLSIRDHIFSKQHISKVRETVGSQLD REKDYLAPTTVRQLMAQQELDRIKKASDVLGLAVQQPSVMDSSALHGINLPAAYPGLP GLPPVLLPGMNGPPSLPGFPQNSNTDYLTQLTPQDAEFLEIPE" assembly_gap 16992854..16992898 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17019786..17019814 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17054555..17054570 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17067417..17067441 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17101966..17102125 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17112031..>17113467 /locus_tag="PAL_GLEAN10019369" mRNA <17112031..>17113467 /locus_tag="PAL_GLEAN10019369" /product="Zinc finger homeobox protein 4" CDS 17112031..17113467 /locus_tag="PAL_GLEAN10019369" /codon_start=1 /product="Zinc finger homeobox protein 4" /protein_id="ELK02395.1" /db_xref="UniProtKB/Swiss-Prot:Q9JJN2" /translation="MLGFPPSAASSPALSLGSAPTKSLLQTPPPPPPPPAPSSLPGQQ TEPQNKESEKRPSKPNKVKKIKEEDSEATKPEKHPKKEEKISSALSVLGKVVGETHVD ATQLQALQSAIAGDPASLLGGQFLPYFFPGFASYFTPQLPGAVQGGYLPPVCGVESLF PYGPAMPQTLAGLSPGTLLQQYQQTLQDSLQKQQKQQQQQDPPPKPAQAKTSKGDSDP PPNSSEASESKEDKGTAPESTKEEPQLDPKSADFSDTCVVPFVKYEFICRKCQMMFTD EDATVNHQKSFCYFGQPLIDPQETVLRVPVSRYQCLACDVAISGNQALSQHLQSSLHK EKTIKQAMRNAKEHVRLLPHSVCPPDPSTTSTSQSAASSNNTYPHLSCFSMKSWPDIL FQASARRAASSPSSPPSLSLPSTVTSSLCSTSGVQTSLPTESCSDESDSELSQKLEDL DNSLEVKAKPASGLDGNFNSVRMDMFSV" assembly_gap 17118721..17118736 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17144884..17145159 /estimated_length=276 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17150464..17150529 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17182322..>17183236) /locus_tag="PAL_GLEAN10019370" mRNA complement(<17182322..>17183236) /locus_tag="PAL_GLEAN10019370" /product="Peroxisome assembly factor 1" CDS complement(17182322..17183236) /locus_tag="PAL_GLEAN10019370" /note="GO_component: GO:0005778 - peroxisomal membrane [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0007031 - peroxisome organization [Evidence IEA]" /codon_start=1 /product="Peroxisome assembly factor 1" /protein_id="ELK02396.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR006845" /db_xref="InterPro:IPR018957" /db_xref="UniProtKB/Swiss-Prot:P28328" /translation="MASREESKSAHRVLRISQLDALELNKALEQLVWAQFTQCFHGFK PGLFARFEPEVKALLWLFLWRFTIYSKNATVGQSVLNIRYKNDFSSNPRYQPPSANQK VWYAVCTIGGRWLEERCYDLLRNRHLASFGKAKQCVNFMVGLLKLGGLMNFLIFLQRG KFATLTERLLGIRSVFCKPQRAREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAR LSSWCSPLRGAPNSDSTVAARGKQCSLCGEWPTMPHTIGCEHVFCYYCVKSSFLFDMS FTCPACGTEAHGVQALKSGIEMSEVNAV" assembly_gap 17197509..17197887 /estimated_length=379 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17300789..17301218 /estimated_length=430 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17326053..17326084 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17327227..17327558 /estimated_length=332 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17331113..17331254 /estimated_length=142 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17345395..17345454 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17363560..17363826 /estimated_length=267 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17369973..17369991 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17382103..17382138 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17393371..17393392 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17404740..17404800 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17415258..17415305 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17425441..17425492 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17463202..17463219 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17525174..17525216 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17593147..17593172 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17607212..17607240 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17609925..17609958 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17630543..17630578 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17635925..17635961 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17700332..17700422 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17744607..17744662 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17772018..17772263 /estimated_length=246 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17785959..17785991 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17789080..17789146 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17803480..17803500 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17823423..17823484 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17874382..17874430 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17895107..17895133 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17914751..17914796 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17917579..17917596 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17966260..17966312 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18045258..18045414 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18048012..18048540 /estimated_length=529 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18057209..18057234 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18060467..18060477 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18083139..18083252 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18099323..18099805 /estimated_length=483 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18110625..18110665 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18116473..18116567 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18146413..18146499 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18147438..>18149342 /locus_tag="PAL_GLEAN10019373" mRNA join(<18147438..18147588,18149263..>18149342) /locus_tag="PAL_GLEAN10019373" /product="cAMP-dependent protein kinase inhibitor alpha" CDS join(18147438..18147588,18149263..18149342) /locus_tag="PAL_GLEAN10019373" /note="GO_function: GO:0004862 - cAMP-dependent protein kinase inhibitor activity [Evidence IEA]; GO_process: GO:0006469 - negative regulation of protein kinase activity [Evidence IEA]" /codon_start=1 /product="cAMP-dependent protein kinase inhibitor alpha" /protein_id="ELK02397.1" /db_xref="InterPro:IPR004171" /db_xref="UniProtKB/Swiss-Prot:Q3SX13" /translation="MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAG LDINKTEGEEDAQRNSTEQSGEAQGEAAKSDS" assembly_gap 18184131..18184567 /estimated_length=437 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18192051..>18218980 /locus_tag="PAL_GLEAN10019374" mRNA join(<18192051..18192140,18194149..18194265, 18198371..18198512,18200613..18200761,18202774..18202870, 18203527..18203626,18216721..18216828,18218815..>18218980) /locus_tag="PAL_GLEAN10019374" /product="UPF0418 protein FAM164A" CDS join(<18192051..18192140,18194149..18194265, 18198371..18198512,18200613..18200761,18202774..18202870, 18203527..18203626,18216721..18216828,18218815..18218980) /locus_tag="PAL_GLEAN10019374" /codon_start=1 /product="UPF0418 protein FAM164A" /protein_id="ELK02398.1" /db_xref="UniProtKB/Swiss-Prot:Q96GY0" /translation="FFSVLENGSVQVGELLPCKICGRTFFPVALKKHGPICQKTATKK RKTFDSSRQRAEGTDIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRAAKGLDQALKE GGRLPPPPPPSYDPDYIQCPYCQRRFNENAADRHINFCKEQAARISNKGKFSTDTKGK VTSRPQYKPPALKKSNSPGTASGSSRLPQPSAISKTIVGAPSGKASSVSGPLGSKLQT SSPSHKGVAAPHAGANIRPRNSTPPSLARNPVSAVLTSKRKTHAESYMAKPDGDFVSA LNGGNVKGLEGSSSGHLPKFCHECGTKFPVDWAKFCCECGVRRMVL" assembly_gap 18196133..18196303 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18215762..18215780 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18225771..>18231366) /locus_tag="PAL_GLEAN10019376" mRNA complement(join(<18225771..18225890,18227907..18227960, 18231286..>18231366)) /locus_tag="PAL_GLEAN10019376" /product="Interleukin-7" CDS complement(join(18225771..18225890,18227907..18227960, 18231286..18231366)) /locus_tag="PAL_GLEAN10019376" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005126 - cytokine receptor binding [Evidence IEA]; GO_function: GO:0005139 - interleukin-7 receptor binding [Evidence IEA]; GO_function: GO:0008083 - growth factor activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="Interleukin-7" /protein_id="ELK02399.1" /db_xref="InterPro:IPR000226" /db_xref="InterPro:IPR001181" /db_xref="UniProtKB/Swiss-Prot:Q28540" /translation="MNIQEEFKHHLTVLSQGTLKLLNCTRKEKEKKQPSLGEAQPTKN LEEKKSLKEQKKLDEMCFLKILLEKIKTCWNKILSGTKEH" assembly_gap 18235665..18236072 /estimated_length=408 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18237238..18237255 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18261482..18262175 /estimated_length=694 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18270696..18270709 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18274415..18274440 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18286652..18286773 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18287499..18287556 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18292173..>18292400 /locus_tag="PAL_GLEAN10019379" mRNA <18292173..>18292400 /locus_tag="PAL_GLEAN10019379" /product="hypothetical protein" CDS 18292173..18292400 /locus_tag="PAL_GLEAN10019379" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02400.1" /translation="MAWCGVSTISTRVNRMSVSDGRYGKSQSQARPSSLHGVYARGIS WIRVICFYAHEFLFHALNQPPLCVLSYSVSH" assembly_gap 18296168..18296193 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18318802..18323013 /estimated_length=4212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18339299..18339607 /estimated_length=309 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18381096..18381166 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18395099..18395815 /estimated_length=717 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18409684..18409728 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18450001..18450024 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18479582..18479655 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18528241..18528284 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18545466..18545897 /estimated_length=432 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18561038..18561078 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18562801..18562831 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18565210..>18578468 /locus_tag="PAL_GLEAN10019381" mRNA join(<18565210..18565291,18568992..18569164, 18578088..>18578468) /locus_tag="PAL_GLEAN10019381" /product="Stathmin-2" CDS join(18565210..18565291,18568992..18569164, 18578088..18578468) /locus_tag="PAL_GLEAN10019381" /note="GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]" /codon_start=1 /product="Stathmin-2" /protein_id="ELK02401.1" /db_xref="InterPro:IPR000956" /db_xref="UniProtKB/Swiss-Prot:P55821" /translation="MKELSMLSLICSCFYPEPRNGGIYTYDDMEVKQINKRASGQAFE LILKPPSPISEAPRTLASPKKKDLSLEEIQKKLEAAEERRKCQEAQVLRQLAEKREHE REVLQKALEENNNFSKMAEEKLILKMEQIKENREANLAAIIERLQEKVSAAEPGQRRS GCPRGGGEGVRGGQGPPAAKWGCDRGQGGLSEFPVAKGLGGGSLLLCFSKA" assembly_gap 18577686..18577956 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18591199..18591235 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18592006..18592491 /estimated_length=486 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18596867..18596957 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18630315..>18632447) /locus_tag="PAL_GLEAN10019382" mRNA complement(join(<18630315..18630898,18631820..18631901, 18632181..18632264,18632397..>18632447)) /locus_tag="PAL_GLEAN10019382" /product="Hairy/enhancer-of-split related with YRPW motif protein 1" CDS complement(join(18630315..18630898,18631820..18631901, 18632181..18632264,18632397..18632447)) /locus_tag="PAL_GLEAN10019382" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Hairy/enhancer-of-split related with YRPW motif protein 1" /protein_id="ELK02402.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR003650" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR018352" /db_xref="UniProtKB/Swiss-Prot:Q9TSZ2" /translation="MSPTTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEK QGSAKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSI IEGLDASDPLRVRLVSHLNNYASQREAASGAHAGLGHIPWGGAFAHHAHVAHPLLLPQ NGHGNTGPAASPTDPHHQGRLAGAHAEAPALRAPPSGGLGPVLPVVTSASKLSPPLLS SVASLSAFPFSFGSFHLLSPNALSPSAPTQAANLGKPYRPWGTEIGAF" assembly_gap 18632643..18633375 /estimated_length=733 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18641946..18642235 /estimated_length=290 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18648809..18649080 /estimated_length=272 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18654696..18654766 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18659123..>18718430 /locus_tag="PAL_GLEAN10019383" mRNA join(<18659123..18659438,18718267..>18718430) /locus_tag="PAL_GLEAN10019383" /product="hypothetical protein" CDS join(18659123..18659438,18718267..18718430) /locus_tag="PAL_GLEAN10019383" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02403.1" /translation="MLRTLRSISPRGAWEGHGSPFGETAGAPLGDATEAPPGDATKAP LGRPPEPLQGMPLLQLLLGSGRPGLRDRDRDRASPFGAPLGRRPGVARAPVAGVAAAG RRSYSQEVKYKACELQSSESSGGDQRLQCDVECAMLEAQGAAKKSLGKTGQGTVQKS" assembly_gap 18691421..18692076 /estimated_length=656 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18708055..18708625 /estimated_length=571 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18734007..18734051 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18735431..18735534 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18761647..>18775200) /locus_tag="PAL_GLEAN10019386" mRNA complement(join(<18761647..18761686,18763099..18763280, 18774985..>18775200)) /locus_tag="PAL_GLEAN10019386" /product="28S ribosomal protein S28, mitochondrial" CDS complement(join(18761647..18761686,18763099..18763280, 18774985..18775200)) /locus_tag="PAL_GLEAN10019386" /codon_start=1 /product="28S ribosomal protein S28, mitochondrial" /protein_id="ELK02404.1" /db_xref="InterPro:IPR019375" /db_xref="UniProtKB/Swiss-Prot:P82928" /translation="MAALCRTRAAAAESHFLRPFLFARPRRGAGTESGSGSESPESAE PRTRPGGFASALERHSELQRKAGLGRPGGSPKSVESFASMLRHSPLTQMGPAKDKLVI GRIFHIVENDLYIDFGGKFHCVCRRPEVDGDYELKSEITLKQE" assembly_gap 18774795..18774911 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18780597..18780643 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18780910..>18812770) /locus_tag="PAL_GLEAN10019387" mRNA complement(join(<18780910..18781029,18783206..18783266, 18784723..18784764,18792396..18792497,18793871..18794019, 18801087..18801202,18812629..>18812770)) /locus_tag="PAL_GLEAN10019387" /product="Tumor protein D52" CDS complement(join(18780910..18781029,18783206..18783266, 18784723..18784764,18792396..18792497,18793871..18794019, 18801087..18801202,18812629..18812770)) /locus_tag="PAL_GLEAN10019387" /codon_start=1 /product="Tumor protein D52" /protein_id="ELK02405.1" /db_xref="InterPro:IPR007327" /db_xref="UniProtKB/Swiss-Prot:P55327" /translation="MDSREMELYEDYQSPFDFDAGVNKKYLYLSPSGNPSPPGSPTTL QKFDPLGTDPVPEAGEDVAAAISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKE KHLAEIKRKLGINSLQELKQNIARGWQDVTATPAYKKTSETLSQAGQKASAAFASVGS VITKKLEDVNIRSIQHSISMPAMRNSPTFKSFEEKVENLKASRESKVGGTKPAGGDFG EVLNSTANASATSTEPLPDQTQERP" assembly_gap 18790452..18790546 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18794859..18794914 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18797081..18797230 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18812349..18812534 /estimated_length=186 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18833039..18833089 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18846031..18847211 /estimated_length=1181 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18848226..18848345 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18868406..18868513 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18881924..18882121 /estimated_length=198 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18899842..18899971 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18904318..18904366 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18913643..18914418 /estimated_length=776 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18934637..18934702 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18962242..18962359 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19012976..19014389 /estimated_length=1414 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19014498..>19036654 /locus_tag="PAL_GLEAN10019388" mRNA join(<19014498..19014743,19020431..19021319, 19031733..19031831,19035537..19035644,19035910..19036082, 19036349..>19036654) /locus_tag="PAL_GLEAN10019388" /product="Zinc finger and BTB domain-containing protein 10" CDS join(19014498..19014743,19020431..19021319, 19031733..19031831,19035537..19035644,19035910..19036082, 19036349..19036654) /locus_tag="PAL_GLEAN10019388" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger and BTB domain-containing protein 10" /protein_id="ELK02406.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q96DT7" /translation="MQKLQCSFQTAWLRDFPWLRYSKETGLMSCGWCQKTPEDGGSGD LPQVGHDELSRGTRNYKKTLLLRHHVSTEHKLHEANAQESEIPSEEGYCDFNSRPNEN SYCYQLLRQLNEQRKKGILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPN QNNTTHLDIAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCRNFIK DALNISIKSEAPESVVVDYNNRKPVNRDGLSSSRDQKIASFWATRNLTNLASNVKIEN DGCNVDEGQMENYQMNDSSWVQDGSPELVENESQSQTKVFIWNNMSSQGIQETGKTRR KNQTTKRFIYNIPPNNETNLEDCSVMQPPVAYPEEDLSFIKEEPDLDGALLSGQDCDR NMNASLLAEASSGQDGGDAGTSHDFKYGLMPGPSSDFKYGLLPSTSNEFKYGLLPGES SLNTNKLKCPHCTYVAKYRRTLKRHLLIHTGVRSFSCDICGKLFTRREHVKRHSLVHK KDKKYKCMVCKKIFMLAASVGIRHGSRRYGVCVDCADKSQPGGQEGVDQGQDTDFPRD EEYEENEAGEADEELADDGEDQNDPSRWDESGDVCMSLDD" assembly_gap 19072098..19072165 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19082422..19082969 /estimated_length=548 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19123501..>19147453) /locus_tag="PAL_GLEAN10019390" mRNA complement(join(<19123501..19123834,19124197..19124294, 19130477..19130581,19132651..19132918,19135844..19135988, 19142729..19142923,19147372..>19147453)) /locus_tag="PAL_GLEAN10019390" /product="Zinc finger protein 704" CDS complement(join(19123501..19123834,19124197..19124294, 19130477..19130581,19132651..19132918,19135844..19135988, 19142729..19142923,19147372..19147453)) /locus_tag="PAL_GLEAN10019390" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 704" /protein_id="ELK02407.1" /db_xref="InterPro:IPR007087" /db_xref="UniProtKB/Swiss-Prot:Q6ZNC4" /translation="MDKVTAAMVLTSLSTSPLVRSPPVRPSEGLSGSWKEGGAASGSC SSGGYWSWSAPSDQSSPSTPSPPLSADSAKPFRSPAPDDGIDEAEASSRRFMSVLMSL SPPFQNSMKVMFKCLWKSCGKVLSTAAGIQKHIRTVHLGRVGDSDYSDGEEDFYYTEI KLNTDSVADGLSSLAPASPSQPLASPPTFPIPDSGRAETPGAKTEPKLMTPLSRSAPT TLYLVHTDHAYQATPPVTIPGSAKFTPNGGSFSISWQSPPVTFTGIPVSPTHHHLVGP GEQRQHPHTVLSSPPRGTVSLRKPRGEGKKCRKVYGMENRDLWCTACRWKKACQRFTX XXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPAQEKRVQEPRWNHSQGKTKRSPPPLAL QRPDRPRAAVTHRPRG" assembly_gap 19123642..19123728 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19134289..19135588 /estimated_length=1300 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19142644..19142728 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19159945..19159982 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19172237..19172442 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19193921..19193969 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19209051..19209086 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19216763..19217708 /estimated_length=946 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19220962..19220990 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19223274..19223533 /estimated_length=260 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19237856..19239052 /estimated_length=1197 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19243289..19243370 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19245209..19245242 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19274369..>19286690) /locus_tag="PAL_GLEAN10019392" mRNA complement(join(<19274369..19274737,19278514..19278573, 19280369..19280599,19280909..19280955,19282867..19282963, 19284875..19284926,19286566..>19286690)) /locus_tag="PAL_GLEAN10019392" /product="Phosphoprotein associated with glycosphingolipid-enriched microdomains 1" CDS complement(join(19274369..19274737,19278514..19278573, 19280369..19280599,19280909..19280955,19282867..19282963, 19284875..19284926,19286566..19286690)) /locus_tag="PAL_GLEAN10019392" /codon_start=1 /product="Phosphoprotein associated with glycosphingolipid-enriched microdomains 1" /protein_id="ELK02408.1" /db_xref="UniProtKB/Swiss-Prot:Q9JM80" /translation="MGPSGGVLAGGHTQIVLWGSLAAVATCLLVALLIFLCSSCDREK KPRQHSGDHENLMNVPSDKEVFSRSVTSLATDAPASSEQNGLLTNGDILSEDSAATCG QHYEEAPDGADVAEYASVDRNRKYWQSVDAENVPQNPGDPEEEAPPPVPVKRLDENEN LQEEEERKATEGRAPEGPASDTSKRFSSLSYKSRHEDPTLTEEEISAMYSSVNKPGQC GNRPGQSLKASESSRMCDPGAAQRSPSSCSDLYATVKDFEKTARSASLLPAAGRPRED SEPDYEAIQTMDREEEKAAPEASGRPGSGPRESDYESIVDVQQGREVTRL" assembly_gap 19274772..19274841 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19278142..19278192 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19280622..19280849 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19281094..19281434 /estimated_length=341 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19314499..19315013 /estimated_length=515 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19320285..19320969 /estimated_length=685 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19344703..19344784 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19349648..19349661 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19351743..19351880 /estimated_length=138 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19356103..19356202 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19368587..19368647 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19369445..19369921 /estimated_length=477 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19372845..19373004 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19373972..19374231 /estimated_length=260 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19376082..19376192 /estimated_length=111 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19386205..19386222 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19392211..19394068 /estimated_length=1858 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19407183..>19412709 /locus_tag="PAL_GLEAN10019395" mRNA join(<19407183..19407322,19412526..>19412709) /locus_tag="PAL_GLEAN10019395" /product="hypothetical protein" CDS join(19407183..19407322,19412526..19412709) /locus_tag="PAL_GLEAN10019395" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02409.1" /translation="MSPVLRLRHPGAAAAGDAHVTASRAIGFQAATADSGLQSPAAPC TTSGRGSGVGVVSHQRDTSKASRLPRERVRSQGVQEANGPGGNKVPLQKCLMAEVGSG VATRT" assembly_gap 19422456..19422516 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19445487..19445908 /estimated_length=422 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19460140..>19461373 /locus_tag="PAL_GLEAN10019396" mRNA join(<19460140..19460304,19460669..19460770, 19461320..>19461373) /locus_tag="PAL_GLEAN10019396" /product="Fatty acid-binding protein, epidermal" CDS join(19460140..19460304,19460669..19460770, 19461320..19461373) /locus_tag="PAL_GLEAN10019396" /note="GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0008289 - lipid binding [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Fatty acid-binding protein, epidermal" /protein_id="ELK02410.1" /db_xref="InterPro:IPR000463" /db_xref="InterPro:IPR000566" /db_xref="InterPro:IPR011038" /db_xref="UniProtKB/Swiss-Prot:P55052" /translation="MALRKMGAIAKPDCIITSDGQNLTIKSESTLKTTQFSCKLGEKF EETTADGRKTQTVCSFVDGALVQRQEWDGKESTITRKLEGGKMVVECVMNDVTCTRIY EKVE" assembly_gap 19465658..19465670 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19467002..19467045 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19482865..19482911 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19484276..19484298 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19497546..19498156 /estimated_length=611 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(19515490..19525347) /locus_tag="PAL_GLEAN10019397" /note="Myelin P2 protein" /pseudo gene complement(<19531124..>19535765) /locus_tag="PAL_GLEAN10019398" mRNA complement(join(<19531124..19531372,19531853..19532025, 19534506..19534696,19535608..>19535765)) /locus_tag="PAL_GLEAN10019398" /product="Fatty acid-binding protein, adipocyte" CDS complement(join(19531124..19531372,19531853..19532025, 19534506..19534696,19535608..19535765)) /locus_tag="PAL_GLEAN10019398" /note="GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0008289 - lipid binding [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Fatty acid-binding protein, adipocyte" /protein_id="ELK02411.1" /db_xref="InterPro:IPR000463" /db_xref="InterPro:IPR000566" /db_xref="InterPro:IPR011038" /db_xref="UniProtKB/Swiss-Prot:Q99P60" /translation="MDAVLKADGYLMREHSVFSSSEILTWICKSVVHSAVIDPSVKSW FLFSFPKSGSRGLGIFKRRLSGLETGSTPSRRLQLLPTLKNNPRKLTKMCDAFVGTWK LVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVDGDVITIKSESTFKNTEISFKLG QEFDEVTADDRKVKNFGRPQSHPSDTADVFPVSFSSAMYKSWPLFVAPQSTVNLEGGA LVQVQKWDGKSTTIKRKRVDDKLVVVSVSRLLGSAAIV" gene complement(<19551702..>19557019) /locus_tag="PAL_GLEAN10019399" mRNA complement(join(<19551702..19551776,19553167..19553268, 19555154..19555326,19556947..>19557019)) /locus_tag="PAL_GLEAN10019399" /product="Putative fatty acid-binding protein ENSP00000353650" CDS complement(join(19551702..19551776,19553167..19553268, 19555154..19555326,19556947..19557019)) /locus_tag="PAL_GLEAN10019399" /note="GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0008289 - lipid binding [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Putative fatty acid-binding protein ENSP00000353650" /protein_id="ELK02412.1" /db_xref="InterPro:IPR000463" /db_xref="InterPro:IPR000566" /db_xref="InterPro:IPR011038" /db_xref="UniProtKB/Swiss-Prot:A6NFH5" /translation="MVDQFQGTWKSISCENFEDYMKELGIGRASRKLGCLAKPTVTIK TEGDVTTIKTKSIFKNNEISFKLGEEFEETTPGGHKTKSVITLDNDSLIQIQDWDGKK ISVKRTVADGKMVVESAVNSVICTRTYERVEANSASNP" assembly_gap 19564168..19564255 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19568745..19569316 /estimated_length=572 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19579526..>19592011) /locus_tag="PAL_GLEAN10019400" mRNA complement(join(<19579526..19579641,19580444..19580595, 19584211..19584319,19585680..19585788,19588667..19588712, 19590203..19590307,19591444..19591577, 19591949..>19592011)) /locus_tag="PAL_GLEAN10019400" /product="Inositol monophosphatase" CDS complement(join(19579526..19579641,19580444..19580595, 19584211..19584319,19585680..19585788,19588667..19588712, 19590203..19590307,19591444..19591577,19591949..19592011)) /locus_tag="PAL_GLEAN10019400" /note="GO_function: GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA]" /codon_start=1 /product="Inositol monophosphatase" /protein_id="ELK02413.1" /db_xref="InterPro:IPR000760" /db_xref="InterPro:IPR020552" /db_xref="UniProtKB/Swiss-Prot:P20456" /translation="MADPWQECMDYAVALARQAGEVVREALKNEMNVMIKSSPADLVT ATDQKVEKMLISFIKEKYPSHSFIGEESVAAGEKCVLTDNPTWIIDPIDGTTNFVHRF PFVAVSIGFVVNKKMEFGVVYSCVEDKMYTARKGRGAFCNGQKLQVSQQEDITKSLLV TELGSLRTPETVRIILSNMEKLLCIPIHGIRGVGTAAVNMCLVASGAADAYYEMGIHC WDMAGAGIIVTEAGGVLMDATGGPFDLMSRRIIAAGSKTLAERIAKEIQIVPFQRDDD N" assembly_gap 19584951..19585000 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19598744..>19600071) /locus_tag="PAL_GLEAN10019401" mRNA complement(join(<19598744..19599426,19599987..>19600071)) /locus_tag="PAL_GLEAN10019401" /product="Sodium/bile acid cotransporter 5" CDS complement(join(19598744..19599426,19599987..19600071)) /locus_tag="PAL_GLEAN10019401" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0008508 - bile acid:sodium symporter activity [Evidence IEA]; GO_process: GO:0006814 - sodium ion transport [Evidence IEA]" /codon_start=1 /product="Sodium/bile acid cotransporter 5" /protein_id="ELK02414.1" /db_xref="InterPro:IPR002657" /db_xref="UniProtKB/Swiss-Prot:Q5PT55" /translation="MKLQADRDRVWLDYSGTQHLAQYPANMAKNTETLFFTKTEESVS VRSSYRDKRPNSSYLFVQVEDPKVLQVVNVTKTLSDVTNFVINLVTDEEGETNLTIQL WDSEGRQERLIDEIKSIRVQVLKRRTDSLLQASMHVNRNILVLVLPTVLLNKCAFGCK IELQVFQTVWKRPLPVILGAVTQFFLMPFCGFLLTQILALPEAQAFGFIMTCTCPGGG GGYVFALLLEGDITLAILMTCISTLXXXXACQFLPIR" assembly_gap 19598773..19598782 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19603183..>19630751) /locus_tag="PAL_GLEAN10019402" mRNA complement(join(<19603183..19603353,19603434..19603589, 19605891..19606012,19606731..19606834,19606921..19607048, 19608075..19608114,19630366..19630430, 19630500..>19630751)) /locus_tag="PAL_GLEAN10019402" /product="AN1-type zinc finger protein 1" CDS complement(join(19603183..19603353,19603434..19603589, 19605891..19606012,19606731..19606834,19606921..19607048, 19608075..19608114,19630366..19630430,19630500..19630751)) /locus_tag="PAL_GLEAN10019402" /note="GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="AN1-type zinc finger protein 1" /protein_id="ELK02415.1" /db_xref="InterPro:IPR000058" /db_xref="UniProtKB/Swiss-Prot:Q8TCF1" /translation="MVRKVTSSHECPRVLEGHTQGSGGRLVAEALASEKRHLNTLPSA PEQNNLTSFIQKSRNSDRGALEGTHKRDPKMRDSMRHLAKIRLWFPGEARYRNGFLRE GSLHLEHRSRESHSCPEVTVINERLKSDAHPSYPCSFKGCAERQLVPVVCPYCEKHFC LRHRHQSDHECEKLEVPEPRMAATQKLVKDIIGKYQNSKAGQTTRKGRKGAKNSETAA KVALMKLKMHAYGDRSVPQTERIYFQVFLPKGSKEKSKPMFFCHRWSVGKAIDFAAAL ASLKNDNNKFTAKKLRLCHVTSGQALPLDHTLESWMAKEACPLHSGGNVILEYLSDDE QFLKDIDSYFE" assembly_gap 19611668..19612132 /estimated_length=465 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19637286..19637353 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19641217..19642251 /estimated_length=1035 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19645730..>19662899) /locus_tag="PAL_GLEAN10019404" mRNA complement(join(<19645730..19645835,19646522..19646641, 19647172..19647308,19651242..19651311,19655190..19655338, 19659212..19659298,19662525..>19662899)) /locus_tag="PAL_GLEAN10019404" /product="Sorting nexin-16" CDS complement(join(19645730..19645835,19646522..19646641, 19647172..19647308,19651242..19651311,19655190..19655338, 19659212..19659298,19662525..19662899)) /locus_tag="PAL_GLEAN10019404" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0035091 - phosphoinositide binding [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]" /codon_start=1 /product="Sorting nexin-16" /protein_id="ELK02416.1" /db_xref="InterPro:IPR001683" /db_xref="UniProtKB/Swiss-Prot:P57768" /translation="MATPYVPVPLPTGDSASSFLASRNQRSSSFGSISTSSNSSKGQF EDSNMGTLKQTRVPDQADSTSSVSSSPLVRTKFTDADSSVEYSTRPRESEERNPEMAN LDDRPSTPTILGYEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFARLNEKLKEMFP GFRLSLPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIAHCLAVREFLCLDDPPG PFDSLEESRAFCETLEETNYRLQKELLEKQKELESLRKVLSEKQLHIDTLESRLRALC SEAEESLCLSGTEGERFRKAKSSALDLSREVLDGESSAHDKSRLSLSEPETSASEIEV AEVAYNAEEDSTS" assembly_gap 19664452..19664787 /estimated_length=336 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19670894..19670942 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19812490..19812707 /estimated_length=218 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19827152..19827166 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19887570..19887769 /estimated_length=200 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19901018..19901143 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19908015..19908056 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19909738..19909773 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19915995..19916065 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19932988..19933937 /estimated_length=950 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19943917..19944371 /estimated_length=455 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19984869..19984955 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20030968..20031082 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20032911..20032989 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20122217..20122250 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20132455..20132511 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20153631..20153663 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20162501..20162518 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20185025..20185173 /estimated_length=149 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20185554..20185564 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20195520..20195542 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20242590..20242608 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20254489..20254499 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20260418..20260434 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20273771..20273797 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20278815..20278939 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20279650..20279679 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20288052..20288159 /estimated_length=108 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20299090..20299118 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20303089..20305252 /estimated_length=2164 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20307574..20307689 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20340357..20340384 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20343089..20343102 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20397491..20397548 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20405202..20405317 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20412225..20412437 /estimated_length=213 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20415318..20416133 /estimated_length=816 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20464148..20464214 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20473775..20474365 /estimated_length=591 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20498683..20498702 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20515375..20515408 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20573593..20573611 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20575600..20576328 /estimated_length=729 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20580895..20583077 /estimated_length=2183 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20587423..20587638 /estimated_length=216 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20619134..20619173 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20620751..20621351 /estimated_length=601 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20638024..20638047 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20640270..20640496 /estimated_length=227 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20643143..20643191 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20648057..20648112 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20648520..20649314 /estimated_length=795 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20650551..20650706 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20666874..20666896 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20683508..20683581 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20699124..20699626 /estimated_length=503 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20706856..20706902 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20710711..20710750 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20716418..20717790 /estimated_length=1373 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20727678..20727828 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20735025..20735090 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20757296..20757320 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20871583..20871619 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20873667..20873929 /estimated_length=263 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20905563..20905661 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20912356..20912388 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20937897..20938095 /estimated_length=199 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20949730..20949778 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20973058..20974154 /estimated_length=1097 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 20994359..20995430 /estimated_length=1072 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21018586..21018829 /estimated_length=244 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21025786..21025802 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21045484..21045622 /estimated_length=139 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21068333..21069386 /estimated_length=1054 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21083927..21084601 /estimated_length=675 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21086332..>21105218 /locus_tag="PAL_GLEAN10019428" mRNA join(<21086332..21086593,21086910..21086975, 21087732..21087899,21089654..21089829,21089926..21090135, 21091509..21091705,21091957..21092104,21092993..21093141, 21093621..21093825,21094326..21094465,21095729..21095937, 21096697..21096875,21097347..21097521,21098254..21098417, 21101084..21101292,21101376..21101513,21102387..21102522, 21105072..>21105218) /locus_tag="PAL_GLEAN10019428" /product="Leucine-rich repeat and coiled-coil domain-containing protein 1" CDS join(21086332..21086593,21086910..21086975, 21087732..21087899,21089654..21089829,21089926..21090135, 21091509..21091705,21091957..21092104,21092993..21093141, 21093621..21093825,21094326..21094465,21095729..21095937, 21096697..21096875,21097347..21097521,21098254..21098417, 21101084..21101292,21101376..21101513,21102387..21102522, 21105072..21105218) /locus_tag="PAL_GLEAN10019428" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Leucine-rich repeat and coiled-coil domain-containing protein 1" /protein_id="ELK02417.1" /db_xref="InterPro:IPR001611" /db_xref="UniProtKB/Swiss-Prot:Q9C099" /translation="MISKSIFYLFVIIYILFYSISELSLDSTLHAINLHCNNISKIEA IGHVWNLQHLDLSSNQISQIEGLSTLTKLCTLNLSCNLITRVEGLDALINLTRLNLSY NHINDLSGFIPLHGIRHKLRYVDLHSNCIDSIHHLLQCVVGLHFLTNLILEKDGEDNP VCRVPGYRAVMLQTLPQLRILDCKNIFGEPVNLSEVNSSRLQCFEGLLDNLVSSDSPL NISEDEVIDNIPVVTPPISDMVPLEQFANTPADNDLTSFTSVCPSAQQEKVNHETDFE NEMKLQKLDDQFIQLLNETSSSLIDTVPEKDLRPKRDTDVTSESDYGHRKECNRKIPR RSKIPYYSKTIQTIKHHNKNSNPFISGNRKMKQPIFKELYVRSSLANYDVSEEPEEQK TELIKVDNSSSEDNTYRVLVEQLDQEREKRWKAEQAEKKLMDYVDELHKQANEKNDIQ CLALLTTDRLKDIIFKERSSKVQLEVMVHKLQSEIKKLTIELIKARDQQEDHIRHLRT LEKALEKVERQKGQQQAAQMRLIQEVELKAAAADREISLLRTSLHQEKEQVQQLHDLL SLKEEEHRKELETREFFSNAEFQEAVAKEVAKEEARHEEEIKEYQGKVEALTQQYLDL ENEFRFALTVEAKRFRDVRHGFENVATELAKSKYALVWAQRKENESSSLIKDLTCIVK EQKTKLAEVSKLKQETTANLQNQINTLEILIEDDKQKSIQIELLKHEKVQLISELAAK ESLIYGLRTERKVWGHELAQQGSCLAQNRGKLEAQIESLCRENECLRKTNERDSDTLR IKCKIIEDQTETITKLKVCLQEREEQIKTLQEKITEIQKCTQEQLEEKSSQLDDIIEK LERHNERKEKLKQQLRAKELELEEIREAYSALNQKWRDKGELLSNLEMQVKEAKEKFD NKERTLKAERDKSIELQKDTLEKLHSMDDAFKKQVDAIVEAHQAEIIKMASEKQKYID SANLKVHQVEEEMRELLQETCKNKKAMEAKIKRLAFALNEIQRDCDSSETGLN" assembly_gap 21107553..21108474 /estimated_length=922 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21111421..>21118835 /locus_tag="PAL_GLEAN10019430" mRNA join(<21111421..21111728,21112565..21112726, 21113883..21113929,21115102..21115166,21116117..21116215, 21116442..21116535,21117726..21117773,21118726..>21118835) /locus_tag="PAL_GLEAN10019430" /product="Transcription factor E2F5" CDS join(21111421..21111728,21112565..21112726, 21113883..21113929,21115102..21115166,21116117..21116215, 21116442..21116535,21117726..21117773,21118726..21118835) /locus_tag="PAL_GLEAN10019430" /note="GO_component: GO:0005667 - transcription factor complex [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Transcription factor E2F5" /protein_id="ELK02418.1" /db_xref="InterPro:IPR003316" /db_xref="UniProtKB/Swiss-Prot:Q15329" /translation="MGCVSRPLHFSPHRGVTAVRQPLSRPDAVSGSGRXXXXXXXXXX XXXXXXXCVLVLCPPPAPFLKQAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQW KGVGAGCNTTEVVDRLRCLKAEIKDLELKERELDQHKLWLQQSIRNVMSDAINNSTFS YVTHEDICDCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLI NKEASSSKPKPHAATPSPPGPPACERSQSLQQTVATDLPSAGSVSADIIDELMSSDVF PLLRLSPTPADDYSFNLDENEGVCDLFDVQILNY" assembly_gap 21111523..21111572 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21116255..21116416 /estimated_length=162 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21123599..21123890 /estimated_length=292 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21129634..>21138703 /locus_tag="PAL_GLEAN10019432" mRNA join(<21129634..21129661,21130049..21130198, 21132240..21132437,21134763..21134955,21137886..21138006, 21138539..>21138703) /locus_tag="PAL_GLEAN10019432" /product="Carbonic anhydrase 13" CDS join(21129634..21129661,21130049..21130198, 21132240..21132437,21134763..21134955,21137886..21138006, 21138539..21138703) /locus_tag="PAL_GLEAN10019432" /codon_start=1 /product="Carbonic anhydrase 13" /protein_id="ELK02419.1" /db_xref="InterPro:IPR001148" /db_xref="UniProtKB/Swiss-Prot:Q9D6N1" /translation="MDGGAKASLAGAGPGKGLKIRPRHLPDLDPAPKARGAFPTASSD TCHRGVPCATAAVTRGPIHWKEFFPIADGDRQSPIEIKTEEARYDSSLQPLSIQYDPR SARIISNNGHSFSVDFDDTEDKSVLRGGPLAGTYRLRQFHLHWGRSDDHGSEHRVDGV CFAAEVSPWPSSPLCLQARDTDAPCLGPRRVIRTRSDTVTISFEISCFQIGEFNPQLQ KITDILDSIKEKGKQTRFTNFDPSSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPI KISSQQVR" assembly_gap 21129723..21129887 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21135195..21135433 /estimated_length=239 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21136380..21137423 /estimated_length=1044 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21142868..21142905 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21169775..21169825 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21185348..>21194619 /locus_tag="PAL_GLEAN10019434" mRNA join(<21185348..21186443,21188739..21189016, 21190300..21190392,21191461..21191523,21193062..21193331, 21194527..>21194619) /locus_tag="PAL_GLEAN10019434" /product="Carbonic anhydrase 3" CDS join(21185348..21186443,21188739..21189016, 21190300..21190392,21191461..21191523,21193062..21193331, 21194527..21194619) /locus_tag="PAL_GLEAN10019434" /codon_start=1 /product="Carbonic anhydrase 3" /protein_id="ELK02420.1" /db_xref="InterPro:IPR001148" /db_xref="UniProtKB/Swiss-Prot:P16015" /translation="MHGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAGSGARDVYEAQQPPSRRSAGAELSFT TRGATGAERPGHWPRTTVSGQEGRSHGPWLRGAGQRSAPGPVSRLRRGLAGGEGAWAA LQTTGVSASAPGGRWENGDKSISEEAFEAAFWSQGRGHLCAGPKRQALHCGASRSFSQ GPQSEGGFGRRPQINQSPHLDLLGPDHWHQHYPIAKGNNQSPIELHTKDIKHDPSLLP FSVSYDPGSCKTILNNGKTCRVVFDDTFDRSMLRGGPLSGPYRLRQFHLHWGSADDHG SEHTVDGVKFAAEVGGTAVAHSGSRTVKTELSPSRMRRFCSRPAAWEELESLGPGEMK PQSVPGWRLHLVHWNPKYNTFGEALKQPDGIAVVGIFLKIGREKGEFQLLLDALDKVK TKALCLQVPFPPLHLNALSPVRRCGGRAALTHLLAPCALQGKDAPFTRFDPSCLFPAC RDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPPQIRGSIR LSEVEF" assembly_gap 21185365..21185734 /estimated_length=370 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21193360..21193403 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21202169..21203676 /estimated_length=1508 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21204329..>21215957 /locus_tag="PAL_GLEAN10019435" mRNA join(<21204329..21204701,21211963..21212081, 21213109..21213201,21213651..21213713,21214726..21214881, 21215838..>21215957) /locus_tag="PAL_GLEAN10019435" /product="Carbonic anhydrase 2" CDS join(21204329..21204701,21211963..21212081, 21213109..21213201,21213651..21213713,21214726..21214881, 21215838..21215957) /locus_tag="PAL_GLEAN10019435" /codon_start=1 /product="Carbonic anhydrase 2" /protein_id="ELK02421.1" /db_xref="InterPro:IPR001148" /db_xref="UniProtKB/Swiss-Prot:P00918" /translation="MPLSHRSANGETEARRVFPGGDAAAWCRPNWAERSQCPFAGREC TLPAAGLTRPFSTPGPEHWHQSFPIAKGKRQSPVDIDTKAAVHDSSLKPLRVSYEQAT SRRILNNGHSFNVEFDDSQDKAVLTGGPLQGTYRLIQIHLHWGSCDGQGSEHTVNQKK YSAELHLVHWNTKYKDFREAVQHPDGLAVLGVFLKIGDANPGLQKVTDALDSIKTKGK SADFANFDPRGLLPGSLDFWTYPGSLTTPPLLECVTWLVLREPIGVSSEQMQKFRKLN FNAEGEVEELMVDNWRPPQPLHARQVKASFQ" assembly_gap 21215226..21215400 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21255627..>21255992 /locus_tag="PAL_GLEAN10019437" mRNA <21255627..>21255992 /locus_tag="PAL_GLEAN10019437" /product="hypothetical protein" CDS 21255627..21255992 /locus_tag="PAL_GLEAN10019437" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02422.1" /translation="MPHDAFAESSRQESHRFVFSTFVQGALMGHVPRVCPRAAFVALS LRVPGVRGAGLWASLTGSDLVPSIVPSAYYSRCEVETPNGLSDRIHAVMSEVDGWCQK EGADDERPAGRWKLEVLLV" assembly_gap 21293974..21294230 /estimated_length=257 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21296929..21299636 /estimated_length=2708 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21300703..21301343 /estimated_length=641 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21324082..21324222 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21327810..>21346503 /locus_tag="PAL_GLEAN10019439" mRNA join(<21327810..21327936,21334504..21334675, 21338122..21338300,21339397..21339476,21345110..21345286, 21345526..21345603,21346342..>21346503) /locus_tag="PAL_GLEAN10019439" /product="V-type proton ATPase subunit d 2" CDS join(21327810..21327936,21334504..21334675, 21338122..21338300,21339397..21339476,21345110..21345286, 21345526..21345603,21346342..21346503) /locus_tag="PAL_GLEAN10019439" /note="GO_component: GO:0033177 - proton-transporting two-sector ATPase complex, proton-transporting domain [Evidence IEA]; GO_function: GO:0015078 - hydrogen ion transmembrane transporter activity [Evidence IEA]; GO_process: GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]" /codon_start=1 /product="V-type proton ATPase subunit d 2" /protein_id="ELK02423.1" /db_xref="InterPro:IPR002843" /db_xref="UniProtKB/Swiss-Prot:Q80SY3" /translation="MESDELSFNVDHGYLEGLVRGCKAGLLSQQDYANLVQCETLEDL KIHLQTTDYGNFLANETNPLTVSKIDTEMRKKLCREFEYFRNHSLEPLSTFLTYTTCG YMIDNVILLMNGALQKKAVKDMLGKCHPLGRFTEMEAVNIAETASDLFQAVLVETPLA PFFQDCMSENTLDELNVEILRNKLYKFEADRRAFTITLNSFGTELSKDDRETLYPTCG KLHPEGLRLLAQAEDFEQMKRVADHYGVYKPLFDAVGDGSGGKSLEDVFYEHEVRMNV LAFNRQFHCGVFYAYTKLKEQEARNVVWIAECISQRHRTKINSYVPIL" gene complement(<21355167..>21365712) /locus_tag="PAL_GLEAN10019442" mRNA complement(join(<21355167..21355433,21357306..21357667, 21365028..>21365712)) /locus_tag="PAL_GLEAN10019442" /product="Solute carrier family 7 member 13" CDS complement(join(21355167..21355433,21357306..21357667, 21365028..21365712)) /locus_tag="PAL_GLEAN10019442" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Solute carrier family 7 member 13" /protein_id="ELK02424.1" /db_xref="InterPro:IPR004841" /db_xref="UniProtKB/Swiss-Prot:Q91WN3" /translation="MYGEKKIQLKRVFGYSWGTSFVMVKIIGAGIFVAPAGVLKYCRM NVGLSLCVWAACSLLALMDALCSAEIGVTFPCSGAHYYFLLRCFGSCVSFLNLWTGLF LGAAVIASQALLLAQYSVQPFYPSCPVPGLPMRCLALAFLWVVGILSSRGVREVAWLQ MASTALKMAILGLISVSGVVLLARGREENMASFRNAFQAEYPDASQLIQAVFQGYFAY SGGGCLTYIAGPVAVAWTHRVLPALAWVIPFGVSASLFSSLLMNVFQSSRVAYTAGRE GQLPALFTMLNRHSSPFPSVLLLVTMASIAVVSMNLIDLINYLNFAVSIWTVLSMIGI LKLRYQEPDLPRPYKVFLPFPLVTMAIGLCLVVIPLVKSPHMRYVYVCLFILSGLLFY VPFIYFKLKLVGFQKMTCYLQLLFNICIPDVSDEQMSEAETVKKK" gene <21372424..>21473369 /locus_tag="PAL_GLEAN10019443" mRNA join(<21372424..21372577,21437767..21437833, 21439969..21440147,21445081..21445393,21451809..21451904, 21453166..21453340,21454675..21454729,21454814..21454898, 21455029..21455157,21457518..21457593,21457700..21457771, 21459553..21459641,21462619..21462778,21464582..21464715, 21464803..21464943,21466191..21466311,21470300..21470404, 21472065..21472161,21472480..21472552,21473270..>21473369) /locus_tag="PAL_GLEAN10019443" /product="NEDD4-like E3 ubiquitin-protein ligase WWP1" CDS join(21372424..21372577,21437767..21437833, 21439969..21440147,21445081..21445393,21451809..21451904, 21453166..21453340,21454675..21454729,21454814..21454898, 21455029..21455157,21457518..21457593,21457700..21457771, 21459553..21459641,21462619..21462778,21464582..21464715, 21464803..21464943,21466191..21466311,21470300..21470404, 21472065..21472161,21472480..21472552,21473270..21473369) /locus_tag="PAL_GLEAN10019443" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO_process: GO:0006464 - protein modification process [Evidence IEA]" /codon_start=1 /product="NEDD4-like E3 ubiquitin-protein ligase WWP1" /protein_id="ELK02425.1" /db_xref="InterPro:IPR000569" /db_xref="InterPro:IPR001202" /db_xref="UniProtKB/Swiss-Prot:Q9H0M0" /translation="MERAASLCELFTTRSGFSGSIRASSYVFPKPVLKDPALRSTASS PNASHLSLEIQQNGDALHENGESPARTATRLAGEGANGIDPVPANTPVQNCCPPVDSG DSAPSPPSQVAARPPDTPAPKPLTSEPAGDSVNRELSSPAATDSASASGTAEVSEDAS APAGDPPVPEVPAASGQSGCAPSDSAARGAGAGSTVDPAPPGSADSPALEAPKSRQPG GGLEPRRQHSGTGSETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVD DRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRNQLQGAMQQFNQRYLYSASMLAA ENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTR EGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSH VKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVL NPMYCLFEYAGKNNYCLQINPASTINPDHLAYFCFIGRFIAMALFHGKFIDTGFSLPF YKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLK LGGANILVTEENKDEYIGLMAEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELE VMLCGMQEVDLADWQRNAVYRHYTRNSKQIVWFWQFVKETDNEVRMRLLQFVTGTCRL PLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIE ETEGFGQE" assembly_gap 21386772..21386828 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21387392..21387437 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21396357..21396933 /estimated_length=577 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21421395..21421406 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21437537..21437583 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21447026..21447046 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21456644..21456694 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21472974..21473049 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<21484532..>21497873) /locus_tag="PAL_GLEAN10019448" mRNA complement(join(<21484532..21484675,21486021..21486110, 21490127..21490286,21491965..21492061, 21497759..>21497873)) /locus_tag="PAL_GLEAN10019448" /product="Regulator of microtubule dynamics protein 1" CDS complement(join(21484532..21484675,21486021..21486110, 21490127..21490286,21491965..21492061,21497759..21497873)) /locus_tag="PAL_GLEAN10019448" /codon_start=1 /product="Regulator of microtubule dynamics protein 1" /protein_id="ELK02426.1" /db_xref="UniProtKB/Swiss-Prot:Q96DB5" /translation="MGNPGAFKRSLIFSALSYLGFETYQVISRTAVVHATAKVLGVEE VLAQADYLYESGETEKLYQLLTQYKDSEDAELLWRLARVSRDVAQLSRTSEAERKLLV YEALEYAKRALEKNEASFAAHKWYAICISDVGDYEGIKAKIANAYVIKEHFETRKLVA GRIMAGFAGEQPLAGPPVRKPQRAPRRSGPRHWLPCTYSRV" assembly_gap 21493751..21493780 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21507801..21507822 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21508521..>21513395 /locus_tag="PAL_GLEAN10019450" mRNA join(<21508521..21508702,21513131..>21513395) /locus_tag="PAL_GLEAN10019450" /product="hypothetical protein" CDS join(21508521..21508702,21513131..21513395) /locus_tag="PAL_GLEAN10019450" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02427.1" /translation="MPVKPELVSARNQRAGPAQLWDGMLDVDPGFPLSIARFYFSPEW HSFRGNEVVLSPAPELKAAAQGVCDLVCAATSATDEGTGPTLPIAASTAPPAAALRRV PTAPAHARWSFCFTREETEGQRFTIRVGIRIREISEHTLWGHYSLG" assembly_gap 21512703..21513119 /estimated_length=417 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21520224..21520265 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21520498..21520522 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21523440..>21547145 /locus_tag="PAL_GLEAN10019451" mRNA join(<21523440..21523571,21523839..21524018, 21525332..21525406,21526592..21526663,21529112..21529195, 21531051..21531140,21535463..21535561,21537686..21537772, 21538416..21538475,21538950..21539083,21542868..21542922, 21543051..21543102,21545187..21545320,21546364..21546600, 21547035..>21547145) /locus_tag="PAL_GLEAN10019451" /product="Copine-3" CDS join(21523440..21523571,21523839..21524018, 21525332..21525406,21526592..21526663,21529112..21529195, 21531051..21531140,21535463..21535561,21537686..21537772, 21538416..21538475,21538950..21539083,21542868..21542922, 21543051..21543102,21545187..21545320,21546364..21546600, 21547035..21547145) /locus_tag="PAL_GLEAN10019451" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Copine-3" /protein_id="ELK02428.1" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR008973" /db_xref="InterPro:IPR010734" /db_xref="InterPro:IPR018029" /db_xref="UniProtKB/Swiss-Prot:O75131" /translation="MAAQCVTKVELNISCDNLLDKDIGSKSDPLCVLFLNTSGQQWYE VERTEKVKNCLNPTFSKTFIIDYYFEVVQKLKFGIYDIDNKTIELGDDDFLGECECTL GQIVSSKKLTRPLVLKNGRPAGKGSITISAEEIKDNRVVLFEMEARKLDNKDLFGKSD PYLEFHKQTSDGNWLMVHRTEVIKNNLNPVWRPFKISLNSLCYGDMDKIIKVECYDYD NDGSHDLIGTFQTTMTKLKEASRSSPVEFECINEKKRQKKKSYKNSGVISVKQCEITV ECTFLDYIMGGCQLNFTVGVDFTGSNGDPRSPDSLHYISPNGVNEYLTAIWSVGLVIQ DYDADKMFPAFGFGAQIPPQWQVSHEFPMSFNPSNPYCNGIQGIVEAYRACLPQIKLY GPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDGVITDLDETRQAIVSAAKLPMS IIIVGVGGADFSAMEFLDGDGGGLRSPSGETAIRDIVQFVPFRQFQNAPREALAQCVL AEVPQQVVGYFNTCKLLPPKNRTAQ" assembly_gap 21526854..21526919 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21544077..21544120 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<21585783..>21604729) /locus_tag="PAL_GLEAN10019454" mRNA complement(join(<21585783..21585898,21588065..21588224, 21590812..21590953,21596660..21596782,21597475..21597539, 21599600..21599724,21604690..>21604729)) /locus_tag="PAL_GLEAN10019454" /product="Cyclic nucleotide-gated cation channel beta-3" CDS complement(join(21585783..21585898,21588065..21588224, 21590812..21590953,21596660..21596782,21597475..21597539, 21599600..21599724,21604690..21604729)) /locus_tag="PAL_GLEAN10019454" /codon_start=1 /product="Cyclic nucleotide-gated cation channel beta-3" /protein_id="ELK02429.1" /db_xref="InterPro:IPR018490" /db_xref="UniProtKB/Swiss-Prot:Q8MJD7" /translation="MAPGVIRVFEEEAGKHSVIVNMLFQQLDVASAMPLDVLCLYFGF NPIFRTNKILKYTSFFEFNHRLESAMDKAYVYRVFRTTGYLLFTLHINACIYYWASAY EGLGTTKWTYNGEGNKYLRCYYWAVRSLITIGGLPDPHTSFEIVFQLLNFFLGVFVFS SLIGQMRDVIGAATANQNSFRICMDHTIAYMNNYSIPKSVQNRVRTWYEYTWDSQRML DESDLLGALPATMQLALAVDVNFGIISKVDLFKASALQ" assembly_gap 21586332..21586496 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21593973..21593998 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21598137..21598221 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21615739..21617103 /estimated_length=1365 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21666712..21666742 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21673439..21673456 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21674868..21674884 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21708700..21708724 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21712834..21713300 /estimated_length=467 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21731605..21731643 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21786115..21786199 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21790161..21790179 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21798603..21798627 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <21845002..>21870158 /locus_tag="PAL_GLEAN10019459" mRNA join(<21845002..21845130,21845174..21845311, 21846427..21846559,21862046..21862155,21864614..21864764, 21870031..>21870158) /locus_tag="PAL_GLEAN10019459" /product="Cyclic nucleotide-binding domain-containing protein 1" CDS join(21845002..21845130,21845174..21845311, 21846427..21846559,21862046..21862155,21864614..21864764, 21870031..21870158) /locus_tag="PAL_GLEAN10019459" /codon_start=1 /product="Cyclic nucleotide-binding domain-containing protein 1" /protein_id="ELK02430.1" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR018490" /db_xref="UniProtKB/Swiss-Prot:Q8NA66" /translation="MTSVVDCADPLLPQAGSATRTSHRGRSRTLADAQSHRHRSFTLL RPWSTFGTLEVSAQFQLDPREFSVVTEEDCEILKIPAKNYAKIKLEKTKFENKQIVKL IRKCPYYEEWPTLSIHELVLLIRWRKFPPGHVIVESGNIISFVAFINSGYCNIYKPIV GLVKLQSKKVKKIRKLVYMGKVKEMESFGEISVLLRVPFTCTVVTGNEVEMAVIEDKD LFVKGLSLKVLVPIAGTRFSPLRIAAPASCLEAAASLSPEHQEA" assembly_gap 21855085..21855171 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21877081..21877160 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21907130..21907193 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21938531..21938984 /estimated_length=454 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21966812..21967142 /estimated_length=331 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21975859..21975886 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21976180..21976225 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 21998719..21998810 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22016891..22017058 /estimated_length=168 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22025352..22025796 /estimated_length=445 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22036534..22036571 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22059234..22059522 /estimated_length=289 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22063971..22064477 /estimated_length=507 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22072643..22072676 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22078999..22079045 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22083478..22083547 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22083783..22083944 /estimated_length=162 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22086830..22086843 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22088732..22088798 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22093947..22094179 /estimated_length=233 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22098696..22098817 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22099468..22101998 /estimated_length=2531 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22102485..22102548 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22112145..22112185 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22112988..22113070 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22113345..22113612 /estimated_length=268 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<22115252..>22219716) /locus_tag="PAL_GLEAN10019463" mRNA complement(join(<22115252..22115586,22120205..22120320, 22124620..22124770,22130210..22130348,22151015..22151226, 22152976..22153137,22167282..22167586,22172739..22172861, 22179600..22179748,22219366..>22219716)) /locus_tag="PAL_GLEAN10019463" /product="Matrix metalloproteinase-16" CDS complement(join(22115252..22115586,22120205..22120320, 22124620..22124770,22130210..22130348,22151015..22151226, 22152976..22153137,22167282..22167586,22172739..22172861, 22179600..22179748,22219366..22219716)) /locus_tag="PAL_GLEAN10019463" /note="GO_component: GO:0031012 - extracellular matrix [Evidence IEA]; GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_function: GO:0008237 - metallopeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Matrix metalloproteinase-16" /protein_id="ELK02431.1" /db_xref="InterPro:IPR000585" /db_xref="InterPro:IPR001818" /db_xref="InterPro:IPR002477" /db_xref="InterPro:IPR006026" /db_xref="InterPro:IPR018487" /db_xref="InterPro:IPR021190" /db_xref="InterPro:IPR021805" /db_xref="UniProtKB/Swiss-Prot:P51512" /translation="MAKNVELRDQGVPAPSFPDAGRHRRPLPTGARGAAAQSPPGASE AASTDLGGLCMEQSLCPVDMGRRASDYRLLGSQKAREGAGHRWTLGVPCGTDSVSFGC VHCRAVLASRPAFTPVWLQKYGYLPAPGPHASALRSAATMQSALAAMQQFYGINTTGR VDPDTLAWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGD PETRKAIRRAFDVWQNVTPLTFEEVPYGELESGRRDADITIIFASGFHGDSSPFDGEG GFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT AIMAPFYQYMDTESFRLPSDDLQGIQKIYGPPDKTPPPTRALPTVPPQRSVPPADPRK NDRPRPPRPPTGRPAAPGAKPSICDGDFNTLAVLRREMFVFKDQWFWRVRNNRVMDGY PMQITYFWRGLPPGIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLVTLGSGVP PHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVWKGVPDSPQGAFVH KENGFTYFYKGKEYWKFNNQMLKVEPGFPRSILKDFMGCDGAMDRDKGGHSPPDDVDI VIKLDNTASTVKAIAIAIPCTLALCLLVLVYTVLQFKRKGAPRHILYCKRSMQEWV" assembly_gap 22118987..22119595 /estimated_length=609 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22119849..22119860 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22132199..22132257 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22140838..22141870 /estimated_length=1033 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22160586..22160602 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22190715..22190726 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22207089..22207146 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22212095..22212367 /estimated_length=273 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22221836..22221846 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22261742..22261828 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22270944..22271555 /estimated_length=612 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22272138..22280583 /estimated_length=8446 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22313600..22313949 /estimated_length=350 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22319848..22320078 /estimated_length=231 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22323800..22323855 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22347830..22347970 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<22349225..>22371619) /locus_tag="PAL_GLEAN10019466" mRNA complement(join(<22349225..22349348,22371372..>22371619)) /locus_tag="PAL_GLEAN10019466" /product="hypothetical protein" CDS complement(join(22349225..22349348,22371372..22371619)) /locus_tag="PAL_GLEAN10019466" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02432.1" /translation="MERTHGAPEPRGAGADVDRHGPWRTRFSELRLLRLNTKPRAFDG VGDGERNGLGADRGVEAPPRRASLTRLASARSLVWRQRHKNTDQTEQSTLAHDMEETV TDAVQVKRSGELTFRDVPHAS" assembly_gap 22370673..22370701 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22382684..22382706 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22385632..22385663 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22387362..22387380 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<22390918..>22391142) /locus_tag="PAL_GLEAN10019467" mRNA complement(<22390918..>22391142) /locus_tag="PAL_GLEAN10019467" /product="hypothetical protein" CDS complement(22390918..22391142) /locus_tag="PAL_GLEAN10019467" /codon_start=1 /product="hypothetical protein" /protein_id="ELK02433.1" /translation="MVKSPACVRVCVSFSKPAMAEHVHCDETRRWPAGEAGSVADACG HLPFRDRAWGSGAGSGGDQTGEQLLFSPVA" assembly_gap 22411976..22412290 /estimated_length=315 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22426019..22426518 /estimated_length=500 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22439695..22439715 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22448871..22449241 /estimated_length=371 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22458434..22458467 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22460804..22460828 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22482151..22483580 /estimated_length=1430 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22529942..22529991 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22559512..22559951 /estimated_length=440 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22599342..22599373 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22606012..22606051 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22624755..22625728 /estimated_length=974 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <22630529..>22646714 /locus_tag="PAL_GLEAN10019470" mRNA join(<22630529..22630684,22633008..22633163, 22635914..22636071,22636764..22636813,22637217..22637378, 22641180..22641265,22642880..22642966,22644055..22644148, 22645661..22645813,22646377..>22646714) /locus_tag="PAL_GLEAN10019470" /product="Receptor-interacting serine/threonine-protein kinase 2" CDS join(<22630529..22630684,22633008..22633163, 22635914..22636071,22636764..22636813,22637217..22637378, 22641180..22641265,22642880..22642966,22644055..22644148, 22645661..22645813,22646377..22646714) /locus_tag="PAL_GLEAN10019470" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0042981 - regulation of apoptosis [Evidence IEA]" /codon_start=1 /product="Receptor-interacting serine/threonine-protein kinase 2" /protein_id="ELK02434.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001315" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011029" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:O43353" /translation="SERNDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNG SLNELLHRKTEYPEVAWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILLDNEFH VKIADFGLSKWRLMSLSQSRSSKSAPEGGTIIYMPPENYEPGQKSRASVKHDIYSYAV IMWEVLSRKQPFEEVTNPLQIMYSVSQGHRPDTSEESLPFDIPHRAVMLALIKAGWAQ NPDERPSFLKCLIELEPVLRTFEEITFFEAVMQLKKTKLRSASSTVHLHDKKTELSLS VSLKHGPQEESCGSLQPPKSGGSPGTSRSLSAPQDNEPSSRKSQDFMQHHHPANHSWD SNMSAARRTALCDHRTAPCSLAAVNPLSAEGHAEGSQPGVAQQWVQMKREDIVSQMTE ACLNQSLDALLSRDLIMKEDYELISTKPTRTAKVRQLLDTTDIQGEEFARVIVQKLKD NKQMGLQPYPETLTVSHPLSLNLFQNKSL" assembly_gap 22683082..22683885 /estimated_length=804 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <22687930..>22697599 /locus_tag="PAL_GLEAN10019471" mRNA join(<22687930..22687996,22691170..22691264, 22691807..22691998,22694416..22694507,22696576..>22697599) /locus_tag="PAL_GLEAN10019471" /product="Oxidative stress-induced growth inhibitor 2" CDS join(22687930..22687996,22691170..22691264, 22691807..22691998,22694416..22694507,22696576..22697599) /locus_tag="PAL_GLEAN10019471" /codon_start=1 /product="Oxidative stress-induced growth inhibitor 2" /protein_id="ELK02435.1" /db_xref="UniProtKB/Swiss-Prot:Q9Y236" /translation="MPLVEETSLLEDSSVTLPVVIIGYRPYLSSEAIHPNTILHSKLE EARHLSIVDQDLEYLSEGLEGRSSNPVAVLFDTLLHPDADFGYDYPSVLHWKLERHHY IPHLVLGKGPPGGAWHNMEGSMLTISFGNWMELPGLKFKDWMSSKRRNLKADRVLPEE VARYYKHYVKAMGLQKNFRENTHITSVSRLYRGPDGSDGQDRDVAAQRLQIEKSKFTR RNWEIRGYQRVADGSHAPFCLFAENVALATGTLDSPAHLQIEGEDFPFVFHSMPEFGA AVSKGKLRGKVDPVLIVGSGLTAADAVLCAYNSNIPVIHVFRRRATDPSLIFKQLPKK LYPEYHKVYHMMCTQSYSADSNLLSDYTSFPEHHVLSFKSDMKCILQSVSGLKKIFKL SAAVVLIGSHPNLSFLKEQGCYLGHNSSQPITCKGNPVEIDPYTYECVQEAHLFALGP LVGDNFVRFLKGGALGVTRCLATRQKKKHLFVERGDGVA" assembly_gap 22692318..22692371 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22706701..22706733 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<22708132..>22735396) /locus_tag="PAL_GLEAN10019472" mRNA complement(join(<22708132..22708267,22708440..22708489, 22712310..22712423,22714350..22714505,22715689..22715760, 22718631..22719069,22720647..22720919,22721906..22722035, 22724248..22724535,22725388..22725485,22728044..22728243, 22728726..22728843,22730742..22730845,22732440..22732599, 22733010..22733158,22733889..22734019, 22735360..>22735396)) /locus_tag="PAL_GLEAN10019472" /product="Nibrin" CDS complement(join(22708132..22708267,22708440..22708489, 22712310..22712423,22714350..22714505,22715689..22715760, 22718631..22719069,22720647..22720919,22721906..22722035, 22724248..22724535,22725388..22725485,22728044..22728243, 22728726..22728843,22730742..22730845,22732440..22732599, 22733010..22733158,22733889..22734019,22735360..22735396)) /locus_tag="PAL_GLEAN10019472" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Nibrin" /protein_id="ELK02436.1" /db_xref="InterPro:IPR000253" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR008984" /db_xref="InterPro:IPR013908" /db_xref="UniProtKB/Swiss-Prot:Q5RCV3" /translation="MWKLLPAAGPAREPYRLLTGVEYVVGRKNCGILIENDQSISRNH AVLTANFSVTNLSQIDEIPVLTIKDNSKYGTFVNEEKMQNDLSCTLKPGDRITFGVYE SKFRVEYERLVACSSCLDVSGKMALNQAILNLGGLTANNWTEECTHLVMKSVKVTIKT ICALICGRPIVKPEYFTEFLKAVQSKEQLPQIESFYPPIDEPAIGSNNIDLSGRQERK QIFKGKTFVFLDARQHKKLSSAVVFGGGDARLVTEDSGEDDGFFSAPGTCVVDVGGAG PGSQTSASDAQRARAHAILGLLHRQGLRPIPEAEIGLAVVFMTTENYCDPRGQPSLDA KNLWVRRSGEGLSLRGAFCANRGDILAVNFSPFLFSQDLKFFLCSFCSRGLMPSLLTA TALFEPSISFLEGCLIAPEQVLSPQSSPQLMLCFAAGSKAPTAGPGLAQDLSVKEKLM PGAPANKMTCAAHTESEQADTRVDLSERPKEMQISGVEQKFRMPSRETSTVKEPTKIN SDNSAVTSGAVARTNTPACQLSPTQPSGGSRRAQASWRLQPNSIRNYFQPSAKKRERD EENQEISSKSARIEMSCSLLEETQPATPSMWKNNEQPLPHNEPVGKKPDHLFTDRDLK PTVKNSANKSLSTEKLKSEKRTIDDLAIEDEVLEQLFKDTKPELEIEVKAQKQEEDGN VRKRPRLDVETNGSFNDERISECNRVSQENEIGKKCELKKELLWSTKEEPSSSDGLPE DGELLPARVLLTEFRSLVVGDSASRSAAGVSGDYGQTKNFKKFRKVAFPGAGKLPQII GGSDLIAHHARKNTELEEWLRQELEVQNQQAKEESLADDLFSTSSLGSPDIDGITGGA DSVDRTTGYGKSARGIQAKKLLEPGEFG" assembly_gap 22709328..22709452 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22713385..22713428 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22737701..22738584 /estimated_length=884 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22740450..22740607 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <22740668..>22759134 /locus_tag="PAL_GLEAN10019473" mRNA join(<22740668..22740718,22747483..22747682, 22748822..22748879,22748998..22749084,22749885..22750032, 22753998..22754097,22756332..22756404,22758354..22758500, 22758935..22758997,22759075..>22759134) /locus_tag="PAL_GLEAN10019473" /product="2,4-dienoyl-CoA reductase, mitochondrial" CDS join(22740668..22740718,22747483..22747682, 22748822..22748879,22748998..22749084,22749885..22750032, 22753998..22754097,22756332..22756404,22758354..22758500, 22758935..22758997,22759075..22759134) /locus_tag="PAL_GLEAN10019473" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="2,4-dienoyl-CoA reductase, mitochondrial" /protein_id="ELK02437.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="UniProtKB/Swiss-Prot:Q16698" /translation="MALLGRASSPPGRGLRRFFSYGTKMYQDSEAFSSKFFPPLQKAM LPPNSFQGKVAFITGGGTGLGRGMTALLSSLGAQCVIASRKIDVLKAAADQISSQTGN KVHAIQCDVRDPDMVQNTVSELISVAGHPDIVINNAAGNFISPTERLSPNAWKTITDI VLNGTAFVTLAVGKQLIEAQRGAAFLAITTVYAETGSGFVVPSASAKAGVEALSKSLA AEWAKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKDWIERIPCGRLGTVEELANLAAF LCSDYASWINGAVIRFDGGEQSLISGELNDLRKVTKEQWDTIEGLIRKTKGS" gene complement(<22764975..>22784316) /locus_tag="PAL_GLEAN10019476" mRNA complement(join(<22764975..22765088,22765411..22765482, 22769120..22769197,22771890..22771946,22779821..22779895, 22783710..22783786,22784238..>22784316)) /locus_tag="PAL_GLEAN10019476" /product="Calbindin" CDS complement(join(22764975..22765088,22765411..22765482, 22769120..22769197,22771890..22771946,22779821..22779895, 22783710..22783786,22784238..22784316)) /locus_tag="PAL_GLEAN10019476" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="Calbindin" /protein_id="ELK02438.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR018248" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:P04467" /translation="MAESHLQSPLITASQFFEIWLHFDADGSGYLEGKELQNLIHELQ QARKKAGLELSPEMKTFVDQYGQRDDGKIGIVETWRKYDTDHSGFIETEELKNFLKDL LEKANKAVDDAKLAEYTDLMDGNGYIDENELDALLKDLCEKNKQDLDTNNIPTYKKSI MALSDGGKLYRTDLALILCAEDN" assembly_gap 22766309..22766318 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22767749..22767789 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22769245..22770084 /estimated_length=840 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22772062..22772298 /estimated_length=237 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22784348..22784466 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22787174..22787197 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22788177..22788206 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22795122..22795190 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22804516..22804611 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22810235..22810451 /estimated_length=217 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22820241..22820459 /estimated_length=219 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22823609..22823857 /estimated_length=249 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22825897..22826448 /estimated_length=552 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22832983..22833726 /estimated_length=744 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22833991..22834199 /estimated_length=209 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22836587..22836740 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22840374..22840789 /estimated_length=416 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22844856..22845207 /estimated_length=352 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22847397..22847956 /estimated_length=560 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22865671..22865706 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22867711..22868145 /estimated_length=435 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22873550..22875189 /estimated_length=1640 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22877236..22877251 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22878402..22878591 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22880320..22880329 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22880864..22880879 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22883938..22884670 /estimated_length=733 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22885928..22885959 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<22890567..>22899538) /locus_tag="PAL_GLEAN10019479" mRNA complement(join(<22890567..22890755,22893103..22893258, 22899326..>22899538)) /locus_tag="PAL_GLEAN10019479" /product="Transmembrane protein 64" CDS complement(join(22890567..22890755,22893103..22893258, 22899326..22899538)) /locus_tag="PAL_GLEAN10019479" /codon_start=1 /product="Transmembrane protein 64" /protein_id="ELK02439.1" /db_xref="InterPro:IPR015414" /db_xref="UniProtKB/Swiss-Prot:Q6YI46" /translation="MGLMVVGVLLGTCVAHVVCRRLLAARVVARIQSSERLSAVIRVV EGAGGLKVVALARLTPIPFGLQNAVFSMTGLPLPSYLMASSAGLLPTQLLNSYLGTTL RTMEDVIAEQSVSGYFVFCLQIIVSVGLMFYVVHRAQVELDAAIAACETELKSSPGKG GQPNAGGPSLYTKRTVPPGGGVNIV" assembly_gap 22899764..22900969 /estimated_length=1206 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22903861..22903976 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22917638..22918004 /estimated_length=367 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22931897..22933141 /estimated_length=1245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22934032..22934043 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22939307..22939719 /estimated_length=413 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22952679..22952698 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22955356..22955391 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22958514..22959082 /estimated_length=569 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 22976302..22976626 /estimated_length=325 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <22985014..>23004999 /locus_tag="PAL_GLEAN10019481" mRNA join(<22985014..22985046,22985485..22985675, 22990138..22990259,22992215..22992291,22999068..22999180, 23002075..23002152,23004933..>23004999) /locus_tag="PAL_GLEAN10019481" /product="N-terminal EF-hand calcium-binding protein 1" CDS join(22985014..22985046,22985485..22985675, 22990138..22990259,22992215..22992291,22999068..22999180, 23002075..23002152,23004933..23004999) /locus_tag="PAL_GLEAN10019481" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0017000 - antibiotic biosynthetic process [Evidence IEA]" /codon_start=1 /product="N-terminal EF-hand calcium-binding protein 1" /protein_id="ELK02440.1" /db_xref="InterPro:IPR007138" /db_xref="InterPro:IPR011008" /db_xref="UniProtKB/Swiss-Prot:Q8N987" /translation="MLQARRVLKCEDYQEASSLEQFVTRFLLKETLSQLQSLQNSLEC AMETTEEQTRQERQVQCARVASFMALRVAEQRGPSTPEVLSTQRPGRRSGRRVQRFGG FSPGGPQLVASSPGFLEEDSRWATQIDRLQRLIDRLEKKHILLVQRQMAVVEEDARDF QLALKHYADGAAAQSGCLRISIQKLSNESRYMIYEFWENSNLWNSFMVDPEQQLDVPR ASPVLTRM" assembly_gap 23002249..23002260 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 23027402..23027810 /estimated_length=409 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 23029073..23029110 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<23030773..>23056850) /locus_tag="PAL_GLEAN10019482" mRNA complement(join(<23030773..23030916,23031734..23031824, 23040087..23040139,23044527..23044650,23045677..23045783, 23050567..23050715,23056748..>23056850)) /locus_tag="PAL_GLEAN10019482" /product="Transmembrane protein 55A" CDS complement(join(23030773..23030916,23031734..23031824, 23040087..23040139,23044527..23044650,23045677..23045783, 23050567..23050715,23056748..23056850)) /locus_tag="PAL_GLEAN10019482" /codon_start=1 /product="Transmembrane protein 55A" /protein_id="ELK02441.1" /db_xref="InterPro:IPR019178" /db_xref="UniProtKB/Swiss-Prot:Q3SZ48" /translation="MNRNRPLGDLGEECTRRSEQQELFEDKEDCGLEHAELPPPYTAI ASPDASGVPAVNCRVCQSLIGLDGKLHQHVVKCTVCNEATPIKNPPAGKKYVRCPCNC LLICKDTSRRIGCPRPNCRRIINLGPVMPVSEEQPAQPALPVQPEGTRVVCGHCGNTF LWMELRFNTLAKCPHCKKISSVGSALPRRRCCAYITIGMICIFVGVGLTVGTQDFARR FHATYVSWAIAYLLGSICLIRACYWGAIRVSYPEHSFA" assembly_gap 23042260..23043152 /estimated_length=893 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(ALWS01106432.1:1..24941,gap(25),ALWS01106433.1:1..41486, gap(283),ALWS01106434.1:1..2896,gap(979),ALWS01106435.1:1..3044, gap(14),ALWS01106436.1:1..45524,gap(58),ALWS01106437.1:1..4033, gap(115),ALWS01106438.1:1..28392,gap(92),ALWS01106439.1:1..10922, gap(23),ALWS01106440.1:1..11828,gap(93),ALWS01106441.1:1..21300, gap(23),ALWS01106442.1:1..15936,gap(32),ALWS01106443.1:1..4869, gap(19),ALWS01106444.1:1..1841,gap(311),ALWS01106445.1:1..20583, gap(145),ALWS01106446.1:1..20497,gap(594),ALWS01106447.1:1..58459, gap(89),ALWS01106448.1:1..2521,gap(19),ALWS01106449.1:1..8897, gap(50),ALWS01106450.1:1..30189,gap(187),ALWS01106451.1:1..46047, gap(605),ALWS01106452.1:1..14680,gap(62),ALWS01106453.1:1..978, gap(23),ALWS01106454.1:1..40443,gap(52),ALWS01106455.1:1..5599, gap(69),ALWS01106456.1:1..110019,gap(89),ALWS01106457.1:1..4515, gap(201),ALWS01106458.1:1..20339,gap(29),ALWS01106459.1:1..4602, gap(172),ALWS01106460.1:1..40689,gap(14),ALWS01106461.1:1..16553, gap(7679),ALWS01106462.1:1..19706,gap(74),ALWS01106463.1:1..13619, gap(54),ALWS01106464.1:1..10876,gap(22),ALWS01106465.1:1..16413, gap(257),ALWS01106466.1:1..23164,gap(875),ALWS01106467.1:1..31879, gap(12),ALWS01106468.1:1..22280,gap(37),ALWS01106469.1:1..13295, gap(1997),ALWS01106470.1:1..20643,gap(81),ALWS01106471.1:1..16622, gap(1542),ALWS01106472.1:1..36706,gap(97),ALWS01106473.1:1..3980, gap(133),ALWS01106474.1:1..4435,gap(126),ALWS01106475.1:1..32899, gap(58),ALWS01106476.1:1..28965,gap(3151),ALWS01106477.1:1..20442, gap(80),ALWS01106478.1:1..11063,gap(251),ALWS01106479.1:1..8560, gap(582),ALWS01106480.1:1..27740,gap(603),ALWS01106481.1:1..19752, gap(46),ALWS01106482.1:1..44313,gap(68),ALWS01106483.1:1..36948, gap(58),ALWS01106484.1:1..24214,gap(12),ALWS01106485.1:1..24883, gap(31),ALWS01106486.1:1..2299,gap(40),ALWS01106487.1:1..30738, gap(13),ALWS01106488.1:1..3675,gap(952),ALWS01106489.1:1..20741, gap(30),ALWS01106490.1:1..17548,gap(182),ALWS01106491.1:1..2934, gap(932),ALWS01106492.1:1..27798,gap(446),ALWS01106493.1:1..11442, gap(43),ALWS01106494.1:1..16671,gap(33),ALWS01106495.1:1..883, gap(2041),ALWS01106496.1:1..14094,gap(27),ALWS01106497.1:1..34508, gap(23),ALWS01106498.1:1..4508,gap(29),ALWS01106499.1:1..11898, gap(85),ALWS01106500.1:1..11950,gap(67),ALWS01106501.1:1..10742, gap(15),ALWS01106502.1:1..10857,gap(33),ALWS01106503.1:1..3298, gap(46),ALWS01106504.1:1..1373,gap(24),ALWS01106505.1:1..3331, gap(51),ALWS01106506.1:1..18445,gap(28),ALWS01106507.1:1..117001, gap(151),ALWS01106508.1:1..2249,gap(29),ALWS01106509.1:1..66949, gap(67),ALWS01106510.1:1..256,gap(31),ALWS01106511.1:1..11459, gap(4243),ALWS01106512.1:1..33756,gap(11),ALWS01106513.1:1..10829, gap(99),ALWS01106514.1:1..22027,gap(1520),ALWS01106515.1:1..31968, gap(670),ALWS01106516.1:1..1187,gap(185),ALWS01106517.1:1..5567, gap(18),ALWS01106518.1:1..88800,gap(94),ALWS01106519.1:1..13733, gap(21),ALWS01106520.1:1..18675,gap(32),ALWS01106521.1:1..19939, gap(157),ALWS01106522.1:1..6470,gap(21),ALWS01106523.1:1..2270, gap(131),ALWS01106524.1:1..2022,gap(51),ALWS01106525.1:1..3101, gap(134),ALWS01106526.1:1..10723,gap(21),ALWS01106527.1:1..45469, gap(30),ALWS01106528.1:1..4316,gap(40),ALWS01106529.1:1..1125, gap(56),ALWS01106530.1:1..37639,gap(95),ALWS01106531.1:1..65414, gap(436),ALWS01106532.1:1..2674,gap(972),ALWS01106533.1:1..67278, gap(123),ALWS01106534.1:1..16531,gap(10),ALWS01106535.1:1..8902, gap(926),ALWS01106536.1:1..5198,gap(49),ALWS01106537.1:1..27851, gap(53),ALWS01106538.1:1..11708,gap(457),ALWS01106539.1:1..10440, gap(95),ALWS01106540.1:1..1663,gap(2246),ALWS01106541.1:1..26766, gap(11),ALWS01106542.1:1..50927,gap(396),ALWS01106543.1:1..5170, gap(13),ALWS01106544.1:1..6483,gap(65),ALWS01106545.1:1..69079, gap(84),ALWS01106546.1:1..13266,gap(2545),ALWS01106547.1:1..29179, gap(38),ALWS01106548.1:1..19040,gap(22),ALWS01106549.1:1..21763, gap(20),ALWS01106550.1:1..8698,gap(124),ALWS01106551.1:1..15015, gap(136),ALWS01106552.1:1..28204,gap(4492),ALWS01106553.1:1..10016, gap(75),ALWS01106554.1:1..8026,gap(527),ALWS01106555.1:1..159417, gap(21),ALWS01106556.1:1..11621,gap(51),ALWS01106557.1:1..33313, gap(27),ALWS01106558.1:1..35381,gap(21),ALWS01106559.1:1..9050, gap(15),ALWS01106560.1:1..25676,gap(22),ALWS01106561.1:1..18220, gap(25),ALWS01106562.1:1..1877,gap(27),ALWS01106563.1:1..13365, gap(6669),ALWS01106564.1:1..5771,gap(35),ALWS01106565.1:1..44219, gap(14),ALWS01106566.1:1..8668,gap(12),ALWS01106567.1:1..20011, gap(146),ALWS01106568.1:1..10042,gap(908),ALWS01106569.1:1..40542, gap(974),ALWS01106570.1:1..17554,gap(136),ALWS01106571.1:1..29802, gap(48),ALWS01106572.1:1..60877,gap(32),ALWS01106573.1:1..13541, gap(619),ALWS01106574.1:1..10887,gap(68),ALWS01106575.1:1..14214, gap(20),ALWS01106576.1:1..27059,gap(100),ALWS01106577.1:1..77711, gap(13),ALWS01106578.1:1..31852,gap(1158),ALWS01106579.1:1..3080, gap(1177),ALWS01106580.1:1..3184,gap(62),ALWS01106581.1:1..4900, gap(36),ALWS01106582.1:1..9005,gap(269),ALWS01106583.1:1..6024, gap(112),ALWS01106584.1:1..6399,gap(427),ALWS01106585.1:1..50192, gap(17),ALWS01106586.1:1..18175,gap(383),ALWS01106587.1:1..16828, gap(185),ALWS01106588.1:1..7785,gap(327),ALWS01106589.1:1..13519, gap(4153),ALWS01106590.1:1..5585,gap(4088),ALWS01106591.1:1..3652, gap(51),ALWS01106592.1:1..1002,gap(245),ALWS01106593.1:1..5130, gap(110),ALWS01106594.1:1..20224,gap(42),ALWS01106595.1:1..39853, gap(38),ALWS01106596.1:1..27385,gap(1244),ALWS01106597.1:1..2267, gap(59),ALWS01106598.1:1..13961,gap(27),ALWS01106599.1:1..33619, gap(20),ALWS01106600.1:1..7303,gap(67),ALWS01106601.1:1..34487, gap(21),ALWS01106602.1:1..18099,gap(2318),ALWS01106603.1:1..26570, gap(339),ALWS01106604.1:1..6192,gap(51),ALWS01106605.1:1..49711, gap(19),ALWS01106606.1:1..2513,gap(109),ALWS01106607.1:1..9041, gap(30),ALWS01106608.1:1..8481,gap(25),ALWS01106609.1:1..83073, gap(42),ALWS01106610.1:1..2266,gap(22),ALWS01106611.1:1..1341, gap(39),ALWS01106612.1:1..3911,gap(58),ALWS01106613.1:1..6284, gap(59),ALWS01106614.1:1..31254,gap(100),ALWS01106615.1:1..37902, gap(94),ALWS01106616.1:1..5628,gap(34),ALWS01106617.1:1..18770, gap(428),ALWS01106618.1:1..13745,gap(35),ALWS01106619.1:1..12590, gap(33),ALWS01106620.1:1..6371,gap(29),ALWS01106621.1:1..617, gap(37),ALWS01106622.1:1..11269,gap(105),ALWS01106623.1:1..12991, gap(53),ALWS01106624.1:1..74287,gap(58),ALWS01106625.1:1..2631, gap(45),ALWS01106626.1:1..25321,gap(43),ALWS01106627.1:1..46306, gap(984),ALWS01106628.1:1..11784,gap(95),ALWS01106629.1:1..12448, gap(234),ALWS01106630.1:1..27270,gap(1364),ALWS01106631.1:1..26592, gap(104),ALWS01106632.1:1..7028,gap(27),ALWS01106633.1:1..24989, gap(18),ALWS01106634.1:1..4956,gap(111),ALWS01106635.1:1..16282, gap(83),ALWS01106636.1:1..1263,gap(10),ALWS01106637.1:1..21689, gap(79),ALWS01106638.1:1..17166,gap(17),ALWS01106639.1:1..1036, gap(19),ALWS01106640.1:1..22166,gap(74),ALWS01106641.1:1..438, gap(419),ALWS01106642.1:1..2318,gap(30),ALWS01106643.1:1..8915, gap(129),ALWS01106644.1:1..34494,gap(122),ALWS01106645.1:1..28429, gap(472),ALWS01106646.1:1..6604,gap(26),ALWS01106647.1:1..9280, gap(70),ALWS01106648.1:1..11757,gap(151),ALWS01106649.1:1..20700, gap(45),ALWS01106650.1:1..2484,gap(19),ALWS01106651.1:1..75840, gap(567),ALWS01106652.1:1..7269,gap(62),ALWS01106653.1:1..13849, gap(33),ALWS01106654.1:1..67887,gap(104),ALWS01106655.1:1..17763, gap(15),ALWS01106656.1:1..11604,gap(1054),ALWS01106657.1:1..13025, gap(120),ALWS01106658.1:1..52181,gap(21),ALWS01106659.1:1..28356, gap(43),ALWS01106660.1:1..13743,gap(983),ALWS01106661.1:1..6171, gap(87),ALWS01106662.1:1..2027,gap(16),ALWS01106663.1:1..25221, gap(2381),ALWS01106664.1:1..8036,gap(71),ALWS01106665.1:1..98012, gap(1818),ALWS01106666.1:1..4851,gap(15),ALWS01106667.1:1..18738, gap(24),ALWS01106668.1:1..26772,gap(29),ALWS01106669.1:1..34688, gap(29),ALWS01106670.1:1..26803,gap(214),ALWS01106671.1:1..6160, gap(10),ALWS01106672.1:1..35237,gap(12),ALWS01106673.1:1..74118, gap(205),ALWS01106674.1:1..60138,gap(22),ALWS01106675.1:1..6375, gap(45),ALWS01106676.1:1..81106,gap(360),ALWS01106677.1:1..440, gap(73),ALWS01106678.1:1..6627,gap(48),ALWS01106679.1:1..11876, gap(10),ALWS01106680.1:1..43698,gap(212),ALWS01106681.1:1..4533, gap(44),ALWS01106682.1:1..15660,gap(494),ALWS01106683.1:1..40892, gap(25),ALWS01106684.1:1..43786,gap(48),ALWS01106685.1:1..17043, gap(191),ALWS01106686.1:1..81566,gap(26),ALWS01106687.1:1..3374, gap(16),ALWS01106688.1:1..34502,gap(99),ALWS01106689.1:1..35853, gap(61),ALWS01106690.1:1..7067,gap(71),ALWS01106691.1:1..26904, gap(33),ALWS01106692.1:1..9990,gap(19),ALWS01106693.1:1..26452, gap(1151),ALWS01106694.1:1..18795,gap(80),ALWS01106695.1:1..14213, gap(51),ALWS01106696.1:1..18808,gap(42),ALWS01106697.1:1..10305, 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