LOCUS KB031078 15954802 bp DNA linear CON 19-MAR-2015 DEFINITION Pteropus alecto unplaced genomic scaffold scaffold57, whole genome shotgun sequence. ACCESSION KB031078 ALWS01000000 VERSION KB031078.1 DBLINK BioProject: PRJNA171993 BioSample: SAMN01103203 KEYWORDS WGS. SOURCE Pteropus alecto (black flying fox) ORGANISM Pteropus alecto Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus. REFERENCE 1 (bases 1 to 15954802) AUTHORS Zhang,G., Cowled,C., Shi,Z., Huang,Z., Bishop-Lilly,K.A., Fang,X., Wynne,J.W., Xiong,Z., Baker,M.L., Zhao,W., Tachedjian,M., Zhu,Y., Zhou,P., Jiang,X., Ng,J., Yang,L., Wu,L., Xiao,J., Feng,Y., Chen,Y., Sun,X., Zhang,Y., Marsh,G.A., Crameri,G., Broder,C.C., Frey,K.G., Wang,L.F. and Wang,J. TITLE Comparative analysis of bat genomes provides insight into the evolution of flight and immunity JOURNAL Science 339 (6118), 456-460 (2013) PUBMED 23258410 REFERENCE 2 (bases 1 to 15954802) AUTHORS Zhang,G., Cowled,C. and Wang,L. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.06 Genome Coverage :: 110x Sequencing Technology :: Illumina HighSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..15954802 /organism="Pteropus alecto" /mol_type="genomic DNA" /submitter_seqid="scaffold57" /db_xref="taxon:9402" /chromosome="Unknown" /sex="male" /tissue_type="kidney" /geo_loc_name="Australia: Anglican Church Grammer School, East Brisbane" /collection_date="Nov-2008" assembly_gap 751..1298 /estimated_length=548 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6663..7979 /estimated_length=1317 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10429..10563 /estimated_length=135 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17030..17059 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 39989..40616 /estimated_length=628 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 49091..52154 /estimated_length=3064 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <64458..>112615 /locus_tag="PAL_GLEAN10016033" mRNA join(<64458..65282,81767..82277,84000..84268,89352..90495, 96040..96183,105732..105786,106857..106950,107552..107632, 109425..109533,111732..112009,112193..>112615) /locus_tag="PAL_GLEAN10016033" /product="Beta-klotho" CDS join(64458..65282,81767..82277,84000..84268,89352..90495, 96040..96183,105732..105786,106857..106950,107552..107632, 109425..109533,111732..112009,112193..112615) /locus_tag="PAL_GLEAN10016033" /note="GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0044267 - cellular protein metabolic process [Evidence IEA]" /codon_start=1 /product="Beta-klotho" /protein_id="ELK03611.1" /db_xref="InterPro:IPR001360" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/Swiss-Prot:Q86Z14" /translation="MKPGCAAGSPGNEWIFFGTNERNICYRKTMSNAGLQRYVILSAF ILLRAVTGFSGDGRAIWSKNPNYSPVNESQLFLYDTFPKNFFWGVGTGAFQVEGNWKT DGKGPSIWDYFIHTHLKNVNSTNSSSDSYVFLEKDLSALDFIGVSVYQFSISWPRLFP DGIVAVANTKGLQYYNTLLDALVLRNIEPIVTLYHWDLPLALQEKYGGWKNETIIDIF NDYATYCFQMFGDRVKYWITIHNPYLVAWHGYGTGMHAPGEKGNLTAIYTVGHNLIKA HSKVWHNYNRNFRPRQKGWLSITLGSHWIEPNRSENMMDILKCQQSMVSVLGWFANPI HGDGDYPEVMKKRLLSVLPLFSEAEKNEVRGTADFFAFSFGPNNFKPQNTMAKMGQNV SLNLREVLNWIKLEYGNPQILITENGWFTDSHVKTEDTTAIYMMKNFLNQVLQAIRFD EIRVFGYTVWSLLDGFEWQDAYTTRRGLFYVDFNSKQKERKPKSSAHYYKQIIQENGF TLKESTPDVQGQFPCDFSWGVTESVLKPELVASSPQFTDPHLYVWNVTGNRLLHPVEG VRLKTRPGQCSDFVSIKRQLEMLTRMKVTHYRFALDWPSILPTGNLSIVNRQALRYYR CVVSEGQKFNISTMVTLYYPTHAHLGLPTPLLQSGGWLNPSMAKSFQDYAGLCFQELG DLVKLWITINEPNRLSDIYNRTSNDTYRAAHNLLMAHALAWHLYDQQYRPAQHGAVSL SLHSDWAEPANPYADSHWQAAERFLQFEIAWFAEPLFKTGDYPLAMREYIAFKNRHGL SSSTLPHFTEEEKRLVKGAADFYALNHFTTRFVMHARQNGSRYDADRDVQFLQDITCL SSPTRLAVLPWGERKVLSWIQKNYGNVDVYITANGIDDQSLENDELRKYYLEKYIQEA LKAYLVDKVKIKGYYAFKLTEEKSKPRFGFYTSDFKAKSSTNFYNKLISNNKSTWDEY KGNLKRQKGERLRLPPWLKTEIPMGKNYNKLKKTLRNLNLHTVCEEARCPNIGECWGG GEYATATATIMTARKPPPPDANEPYNTAKAIAEWNLDYVVLTSVDRDDVANNSNEEAR DGTITATVLARSVAKEGFEKISKSANPVEIRKGVMFTVDAIIAEFTKQSKFVTTSEEI AQVATISANGDQKIGNIISDTMKKFIVPALEIASAHRKPLVIIAEDDDGEALSTLVLN RLKIGPQVVAVKAPDFGDNRKNQLKDMAIDTGSALIGKEGLTLNLEDIQPRDLGKVSK IIVTKNNAMLLKRKGDMVQIEKYIGKTLPVVVLKVGGTNDVEVNEKTE" assembly_gap 81088..81122 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 94789..95924 /estimated_length=1136 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 100839..100886 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <112781..>113062 /locus_tag="PAL_GLEAN10016035" mRNA <112781..>113062 /locus_tag="PAL_GLEAN10016035" /product="60 kDa heat shock protein, mitochondrial" CDS 112781..113062 /locus_tag="PAL_GLEAN10016035" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0044267 - cellular protein metabolic process [Evidence IEA]" /codon_start=1 /product="60 kDa heat shock protein, mitochondrial" /protein_id="ELK03612.1" /db_xref="InterPro:IPR002423" /db_xref="UniProtKB/Swiss-Prot:Q5NVM5" /translation="MTIAKNADVEGSLIVEKIMQSSFEVDYDTVLVDFVNMVGKGIID PTNVVRTALLDATGVASLLTTAKIVVTEIPKEEKDPGIGSMGGMRSIMV" assembly_gap 114335..114402 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<127709..>150854) /locus_tag="PAL_GLEAN10016036" mRNA complement(join(<127709..127819,128648..128758, 128873..128964,129373..129506,129737..129867, 131320..131414,133304..133451,133917..134114, 134420..134620,137276..137377,143210..143378, 150706..>150854)) /locus_tag="PAL_GLEAN10016036" /product="UDP-glucose 6-dehydrogenase" CDS complement(join(127709..127819,128648..128758, 128873..128964,129373..129506,129737..129867, 131320..131414,133304..133451,133917..134114, 134420..134620,137276..137377,143210..143378, 150706..150854)) /locus_tag="PAL_GLEAN10016036" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_function: GO:0051287 - NAD or NADH binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="UDP-glucose 6-dehydrogenase" /protein_id="ELK03613.1" /db_xref="InterPro:IPR001732" /db_xref="InterPro:IPR008927" /db_xref="InterPro:IPR014026" /db_xref="InterPro:IPR014027" /db_xref="UniProtKB/Swiss-Prot:O60701" /translation="MWRERSRGVRAARGSFLCLVPGFPSHDPHLLFWTLSGNRPLDLL PWGWDSIMMFEIKKICCIGAGYVGGPTCSVIAQMCPEIRVTVVDVNESRINAWNSPTL PIYEPGLKEVVESCRGKNLFFSINIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKY IEACARRIVQNSHGYKIVTEKSTVPVRAAESIRQIFDANTKPNLNLQVLSNPEFLAEG TAIKDLKNPDRVLIGGDETPEGQIAVQALCAVYEHWVPKEKILTTNTWSSELSKLAAN AFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVL NLVYLCEALNLPEVAHYWQQVIDINDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKK DTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTIS KDPYEACDGAHAVVICTEWDMFKELDYEHIHKKMLKPAFIFDGRRVLDGLHNELQTIG FQIETIGKKVSSKRIPYAPSSEIPKFSLQDPPNKKPKV" gene complement(<151288..>151533) /locus_tag="PAL_GLEAN10016037" mRNA complement(<151288..>151533) /locus_tag="PAL_GLEAN10016037" /product="hypothetical protein" CDS complement(151288..151533) /locus_tag="PAL_GLEAN10016037" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03614.1" /translation="MPDLQAAGETEKEGRDIPVTSGLSRTRIPTLRVWLAWRARGTTS APTVSQDRDTGGKRVQKTRLPLIVVYHEPGPQSSSES" gene complement(<171848..>235250) /locus_tag="PAL_GLEAN10016038" mRNA complement(join(<171848..171880,173994..174136, 212727..212742,214132..214241,235148..>235250)) /locus_tag="PAL_GLEAN10016038" /product="hypothetical protein" CDS complement(join(171848..171880,173994..174136, 212727..212742,214132..214241,235148..235250)) /locus_tag="PAL_GLEAN10016038" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03615.1" /db_xref="InterPro:IPR020309" /db_xref="UniProtKB/Swiss-Prot:Q2KIK3" /translation="MATFRLEAITNSQFIEAGYGSDSSSNPTFMNYSFDLNSQVKSRW IIMAEGGFDPCECVCSHEHAMRRLINLQSWFEVPGPSVDNGISITMILMAWMVIAVIL FLLRPPNLRGSNLTGKPTSPHNGQDPPAPPVD" assembly_gap 187679..189368 /estimated_length=1690 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 195136..195206 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 206639..206684 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 211382..212029 /estimated_length=648 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 217845..217861 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 232873..232903 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 239499..239725 /estimated_length=227 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <277734..>330647 /locus_tag="PAL_GLEAN10016039" mRNA join(<277734..277886,304034..304107,312816..312867, 320996..321078,329162..329261,330124..330252, 330573..>330647) /locus_tag="PAL_GLEAN10016039" /product="Ubiquitin-conjugating enzyme E2 K" CDS join(277734..277886,304034..304107,312816..312867, 320996..321078,329162..329261,330124..330252, 330573..330647) /locus_tag="PAL_GLEAN10016039" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO_process: GO:0043687 - post-translational protein modification [Evidence IEA]" /codon_start=1 /product="Ubiquitin-conjugating enzyme E2 K" /protein_id="ELK03616.1" /db_xref="InterPro:IPR000449" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR009060" /db_xref="InterPro:IPR015940" /db_xref="InterPro:IPR016135" /db_xref="UniProtKB/Swiss-Prot:P61087" /translation="MANIAVQRIKREFKEVLKSEEVRNELPDIPTSAQGGRALPAATP NIPRNPQVLPFPLKNWISEGEASPPTRLQHARYQLEIKIPETYPFNPPKVRFITKIWH PNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPE MFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSWDVETATELL LSN" assembly_gap 290344..292554 /estimated_length=2211 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 296675..297116 /estimated_length=442 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 326439..326504 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<354269..>420767) /locus_tag="PAL_GLEAN10016040" mRNA complement(join(<354269..354625,355862..355970, 356990..357135,357869..357931,360244..360363, 360924..361056,366132..366246,366731..366935, 367081..367204,369742..369878,370991..371059, 372920..373078,373883..374006,376250..376410, 378111..378216,385987..386102,392478..392617, 392855..392903,394211..394292,399678..399791, 401241..401392,403483..403628,404495..404589, 406547..406662,409975..410115,411956..412036, 414544..414670,418734..418831,420564..>420767)) /locus_tag="PAL_GLEAN10016040" /product="Sister chromatid cohesion protein PDS5 like protein A" CDS complement(join(354269..354625,355862..355970, 356990..357135,357869..357931,360244..360363, 360924..361056,366132..366246,366731..366935, 367081..367204,369742..369878,370991..371059, 372920..373078,373883..374006,376250..376410, 378111..378216,385987..386102,392478..392617, 392855..392903,394211..394292,399678..399791, 401241..401392,403483..403628,404495..404589, 406547..406662,409975..410115,411956..412036, 414544..414670,418734..418831,420564..420767)) /locus_tag="PAL_GLEAN10016040" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Sister chromatid cohesion protein PDS5 like protein A" /protein_id="ELK03617.1" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q29RF7" /translation="MIVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLV ACCLADIFRIYAPEAPYTSHDKLKNLAWVKSYNICFELEDCNEIFIQLFRTLFSVINN SHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRT VQTIEACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKS NDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCL MNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLD KRWRVRKEAMMGLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEK IFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQ PASEANCSAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSC KQADVCVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEG TADDEEEGVSPDTAIRSGLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAI QIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQLAQI FEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTG EKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGD LTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI FAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMA TEKLLSLLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSH AFMKKMAENIKLTKDAQSPDESKTNEKLYTVCDVALCVINSKSALCNADSPKDPVLPM KFFTQPEKDFCNDKSYISEETRVLLLTGKPKPAGVLGAVNKPLSATGRKPYVRSTGAE TGSNININSELNSSTGNRSREQSSEAAETGVSENEENPVRIISVTPVKNIDPVKNKEI NSDQATQGNISSDRGKKRIVTAAGAENIQQKTDEKADESGPPTPSKPRRGRRPKSESQ GNATKNDDINKSLSKGRKRAAVSQESPGGLEAGNAKAPKLQDVAKKAAPAERQIDLQR " assembly_gap 383396..383420 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 393120..393295 /estimated_length=176 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<446594..>455142) /locus_tag="PAL_GLEAN10016041" mRNA complement(join(<446594..446794,455005..>455142)) /locus_tag="PAL_GLEAN10016041" /product="Poly(rC)-binding protein 2" CDS complement(join(446594..446794,455005..455142)) /locus_tag="PAL_GLEAN10016041" /codon_start=1 /product="Poly(rC)-binding protein 2" /protein_id="ELK03618.1" /db_xref="UniProtKB/Swiss-Prot:Q61990" /translation="MDFTTQPKPATALCGVVSADGKIAYPPGVKEITDKITTDEMIKR LKGPPLDSCTIQSQYAIPQPDLTKLHQLAMQQSHFPMTHANTRSSADLDASAQTTSHE LTIPNDLLAA" assembly_gap 447530..447540 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 454065..454216 /estimated_length=152 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 456142..456260 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 456936..456974 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 485852..485897 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 505346..505412 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 509428..509468 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 515885..515925 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 518545..518557 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 526050..526372 /estimated_length=323 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 527805..528565 /estimated_length=761 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <536852..>599289 /locus_tag="PAL_GLEAN10016042" mRNA join(<536852..537080,540914..542045,544624..544748, 547997..548085,552378..552454,561549..563893, 565600..565685,570230..570348,585868..586006, 590892..591080,592047..592215,597843..597966, 599244..>599289) /locus_tag="PAL_GLEAN10016042" /product="NEDD4-binding protein 2" CDS join(536852..537080,540914..542045,544624..544748, 547997..548085,552378..552454,561549..563893, 565600..565685,570230..570348,585868..586006, 590892..591080,592047..592215,597843..597966, 599244..599289) /locus_tag="PAL_GLEAN10016042" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="NEDD4-binding protein 2" /protein_id="ELK03619.1" /db_xref="InterPro:IPR002625" /db_xref="InterPro:IPR003892" /db_xref="InterPro:IPR009060" /db_xref="InterPro:IPR013899" /db_xref="UniProtKB/Swiss-Prot:Q86UW6" /translation="MPRRRKNLGGNPFRKTANSKEVVVSSVASHEEPTTTLPSICERK VDQEELFTSISEMFSDLDPDVVYLMLSECDFKVENAMDCLLELSATDTKIEQSSSKSS IASENQVSAARHEIMDKCPPEEESEDSKMDSFLDVQLTEDLDSLIQNAFEKLNSSPDD QVYSCLPLQNVNSLGDLSAFINSDSSSMTPVLCTQNMDLNSENLENSASLLSSNPLTS HSASNESKSVIKYNTLEDSLLSNSLSAVNDTMVDCNNLNQREKELLESECVEAQFSET PVDLDANEPQAPLNVQNPGLGLLGIGGDQKSTSIPDVFVPSEEFNFKAHNHSELPPKE KDVNYCPVLTPLPLLLPPPPPPMWNPMIPAFDLFQGNHGFVAPVVTTAAHWRPVNYTF PPPVISHTSPTKVWRSKEGKSAYQIQETPVSQVVRKKTSSYVGLVLILLRGLPGSGKS FLARTLQEDNPSGVILSTDDYFYINGQYQFDVKYLGEAHEWNQNRAKEAFEKKLSPII IDNTNLQAWEMKPYVALSQKYKYKVLFREPDTWWKFKPKELASPRENEDTTSEKEENV FSSSLKHIELSEEKTLEVTKETMLLENVTCLSNAYLNKERKERSGMNPHIQSAFIQEV SDMYFSDSESKVQVTDKSKKEEQVEMVSEKEYNKTDADSFIERMPPNISYSENNQEVF DLSNSISLQNENSSPGEILEEKAMVKKNAFGKQKSKSTLEKFPRHELSNFVGDWPVDK TFGQRTKRNRKTEKASSVESYKKCNISPSCKVLDNSLSVNVDHIQQGVSPHESVEDDK KSQCDDASESFGSYNCDSYKNTEKNSLDIVGEWPLSDSLAQREHRSRMPKSGLNEPNL EFGTNDNTHEACWSTSPEELKTLGSCILGNSEMLPSEMMCENKTCPSEKIHGQYTLSL TVINSAPTIPGVVRPQTLTEFPEGKPKEVPEIEVGMCTQTEPQDFALLWKIEKNKISV SDSVRVLTGRLDGFNPKAFNINTKLDIQETIPYRVMYDKSTFVEESELTSTDESENLN ILCKLFGSFSLEALKDLYERCNKDIIWATSLLLDSETKLCDDTEFENIQKSYDEAQIG PFSLGLNLKEIINQRGILKDSSSSVPEFRHAVGITDTNVQSSCYSEKGNSEQAEIRAI TTEKPGLITCVFPGATVDLKNTNEVIPNSQAELSGLYNNQSFSGTLKVKDVSEMEKNL EVIEIGDSMHSLNLSDILNSVSSTSDLELKEIYSTDSFEIKKNENLPKNYVKFPKTEE FMNEDEKKMEKVLMAGSTMSAGVSEEGKTEMMNPTPVMAKSLTIDCLELALPPELAFQ LNELFGPVGIDSGSLTVEDCVVHIDLNLAKVIHEKWKESVMKREPLMFDKDCATKLKE RQLFKIFPAINQNFLVDIFKDHNYSLEHTVQFLNCVLEGDPVKTVVAHEFVHQNENVT SHTAQKSKEKKAKKSRETDDVSSEPSFQDFEYPKYDDYRAEAFLHQQKRMECYSKAKE AYRMGKKNVATFYAQQGSLHEQKMKEANHLAAMEIFEKVNASLLPQNVLDLHGLHVDE AIEHLMTVLQQKTEEFKQDGGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHSFRFS EIKPGCLKVMLK" assembly_gap 543408..543417 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 561165..561226 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 575236..576518 /estimated_length=1283 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 596391..596411 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 610517..613078 /estimated_length=2562 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 620829..622765 /estimated_length=1937 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 668062..668132 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 670276..670359 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <674136..>674711 /locus_tag="PAL_GLEAN10016043" mRNA <674136..>674711 /locus_tag="PAL_GLEAN10016043" /product="Rho-related GTP-binding protein RhoH" CDS 674136..674711 /locus_tag="PAL_GLEAN10016043" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="Rho-related GTP-binding protein RhoH" /protein_id="ELK03620.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR013753" /db_xref="UniProtKB/Swiss-Prot:Q9D3G9" /translation="MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVD VFMDGIQISLGLWDTAGNDAFKSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEI RSNLPCTPVLVVATQTDQREMGPHRASCISAIEGKRLAQDVRAKGYLECSALSNRGVQ QVFECAVRTAVNQARRRNRRKLFSINECKIF" assembly_gap 691304..691381 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 697232..697319 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 724505..724516 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 725608..725730 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 731129..731271 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 733597..733780 /estimated_length=184 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 740439..744332 /estimated_length=3894 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <752002..>764165 /locus_tag="PAL_GLEAN10016044" mRNA join(<752002..752047,754475..754620,755542..755696, 759640..760172,763624..>764165) /locus_tag="PAL_GLEAN10016044" /product="Neuronal acetylcholine receptor subunit alpha-9" CDS join(752002..752047,754475..754620,755542..755696, 759640..760172,763624..764165) /locus_tag="PAL_GLEAN10016044" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_component: GO:0045211 - postsynaptic membrane [Evidence IEA]; GO_function: GO:0004889 - nicotinic acetylcholine-activated cation-selective channel activity [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]" /codon_start=1 /product="Neuronal acetylcholine receptor subunit alpha-9" /protein_id="ELK03621.1" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:Q9UGM1" /translation="MGDYFFKETLNFEFPAVETADGKYAQKLFRDLFEDYSNALRPVE DTDKVLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIP SDLVWRPDIVLYNKADDESSEPVNTNVVLRYDGLITWDAPVITKSSCVVDVTYFPFDN QQCNLTFGSWTYNGNQVDIFNSLDSGDLSDFIEDVEWEVHGMPAVKNVISYGCCSEPY PDVTFTLLLKRRSSFYIVNLLIPCILISFLAPLSFYLPAASGEKVSLGVTILLAMTVF QLMVAEIMPASENVPLIGKYYIATMALITASTALTIMVMNIHFCGSEARPVPHWARVV ILKYMSRILFVYDVGESCLSLHHNKERDCIMKVYGKLPEPNLKTARYKHPPRKKEMNK LLKNDLEYEGENQQDGGSYCARYKVLTRNIEYIAKCLKDHKATNSKGGEWKKVAKVID RFFMWIFFIMVFVMTILIIARAD" assembly_gap 753599..753613 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 756561..756611 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 757141..757194 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 801723..801737 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<814357..>823882) /locus_tag="PAL_GLEAN10016045" mRNA complement(join(<814357..814577,819078..819281, 821720..821926,822778..>823882)) /locus_tag="PAL_GLEAN10016045" /product="RNA-binding protein 47" CDS complement(join(814357..814577,819078..819281, 821720..821926,822778..823882)) /locus_tag="PAL_GLEAN10016045" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="RNA-binding protein 47" /protein_id="ELK03622.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q91WT8" /translation="MSSDSTAASSAKVPEGVAGAPNEAALLALLERTGYSMVQENGQR KYGGPPPGWEGAHPQRGCEVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMDFDGKNR GYAFVMYCHKNEAKRAVRELNNYEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILE EIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIA VDWAEPEIDVDEDVMETVKILYVRNLMIETTEDTIKKIFGQFNPGCVERVKKIRDYAF VHFASREDAVHAMNNLNGTELEGSCLEVTLAKPVDKEQYSRYQKAAKGGGAAEAAAAA QQPSYVYSCDPYTLAYYGYPYNALVGPNRDYFVKAGSLRGRGRGAAGNRAPGPRGSYL GGYSAGRGIYSRYHEGKGKQQEKGYELVPNLEISTVNPVAIKPGTVAIPAIGAQYSMF QAAPAPKIIEDGKIHAVEHMISPIAVQPDPASAAAAAAAAAXXXXXXXXXATTFPVYT MAPNVQRIPAAGIYGASYVPFAAPATATITTLQKNAAAAAAVYGGYAGYIPQAFPAAA IQVPIHDVYQTY" assembly_gap 819094..819121 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 826462..826517 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 837514..837564 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 857683..857706 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 868834..868931 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 886999..887025 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 906838..906871 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 932005..932029 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 951825..951949 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 953224..953269 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 974464..974681 /estimated_length=218 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1023810..1023826 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1027502..1031757 /estimated_length=4256 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1043694..1043853 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1044384..>1070813 /locus_tag="PAL_GLEAN10016046" mRNA join(<1044384..1044693,1051143..1051201,1051589..1051719, 1054494..1054646,1054980..1055163,1056274..1056484, 1059713..1059856,1062747..1062848,1064435..1064552, 1069557..1069680,1070175..>1070813) /locus_tag="PAL_GLEAN10016046" /product="Putative methyltransferase NSUN7" CDS join(1044384..1044693,1051143..1051201,1051589..1051719, 1054494..1054646,1054980..1055163,1056274..1056484, 1059713..1059856,1062747..1062848,1064435..1064552, 1069557..1069680,1070175..1070813) /locus_tag="PAL_GLEAN10016046" /codon_start=1 /product="Putative methyltransferase NSUN7" /protein_id="ELK03623.1" /db_xref="InterPro:IPR001678" /db_xref="UniProtKB/Swiss-Prot:Q8NE18" /translation="MLNSTNELQFSSENTEEISRLASLALSDDATSSEKNSPGLLEKT GYPDSVYVMAANIFQGIRIEKSPEKVLIKYGNEPLRSSSESEDESLQRLSYELAFSAL KYQDILETILIDSYIFPSTTIPDHLSSLIIVMLYDFQDRKFQARFLSDNEESVAEVQE VENLLNSFKTKLAAALARCRIKHDALSIYNILPETVRNQELRASTLPLYAWINTCKIS PEEVYHSLKKKGYNKVKSVLHIDDKIFAVDQHCYDVLIFPSHLKNDLLNIDLFKDYKL IFQDKSRSLAVHSVKALLNMDDDILMVNTGSWYTVAHMSILTNNNTSKIFVCGVQSQA KHPDLKNLFTKMGCKNIEILHETFLNIESKDIRLQKVKVILLLPRCSGLGVSNPVEFI LNEHEDTGLLKDFSQGGTSEDKLHVLAQQQYEQLTHAMKFTKAQAVVYCTCSVYPEEN EAVVKKALEFQDHGIKVQPYRLSPPVLPLCSLKEIHLSTDKFFRMEPSEITNGCFLSV LTRERDPSETVSVKDVLARAAAKGLLDGIELGKSSKREKKKKKSKTSLPKASTTDSNG IQMKIAEFLSRETDAKANRLETSTTKTSAPPKNTIQVACSSQVRKPSKPVTNPLVPTF MKNTSPSRPHQRQANFVRPRPEDKMVVLKPVEIVLPPVMLPFSNPQGIRPQIPTQNFY YRWVGPKTVVPSYLSTPSVSRKGEKPKENLPSSLLRRPRPWL" assembly_gap 1045864..1045893 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1067918..1068283 /estimated_length=366 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1077126..>1255086) /locus_tag="PAL_GLEAN10016047" mRNA complement(join(<1077126..1077293,1081003..1081182, 1082766..1082881,1084518..1084601,1085336..1085423, 1088601..1088715,1146852..1146979,1150114..1150260, 1176880..1176940,1177030..1177115,1185878..1186086, 1254303..>1255086)) /locus_tag="PAL_GLEAN10016047" /product="Amyloid beta A4 precursor protein-binding family B member 2" CDS complement(join(1077126..1077293,1081003..1081182, 1082766..1082881,1084518..1084601,1085336..1085423, 1088601..1088715,1146852..1146979,1150114..1150260, 1176880..1176940,1177030..1177115,1185878..1186086, 1254303..1255086)) /locus_tag="PAL_GLEAN10016047" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Amyloid beta A4 precursor protein-binding family B member 2" /protein_id="ELK03624.1" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR006020" /db_xref="UniProtKB/Swiss-Prot:Q92870" /translation="MASSGTTDVTNRSSPATPPNTLNLRSSHNELLNAEIKHTETKNS TPPKCRKKYALTNIQAAMGLSDPAAQPLLGNGSANIKLVKNGENQLRKAAEQGQQDPN KNVSPTAVINITSEKLEGKEPHPQDSSGCDILPSQPRRTKSFLNYYADLETSTRELEQ NLGSQHAVVEEKSQPGQGQASTVIGNGDLLLQKPNKPQCSPEDGQVATVSSSPETKKD HPKTGAKTDCALHRIQNLAPSDEESSWTTLSQDSASPSSPDETADIWSDHSFQTDPDL PPGWKRINDIAGTYYWHIPTGTTQWERPVSIPADLRSSRKGSLSSVTSSPTPENEDLH AATVNPDPSLKEFEGATLRYASLKLRNAPHADDDDSCSINSDPEAKCFAVRSLGWVEM AEEDLAPGKSSVAVNNCIRQLSYCKNDIRDTVGIWGEGKDMYLILENDMLSLVDPMDR TVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEIC SKIMAERKNAKALACSSLQERTNVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKP VGIDTLNNAIESLMTSSNKEDWPSVNMNVADATVTVISEKSEEEVLVECRVRFLSFMG VGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKV RPPPPPADSVTRRVTTNVKRGVLSLIDTLKQKRPVTETP" assembly_gap 1084993..1085077 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1115193..1115232 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1118513..1123428 /estimated_length=4916 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1142991..1143051 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1170807..1171898 /estimated_length=1092 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1178802..1178937 /estimated_length=136 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1188551..1188611 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1196830..1196861 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1220629..1220657 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1229789..1231970 /estimated_length=2182 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1285650..1286750 /estimated_length=1101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1319620..1319681 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1360717..1360730 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1363435..1363472 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1402042..1402142 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1434446..1434557 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1448972..1451925 /estimated_length=2954 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1463457..>1474193 /locus_tag="PAL_GLEAN10016049" mRNA join(<1463457..1463489,1463603..1464205,1467062..1467212, 1469251..1469336,1469414..1469461,1470173..1470239, 1471072..1471196,1474107..>1474193) /locus_tag="PAL_GLEAN10016049" /product="Ubiquitin carboxyl-terminal hydrolase isozyme L1" CDS join(1463457..1463489,1463603..1464205,1467062..1467212, 1469251..1469336,1469414..1469461,1470173..1470239, 1471072..1471196,1474107..1474193) /locus_tag="PAL_GLEAN10016049" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]" /codon_start=1 /product="Ubiquitin carboxyl-terminal hydrolase isozyme L1" /protein_id="ELK03625.1" /db_xref="InterPro:IPR001578" /db_xref="UniProtKB/Swiss-Prot:Q9GM50" /translation="MQLKPMEINPEMLNKVSGDSCGLCPPPPKRQGGGAHRLRPFRRD VATPCAVQQRRAGARSGQPPSAPTSGAEVKLRNWWGMDGGGGGDCAQIRAPGRAPEGV ERAEPTRAPGLRESHVWAALCAVSSLRRGVGRGLLLSSRGGAHCAEPAPPPPLDCLRG PGRLVSSPQVLARLGVAGQWRFVDVLGLEDEALSSVPAPACALLLLFPLTAQHENFRK KQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFDDGSVLRQFLSETE KLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELGWTGT GARNHAEKIDMPGVFVTDGRMPFPVNHGSSSEDLLLQDAAKVCREFTEREQGEVRFSA VALCKAA" assembly_gap 1473136..1473158 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1482559..1482577 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1484905..1486180 /estimated_length=1276 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1504243..1504264 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1507763..1508561 /estimated_length=799 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1521833..1522122 /estimated_length=290 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1522472..1524326 /estimated_length=1855 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1537963..1539697 /estimated_length=1735 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1563555..1563797 /estimated_length=243 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1687651..1688264 /estimated_length=614 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1710956..1710987 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1718253..1718270 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1724241..1724272 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1768664..1771044 /estimated_length=2381 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1779001..>1876477 /locus_tag="PAL_GLEAN10016050" mRNA join(<1779001..1779107,1783460..1783490,1785418..1785528, 1792262..1792457,1797281..1797533,1798619..1798885, 1805507..1805809,1808234..1808476,1808991..1809320, 1810611..1810775,1820510..1820636,1822393..1822550, 1822764..1823172,1826179..1826394,1844457..1844547, 1845684..1845847,1848688..1848793,1854868..1854908, 1858814..1858897,1861507..1861599,1862466..1862570, 1863452..1863576,1865128..1865249,1865519..1865642, 1867609..1867686,1869247..1869355,1871600..1871702, 1876452..>1876477) /locus_tag="PAL_GLEAN10016050" /product="LIM and calponin like proteiny domains-containing protein 1" CDS join(<1779001..1779107,1783460..1783490,1785418..1785528, 1792262..1792457,1797281..1797533,1798619..1798885, 1805507..1805809,1808234..1808476,1808991..1809320, 1810611..1810775,1820510..1820636,1822393..1822550, 1822764..1823172,1826179..1826394,1844457..1844547, 1845684..1845847,1848688..1848793,1854868..1854908, 1858814..1858897,1861507..1861599,1862466..1862570, 1863452..1863576,1865128..1865249,1865519..1865642, 1867609..1867686,1869247..1869355,1871600..1871702, 1876452..1876477) /locus_tag="PAL_GLEAN10016050" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="LIM and calponin like proteiny domains-containing protein 1" /protein_id="ELK03626.1" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR001781" /db_xref="UniProtKB/Swiss-Prot:Q9UPQ0" /translation="DNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYSRKL KNVLVTIYWLGKAANSCTSYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYID CWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPH RKLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKVEREEYRKS WSTATSPLGGERPFSNPETIEEEGSEVGSPCEDDPVGQMDPGGKPSDGGLELPICSGK EQPPPEGAVVAQVPKFEEKDAAEIQKRRRLEQAGIKVMPAAQRFASQKQLSDEKEAVR DIILRKENPFLTYQHSKDSESEDEVACRLPDLEKDDFAARRTRMNQTKPVVPLSQLLY GPYRKKEAEKSDSSKQLSKKISEKKSLEYKRNQGPTEDVKSMVTCIMRAQESAPEEER LRKVPDIYKDDLAQRRIQGRLAPHREAPSFVTVCNITEADLETWERLKVSGKTRDGDV EHICAPEPSPEIKAETAIRDDFASRKARAYKKPSGPRQKFVHFGPVTEIDQQKWKRLS IGKAGPREDVEEVISHSSKIQTYSVSSASAAASSLEEDQMLNPQNDCRIVSSGIDDNC QSVSQLTSVLESQEEHVCSSGACSKRTEEGEEQRFLPPQQVKDGRSTSMFDMRCEEEA TVQPHSRARQEQLQLINNQLREEDDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKL LAGEDGTSERRKSIKTYREIVQEKERRERELHEAYKNAQSQEEAEGILQQYIERFTIS EAVLERLEMPKILERSHSTEPNTSSFLNDPNPMKYLRQQSLPPPKFTATVETTIAHTS ILDTSMSAGSGSPSKTITPKAVPMLTPKPYSQPKNSQEVLKTFKVDGKVSMNGKTVHG DEEKERECPTAILAPSLTKSQMFEGVARVHGSSMELEQDNNSIEINIKKPNSVPQALT ATIEETEPNSQEDENGGEKPEKGNTELASSEPQHFTTTVTRSSPTVAFVEFSSSPKLK SDVPEEENQKKPENEMSGKVELVLSQKVVKPKSPEPEATLMFPFLDKMPETNQLHLPN LNSQVDSPSNEKSPVTTPQFKFWAWDPEEERRRQEKWQQEQERLLQERYQKEQNKLKE EWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSADQLSTSFSMTEGSGTVNKMD LENCQEEQDTRQKKSFQGDNNDLLFKTRESDPVEEEGSLIQGALTDSENPISKGNYQD DQLDTEAGAPRCEVNPQLAQDPSQNQQLSNPPMNILEDVKPKTLPLDKSINHQVESPS ERRKKSPQENFQVGHLSPCPPTPPGQSPNRSISGKKLCSSCGLPLGKGAAMIIETLNL YFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRSAGQPTTL" assembly_gap 1873559..1873608 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1875730..1875794 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1916673..1919597 /estimated_length=2925 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1949692..1949997 /estimated_length=306 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1957128..1957303 /estimated_length=176 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1958631..1958662 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2008832..2008847 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2013400..2013426 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2020490..2020560 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2021463..2021510 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2046383..2046408 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2053729..2057506 /estimated_length=3778 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2075138..>2088393 /locus_tag="PAL_GLEAN10016053" mRNA join(<2075138..2075182,2077967..2078061,2078522..2078709, 2079816..2079883,2080822..2080955,2084264..2084347, 2088264..>2088393) /locus_tag="PAL_GLEAN10016053" /product="Transmembrane protein 33" CDS join(2075138..2075182,2077967..2078061,2078522..2078709, 2079816..2079883,2080822..2080955,2084264..2084347, 2088264..2088393) /locus_tag="PAL_GLEAN10016053" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Transmembrane protein 33" /protein_id="ELK03627.1" /db_xref="InterPro:IPR005344" /db_xref="UniProtKB/Swiss-Prot:P57088" /translation="MADTAPNGPQGTGAVQFMMTNKLDTAMWLSRLFTVYCSALFVLP LLGLHEAASFYQRALLANALTSALRLHQRLPHFQLSRAFLAQALLEDSCHYLLYSLIF VNSYPVTMSIFPVLLFSLLHAATYTKKVLDAKGSNSLPLLRSILDKLSANQQNILKFI ACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSSRRNPYCRTLFNELRIIVEHI IMKPACPLFVRRLCLQSIAFISRLAPTVA" assembly_gap 2091623..2091641 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2118464..>2185976 /locus_tag="PAL_GLEAN10016054" mRNA join(<2118464..2118575,2125389..2125556,2135010..2135072, 2137784..2137883,2139541..2139633,2140263..2140345, 2148063..2148121,2153263..2153330,2155460..2155562, 2162747..2162802,2165222..2165357,2168543..2168582, 2169389..2169460,2171681..2171788,2174016..2174181, 2178442..2178571,2179960..2180073,2185932..>2185976) /locus_tag="PAL_GLEAN10016054" /product="Zinc transporter 9" CDS join(2118464..2118575,2125389..2125556,2135010..2135072, 2137784..2137883,2139541..2139633,2140263..2140345, 2148063..2148121,2153263..2153330,2155460..2155562, 2162747..2162802,2165222..2165357,2168543..2168582, 2169389..2169460,2171681..2171788,2174016..2174181, 2178442..2178571,2179960..2180073,2185932..2185976) /locus_tag="PAL_GLEAN10016054" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO_process: GO:0006812 - cation transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Zinc transporter 9" /protein_id="ELK03628.1" /db_xref="InterPro:IPR002524" /db_xref="InterPro:IPR009061" /db_xref="UniProtKB/Swiss-Prot:Q6PML9" /translation="MLPGLAAAAAAHRCSWSSLCRLRLRCRAAARVFSERQEWQNLAT FGNVSNMVPCSHPCFCTLNQVKLYSTNVQKEGQGSQTLRVKKVPSFDEAAENIGAELK APLMKQEPLQVRVKAVLKKREYGPKYTQNNFITGVRAINEFCLKSSDLEQLRKIRRRS PHEDTESFTVYLRSDVEAKSLEVWGSPEALAREKKLRKEAEIEYRERLFRNQKILREY RDFLGNTKPRSRMTSVFFKGPGKVVMVAICINGLNCCFKFLAWIYTGSASMFSEAVHS LSDTCNQGLLAVGISKSIQTPDPTHPYGFSNMRYIASLISGVGIFMMGAGLSWYHGIM GLLNPQPMESLLWAYCILAGSLVSEGATLLVAVNELRRSARAKGISFYKYVMESRDPS TNVILLEDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLIYTNTE ALLGRSIQPEQVQRLTELLENDPSVRAIHDVKATDLGLGKVRFKAEVDFDGRVVTRSY LEKQDFDQMLQEIQEVKTSEELETFMLKHGENIIDTLGAEVDRLEKELKKRNPEVRHV DLEIL" assembly_gap 2132596..2132651 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2169811..2170330 /estimated_length=520 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2173340..2173391 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2193732..2193821 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2195018..2198107 /estimated_length=3090 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2204083..2204194 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2212258..2213502 /estimated_length=1245 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2232908..>2253034) /locus_tag="PAL_GLEAN10016055" mRNA complement(join(<2232908..2233125,2237750..2237990, 2242338..2242429,2252065..2252631,2252950..>2253034)) /locus_tag="PAL_GLEAN10016055" /product="BEN domain-containing protein 4" CDS complement(join(2232908..2233125,2237750..2237990, 2242338..2242429,2252065..2252631,2252950..2253034)) /locus_tag="PAL_GLEAN10016055" /codon_start=1 /product="BEN domain-containing protein 4" /protein_id="ELK03629.1" /db_xref="InterPro:IPR018379" /db_xref="UniProtKB/Swiss-Prot:Q6ZU67" /translation="MIALSPSVNEELSLQWLARFIKDINEAKESRMILDAFAQQCSRV LSLLNCGGKLLDSSHSQSMISYVKQEGSSYTERQEQCHIGKGVHSQTSDNVDIEMQYM QRKQQTSAFLRVFTDSLQNYLLSGSFPTPNPSSVSEYGHLADVDPLSTSPVHTLGGWT SPATSESHGHPSSSTLPEEEEEEEEEGYCPRCQELEQEVISLQQENEELRRKLESIPV PCQTVLDYLKTVLQHHNQLMIPQPADQPTEGSKQLLNNYPVYITSKQWDEAVNSSKKD GRRLLRYLIRFVFTTDELKYSCGLGKRKRSVQSGETGPERRPLDPVKVTCLREFIRMH CTSNPDWWMPSEEQINKVFSDAVGHARQGRAVGTFLHNGGSFYEGIDHQASQDEVFNK NSQDGSGD" assembly_gap 2234573..2235641 /estimated_length=1069 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2242881..2242898 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2259428..>2259730) /locus_tag="PAL_GLEAN10016056" mRNA complement(<2259428..>2259730) /locus_tag="PAL_GLEAN10016056" /product="hypothetical protein" CDS complement(2259428..2259730) /locus_tag="PAL_GLEAN10016056" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03630.1" /translation="MRWNWRSPLGPTSGKETSRPSSQPREPRRSRPSIHNTPYGVGHG YAAGPAPRSFWAGACGNASLGANTPGYKILIHYREPEGGPLGKGQVSYPAAGMEMG" assembly_gap 2260632..2260744 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2279082..2279119 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2391725..2391739 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2404934..2406015 /estimated_length=1082 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2424145..>2427503 /locus_tag="PAL_GLEAN10016057" mRNA join(<2424145..2424421,2427064..>2427503) /locus_tag="PAL_GLEAN10016057" /product="Protein shisa-3 like protein" CDS join(2424145..2424421,2427064..2427503) /locus_tag="PAL_GLEAN10016057" /codon_start=1 /product="Protein shisa-3 like protein" /protein_id="ELK03631.1" /db_xref="UniProtKB/Swiss-Prot:Q3UPR0" /translation="MGALLALCLLLCWMRWGPAGAQQPGEYCHGWVDLQGNYHEGFQC PEDFDTLDATICCGSCALRYCCAAADARLEQGGCTNDRGELEHPGITAQPVYVPFLIV GSIFIAFIILGSLVAIYCCTCLRPKEPSQQPIRFSLRSYQRETLPMILTSTNLRAPSR QSSTATSSSSTGGSIRRFSFARAEPGCLVPSPPPPYTTGHPIHLTQPSGFLVSPQYFA YPLQQEPPLPGKTCPDFSSS" assembly_gap 2425582..2425606 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2434240..2434265 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2438590..>2653485) /locus_tag="PAL_GLEAN10016058" mRNA complement(join(<2438590..2438687,2439833..2439924, 2446668..2446760,2447614..2447702,2465182..2465289, 2466237..2466293,2468540..2468601,2473615..2473693, 2476810..2476932,2477037..2477111,2483527..2483637, 2483730..2483913,2498725..2498897,2515697..2515761, 2518829..2518967,2534408..2534547,2540418..2540502, 2549224..2549293,2553560..2553609,2557782..2557864, 2559022..2559127,2561289..2561361,2574877..2574965, 2575900..2575977,2580954..2581081,2582220..2582385, 2583686..2583797,2587473..2587600,2589268..2589337, 2595138..2595211,2601086..2601126,2616637..2616682, 2624712..2624810,2626082..2626181,2627414..2627528, 2653134..>2653485)) /locus_tag="PAL_GLEAN10016058" /product="Putative phospholipid-transporting ATPase IA" CDS complement(join(2438590..2438687,2439833..2439924, 2446668..2446760,2447614..2447702,2465182..2465289, 2466237..2466293,2468540..2468601,2473615..2473693, 2476810..2476932,2477037..2477111,2483527..2483637, 2483730..2483913,2498725..2498897,2515697..2515761, 2518829..2518967,2534408..2534547,2540418..2540502, 2549224..2549293,2553560..2553609,2557782..2557864, 2559022..2559127,2561289..2561361,2574877..2574965, 2575900..2575977,2580954..2581081,2582220..2582385, 2583686..2583797,2587473..2587600,2589268..2589337, 2595138..2595211,2601086..2601126,2616637..2616682, 2624712..2624810,2626082..2626181,2627414..2627528, 2653134..2653485)) /locus_tag="PAL_GLEAN10016058" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO_function: GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO_process: GO:0006754 - ATP biosynthetic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Putative phospholipid-transporting ATPase IA" /protein_id="ELK03632.1" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023306" /db_xref="UniProtKB/Swiss-Prot:P70704" /translation="MSARPGHPSPGAGARAPPFFFPYMLRLSPSRPLRGCRESSPRSA AGATFVASSCCCWSAGALPAAALPWVGGGAPAAAERSAPRTDRCRVWAEDPPAAAAKM PTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKY NIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEI IEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSS EPQAMCYIETSNLDGETNLKIRQGLPLTSDIKDIDSLMRISGRIECESPNRHLYDFVG NIRLDGHGTVPLGADQILLRGTQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVE RITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWYLNLHYGGANNFGLNFLTFII LFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQVKYIF SDKTGTLTCNVMQFKKCTIAGVAYGQSSQLGDEKTFSDSSLLENLQNNHPTAPIICEF LTMMAVCHTAVPEREGDKIIYQAASPDEGALVRAAKQLNFVFTGRTPDSVIIDSLGQE ERYELLNVLEFTSARKRMSVIVRTPSGKLRLYCKGADTVIYDRLAETSKYKEITLKHL EQFATEGLRTLCFAVAEISESDFQEWRAVYQRASTSVQNRLLKLEESYELIEKNLQLL GATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKLLRKNMGMIVIN EGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQYFLDLALSCKA VICCRVSPLQKSEVVEMVKKQVKAITLAIGDGANDVSMIQTAHVGVGISGNEGLQAAN SSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFVNGFSGQI LFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPELYKTSQNALDFNTKVFWVH CLNGLFHSVILFWFPLKALQYGTVFGNGKTSDYLLLGNFVYTFVVITVCLKAGLETSY WTWFSHIAIWGSITLWVVFFGIYSSLWPTVPMAPDMSGEAAMLFSSGVFWTGLLFIPV ASLLLDVAYKVIKRTAFKTLVDEVQELEAKSQDPGAVVLGKSLTERAQLLKNVFKKNH VNLYRSESLQQNLLHGYAFSQDENGIVSQSEVIRAYDTTKQRPDEW" assembly_gap 2452158..2452190 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2489627..2489660 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2525554..2526665 /estimated_length=1112 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2644652..2645249 /estimated_length=598 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2660660..2660784 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2706575..2706849 /estimated_length=275 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2720304..2721695 /estimated_length=1392 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2733285..2733338 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2743083..2747414 /estimated_length=4332 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2759008..2760353 /estimated_length=1346 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2767060..2767128 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2813610..>2927342 /locus_tag="PAL_GLEAN10016059" mRNA join(<2813610..2813993,2864415..2864657,2927163..>2927342) /locus_tag="PAL_GLEAN10016059" /product="Glutaredoxin domain-containing cysteine-rich protein 1" CDS join(2813610..2813993,2864415..2864657,2927163..2927342) /locus_tag="PAL_GLEAN10016059" /note="GO_function: GO:0009055 - electron carrier activity [Evidence IEA]; GO_function: GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO_process: GO:0045454 - cell redox homeostasis [Evidence IEA]" /codon_start=1 /product="Glutaredoxin domain-containing cysteine-rich protein 1" /protein_id="ELK03633.1" /db_xref="InterPro:IPR002109" /db_xref="InterPro:IPR012336" /db_xref="UniProtKB/Swiss-Prot:A8MXD5" /translation="MLKREMKPESDRPRKVRFRIASSHSGRVLKEVYEDGQPSGSLDS ECASICGIDGLSESDGQQNGHIGSESDEHENDQDNLLMLARAASEKCFGTRRVNILSK NGTVRGVKYKVSAGQALFNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVR KIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAPSLPVVFIDGHYLGRVQHPHECP SCGGFGFLPCSVCHGSKMSVFRNCFTDSFKALKCTACNENGLQRCKSCAG" assembly_gap 2855757..2855770 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2856980..2857014 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2873009..2873074 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2884546..2884594 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2943231..2943257 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2992072..2992960 /estimated_length=889 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2995649..2995660 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2999451..3002019 /estimated_length=2569 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3016439..3019377 /estimated_length=2939 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3039103..3041473 /estimated_length=2371 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3081872..3081909 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3084571..3084627 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3091650..3091768 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3135981..3136015 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3156777..3156848 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3160586..3160614 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3163033..3163062 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3227050..3227228 /estimated_length=179 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3229999..3230167 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3230844..3234012 /estimated_length=3169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3243255..3244820 /estimated_length=1566 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3256000..3256051 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3298307..3298316 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3310062..3310104 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3318587..3318610 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3394971..3395041 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3399040..3399049 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3411812..3412140 /estimated_length=329 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3416180..3416229 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3432089..3432106 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3435466..3436073 /estimated_length=608 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3447391..3447618 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3458589..3459792 /estimated_length=1204 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3482518..3482549 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3484688..3487558 /estimated_length=2871 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3538017..3538030 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3579209..3579257 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3622555..3622612 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3654648..3654677 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3659963..3659980 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3693970..3694044 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3705403..3705549 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3737895..>3740716) /locus_tag="PAL_GLEAN10016060" mRNA complement(join(<3737895..3738355,3740680..>3740716)) /locus_tag="PAL_GLEAN10016060" /product="BTB/POZ domain-containing protein KCTD8" CDS complement(join(3737895..3738355,3740680..3740716)) /locus_tag="PAL_GLEAN10016060" /codon_start=1 /product="BTB/POZ domain-containing protein KCTD8" /protein_id="ELK03634.1" /db_xref="UniProtKB/Swiss-Prot:Q6ZWB6" /translation="MQPDPRNPGVGLGPPHKMASPKQEHEDRKHDKVTDKGSESGTSC NELSTSSCDSHSEASTPQDNPPNAQQATAHQPNTLTLDRPSKKAPVQWMPPPDKRRNS ELFQTLISKSRETNLSKKKVCEKLSVEEEMKKCIQDFKKIHIPDYFPERKRQWQSELL QKYGL" assembly_gap 3821179..3821200 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3828027..3828059 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3844531..3844590 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3887732..3887770 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3898942..3898991 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3907826..3908121 /estimated_length=296 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3928573..3928623 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3942793..3943825 /estimated_length=1033 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3945562..3945583 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3955313..3955472 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3958964..3959001 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3963006..3963059 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3965684..>3967255) /locus_tag="PAL_GLEAN10016061" mRNA complement(<3965684..>3967255) /locus_tag="PAL_GLEAN10016061" /product="BTB/POZ domain-containing protein KCTD8" CDS complement(3965684..3967255) /locus_tag="PAL_GLEAN10016061" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]" /codon_start=1 /product="BTB/POZ domain-containing protein KCTD8" /protein_id="ELK03635.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/Swiss-Prot:Q50H33" /translation="MTAVARVPVPGLTSVPPSRLRGVVSATDRARDSRRARKLLGRRV FFALTPPPALSTECRAAALRASCKSLSHFPAISPKEQPLLLGPPPPLPLPLPLPLSSS PALLFSDGARAPPQPLLPRALNRADPAGERYLPARGRTRRTPRLGAAEGARNVKVPLS RVTWSAVGWNMALKDTSSVGSTILPISEMVSSSSSPGASVAAPGPCAPSPFPEVVELN VGGQVYVTKHSTLLSVPDSILANMFSPSSPRGGARRRGELPRDSRARFFIDRDGFLFR YVLDYLRDKQLALPEHFPEKERLLREAEYFQLTDLVKLLSPKVTKQNSLNDEGCQSDL EDNVSQGSSDALLMRGAAAAAPSGPGAHGGGGARDKSSGFLTLGYRGSYTTVRDNQAD AKFRRVARIMVCGRIALAKEVFGDTLNESRDPDRPPEKYTSRFYLKFTYLEQAFDRLS ESGFHMVACNSSGTAAFVNQYRDDKIWSSYTEYIFFRKLVVSAFPGSPRPLADLWWMK SVCKPDRRVSRAGTS" assembly_gap 3970134..3970713 /estimated_length=580 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3978021..3978044 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3980635..3980658 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3985418..3985434 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3994138..3994160 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4020238..4021539 /estimated_length=1302 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4028229..4028264 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4041339..4041917 /estimated_length=579 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4062357..4062393 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4079064..4079224 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4117243..>4143875) /locus_tag="PAL_GLEAN10016062" mRNA complement(join(<4117243..4117405,4120057..4120238, 4129874..4130019,4136306..4136367,4143760..>4143875)) /locus_tag="PAL_GLEAN10016062" /product="Protein YIPF7" CDS complement(join(4117243..4117405,4120057..4120238, 4129874..4130019,4136306..4136367,4143760..4143875)) /locus_tag="PAL_GLEAN10016062" /note="GO_component: GO:0016020 - membrane [Evidence IEA]" /codon_start=1 /product="Protein YIPF7" /protein_id="ELK03636.1" /db_xref="InterPro:IPR006977" /db_xref="UniProtKB/Swiss-Prot:A5D7K7" /translation="MSNLGQFDSDFYQSNYTIDNQEQSRNDSNAYENLYGSRKQQASE QPQPAFVPPEMLMPSELGINFDHIWQKTLTVLNPLKAADGSIMNETDLAGPILFCIAL GATLLLAGKVQFGYVYGMSAIGCLGICALLNLMSSSGVSYGCVASVLGYCLLPMVILS SCAIFFSLQGTIGTVSALIIIGWCSLSASKIFISALDMEGQQLLIAYPCALLYGLFAL LTVF" assembly_gap 4130381..4130432 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4158153..>4181320 /locus_tag="PAL_GLEAN10016063" mRNA join(<4158153..4158317,4159941..4160052,4160198..4160346, 4160622..4160702,4161602..4161679,4162544..4162627, 4166590..4166654,4167168..4167371,4168723..4168862, 4170018..4170141,4170504..4170636,4171406..4171549, 4172464..4172597,4175596..4175697,4176526..4176645, 4180380..4180416,4181174..>4181320) /locus_tag="PAL_GLEAN10016063" /product="GTP-binding protein GUF1 like protein" CDS join(4158153..4158317,4159941..4160052,4160198..4160346, 4160622..4160702,4161602..4161679,4162544..4162627, 4166590..4166654,4167168..4167371,4168723..4168862, 4170018..4170141,4170504..4170636,4171406..4171549, 4172464..4172597,4175596..4175697,4176526..4176645, 4180380..4180416,4181174..4181320) /locus_tag="PAL_GLEAN10016063" /note="GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]" /codon_start=1 /product="GTP-binding protein GUF1 like protein" /protein_id="ELK03637.1" /db_xref="InterPro:IPR000640" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR009000" /db_xref="InterPro:IPR009022" /db_xref="InterPro:IPR013842" /db_xref="UniProtKB/Swiss-Prot:Q8N442" /translation="MQFLVGPGWWRGRAITACVSGAACRMLPLPLPVLSRGAAARSRA LDSLHSSAERKEKIDMSRFPVENIRNFSIIAHVDHGKSTLADRLLELTGTIDKTNNNK QVLDKLQVERERGITVKAQTASLFYNCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQG VLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINKIDLKNADPKRVEKQIEKVFDIPS DECIKISAKLGTNVESVLQAVIERIPPPKVHRKNPLRALVFDSTFDQYRGVIANVALF DGVVSKGDKIVSAHTRKTYEVNEVGVLNPNELPTHKLYAGQVGYLIAGMKDVTEAQVG DTLYLHKQPVEPLPGFKSAKPMVFAGMYPVDQSEYNNLKSAVEKLTLNDSSVTVHRDS SLALGAGWRLGFLGLLHMEVFNQRLEQEYNASVILTTPTVPYKAVLSSAKLIKEYREK EITIINPAQFPDKSKVTEYLEPVVLGTVITPDEYTGKIMMLCQARRAIQKNMVFIDQN RVMLKYLFPLNEIVVDFYDSLKSLSSGYASFDYEDAGYQTAELVKMDILLNGNIVEEL VTVVHKDKAHSVGKAICERLKDSLPRQLFEIAIQAAIGSKIIARETVKAYRKNVLAKC YGGDITRKMKLLKRQAEGKKKMRKIGNVEVPKDAFIKVLKTQSDNGKI" assembly_gap 4174285..4174312 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4192849..>4209220) /locus_tag="PAL_GLEAN10016064" mRNA complement(join(<4192849..4193034,4197576..4197760, 4203215..4203397,4205319..4205420,4209097..>4209220)) /locus_tag="PAL_GLEAN10016064" /product="Glucosamine-6-phosphate isomerase 2" CDS complement(join(4192849..4193034,4197576..4197760, 4203215..4203397,4205319..4205420,4209097..4209220)) /locus_tag="PAL_GLEAN10016064" /note="GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="Glucosamine-6-phosphate isomerase 2" /protein_id="ELK03638.1" /db_xref="InterPro:IPR006148" /db_xref="UniProtKB/Swiss-Prot:Q17QL1" /translation="MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGST PLGCYKKLIEYHKNGDLSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPN NAHILDGNAADLQAECDAFEKKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRLK TLAMDTILANAKYFDGDLSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEE GVNHMWTVSAFQQHPQTIFVCDEDATLELRVKTVKYFKGEH" gene <4211320..>4211655 /locus_tag="PAL_GLEAN10016065" mRNA <4211320..>4211655 /locus_tag="PAL_GLEAN10016065" /product="hypothetical protein" CDS 4211320..4211655 /locus_tag="PAL_GLEAN10016065" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03639.1" /translation="MRGEKQQKRLWSPPRRRGLKTLSTEQLLGPVTPKTVSKANEDDL QFFNKCQEKAAREEELGKPLLGGRVPQRTKRAKFDAPRLEAPGTPMRSGRLHLGTKPI RGDSDYPGP" assembly_gap 4211716..4211739 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4216786..4216889 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4219859..4222211 /estimated_length=2353 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4226986..4227030 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4280519..4281438 /estimated_length=920 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4350576..4350849 /estimated_length=274 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4369472..4369560 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4375110..4375144 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4378217..4379659 /estimated_length=1443 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4405364..4405378 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4408829..4408875 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4417591..4417630 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4426188..4426220 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4487962..4488949 /estimated_length=988 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4502340..4502571 /estimated_length=232 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4531793..4531807 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4555817..4555855 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4562700..4563262 /estimated_length=563 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4568233..4568276 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4631093..4631293 /estimated_length=201 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4652262..4653775 /estimated_length=1514 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4690165..4690268 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4702430..4702460 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4868291..4868301 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4874722..4874770 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4974142..4974377 /estimated_length=236 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5005040..5005403 /estimated_length=364 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5046302..5046410 /estimated_length=109 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5096749..>5148690) /locus_tag="PAL_GLEAN10016070" mRNA complement(join(<5096749..5097018,5105805..5106016, 5109029..5109181,5109297..5109434,5112655..5112737, 5148605..>5148690)) /locus_tag="PAL_GLEAN10016070" /product="Gamma-aminobutyric acid receptor subunit gamma-1" CDS complement(join(5096749..5097018,5105805..5106016, 5109029..5109181,5109297..5109434,5112655..5112737, 5148605..5148690)) /locus_tag="PAL_GLEAN10016070" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006821 - chloride transport [Evidence IEA]; GO_process: GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IEA]" /codon_start=1 /product="Gamma-aminobutyric acid receptor subunit gamma-1" /protein_id="ELK03640.1" /db_xref="InterPro:IPR005437" /db_xref="InterPro:IPR006028" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:P23574" /translation="MQVDEGNKKEGREGRRGMEGRIVQLREAQLTINAECYLQLHNFP MDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFVGLRNSTEISHTIS GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLT MTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGALHYFTSNKKGKTTRDRK LKNKASISTGLHSGSTLIPMNSISLPQGEDDYGYQCLEGKDCASFFCCFEDCRTGSWR EGRIHIRIAKIDSYSRIFFPTAFALFNLVYWVGYLYL" assembly_gap 5141824..5141913 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5160629..5160664 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5208542..>5328427) /locus_tag="PAL_GLEAN10016071" mRNA complement(join(<5208542..5208838,5220508..5220710, 5249526..5249678,5250846..5250989,5255423..5255505, 5256887..5257107,5276252..5276319,5325510..5325625, 5326173..5326264,5328101..5328188,5328288..>5328427)) /locus_tag="PAL_GLEAN10016071" /product="Gamma-aminobutyric acid receptor subunit alpha-2" CDS complement(join(5208542..5208838,5220508..5220710, 5249526..5249678,5250846..5250989,5255423..5255505, 5256887..5257107,5276252..5276319,5325510..5325625, 5326173..5326264,5328101..5328188,5328288..5328427)) /locus_tag="PAL_GLEAN10016071" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006821 - chloride transport [Evidence IEA]; GO_process: GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IEA]" /codon_start=1 /product="Gamma-aminobutyric acid receptor subunit alpha-2" /protein_id="ELK03641.1" /db_xref="InterPro:IPR001390" /db_xref="InterPro:IPR005432" /db_xref="InterPro:IPR006028" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:P47869" /translation="MKEEEEEKEEEEEEKKKKRRRRKEGEERKKNPLSSHHAYAHSTG IISFTKSGDEDEIEHFRYAVAASCFLDVGPSQSPPPPPSYSGAWNTASVVLLMSILHL AIGWRLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSF GPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSV AHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSE VTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIG YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAY ATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEKASVMIQNNAY AVAVANYAPNLSKDPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVF PVLFGTFNLVYWATYLNREPVLGVSP" assembly_gap 5329615..5329749 /estimated_length=135 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5330779..5330827 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5336951..5337264 /estimated_length=314 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5375613..5375905 /estimated_length=293 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5376863..5377026 /estimated_length=164 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5407287..5407318 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5440883..5440916 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5442005..5442173 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5468993..5469021 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5480455..5484210 /estimated_length=3756 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5487713..5488132 /estimated_length=420 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5495215..5495873 /estimated_length=659 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5499255..5499304 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5530164..5530275 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5540720..5542766 /estimated_length=2047 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5544245..5544617 /estimated_length=373 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5555823..5555838 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5557920..5557942 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5586692..5586701 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5602535..>5602780) /locus_tag="PAL_GLEAN10016072" mRNA complement(<5602535..>5602780) /locus_tag="PAL_GLEAN10016072" /product="Cytochrome c oxidase subunit 7B2, mitochondrial" CDS complement(5602535..5602780) /locus_tag="PAL_GLEAN10016072" /note="GO_component: GO:0005746 - mitochondrial respiratory chain [Evidence IEA]; GO_function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]" /codon_start=1 /product="Cytochrome c oxidase subunit 7B2, mitochondrial" /protein_id="ELK03642.1" /db_xref="InterPro:IPR008433" /db_xref="InterPro:IPR023272" /db_xref="UniProtKB/Swiss-Prot:Q4R648" /translation="MMFPLARNALRSFKIRSIQQIRARQSHKKHSPDFHDKYGNALLA SGITFCVVAWIFAATQIGIKWNLSPVGRVTPKEWNDD" assembly_gap 5614523..5614557 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5648443..5657661 /estimated_length=9219 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5702706..5702720 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5705286..5705313 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5732126..5732237 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5749358..>5812795) /locus_tag="PAL_GLEAN10016073" mRNA complement(join(<5749358..5749888,5787554..5787813, 5795518..5795661,5798768..5798850,5798977..5799197, 5800205..5800272,5811722..5811840,5812749..>5812795)) /locus_tag="PAL_GLEAN10016073" /product="Gamma-aminobutyric acid receptor subunit alpha-4" CDS complement(join(5749358..5749888,5787554..5787813, 5795518..5795661,5798768..5798850,5798977..5799197, 5800205..5800272,5811722..5811840,5812749..5812795)) /locus_tag="PAL_GLEAN10016073" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006821 - chloride transport [Evidence IEA]; GO_process: GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IEA]" /codon_start=1 /product="Gamma-aminobutyric acid receptor subunit alpha-4" /protein_id="ELK03643.1" /db_xref="InterPro:IPR001390" /db_xref="InterPro:IPR005434" /db_xref="InterPro:IPR006028" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:P20237" /translation="MLWKGRTWGGDAADASLNESPGQNQKEEKLCPENFTRILDSLLD GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIE ILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECP MRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTV SSETIKSITGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAV NYFTNIQMQKAKRKTSKAVQEIPAAPMLREKHHEAPLQNTNANLNMRKRTNALVHSES DVGIRTEVGNHLSRSSMAVQESSEATSQSYLASSPNPFSHANAAETISAARALPSASS TPSRTGYVPRQASVGSASTHHMFGSRLERIKTTVNTIGASGKLSAITSPSSPPPSGSG TSKIDKYARILFPVTFGAFNMVYWVVYLSKDTMEKSESLM" assembly_gap 5776475..5778936 /estimated_length=2462 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5780134..5780175 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5801381..5801415 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5815339..5815348 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5856162..5856171 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5901038..5901130 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5909067..5911569 /estimated_length=2503 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5914729..5914779 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5919025..5919061 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5924917..5924937 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5937743..5937773 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5944985..5945002 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5952694..5953953 /estimated_length=1260 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5960323..5960491 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5971385..5971411 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5982183..5982222 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5983838..5983940 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5994693..5994832 /estimated_length=140 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6034004..6034260 /estimated_length=257 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6109487..6109645 /estimated_length=159 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6174279..6174297 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6187674..>6213792 /locus_tag="PAL_GLEAN10016074" mRNA join(<6187674..6187752,6189237..6189374,6189479..6189631, 6192562..6192806,6213448..>6213792) /locus_tag="PAL_GLEAN10016074" /product="Gamma-aminobutyric acid receptor subunit beta-1" CDS join(6187674..6187752,6189237..6189374,6189479..6189631, 6192562..6192806,6213448..6213792) /locus_tag="PAL_GLEAN10016074" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]" /codon_start=1 /product="Gamma-aminobutyric acid receptor subunit beta-1" /protein_id="ELK03644.1" /db_xref="InterPro:IPR002289" /db_xref="InterPro:IPR006028" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:P08220" /translation="MSNSQKDLKDRSYKPIPKIGINLQYANGYTTDDIEFYWNGGEGA VTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLI TILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV FVFLALLEYAFVNYIFFGKGPQKKGAGKQNQNANEKNKLEMNKVQVDAHGNILLSTLE IRNETSGSEVLTGVSDRNATMYSYDSASIQYRKPMSSREAYGRALDRHGAHSKGRIRR RASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYVH" assembly_gap 6193058..6193317 /estimated_length=260 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6203641..6204938 /estimated_length=1298 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6221302..6221367 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6232476..>6243280) /locus_tag="PAL_GLEAN10016075" mRNA complement(join(<6232476..6232496,6233571..6233726, 6236194..6236346,6239984..6240139,6243215..>6243280)) /locus_tag="PAL_GLEAN10016075" /product="COMM domain-containing protein 8" CDS complement(join(6232476..6232496,6233571..6233726, 6236194..6236346,6239984..6240139,6243215..6243280)) /locus_tag="PAL_GLEAN10016075" /codon_start=1 /product="COMM domain-containing protein 8" /protein_id="ELK03645.1" /db_xref="InterPro:IPR009886" /db_xref="InterPro:IPR017920" /db_xref="UniProtKB/Swiss-Prot:Q9NX08" /translation="MEPEEGTPLWRLQKLPAELGLQLLHKIIDGICGRTYPLYQDYQS VWDSTEWVHVLEDITKFFKAVVGKSLSDEEISQQLNQLNSFHQEAIIKCLRSRKDEIK QALLEEIVDISSAQLQDFDWQLKLALSSDKIATLQMPLLNLHLDVKENGEIKPYSVEM SKEELQNLINSLEAANKVVLQLK" gene complement(<6255610..>6256026) /locus_tag="PAL_GLEAN10016076" mRNA complement(<6255610..>6256026) /locus_tag="PAL_GLEAN10016076" /product="hypothetical protein" CDS complement(6255610..6256026) /locus_tag="PAL_GLEAN10016076" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03646.1" /translation="MTVPSPKMQENHAQIRRPETGYASTPIIRLVVGRGGTLLRQHPN SDGRAGAEPGWSRRPLLAYFLLLLLLRGLSSPRANSQSPPPRLPRRQGAEPGRPDFWA PAVGQSCLWAQRRASSGSDLFSSTAYFHITVQVACI" assembly_gap 6271175..6272101 /estimated_length=927 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6287428..>6360503 /locus_tag="PAL_GLEAN10016077" mRNA join(<6287428..6287672,6289880..6290074,6300976..6301180, 6303190..6303275,6310331..6310437,6310728..6310859, 6311252..6311379,6311500..6311752,6320985..6321223, 6327720..6327908,6329675..6330284,6330917..6331023, 6331796..6331922,6333514..6333698,6337157..6337463, 6340180..6340256,6341238..6341363,6344019..6344219, 6348862..6348942,6350116..6350220,6354104..6354291, 6360146..>6360503) /locus_tag="PAL_GLEAN10016077" /product="Putative phospholipid-transporting ATPase VD" CDS join(6287428..6287672,6289880..6290074,6300976..6301180, 6303190..6303275,6310331..6310437,6310728..6310859, 6311252..6311379,6311500..6311752,6320985..6321223, 6327720..6327908,6329675..6330284,6330917..6331023, 6331796..6331922,6333514..6333698,6337157..6337463, 6340180..6340256,6341238..6341363,6344019..6344219, 6348862..6348942,6350116..6350220,6354104..6354291, 6360146..6360503) /locus_tag="PAL_GLEAN10016077" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO_function: GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO_process: GO:0006754 - ATP biosynthetic process [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Putative phospholipid-transporting ATPase VD" /protein_id="ELK03647.1" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023306" /db_xref="UniProtKB/Swiss-Prot:Q9P241" /translation="MGSTNRDDNERPYNYSSLLACGCKSSQTPKLAGKHRVVVPHLQH FKEDYEKFSGTYVNNRIRTTKYTLLNFVPRNLFEQFHRAANLYFLFLVVLNWVPLVEA FQKEITMLPLVVVLTIIAIKDGLEDYRKYKIDKQINNLVTKVYSRKEKKYVEQRWKDV TVGDFIRLSCNEIIPADMVLLFSTDPDGICHIETSGLDGESNLKQRQVVRGYAEQDSE VDPEKFSSRIECENPNNDLNRFRGFLEHSNKDCVGLSKENLLLRGCTIRNTEAVVGIV VYAGHETKAMLNNSGPRYKRSKLERRANTDVLWCVLLLFIMCLTGALGHGIWLSRYEN VLFFNIPEPDGHVISPLLAGFYMFWTMIILLQVLIPISLYVSIEIVKLGQIYFIQSDM DFYNEKMDSTVQCRALNIAEDLGQIQYLFSDKTGTLTENKMVFRRCSVAGFDYCHEEN AKRLESYQEAVVEDEDLADTPSGSLSNMAKLRAPSCRTVHNGPLESKPSNHLAGSCSA LGSGEGASEVPHSRQAAFSSPIETDVVPDTRLLDKFNQITPQFFTSLDETIPDPPLET LYIIDFFIALAICNTVVVSAPNQPRQKIRLSSLSGMPTKSLEEIKNLFQRLSVRRSSS PSLAGGKEPSSGVPNTFVSRLSLFSRIKLASPVEEEVSQTGESQQGSGNSACQTETEK QNGDAGVTNGKADSLPGQPLATNLCYEAESPDEAALVYAARAYQCTLQSRTPEQVVVD FAALGPLTFQLLHILPFDSIRKRMSVVVRHPLSNQVVVYTKGADSVIMELLSMVSPDG ASQEKQQMIIREKTQEHLDDYAKQGLRTLCIAKKVMSDTEYAEWLRNHFLAETSIDNR EELLLESAMRLENKLTLLGATGIEDRLQEGVPESIEALHKAGIKIWMLTGDKQETAVN IAYACKLLEPDDKLFILNTQSKDACEMLMGTILKELKKNPPSTEQASLSEDLYQPPAS QDSGLRAGLIITGKTLEFTLQDSLQRQFLELTACCQAVVCCRATPLQKSEVVKLVRNH LRVMTLAIGDGANDVSMIQVADIGIGISGQEGMQAVMASDFAVSQFKHLSKLLLVHGH WCYTRLSNMILYFFYKNVAYVNLLFWYQFFCGFSGTSMTDYWILIFFNLLFTSAPPVI YGVLEKDVSAETLVQLPELYKSGQKSEAYLPLTFWITLLDAFYQSLVCFFVPYLTYQG SDVDIFTFGNPLNTAALFIILLHLVIESKSLTWIHMLVIIGSILSYFFFALAFGAMCV TCNPPSNPYWIMQECMLDPVFYFVCVLTTYVALLPRFIYRVLQGSLFPSPILRAKHFD RLTPEERIEALKKWRGAGKMGQVTSKYAEHSTAKSERKPMSGPSDVFAMMSATSCAVE QGNVTICETVLDSDYSETKTSGMTGPSGLKSRISSLDL" assembly_gap 6307235..6307247 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6328534..6328577 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6334668..6334867 /estimated_length=200 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6368437..>6568976) /locus_tag="PAL_GLEAN10016078" mRNA complement(join(<6368437..6368613,6368737..6368870, 6370992..6371263,6384663..6384779,6397446..6397575, 6398606..6398716,6400539..6400652,6407759..6407866, 6408643..6408788,6412197..6412428,6422641..6422757, 6424532..6424642,6425826..6425933,6433786..6433899, 6474863..6475044,6495295..6495502,6514509..6514709, 6528827..6528971,6568710..>6568976)) /locus_tag="PAL_GLEAN10016078" /product="Atrial natriuretic peptide-converting enzyme" CDS complement(join(6368437..6368613,6368737..6368870, 6370992..6371263,6384663..6384779,6397446..6397575, 6398606..6398716,6400539..6400652,6407759..6407866, 6408643..6408788,6412197..6412428,6422641..6422757, 6424532..6424642,6425826..6425933,6433786..6433899, 6474863..6475044,6495295..6495502,6514509..6514709, 6528827..6528971,6568710..6568976)) /locus_tag="PAL_GLEAN10016078" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Atrial natriuretic peptide-converting enzyme" /protein_id="ELK03648.1" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR009003" /db_xref="InterPro:IPR020067" /db_xref="UniProtKB/Swiss-Prot:Q9Y5Q5" /translation="MRRVFFNVRVRSVQGPRSPWQGRCRICRVPSPPGALHASGGLCG TRAPGEAAEGAVGSSPSGTLGFLSAPASQTPGIWKDCAAALPAPDVLVSDEDNLNDGC SQKLTTTNILRFLLLVLIPCICALIVLLVILLSFVGTLKKAHFKSNGSEPMATDGKNR TPDIILRNMIYNESEVTSATHPDQYMSAWTKNISLSRDQNHKNTSTCMNITHSQCQML PYHTTLTSLFPIVKKMDMEKFLKFFTYLHRLSCYQHIMLFGCSLAFPECVSDGDDSHG LLPCRSFCEAAREGCESILGMVNTSWPDFLKCSQFRSQTEISNVSRICFSPEQEKGKQ SLCGGGESFLCGSGTCIPRTLLCNGYNDCDDWSDEAHCNCSENLFHCHTGKCLNYSLV CDGYDDCGDLSDEQNCDCNLTKEHRCGDGRCIMMEWVCDGDHDCVDKSDEVNCSCHSQ GLMECGNGQCIPSSFQCDGDEDCKDRSDEEGCSGSQCEPITLELCMNLPYNHTYYPNY LGHRTQKEASISWESSLFPALVQTNCYKYLMFFACTILVPKCDVNTSQRIPPCRALCE QSKERCESVLGIVGLQWPEGTDCNQFPEENSDNQTCLMPNEDVEECSPSHFKCGSGRC VLASRRCNGEPDCDDDSDEENCGCKERNLWECPTDKQCLQHTVVCDGFPDCSDHMDEK NCSFCQDDELECANHECVSRDQWCDGEANCLDSSDEWDCVSLSKNVDSFSFLTVYRSA TEHLVCGDGWQETLSQLACKQMGLGEPSVTELIQEQKQDQQWLILHSNWKSLNGTTLH ELLVKGRETAADWKVVFGINNLDHPSSYIQTRLVKTIILHPRYSRAVVDYDISIVELG EDISETSYVRPVCLPSMLQSLEPDTYCYITGWGHMGHKMPFKLQEGEVRVISLEQCQS YFDMKTITTRMICAGYESGTVDSCMIFIRSVASIIRSPSDLSYYLHALCSGCLRLSHP LHEERHLDQQQEENTIVLVYVTGPF" assembly_gap 6372161..6372300 /estimated_length=140 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6414115..6415286 /estimated_length=1172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6438023..6438074 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6459084..6459211 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6490363..6493926 /estimated_length=3564 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6497098..6497121 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6502859..6502915 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6519007..6519160 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6527204..6527255 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6531642..6531659 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6542731..6542875 /estimated_length=145 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6567640..6567720 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6576761..>6626995) /locus_tag="PAL_GLEAN10016079" mRNA complement(join(<6576761..6576931,6579102..6579155, 6579953..6580039,6583082..6583186,6586818..6586887, 6589803..6589969,6596636..6596776,6597207..6597228, 6600156..6600247,6600979..6601138,6601367..6601487, 6606375..6606465,6609841..6609963,6610684..6610808, 6613196..6613310,6613977..6614077,6614164..6614325, 6614548..6614726,6616071..6616201,6618131..6618240, 6621638..6621814,6626812..>6626995)) /locus_tag="PAL_GLEAN10016079" /product="NF-X1-type zinc finger protein NFXL1" CDS complement(join(6576761..6576931,6579102..6579155, 6579953..6580039,6583082..6583186,6586818..6586887, 6589803..6589969,6596636..6596776,6597207..6597228, 6600156..6600247,6600979..6601138,6601367..6601487, 6606375..6606465,6609841..6609963,6610684..6610808, 6613196..6613310,6613977..6614077,6614164..6614325, 6614548..6614726,6616071..6616201,6618131..6618240, 6621638..6621814,6626812..6626995)) /locus_tag="PAL_GLEAN10016079" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="NF-X1-type zinc finger protein NFXL1" /protein_id="ELK03649.1" /db_xref="InterPro:IPR000967" /db_xref="InterPro:IPR001841" /db_xref="UniProtKB/Swiss-Prot:Q6ZNB6" /translation="MEASWRQVAGGRGRARGRPTAAPSSGNGIHLRGAGGGREKGSVG AGGPGCSPGGAATAAAAAELMSQRKFEEIKKANQAAAKKLVEEHFSSSSEEEGDEDFE GKRGEIVANTFITYTTQTDGDTCELERTKQYLNEAFQAGAMTCLICIASVKRNQAVWS CSGCFCIFHMPCIQKWAKDSQFLVSSLTDDDFGKKDYPWPCPKCRFEYKRSDTPNRYY CYCGKVEDPPLDPWLVPHSCGQVCEREFKPPCGHKCLLLCHPGPCPPCPKMITTTCYC KKAKPIPRRCSAKKWSCQLPCGRKLLCGQHKCENPCHAGSCPPCPRVSRQKCVCGKKV AERSCASPLWHCDRVCGKTLPCGNHTCEQVCHVGACGECPRSGKRSCPCQKSKFSLPC TEDVPTCGDSCDKLLECGIHRCSQRCHRGPCETCRQEVEKHCRCGKHTKRMPCHKPYL CETKCVKMRDCQKHQCRRKCCPGNCPPCDQNCGRTLGCRNHKCPSVCHRGSCYPCPET VDVKCNCGSTKVTVPCGRERTTRPPKCKEQCSRPPTCHHTSQEKHRCHFGSCPPCHQP CQKVLEKCGHLCPAPCHDQALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPM QCLGKHETSLLPCHAAGPYSCKRLCGRTLDCQNHTCMKECHKVTEIDTSTGKNKAGPE CLQCEEGCSKSRPAGCPHPCVLPCHPGECPPCVQMLRIKCHCKITSLYVECRKITTAD VNEKNLLSCCKNQCPKELPCGHRCKEMCHPGDCPFNCNQKVKLRCPCKRIKKELQCNK VRENQISIECDTTCKEMKRKASAIKEAEAKAALEEEKRRQQAELEAFENRLKGRRKKN RKXXXXXXXTLWQKYKYYLLPTCAVAVLVFAWYIAHDVD" assembly_gap 6576855..6576872 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6629397..6629440 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6641631..6641671 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6642649..>6651755) /locus_tag="PAL_GLEAN10016080" mRNA complement(join(<6642649..6644063,6645328..6645434, 6647887..6647997,6648074..6648115,6649818..6649880, 6650792..6650908,6651649..>6651755)) /locus_tag="PAL_GLEAN10016080" /product="cGMP-gated cation channel alpha-1" CDS complement(join(6642649..6644063,6645328..6645434, 6647887..6647997,6648074..6648115,6649818..6649880, 6650792..6650908,6651649..6651755)) /locus_tag="PAL_GLEAN10016080" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="cGMP-gated cation channel alpha-1" /protein_id="ELK03650.1" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR018490" /db_xref="UniProtKB/Swiss-Prot:Q28279" /translation="MKKNIINTQHSFVNIPNVIVPDIEKEIRRMENGACSSFSDDDDS ASVFEDSGSENPCARDSFRNYSHRKGRPSQREQYLPGVIALFNVNNSSNKEQEPKEKK KKKKEKKSKSDDKNENKKDPEKKKTKEKDKEKKKKEEKGKDKKEEACFDELQSDYLTY WLIFDYLSDVVYLLDMFVRTRTGYLEQGLLVREKLKLIEKYKSNVQFKLDVLSVVPTD LLFFKLGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNA CVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDS EYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMNFRNVSKDME KRVIKWFDYLWTNKKTVDEREVLKYLPDKLRAEIAISVHLDTLKKVRIFADCEAGLLV ELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEI SILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKGMLEEKGKQILMK DGLLDINIANAGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVE KFLKPLIETEFSTIEVSGVESGPTDSTQD" assembly_gap 6647323..6647373 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6669018..6669053 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6676680..6676691 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6692657..>6700729 /locus_tag="PAL_GLEAN10016081" mRNA join(<6692657..6692972,6695849..6695905,6697867..6697957, 6699425..6699585,6700104..>6700729) /locus_tag="PAL_GLEAN10016081" /product="Magnesium transporter NIPA3" CDS join(6692657..6692972,6695849..6695905,6697867..6697957, 6699425..6699585,6700104..6700729) /locus_tag="PAL_GLEAN10016081" /codon_start=1 /product="Magnesium transporter NIPA3" /protein_id="ELK03651.1" /db_xref="InterPro:IPR008521" /db_xref="UniProtKB/Swiss-Prot:Q8BMW7" /translation="MTASPLRLLTFASFFPGYKLSLVCPNSSQAWCEITNVSQLLASP VLYRDLNSSLTNLSISANVEDKYSLYVGLVLAVSSSIFIGSSFILKKKGLLQLANKGV TRAGQGGHSYLKEWLWWAGLLSMGAGEAANFAAYAFAPATLVTPLGALSVLISAILSS YFLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVASLHEMEMKLRDPGFISFAVIVT VITLVLILIVAPKKGKTNILVYISICSLIGAFSVSSVKGLGIAIKELLEWKPVYKHPL VFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMK AGDIIGTLSGFFTIINGIFLLHAFKNTNITWSDLTSTKKEVLSLNGSEDKYVLLENME YSASGYEDDVTLFSRTDDQSLNRH" assembly_gap 6708382..6720704 /estimated_length=12323 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6724016..>6759111) /locus_tag="PAL_GLEAN10016082" mRNA complement(join(<6724016..6724084,6726325..6726482, 6727997..6728115,6736269..6736440,6738461..6738535, 6743291..6743418,6754475..6754540,6756992..6757197, 6757899..6758001,6759041..>6759111)) /locus_tag="PAL_GLEAN10016082" /product="Tyrosine-protein kinase TXK" CDS complement(join(6724016..6724084,6726325..6726482, 6727997..6728115,6736269..6736440,6738461..6738535, 6743291..6743418,6754475..6754540,6756992..6757197, 6757899..6758001,6759041..6759111)) /locus_tag="PAL_GLEAN10016082" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Tyrosine-protein kinase TXK" /protein_id="ELK03652.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P42681" /translation="MLCFSDNTIQSIFCCCCCCSVQKRQVRTQINLSKDEELSEKYTQ HRRPWFSELPSKKQSNRGRVQPSKRKPLPPLPSSEVAEEKIRVKALYDFLPREPCDLA LKRAEEYLILEKYNTHWWKARDHLGNEGLIPSNYVTENKVTNLEIYESMEATIKHYQI KKNDSGQWYVAERHLFQSIPELIWYHQHNAAGLMARLRYPVGLMGSCLPATAGFSYEK WEIDPSELAFVKEIGSGQFGVVHLGKWRAHIQVAIKAINEGSMSEEDFIEEAKVMMYV LDDEYISSSGAKFPIKWSPPEVLHFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNL QVVEAISNGFRLYRPHLAPMSIYEVMYSCWHEKPKGRPAFAELLRVLTEIAETW" assembly_gap 6766943..6767065 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6777361..>6853860) /locus_tag="PAL_GLEAN10016083" mRNA complement(join(<6777361..6777444,6778665..6778822, 6778902..6779020,6780672..6780736,6787331..6787547, 6787670..6787841,6788610..6788684,6791041..6791174, 6792380..6792459,6794675..6794729,6799648..6799713, 6803167..6803342,6804272..6804312,6806416..6806497, 6811406..6811510,6853723..>6853860)) /locus_tag="PAL_GLEAN10016083" /product="Tyrosine-protein kinase Tec" CDS complement(join(6777361..6777444,6778665..6778822, 6778902..6779020,6780672..6780736,6787331..6787547, 6787670..6787841,6788610..6788684,6791041..6791174, 6792380..6792459,6794675..6794729,6799648..6799713, 6803167..6803342,6804272..6804312,6806416..6806497, 6811406..6811510,6853723..6853860)) /locus_tag="PAL_GLEAN10016083" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Tyrosine-protein kinase Tec" /protein_id="ELK03653.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P42680" /translation="MNLNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGR AEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKFPFQVVHDANTLYIFAPSAQSRDQW VKKLKEGIRKALPPAPETKKRRPPPPIPPEEEDNSEEIVVAMYDFQATEAHDLRLERG QEYIILEKNDVHWWRARDKYGSEGYIPSNYVTGKKSNNLDQYEWYCRNMNRSKAEQLL RSEDKEGGFMVRDSSQPGMYTVSLYTKFGGEGSSGFRHYHIKETTTSPKKYYLAEKHA FASIPEIIEYHKHNAAGLVTRLRYPVSAKGRNAPTTAGFSYEKWEINPSELTFMRELG SGLFGVVRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQ KPIYIVTEFMEKGCLLNFLRQKQGLFNRDLLLSMCQDVCEGMEYLERNSFIHRDLAAR NCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRFSSKSDVWSF GVLMWEVFTEGRMPFEKNTNYEVVTMVTRGHRLYRPKLASKYIYEVMLRCWQEKPEGR PSFEDLLRKIDELVECEETFGR" assembly_gap 6785225..6785242 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6800532..6800565 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6870712..6870775 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6900141..6901127 /estimated_length=987 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6944616..6944672 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6945077..>7010613 /locus_tag="PAL_GLEAN10016084" mRNA join(<6945077..6945465,6972325..6972473,6975998..6976162, 6977942..6978103,6981314..6981673,6982094..6982231, 6992109..6992186,7009609..7009927,7010547..>7010613) /locus_tag="PAL_GLEAN10016084" /product="SLAIN motif-containing protein 2" CDS join(6945077..6945465,6972325..6972473,6975998..6976162, 6977942..6978103,6981314..6981673,6982094..6982231, 6992109..6992186,7009609..7009927,7010547..7010613) /locus_tag="PAL_GLEAN10016084" /codon_start=1 /product="SLAIN motif-containing protein 2" /protein_id="ELK03654.1" /db_xref="UniProtKB/Swiss-Prot:Q3MHV6" /translation="MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSL GPGSPIRAGASTPSSGSASPRGFPLGLNAKSGSGAGSGPRRTSSEELRDATSLLAAGE GGLLDEVEPLRPEELERLSGCEEEEESWLYSSPKKKLTPMQKSISPLVWCRQVLDYPS PDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTNPYSPNTSSPYSSGFNSPSST PVRPPIVKQLILPGNSGNLKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDV TDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHH AVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLS LQGHPTDLQTSNVKNEEKLRRSLPNLSRTSTTQVDSVKSSRSDSNFQVPNGGIPRMQP QASATSQRLKNLPRTSLKAKQLLQTSSTKRVLSPGKFRSPAAPSPLALRQPVKAFSNH GSGSPGSQETTQLTQTTSSPGPPVVQNTVSANPPSNINSTTLTRPAGTTVMRSGLPRP SAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY" assembly_gap 6975046..6975063 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6992387..6992407 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7024040..7024061 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7035274..7035325 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7040872..>7045973 /locus_tag="PAL_GLEAN10016085" mRNA join(<7040872..7041488,7042257..7042467,7045461..>7045973) /locus_tag="PAL_GLEAN10016085" /product="Sodium/bile acid cotransporter 4" CDS join(7040872..7041488,7042257..7042467,7045461..7045973) /locus_tag="PAL_GLEAN10016085" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0008508 - bile acid:sodium symporter activity [Evidence IEA]; GO_process: GO:0006814 - sodium ion transport [Evidence IEA]" /codon_start=1 /product="Sodium/bile acid cotransporter 4" /protein_id="ELK03655.1" /db_xref="InterPro:IPR002657" /db_xref="UniProtKB/Swiss-Prot:Q3UEZ8" /translation="MDGVASAALPLDNATLPFATSALQPDSYQLLPNASSPSPGPDFP VAPASSARPSPGLGLGPGPSASFSPGPAPTPEPTTSSFASGWDSRGSSPFPRPWVPHE PPFWDTPLSHGLNVFVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFLP LLAFLLALIFSLDEVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLAL VLMPLCLWIYSRAWINTPLVQLLPLGAVTLTVCSTLIPIGLGVFIRYKYNRVADYIVK VSLWSLLVTLVVLFIMTGTMLGPELLASIPAAVYVVAIFMPLAGYASGYGLATLFHLP PNCRRTICLETGSQNVQLCTAILKLAFPPRFIGSMYMFPLLYALFQSAEAGIFVLIYK MYGSEVLHKQDPLDEDEDTDISYKKLKEEEMADTSYGTVKADNLIMMETTQTSL" assembly_gap 7047047..7047105 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7047328..7048194 /estimated_length=867 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7056161..>7192160) /locus_tag="PAL_GLEAN10016087" mRNA complement(join(<7056161..7056419,7056732..7056922, 7057794..7057904,7061287..7061355,7066593..7066691, 7067301..7067450,7068786..7068993,7071207..7071457, 7077178..7077342,7079735..7079938,7083281..7083457, 7083784..7083858,7083984..7084145,7086798..7086992, 7089307..7089447,7091142..7091312,7095299..7095396, 7095691..7096298,7097369..7097463,7098820..7099010, 7099843..7099964,7100946..7101150,7102507..7102692, 7103675..7103778,7104439..7104589,7105552..7105664, 7106203..7106287,7110702..7110870,7113677..7113817, 7114812..7115071,7117867..7118035,7119110..7119209, 7119527..7119681,7120556..7120666,7121224..7121384, 7123088..7123260,7125674..7125765,7128078..7128135, 7129624..7129748,7130546..7130741,7133015..7133283, 7135080..7135166,7135426..7135611,7136516..7136753, 7139633..7139740,7141901..7142033,7142479..7142650, 7145098..7145184,7146777..7146885,7147088..7147191, 7149625..7149669,7155583..7155684,7156709..7156807, 7163793..7163885,7164171..7164339,7166675..7166755, 7167129..7167208,7177106..7177202,7178124..7178263, 7181310..7181363,7190801..7191000,7192121..>7192160)) /locus_tag="PAL_GLEAN10016087" /product="Protein furry like protein-like protein" CDS complement(join(7056161..7056419,7056732..7056922, 7057794..7057904,7061287..7061355,7066593..7066691, 7067301..7067450,7068786..7068993,7071207..7071457, 7077178..7077342,7079735..7079938,7083281..7083457, 7083784..7083858,7083984..7084145,7086798..7086992, 7089307..7089447,7091142..7091312,7095299..7095396, 7095691..7096298,7097369..7097463,7098820..7099010, 7099843..7099964,7100946..7101150,7102507..7102692, 7103675..7103778,7104439..7104589,7105552..7105664, 7106203..7106287,7110702..7110870,7113677..7113817, 7114812..7115071,7117867..7118035,7119110..7119209, 7119527..7119681,7120556..7120666,7121224..7121384, 7123088..7123260,7125674..7125765,7128078..7128135, 7129624..7129748,7130546..7130741,7133015..7133283, 7135080..7135166,7135426..7135611,7136516..7136753, 7139633..7139740,7141901..7142033,7142479..7142650, 7145098..7145184,7146777..7146885,7147088..7147191, 7149625..7149669,7155583..7155684,7156709..7156807, 7163793..7163885,7164171..7164339,7166675..7166755, 7167129..7167208,7177106..7177202,7178124..7178263, 7181310..7181363,7190801..7191000,7192121..7192160)) /locus_tag="PAL_GLEAN10016087" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Protein furry like protein-like protein" /protein_id="ELK03656.1" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:O94915" /translation="MERSVLRSSLEEQPSAPVSKVNKYCASSNFHTTLGKKSIIMSSI TIDPDVKPGEYVIKSLFAEFTVQAEKKIEVVMAEPLEKPLSRSLQRGEDFQFDQLISS MSSVAEHCLPSLLRTLFDWYRRQNGTEDESYEYRPRSSTKSKGDEQQRERDYLLERRD LAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGTNTGNVHIIAD LYAEVIGVLTQSKFQAVRKKFMTELKELRQKEQSPHVVQSVISLIMGMKFFRVKMYPV EDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAAVKNEVNVPCLKNFVE MLYQTTFELSSRKKHSLALYPLITCLLCVSQKQFFLNNWHIFLQNCLSHLKMPSNNSI RKQIETLQNKDPKMSRVALESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSR SVVPRDTPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVGKSTKTFTINPERMNIGLRV FLVIADSLQQKDGEPPMPTTGVILPSGNTLRVKKIFLNKTLTDEEAKVIGMSIYYPQV RKALDSILRHLDKEVGRPMCMTSVQMSNKEPEDMITGERKPKIDLFRTCIAAIPRLIP DGMSRTDLIELLARLTIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVT DVHPTLLDNAVKMLVQLINQWKQATQMHNKNQDSQHGVANGASHPPPLERSPYSSVFH VVEGFALVILCSSRPATRRLAVSVLREIRALFALLEIPKGDDELAIDVMDRLSPSILE SFIHLTGADQTTLLYCPSSIDLQMLVEWNSSPISHQFDVISPSHIWIFAHVTQGQDPW IISLSSFLKQENLPKHCSTALSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDS YIGLWRNYLLLCCSAATSTSSSTSTGSVRCSPPETLASTPDSGYSIDSKIIGIPSPSS LFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPENMKRRR RRDILRVQLVRIFELLADAGVISHSASGGLDNETHFLNNTLLEYVDLTRQLLEAENEK DSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTP LDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKV HQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSKRVAAGCFKAIANVFQNRDYQCDTV MLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGVLSQLSPLPHLY SVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLK PLPTARRHDEDEDESVKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDEL AWSEIENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQL LEELVSELQLTDPVSSGVTHMDNPPYYRITSSYKIPSVTSGTTSSSNTMVAPTDGNSD NKPIKENIEESYVHLDIYSGFNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNW RLKVMEHNQGEPLPFPPAGGCWSPLVDYLPETSSPGLPLHRCNIAVILLTDLIIDHSV KVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGSNSNIRTVASVLLRNK EFNEPRVLTVKHIAHLDYTFTAGVSDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAA VSHLHTTVLNEVDISVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTT FLKHVVSVFKQSSSEGVHLEHHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSAST LSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQTSYHDP IMGNKYAANRKSTGQLNLSTSPINSSSYLGYNSNARSNSLRLSLIGDRRGDRRRSNTL DIMDGRINHSNSLARTRSLSSLREKGLYDVQSTTEPTNLMATIFWIAASLLESDYEYE YLLALRLLNKLLIHLPLDKSESREKIQNVQSKLKWNNFPGLQQLFLKGFTSVSTQEMT VHLLSKLIAVSKHTLVDPSQLSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCA EEKCPTLVNLAHMMSLYSTHTYSRDCSNWINVVCRYLHDSFSDTTFNLVTYLAELLEK GLSSMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVV SRSASLVVPNDIPKTYGGDIGSPEISFTKIFNVSKELPGKTLDFHFDISETPIIGNKY GDQHSAAGRNGKPKVIAVTRSTSSTSSGSNSNALVPVSWKRPQLSQRRTREKLMNVLS LCGPESGLPKNPSVIFSSNEDLEVGDQQTSLISTTEDIIQEEEVAVEDNTSEQQFGVF KDFDFLDVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPSLNLTNQ EDTDESSEEEAALTASQILSRRQMLNDSAVDETMPDHPDLLLQSQDSTGSVSTEEVLQ IRDETPSLEPSLDNANNQLPEDTSSVLKEERVITAFEDEGSYIIQEQQDSIVCQGILD LEETDMPEPLAPESYPESICEEDVTLALKELDERCEEEEADFSGLSSQDEEEQDGFPE VQTSPLPSPFLSAIIAAFQPVACDDEEEAWRCHVSQMLSDTDGSCAVFTFHVFSRLFQ TIQRKFGDITNEAVSFLGESLQRIGTKFKSSLEVMMMCSECPTVFVDAETLMSCDLLE TLKFSVLELQEHLDTYNAKREAAEQWLDNCKRTFGAKEDVYRINTDAQELELCRRLYK LHFQLLLLFQAYCKLINQVNTIKNEAEVINMSEELAQLESILKEAEAASENEEIDISK AAQTTIETAIHSLIETLKNKEFISAVGQVKAFRSLWPHDIFGSCEDDPVQTLLHIYFH HQTLGQTGSFAVIGFDLDMSEANYKLMELNLEIRESLRMVQSYQLLAQAKPIGNLVST GF" assembly_gap 7078769..7078858 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7094394..7094562 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7103587..7103615 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7214411..7214447 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7254446..7254497 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7281736..7281752 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7285012..7285024 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7290431..7290573 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7314884..7315333 /estimated_length=450 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7327261..>7347311 /locus_tag="PAL_GLEAN10016088" mRNA join(<7327261..7327318,7327735..7327815,7333327..7333380, 7340978..7341025,7342031..7342166,7343041..7343216, 7347136..>7347311) /locus_tag="PAL_GLEAN10016088" /product="OCIA domain-containing protein 1" CDS join(7327261..7327318,7327735..7327815,7333327..7333380, 7340978..7341025,7342031..7342166,7343041..7343216, 7347136..7347311) /locus_tag="PAL_GLEAN10016088" /codon_start=1 /product="OCIA domain-containing protein 1" /protein_id="ELK03657.1" /db_xref="InterPro:IPR009764" /db_xref="UniProtKB/Swiss-Prot:Q5E948" /translation="MNGRADFREPNAEVARPIPHIGADYIPTEEERRVFAECNDESFW FRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLIFACIMGYFAGKLSYVKTCQEKF KNLENSPLGEALRSGQARRSSPPGHYSQKSKYDSNVSDHSSFVTSPAADNMEKEMFSH YEPVPFSASMNESTPTGITDHIAQGPDPNPEESPKRKSITYEELRNKNRESYEVTLAH KTDPXXXXXXXXXXXXXPKKGMIV" assembly_gap 7337792..7337957 /estimated_length=166 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7347250..7347286 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7356356..>7374789) /locus_tag="PAL_GLEAN10016089" mRNA complement(join(<7356356..7356437,7357382..7357499, 7361607..7361660,7374726..>7374789)) /locus_tag="PAL_GLEAN10016089" /product="OCIA domain-containing protein 2" CDS complement(join(7356356..7356437,7357382..7357499, 7361607..7361660,7374726..7374789)) /locus_tag="PAL_GLEAN10016089" /codon_start=1 /product="OCIA domain-containing protein 2" /protein_id="ELK03658.1" /db_xref="InterPro:IPR009764" /db_xref="UniProtKB/Swiss-Prot:Q3SYY7" /translation="MSAMSGLSDTVAEEAEGGARTTLPFSLVSMLVTQGLVHQVAGIL GFGLGKASYIGVCQSKFHSLDDQLRGAGFGPGHNRHCLLTCEECKIKHGLSEKESSQP SAS" assembly_gap 7367028..7367089 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7384921..7385004 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7388273..7388338 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7394727..7396774 /estimated_length=2048 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7399564..7402194 /estimated_length=2631 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7406860..7407402 /estimated_length=543 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7408108..7408240 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7410110..7410174 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7427724..7428025 /estimated_length=302 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7428059..>7469921 /locus_tag="PAL_GLEAN10016090" mRNA join(<7428059..7428101,7429843..7430034,7433400..7433520, 7433894..7434048,7436864..7437065,7440682..7440770, 7445080..7445337,7447597..7447719,7452231..7452310, 7454654..7454759,7455807..7455942,7462507..7462651, 7466044..7466105,7466865..7467020,7469843..>7469921) /locus_tag="PAL_GLEAN10016090" /product="PGAP2-interacting protein" CDS join(7428059..7428101,7429843..7430034,7433400..7433520, 7433894..7434048,7436864..7437065,7440682..7440770, 7445080..7445337,7447597..7447719,7452231..7452310, 7454654..7454759,7455807..7455942,7462507..7462651, 7466044..7466105,7466865..7467020,7469843..7469921) /locus_tag="PAL_GLEAN10016090" /codon_start=1 /product="PGAP2-interacting protein" /protein_id="ELK03659.1" /db_xref="UniProtKB/Swiss-Prot:Q9H720" /translation="MRSLWREILLETLLGYVSWSLCHGLAPMIYYFPLQTLELTGLEG FGIAFLSPIFLTITPFWKLVNKKWMLTLLRMITVGSIASFQAPNAKLRVMVLALGVSS SLIVQAVTWWTGSGLQRYLRIWGFILGQILLVVLRIWYTSLNPIWSYQMSNRVILTLS VIATLDRISADGDCNKPEERRTREAAKGIACRPHWLLAGAAFGSLMFLTHWIFGEVSL VSRWAVNGHPNPGPDPNPFGGAVLLGLVSGLMLSTCSWFPGTSLIWWVTGAAAAAGLL YLPTWGAAVSGCVLAIFTASMWPQVLGHLISSGSSPGKTMTIAMIFYLLDTFFCAWCT AFKFVPGGVYARERSDVLLGTVMLIIGLNMLFGPKKSLDFLQTKNGPKVLFRKSEKYM KIFLWLLVGVGLLGLGLRHKTYERKLGKRAPATEVSAAIWPFRFGYDNEGWCSLERSA QLLSQTGADFITILESDASKPFIGNNDLAMWLGERLGFYTDFGPSTRDHTWGDDLDRK LQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYRQLIEHGNVKDIDSTDQDRWCEYIMY RGLIRLGYARISHAELSDSEIQMAKFRIPDDPINYRDNQKVVTDHREVPEKIHFNPRF GSYKEGHNYENNHHFHMSTPKYFL" assembly_gap 7484013..7484052 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7487849..7487885 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7494247..7494317 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7495098..7495178 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7498238..7498273 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7498599..7498626 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7513983..>7557108 /locus_tag="PAL_GLEAN10016091" mRNA join(<7513983..7514084,7514264..7514303,7521482..7521596, 7524455..7524546,7530724..7530794,7534095..7534186, 7540571..7540679,7554641..7554745,7556836..7556938, 7557053..>7557108) /locus_tag="PAL_GLEAN10016091" /product="DCN1-like protein 4" CDS join(7513983..7514084,7514264..7514303,7521482..7521596, 7524455..7524546,7530724..7530794,7534095..7534186, 7540571..7540679,7554641..7554745,7556836..7556938, 7557053..7557108) /locus_tag="PAL_GLEAN10016091" /codon_start=1 /product="DCN1-like protein 4" /protein_id="ELK03660.1" /db_xref="InterPro:IPR005176" /db_xref="UniProtKB/Swiss-Prot:Q92564" /translation="MTEFSPFSFKDFQLNSHLSTLANIHKIYHTLNKLNLTEDVGQDD HQTGSLRSCSSSDCFSKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYDSTRIKTEEEA FSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTL QEWLKGMTSLQCDTTEKLRNTLDYLRSLLNDSTNFKLIYRYAFDFAREKDQRSLDINT AKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDEDGA WPVLLDEFVEWYKDKQMS" assembly_gap 7570951..7571083 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7575706..7575947 /estimated_length=242 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7577007..7577042 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7581736..7582528 /estimated_length=793 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7593635..>7610532) /locus_tag="PAL_GLEAN10016092" mRNA complement(join(<7593635..7595949,7597303..7597492, 7602451..7602620,7610040..>7610532)) /locus_tag="PAL_GLEAN10016092" /product="Leucine-rich repeat-containing protein 66" CDS complement(join(7593635..7595949,7597303..7597492, 7602451..7602620,7610040..7610532)) /locus_tag="PAL_GLEAN10016092" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Leucine-rich repeat-containing protein 66" /protein_id="ELK03661.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="UniProtKB/Swiss-Prot:Q68CR7" /translation="MKNLCFRVIAIAISLYFPGTMTNPTRKSSILFNSECQWNGYLLT NCSFTGKPDTSVDISQTAATVDVNYNFFRVLLQFPTKNEWNIKHLDLSNNLISKITIN PRAHLHALEILTLNNNAIHAILLALPSPKSSSMKRQRSNLRNGLLFLKLLILQRNKLS DIPEGLWKLKSLQSLDLSFNKISQIGVSDFHNCLQLENLYLKSNEIFRIHPRAFKDLK KLQVVDLSNNALTTVLPMMLIALELPHLEADLADNQWQCDNSVTVFQHFISESWRKNW NVICNRSIENEEVHRWAPRSRASRETHIPHTSPSHVKSLTRSKAERNREGMYMRFSTL GEKAHASSDTSEQQGQPSQWARNPQDEQAAGRKEATSQDLALAVCLAVFITFFVAFCL GALTRPYVDRLWQQRCQDRSPGSDSAYSNEGFYNEENIQHPRVDLRQTRHDLNLYENQ DSFLGTEVSPHAAVIYDRTLEMSRKEPGSWQSEEQCRGHTRVGSRENNKVPNDSAARS VLQGMQNAGNNAQVSAGQDHTYRNDILGINYETVAQDDFLSEHSVGIPVLAGRSQMGS GSIHKNSNELDPPLSREMTAVLSKMQTHTRAQRTGESEEREGTEQFPLELSKEMQVST CISLLSAQQQKLKAARAEEEPSTCYSSATLSDPGDTDSSPPVIPPEYSGLHVPPANQE PVQKHAPSDTQYELDTNYDSDEGSLFTLSSVSSEDARNMTEGWADGEESCEPPKEEDL RMRKANVTSFESLEDNIAFQKFQEKCENQEACFEKPLFSGPDSGLRESHLESASDTTQ SEGPLTLPGSLGDSPSSDKAPGTFIYDHVAALQSEAAEWHCSLRDLEFFNVDILPQTP PCSAEVSSDPDKNDYRESDSDICTYEPFLQGSDTTQNSIPFQITTGGNLRPSQQDSEG CNMNSSPVDTDTNEGFIRPVADCGSREDRISQTQQLQFCGDEPAHQCERGEGEYFEEG PKSQVPLLQEPPNKTSSLRTQEPFSDRDWGRYSEEKLSQLEKDDSNFYTQMQTESNLM GAGSLGEDWLYYDKDKDIQNQREFK" assembly_gap 7608003..7608016 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7616237..>7630052) /locus_tag="PAL_GLEAN10016093" mRNA complement(join(<7616237..7616440,7619564..7619695, 7620024..7620215,7620872..7621057,7624599..7624808, 7629834..>7630052)) /locus_tag="PAL_GLEAN10016093" /product="Beta-sarcoglycan" CDS complement(join(7616237..7616440,7619564..7619695, 7620024..7620215,7620872..7621057,7624599..7624808, 7629834..7630052)) /locus_tag="PAL_GLEAN10016093" /note="GO_component: GO:0016012 - sarcoglycan complex [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0007010 - cytoskeleton organization [Evidence IEA]" /codon_start=1 /product="Beta-sarcoglycan" /protein_id="ELK03662.1" /db_xref="InterPro:IPR006875" /db_xref="UniProtKB/Swiss-Prot:Q5R9U1" /translation="MIITRSSSMCTLENALSTQPERPRPMKPGGRHGRGWHQPGVMGK EGERERRPHYFEGALSGESGGGPRPRGIPQSSNGPVKKSMREKAVERRNVNKEHNSNF KAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINLIITLVIWAVIRIGPNGCD SMEFHESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLVIIGNNQPIVFQQGTTKLSVE KNKTSITSDIGMQFFDPRTQNILFSTDYETHEFHLPSGVNTLNVQKASTERITSNATS DLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNMELKAENSIILNGTVMVSTTRLPSSS SGDQFGTGDWVRYKLCMCADGTLFKVQVTGQNMGCQIADNPCGNTH" assembly_gap 7629415..7629788 /estimated_length=374 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7630439..7630460 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7636330..>7637028 /locus_tag="PAL_GLEAN10016094" mRNA <7636330..>7637028 /locus_tag="PAL_GLEAN10016094" /product="Fanconi anemia group B protein" CDS 7636330..7637028 /locus_tag="PAL_GLEAN10016094" /codon_start=1 /product="Fanconi anemia group B protein" /protein_id="ELK03663.1" /db_xref="UniProtKB/Swiss-Prot:Q8NB91" /translation="MGLLKVCASFHVEVLVHFNLWIRVETSFSLYLLGSMMLVLFGKR TFRLLLNGKKISLVLIDRTGNEQVLLLFQDSLNSDCPSSFKVTDLDNINYSSETLDCN EDDLFEDKQDRRYLLIPALERRVKVGLTSIREVQQHLLLKEKFILKSYKALVNLVQGK EDSTSSAEVECLVTLCGKEENPVHTFDEKSSDNSQGSEQLVEKVRYRVIDDSLVVGVN TTSSKLSLNWMTLL" assembly_gap 7637224..7637291 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7641868..>7695320 /locus_tag="PAL_GLEAN10016095" mRNA join(<7641868..7641954,7653785..7653890,7654010..7654125, 7661583..7661686,7666111..7666206,7667804..7668070, 7669765..7670149,7671623..7671781,7672675..7672850, 7676909..7676990,7678887..7678970,7681370..7681415, 7695094..>7695320) /locus_tag="PAL_GLEAN10016095" /product="Spermatogenesis-associated protein 18" CDS join(7641868..7641954,7653785..7653890,7654010..7654125, 7661583..7661686,7666111..7666206,7667804..7668070, 7669765..7670149,7671623..7671781,7672675..7672850, 7676909..7676990,7678887..7678970,7681370..7681415, 7695094..7695320) /locus_tag="PAL_GLEAN10016095" /codon_start=1 /product="Spermatogenesis-associated protein 18" /protein_id="ELK03664.1" /db_xref="UniProtKB/Swiss-Prot:Q8TC71" /translation="MAENLKKLVSNEFLRSLPEKLERWQKEYSTNSCDQNLSVCLELI EQVAKVQGQLFGILTTTAQEGGHYDGVEVIKSRLLPWLEASFTAASVGKPVDSRVPSL QDTFDKEKQKESGARDSQLDYELNSTRNQLNQVQDDLAETGKTLEETKNRSSISLLAA EEEINQLRKQLKSLQAQEESRHRNPEHRSATHKSTEQRRTESRRLESRRSEVKAEPRR SEHRRPEQRGSDKRSSDKWSPEATQEYEDQPRTLKDVPQGRSTRSRSPSPAPRSRSRS HSHSHSRSHSHSRSHSRSRSRSRSHSPSRSPTHSPIRNRSRSRSGSPSTAVVKIRTPS PNRAKLSSVARKAALLSRFSDAYSQARLDAQCLLRRCIDKAETVQRIIYIATVEAFHV AKMAFRHFKIRVRKSLSPSYVGSNDFEDAVSDYIICHLDLYDSQSSVNDVIRAMNVNP KISFPPEVDFCLLNNFIQEICCIAFAMQTLEPPLDIAFGADGEIFNDCKYRRSYDSDY TAPLVFYHVWPALMENDTWNSVRSVSRCRSRSLSPIYPRSHIGLSTISRSRSPSPIRC GLPMIILDDIGSPLHSTFRNVLTSVPATTPHLSDERILATEAALHTVPQSDEEATAKT VEVGNSLVLFPQTEHASWLY" assembly_gap 7655766..7658526 /estimated_length=2761 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7675585..7675597 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7714866..7715118 /estimated_length=253 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7765170..7765210 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7778810..7778851 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7782069..7782623 /estimated_length=555 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7787646..7787851 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7791092..7791116 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7815944..7815961 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7825713..7825733 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7846792..7846951 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7862737..7862785 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7868039..7868143 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7874276..7874287 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7898852..7898864 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7928285..7931212 /estimated_length=2928 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7946563..>8044070) /locus_tag="PAL_GLEAN10016096" mRNA complement(join(<7946563..7946664,7947522..7947600, 7950779..7950940,7953119..7953202,7960435..7960511, 7972003..7972232,7973642..7973855,7976399..7976479, 8043870..>8044070)) /locus_tag="PAL_GLEAN10016096" /product="Ubiquitin carboxyl-terminal hydrolase 46" CDS complement(join(7946563..7946664,7947522..7947600, 7950779..7950940,7953119..7953202,7960435..7960511, 7972003..7972232,7973642..7973855,7976399..7976479, 8043870..8044070)) /locus_tag="PAL_GLEAN10016096" /note="GO_function: GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]" /codon_start=1 /product="Ubiquitin carboxyl-terminal hydrolase 46" /protein_id="ELK03665.1" /db_xref="InterPro:IPR001394" /db_xref="UniProtKB/Swiss-Prot:Q5RBQ4" /translation="MAGRLPDWNYGSDLSGPRSICSLLPAVFPVLLPEVIGAAPLILV QNFQAGLPQHRQEHPGHPTHRLPGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCN SVLQALYFCRPFRENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISR LRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKP ELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETL CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLE LRLFNTSSDAVNLDRIGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSD ISKNSESGYILFYQSRE" assembly_gap 7950714..7950744 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7962929..7962962 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7966392..7966424 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7998692..7999539 /estimated_length=848 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8007741..8007901 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8015235..8015371 /estimated_length=137 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8039051..8040374 /estimated_length=1324 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8084417..8084457 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8084842..8084851 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8090997..8091006 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8099546..8099584 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8104670..8104715 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8113156..8113288 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8125838..8125848 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8128648..8128795 /estimated_length=148 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8129032..>8132303 /locus_tag="PAL_GLEAN10016097" mRNA join(<8129032..8129182,8129803..8129859,8130974..8131050, 8131833..>8132303) /locus_tag="PAL_GLEAN10016097" /product="Ras-like protein family member 11B" CDS join(8129032..8129182,8129803..8129859,8130974..8131050, 8131833..8132303) /locus_tag="PAL_GLEAN10016097" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="Ras-like protein family member 11B" /protein_id="ELK03666.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR013753" /db_xref="InterPro:IPR020849" /db_xref="UniProtKB/Swiss-Prot:Q5E9J3" /translation="MRLIQNMCTIAEYPAPGSAAAAAAADYCLGAAGRRLVKIAVVGA SGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLAIQVQDTPGIQVHENGLS CNEQLNRCIRWADAVVIVFSITDYKSYELIGQLHQHVQQLHLGSRLPVVLVANKADLL HIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYNAFHILCKEVSHKQPPSSTPEKRR TSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV" assembly_gap 8139767..8139783 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8140981..>8177214) /locus_tag="PAL_GLEAN10016098" mRNA complement(join(<8140981..8141073,8150638..8150757, 8165941..8166075,8177155..>8177214)) /locus_tag="PAL_GLEAN10016098" /product="Sec1 family domain-containing protein 2" CDS complement(join(8140981..8141073,8150638..8150757, 8165941..8166075,8177155..8177214)) /locus_tag="PAL_GLEAN10016098" /note="GO_process: GO:0006904 - vesicle docking involved in exocytosis [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="Sec1 family domain-containing protein 2" /protein_id="ELK03667.1" /db_xref="InterPro:IPR001619" /db_xref="UniProtKB/Swiss-Prot:Q8BTY8" /translation="MKQFKSVYVPGNHTHQASTYASYKPLLKQIVEEIFNPEKSDPID IEHMSSGLSDLLKTGFSMFMKVSRPHPSDHPLLILFVVGGITVSEAKMIKDLVPSLKP GTQVIVLSTRLLTPLNILELLFATDRLHPDLGF" assembly_gap 8158833..8159083 /estimated_length=251 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8174402..8174496 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8192038..8193715 /estimated_length=1678 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8237353..8237379 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8270449..8270458 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8279920..8279961 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8289052..8289507 /estimated_length=456 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8320505..8320601 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8362521..>8492286) /locus_tag="PAL_GLEAN10016099" mRNA complement(join(<8362521..8362793,8435060..8435235, 8463853..8463980,8489253..8489418,8491449..>8492286)) /locus_tag="PAL_GLEAN10016099" /product="Sec1 family domain-containing protein 2" CDS complement(join(8362521..8362793,8435060..8435235, 8463853..8463980,8489253..8489418,8491449..8492286)) /locus_tag="PAL_GLEAN10016099" /codon_start=1 /product="Sec1 family domain-containing protein 2" /protein_id="ELK03668.1" /db_xref="UniProtKB/Swiss-Prot:Q8WU76" /translation="MSALGVQSFTQQGWEQVLAKVKRALVYLDAACAESLHWGCGSTR LLEAVGGPACHLREFEPAAVAGGAKQPKAVFVLSCLLKGRTVETLRNIICRSHFQYCV VVTATNHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGSMNYTAEVLHVPLLL APVSPYLALTPAFACLFPLLPQDVDLLNSARLDKKRMGSLGEVDSTALTPELLLQIRC LVSGLSSLCEHLGVREECFAVGSLSRIIAADLANYAPAKNRRKTSTSRASVVFVDRTL DLTGTVGHHGDNLVEKIISVLPQLPGHTNDVMVNMVELTALQNEEKQNMIAPGCLAQS NDTAAKALWEALLNSKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLMSYIQLF KNNFKALVNHCGLLQLGLATVQTLKHPQTAKWDNFLAFERLLLQSIGESTISIVLNQL LPMIKPSNQRTNDDYSSEELLILLIYIYSITGEFTEDKDLAEAEEKVKKALVQVFCEE TELSPLLQKVTGECLTKI" assembly_gap 8447369..8447899 /estimated_length=531 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8451002..8451367 /estimated_length=366 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8451848..8455478 /estimated_length=3631 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8467683..8467709 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8487628..8488029 /estimated_length=402 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8498851..>8570873 /locus_tag="PAL_GLEAN10016100" mRNA join(<8498851..8498935,8500220..8500259,8509816..8509880, 8510431..8510538,8510932..8511062,8511356..8511424, 8518969..8519078,8525502..8525609,8534200..8534293, 8535913..8536069,8545228..8545254,8547267..8547321, 8548693..8548748,8555735..8555948,8569982..8570119, 8570726..>8570873) /locus_tag="PAL_GLEAN10016100" /product="Pre-mRNA 3'-end-processing factor FIP1" CDS join(8498851..8498935,8500220..8500259,8509816..8509880, 8510431..8510538,8510932..8511062,8511356..8511424, 8518969..8519078,8525502..8525609,8534200..8534293, 8535913..8536069,8545228..8545254,8547267..8547321, 8548693..8548748,8555735..8555948,8569982..8570119, 8570726..8570873) /locus_tag="PAL_GLEAN10016100" /codon_start=1 /product="Pre-mRNA 3'-end-processing factor FIP1" /protein_id="ELK03669.1" /db_xref="InterPro:IPR007854" /db_xref="UniProtKB/Swiss-Prot:Q5RAA7" /translation="MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENARSY GTAPVNLNIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGAD LSDYFNYGFNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDG RFNLFKVQQGRTGNSEKETVLPSTKAEFTSPPSLFKAGLPPSRNSTSSQSQTSTASRK ANSSVGKWQDRYGRAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERS ATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFP PPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWD YYARREKDRDRDRDRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREY AERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKS KRSKEGKETGSEPAPEQESTEATPAE" assembly_gap 8501274..8501284 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8556860..8558305 /estimated_length=1446 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8570501..8570597 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8572282..>8660682) /locus_tag="PAL_GLEAN10016101" mRNA complement(join(<8572282..8572417,8572820..8572978, 8576776..8577004,8578409..8578586,8582809..8582943, 8594988..8595359,8597753..8597925,8602248..8602400, 8602911..8603152,8660291..>8660682)) /locus_tag="PAL_GLEAN10016101" /product="E3 ubiquitin-protein ligase LNX" CDS complement(join(8572282..8572417,8572820..8572978, 8576776..8577004,8578409..8578586,8582809..8582943, 8594988..8595359,8597753..8597925,8602248..8602400, 8602911..8603152,8660291..8660682)) /locus_tag="PAL_GLEAN10016101" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase LNX" /protein_id="ELK03670.1" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR018957" /db_xref="UniProtKB/Swiss-Prot:Q8TBB1" /translation="MSQSDPVDDPDPSPATLCVVCGQAHSPEENHFYTYTEDVDDDLI CHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPVDRQPVVLQHCKKSSILVHKLL NKLMVTCPFTEHCTEVVQRCDLEHHFQNSCKGASHYGLTKDRKRRSHDGCPDGCASLT AATLSPEVSAAATISLMTDEPGLDNPAYVSTAEDGQPVNNPLDFGRSHRTRARPFERS SIRSRSFKKINRALSVLRRTKSGSVVANQTDQGRENSENATAPEDGEITSIKINRVDP NESLSIRLVGGSETPLVHIIIQHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYA LRLLRQPCRLLRLTVLREQKFRSRSNGQTLDPCGPRDDSFHVILNKRSPEEQLGIKLV RKVDEPGVFVFNVLDGGVADRHGQLEENDRVLAINGHDLRFGSPESAAHLIQASERRV HLIVSRQVRQQSPDIFQEARWRNSGSQSLRPGDRSNTPKPLHPAVTCHEKVISVRKDP SESLGMTVAGGATHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVNGIELTEVSRS EAVTLLKSTSSSVVLKALEVKQCEPQEDNSSLAALDSNHNAAPSGDWSPSWVMWLELP RYLYNCKDVILRRNTAGSLGFCIVGGYEEYNGNKPFFIKSIVEGTPAYNDGRIRCGDI LLAVNGRSTSGMIHACLARMLKELKGKITLTIVSWPGTFL" assembly_gap 8587166..8587558 /estimated_length=393 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8619855..8620366 /estimated_length=512 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8655217..8655479 /estimated_length=263 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8660987..8661001 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8685582..8685655 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8710969..8710987 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8748095..8748916 /estimated_length=822 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8758970..8758984 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8767193..8767422 /estimated_length=230 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8806685..8806724 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8810047..8810122 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8810513..8810576 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8826158..8826192 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8836938..8838424 /estimated_length=1487 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8864376..8864460 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8897958..8898672 /estimated_length=715 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8942484..8942582 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8972046..>9046089) /locus_tag="PAL_GLEAN10016102" mRNA complement(join(<8972046..8972072,9010526..9010585, 9010752..9010808,9030032..9030103,9030251..9030305, 9045917..>9046089)) /locus_tag="PAL_GLEAN10016102" /product="Cysteine-rich hydrophobic domain 2 protein" CDS complement(join(8972046..8972072,9010526..9010585, 9010752..9010808,9030032..9030103,9030251..9030305, 9045917..9046089)) /locus_tag="PAL_GLEAN10016102" /codon_start=1 /product="Cysteine-rich hydrophobic domain 2 protein" /protein_id="ELK03671.1" /db_xref="InterPro:IPR019383" /db_xref="UniProtKB/Swiss-Prot:Q9UKJ5" /translation="MADFDEIYEEEEDEERALEEQLLKYSPDPVVVRGSGHVTGGGPE EGEGEGEGGRFRAGFGLSNKFESEFPSSLTGKVAPEEFKASINRVNSCLKKNLPVNTR RSIEKLLEWENNRLYHKLCLHWRLSKRKCETNNMMEYIWSPYSQF" assembly_gap 8978297..8978360 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8981159..8981208 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8996759..8996887 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9040192..9040204 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9048996..9049036 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9075201..>9076795 /locus_tag="PAL_GLEAN10016103" mRNA join(<9075201..9075774,9076455..>9076795) /locus_tag="PAL_GLEAN10016103" /product="GS homeobox 2" CDS join(9075201..9075774,9076455..9076795) /locus_tag="PAL_GLEAN10016103" /note="GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="GS homeobox 2" /protein_id="ELK03672.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR020479" /db_xref="UniProtKB/Swiss-Prot:Q9BZM3" /translation="MSRSFYVDSLIIKDSSRPAPSLPEPHPGPDFFIPLGMPSPLVMS VSGPGCPSRKSGAFCVCPLCVTSHLHSSRGPAGSGSGGSGSGSAGTGAGGVAGGAGAL PLLKSQFSSGPGDAQFCPRVSHAHHHHHPPQHHHHHHQPQQPGPAAAAAAAAAAAAAA AALGHPQHHAPVCAATTYNVADPRRFHCLTMGGSDASQVPNGKRMRTAFTSTQLLELE REFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGTQRNSHAGCKCVG SQAHYARSEDEDSLSPASANDDKEISPL" assembly_gap 9139268..9139287 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9147253..9147314 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9147565..9147618 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9149111..>9180172 /locus_tag="PAL_GLEAN10016104" mRNA join(<9149111..9149159,9150640..9150954,9152167..9152427, 9153575..9153705,9155326..9155497,9155588..9155777, 9159294..9159409,9160372..9160498,9161590..9161783, 9162692..9162786,9162999..9163131,9164840..9164944, 9165335..9165445,9165700..9165853,9166723..9166889, 9169120..9169235,9169583..9169705,9171068..9171179, 9172461..9172560,9172675..9172780,9173619..9173860, 9180025..>9180172) /locus_tag="PAL_GLEAN10016104" /product="Alpha-type platelet-derived growth factor receptor" CDS join(9149111..9149159,9150640..9150954,9152167..9152427, 9153575..9153705,9155326..9155497,9155588..9155777, 9159294..9159409,9160372..9160498,9161590..9161783, 9162692..9162786,9162999..9163131,9164840..9164944, 9165335..9165445,9165700..9165853,9166723..9166889, 9169120..9169235,9169583..9169705,9171068..9171179, 9172461..9172560,9172675..9172780,9173619..9173860, 9180025..9180172) /locus_tag="PAL_GLEAN10016104" /note="GO_component: GO:0005887 - integral to plasma membrane [Evidence IEA]; GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0048010 - vascular endothelial growth factor receptor signaling pathway [Evidence IEA]" /codon_start=1 /product="Alpha-type platelet-derived growth factor receptor" /protein_id="ELK03673.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR009134" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P16234" /translation="MGTSHPALLVLGCLLAGPSLILCQLSLPSILPNENEKVVQLNSS FSLRCFGESEVSWQYPLFDENSNVEIRNEENNSGLFVTVLEVVNASAAHTGLYTCYYN HTQTEENEIEGRRIYIYVPDPDVAFVPLGMTDYLVIVEDDDFAIIPCRTTDPDTPVTL LGSDGVVLASYDSRQGFNGTFTVGLYICEATVRGRKFQTIPFNVYALKATSELDLEME APKTVYKSGETVVVTCAVFNNEVVDLQWTYPGEVRGKGVTTLEETKVPFIKLVYTLRV PGATVKDSGEYGCAARQATREVKEMKKVTISVHEKGFIEIKPNFSQLEAVNLHEVKHF VVDVQAYPPPRISWLKDNLTLIENLTEITTDIEKIQEIRYRSKLKLIRAKEEDSGHYT IIVQNEDDAKSYTFELLTQVPSSILDLVDDHHGATGGQTVRCTAEGTPLPDIEWMICK DIKKCNNETSWTILANNISNIVTEVHLRDRSTVEGRVTFAKVEETIAVRCLAKNLLGA ENRELKLVAPTLRSELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESISP DGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVA VKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLV NYLHKNRDSFLSRHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQ YVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFT YQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFL PVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRM AKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSD HPAVARMRVDADNAYIGVTYKNEEDKLKDWEGGLDEQRLSADSGYIIPLPDIDPVPEE EDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSDLVEDSFL " assembly_gap 9179715..9179759 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9199459..9199487 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9215248..9216123 /estimated_length=876 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9230966..9231497 /estimated_length=532 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9235141..9235188 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9260531..9260543 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9267607..9268450 /estimated_length=844 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9290860..9290888 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9319445..9321989 /estimated_length=2545 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9334083..9334457 /estimated_length=375 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9348040..9348542 /estimated_length=503 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9408761..9408884 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9473347..9473521 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9504759..>9546524 /locus_tag="PAL_GLEAN10016106" mRNA join(<9504759..9505110,9507751..9508032,9509110..9509246, 9513229..9513400,9517185..9517374,9534584..9534765, 9535963..9536069,9536163..9536289,9536562..9536666, 9540073..9540192,9540715..9540842,9541897..9542019, 9544465..9544576,9544690..9544789,9545140..9545245, 9546396..>9546524) /locus_tag="PAL_GLEAN10016106" /product="Mast/stem cell growth factor receptor" CDS join(9504759..9505110,9507751..9508032,9509110..9509246, 9513229..9513400,9517185..9517374,9534584..9534765, 9535963..9536069,9536163..9536289,9536562..9536666, 9540073..9540192,9540715..9540842,9541897..9542019, 9544465..9544576,9544690..9544789,9545140..9545245, 9546396..9546524) /locus_tag="PAL_GLEAN10016106" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Mast/stem cell growth factor receptor" /protein_id="ELK03674.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q28317" /translation="MEINIGRNALFRQGKRSYSTRFSFFLAGSSQPSVSPGELSPPSI HPAESELRVSVGDEIRLLCTDPGFVKWTFETLGQLSEKTYNEWVMEKAEATNTGNYTC TNKDGLSSSIYVFVRDPAKLFLIDLPLYGKEGNDTLVRCPLTDPEVTNYSLMGCEGKP LPKDLTFVADPKAGITIRNVKREYHRLCLHCSADKKGKSVLSKKFSLKVRAAIRAVPV VSVSKASYLLREGEEFTVTCLIKDVSSSVDSMWIKENSQPTKAQVKRNSWHQGDFNFL RQERLTISSAKVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPVANTTIFVNDG ANVDLVVEYEAYPKPEHLQWIYMNKTFTDKWESYPKYENESNIRCSVPVGPVDVQIQN SSVSPFGKLVVQSSIDYSAFKLNGTVECRAYNDVGKSSAFFNFAFKEQIHPHTLFTPL LIGFVIAAGMMCIIVMILTYKYLQKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKWE FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKRFDGCFISPSSDSTN EYMDMKPGVSYVVPTKADKRRSARIGSYIERDVTPAIMEDDELALDLEDLLSFSYQVA KGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKW MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE HAPAEMYAIMKTCWDADPLKRPTFKQIVQLIEKQISDSTNHIYSNLANWSPNQESAVV DHSVRINSVGSSASSTQPLLVHEDV" assembly_gap 9531996..9532078 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9577221..9577248 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9601453..9602018 /estimated_length=566 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9609669..9609695 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9635822..9635864 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9664719..9664902 /estimated_length=184 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9689910..9689958 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9697021..9697037 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9700105..9700121 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9709990..9710039 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9712343..9712390 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9722785..9722808 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9724007..9724055 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9786746..9786778 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9793261..>9835958) /locus_tag="PAL_GLEAN10016107" mRNA complement(join(<9793261..9793483,9795249..9795334, 9795829..9795928,9796419..9796443,9800980..9801091, 9802223..9802328,9802732..9802831,9803086..9803197, 9803351..9803473,9805684..9805781,9807679..9807832, 9808438..9808526,9809091..9809204,9810519..9810623, 9810992..9811127,9811550..9811656,9813972..9814103, 9814439..9814585,9816635..9816955,9817624..9817732, 9818238..9818361,9819250..9819406,9821256..9821419, 9821507..9821621,9822991..9823168,9823817..9823956, 9824528..9824696,9824936..9825066,9828104..9828300, 9830268..9830361,9835892..>9835958)) /locus_tag="PAL_GLEAN10016107" /product="Vascular endothelial growth factor receptor 2" CDS complement(join(9793261..9793483,9795249..9795334, 9795829..9795928,9796419..9796443,9800980..9801091, 9802223..9802328,9802732..9802831,9803086..9803197, 9803351..9803473,9805684..9805781,9807679..9807832, 9808438..9808526,9809091..9809204,9810519..9810623, 9810992..9811127,9811550..9811656,9813972..9814103, 9814439..9814585,9816635..9816955,9817624..9817732, 9818238..9818361,9819250..9819406,9821256..9821419, 9821507..9821621,9822991..9823168,9823817..9823956, 9824528..9824696,9824936..9825066,9828104..9828300, 9830268..9830361,9835892..9835958)) /locus_tag="PAL_GLEAN10016107" /note="GO_component: GO:0005887 - integral to plasma membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0019838 - growth factor binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0048010 - vascular endothelial growth factor receptor signaling pathway [Evidence IEA]" /codon_start=1 /product="Vascular endothelial growth factor receptor 2" /protein_id="ELK03675.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR009134" /db_xref="InterPro:IPR009136" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013151" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P35968" /translation="MGSKALLAIALWLCVETWVASVGLPGISLDPPRLSVQKDILTIM ANTTLQITCRGQWDLDWLWPNNRSGSEKRVEVTECSDSFFCKTLTIPKVIGNDTGAYK CFYRDRDSASVVYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLDVS LCARYPEKRFVPDGNRIFWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVAV VGYKIYDVVLSPPHGVELSVGEKLVLNCTARTELNVGIDFTWEYPSSEHQHKKLVNRD LKAQSGSEMKKFLSTFTVDAVTRNDQGWYTCAASSGMMTRKNSTFVRVHEKPFVAFGS GMESLVEATVGDRVRVPVKYLGYPSPEIKWYKNGRPIESNHTIKVGHVLTIMEVSEKD TGNYTVILTNPISKEKQSHVVSLVVNVPPQIGEKSLISPVDSYKYGTTQTLTCTVYAI PPPRYVYWYWQLEEECTYNPTQAVLMTNPYTCKDWRNVEDFQGGNKIEVNKNQFALIE GKNKTVSTLVIQAANVSALYKCEAVNKAGRGERVISFHVTRGPEITVQPGGQPTEQES VSLWCSADRTTFENLTWYKLGPQAVPTPVCKNLDALWKMNATMFSNSTNDILIMELQN TSLQDQGDYVCFAQDRKTKKRHCVVTQLTILERMAPRMTGNLENLTTSIGETIEVSCT ASGNPLPRISWFKDNETLVEDSGIILKDGNQNLTIPRVRKEDEGLYTCQACSVLGCAK VEAFFIVEGAQEKTNLEVIILVGTAVIAMFFWLLLVIILRTVKRANGGELKTGYLSIV MDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCK TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF GNLSTYLRSKRNEFVPYKTKGARFRPGKEYVGEITVDPKRRLDSITSSQSSASSGFVE EKSLSDVEEEEVSEDLYKNFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPNQRPTF SELVEHLGNLLQANAQQDGKDYIVLPISETLSMEEDSGLSLPTSPVSCMEEEETYPAR FSILCQYLQNSKLKSRPVSVKTFEDIPMEEPEVKVIPDDNQTDSGMVLASEELKTLED RTKLAPSFSGLMLSKSKESVASEGSNQTSGYQSGYHSDDTETTVYSSEEAELLKLMEI EPQAGSAPQILQPDSGTILSSPPV" assembly_gap 9800892..9800964 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9833685..9835572 /estimated_length=1888 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9882535..9882597 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9884421..9884469 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9916240..9917602 /estimated_length=1363 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9921282..9921330 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9958855..9958892 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9992413..9992468 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9992607..>10006253 /locus_tag="PAL_GLEAN10016110" mRNA join(<9992607..9992827,9999446..9999588, 10001399..10001596,10004970..10005104,10005994..>10006253) /locus_tag="PAL_GLEAN10016110" /product="3-oxo-5-alpha-steroid 4-dehydrogenase 3" CDS join(9992607..9992827,9999446..9999588,10001399..10001596, 10004970..10005104,10005994..10006253) /locus_tag="PAL_GLEAN10016110" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]" /codon_start=1 /product="3-oxo-5-alpha-steroid 4-dehydrogenase 3" /protein_id="ELK03676.1" /db_xref="InterPro:IPR001104" /db_xref="UniProtKB/Swiss-Prot:Q9H8P0" /translation="MAAWAGAELSALTPLRALWLTLAAAFLLTLLLQLVPPGLLPSCA LFQDLIRYGKTKSRASLRPAVCLSFDVPKRYFSHFYMVSVLWNGFLIWCLTQSLFMGV PFPYWLHALLRILGTVQFRGGELALSAFLVLVFLWLHSLRRLFECFYVSVFSSAVIHI VQYCFGLVYYVLVGLTVLSQVPMDGRNVYVIGKNLLMQARWFHILGMMMFIWSSVHQY KCHVILGNLRKNKAGVIIHCNHRIPFGDWFEYVSSPNYLAELMIYISMAVTFGFHNLT WWLVVTYVFFSQALCAFLSHRFYQSKFVSYPKHRKAFLPFLF" assembly_gap 10004272..10004289 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10030951..>10049704 /locus_tag="PAL_GLEAN10016111" mRNA join(<10030951..10031160,10040869..10041094, 10047549..10047724,10048247..10048429,10049312..>10049704) /locus_tag="PAL_GLEAN10016111" /product="Transmembrane protein 165" CDS join(10030951..10031160,10040869..10041094, 10047549..10047724,10048247..10048429,10049312..10049704) /locus_tag="PAL_GLEAN10016111" /note="GO_component: GO:0016020 - membrane [Evidence IEA]" /codon_start=1 /product="Transmembrane protein 165" /protein_id="ELK03677.1" /db_xref="InterPro:IPR001727" /db_xref="UniProtKB/Swiss-Prot:Q9HC07" /translation="MAAAAARGSGRASAPWLLLLLLVPLLCVPAGVRAVPDEDLSHRN KEPPAPAQQLQPQPAAAQGPEPARAEKGLTPAAPVHNNKEDPDTQTNLGFIHAFVAAI SVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYT YYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDIE TGTSTTIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREGSHDLMGLRKL SFLYALTHVPVNEGTLGIHQVASPGFSNSCGVAQHTHSSLYFGQSPPGSNGRLIINAN SEASEAPVHKLGAALGLDDGNGSIDIFGNHITHGTTGSKPCIYRGERHISPSGWLAQS THW" assembly_gap 10035057..10035090 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10049749..>10052388 /locus_tag="PAL_GLEAN10016113" mRNA join(<10049749..10049892,10051690..10051795, 10052312..>10052388) /locus_tag="PAL_GLEAN10016113" /product="Transmembrane protein 165" CDS join(10049749..10049892,10051690..10051795, 10052312..10052388) /locus_tag="PAL_GLEAN10016113" /note="GO_component: GO:0016020 - membrane [Evidence IEA]" /codon_start=1 /product="Transmembrane protein 165" /protein_id="ELK03678.1" /db_xref="InterPro:IPR001727" /db_xref="UniProtKB/Swiss-Prot:Q9HC07" /translation="MTGTCGQREVDVEIGHQVGRDCPINVQGSIKSQGSSDGGYNLTY YSIQDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFI SPDSGF" gene complement(<10061687..>10193288) /locus_tag="PAL_GLEAN10016114" mRNA complement(join(<10061687..10061866,10064738..10064834, 10068172..10068374,10069103..10069312,10070127..10070279, 10073175..10073264,10073785..10073885,10075545..10075686, 10081682..10081757,10084033..10084115,10088987..10089105, 10089242..10089355,10093159..10093279,10103562..10103653, 10106549..10106697,10110410..10110469,10177518..10177661, 10187414..10187545,10189343..10189477,10192629..10192719, 10193258..>10193288)) /locus_tag="PAL_GLEAN10016114" /product="Circadian locomoter output cycles protein kaput" CDS complement(join(10061687..10061866,10064738..10064834, 10068172..10068374,10069103..10069312,10070127..10070279, 10073175..10073264,10073785..10073885,10075545..10075686, 10081682..10081757,10084033..10084115,10088987..10089105, 10089242..10089355,10093159..10093279,10103562..10103653, 10106549..10106697,10110410..10110469,10177518..10177661, 10187414..10187545,10189343..10189477,10192629..10192719, 10193258..10193288)) /locus_tag="PAL_GLEAN10016114" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Circadian locomoter output cycles protein kaput" /protein_id="ELK03679.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR012336" /db_xref="UniProtKB/Swiss-Prot:O15516" /translation="MVLHLQKEAMVKPYEKMTLAQLKEAEDEFDDEDMRAIETYRWSH RPYPGCARPQVRQALGACREHVGGDTLPSKIQFLRENGNIHRWSHGPYPGVLGLGHWA PGAGLVCVGGDTLPSKIQFLRENGNIHREKRLQEWKALKKKQKFGELREISGNQYVNE VTNADKDVWVIIHLYRSRDDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKE LGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLM LESDLVDQSIFNFIPEGEHSEVYKILSTHLLERDSLTPEYLKSKNQLEFCCHMLRGTI DPKEPSTYEYVKFIGNFKSLNNVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRLATP QFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHSYAEVRAERRRELGIEESLPEIAADKS QDSGSDNRINTVSLKEALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTST PPRQHLPGHEKMAQRRSSFSSQSINSQSVGQSLTQPVMSQATNLPVPQGMSQFQFSAQ LGAMQHLKDQLEQRTRMIEANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSTPGLNFG SVQLSSGNSSNIQQLAPINMQGQVVQTNQIQSGMNTGHIGTTQHMIQQHTLQSTSSQS QQNVLSGHSQQTSLPSQTQSTLTAPLYNTMVISQPAAGSMVQIPSSMPQNSTQSAAVT TFTQDRQIRFSQGQQLVTKLVTAPVACGAVMVPSTMLMGQVTSRLLHGNPSTQLILSA AFPLQQSTFPQSHHQQHQSQQQQQLNRHRTDSLTDPSKVQPQ" assembly_gap 10066097..10066136 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10086694..10087883 /estimated_length=1190 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10103949..10104011 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10118203..10118215 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10144988..10145041 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10157103..10157118 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10181786..10181937 /estimated_length=152 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10200922..10204443 /estimated_length=3522 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10217918..>10241187) /locus_tag="PAL_GLEAN10016115" mRNA complement(join(<10217918..10218049,10224798..10224857, 10228167..10228214,10234862..10234920, 10241076..>10241187)) /locus_tag="PAL_GLEAN10016115" /product="Neuromedin-U" CDS complement(join(10217918..10218049,10224798..10224857, 10228167..10228214,10234862..10234920,10241076..10241187)) /locus_tag="PAL_GLEAN10016115" /codon_start=1 /product="Neuromedin-U" /protein_id="ELK03680.1" /db_xref="UniProtKB/Swiss-Prot:P48645" /translation="MPPVASRRPGLSPGQAAAAFRLLALLLLLSYCARACRGAPILLQ GLQPEQELQLWNEIDATCSSFLSIGSQPQVTNALEELCLMIMGTLPKSQSSVVHPLLQ LVPQLYERRMKRFKVDVRNMNCMLALTLCVGQFY" assembly_gap 10275929..10275947 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10277632..10277705 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10313203..10314348 /estimated_length=1146 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10353919..10353990 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10359325..10359375 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10394888..>10401146 /locus_tag="PAL_GLEAN10016116" mRNA join(<10394888..10395034,10400880..>10401146) /locus_tag="PAL_GLEAN10016116" /product="Exocyst complex component 1" CDS join(<10394888..10395034,10400880..10401146) /locus_tag="PAL_GLEAN10016116" /codon_start=1 /product="Exocyst complex component 1" /protein_id="ELK03681.1" /db_xref="UniProtKB/Swiss-Prot:Q8R3S6" /translation="FFCPTVTKSEEVKIIMVKHYRIGLDEKYEVTKKWSLNDLQMIDG KEADTDNPFFDLHFKKVYSLEAYSCASKYAFARTVNKLNHEYLKKDLQIVNFDSTYIN DDSIWSSNNKDCLVLMRICFYAFNLVCLSLCPLPL" gene <10419745..>10473431 /locus_tag="PAL_GLEAN10016117" mRNA join(<10419745..10419868,10422831..10422961, 10425779..10425938,10428604..10428624,10430103..10430290, 10432225..10432452,10432655..10432787,10439630..10439739, 10449179..10449328,10456309..10456414,10460356..10460400, 10461610..10461773,10462340..10462447,10463633..10463709, 10464189..10464417,10468294..10468345,10468878..10469077, 10471457..10471651,10473279..>10473431) /locus_tag="PAL_GLEAN10016117" /product="Exocyst complex component 1" CDS join(10419745..10419868,10422831..10422961, 10425779..10425938,10428604..10428624,10430103..10430290, 10432225..10432452,10432655..10432787,10439630..10439739, 10449179..10449328,10456309..10456414,10460356..10460400, 10461610..10461773,10462340..10462447,10463633..10463709, 10464189..10464417,10468294..10468345,10468878..10469077, 10471457..10471651,10473279..10473431) /locus_tag="PAL_GLEAN10016117" /codon_start=1 /product="Exocyst complex component 1" /protein_id="ELK03682.1" /db_xref="InterPro:IPR019160" /db_xref="UniProtKB/Swiss-Prot:Q9NV70" /translation="MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTT ERPVQVKVVKVKKSDKGDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVA SSTAEKNAFISCIWKLNQRYLRKKIDFVNVSSQLLEELPKVTEESVPSGENQSVTGGD EEAVDEYQELNAREEQDIEIMMEGCECAISNAEAFAEKLSRELQVLDGANIQSIMASE KQVNILMKLLDEALKEVDQIELKLSSYEEMLQSVKEQMDQISESNHLIHLSNTNNVKL LSEIEFLVNHMDLAKGHIKALQEGDLASSRGIEACTNAADALLQCMNVALRPGHDMLL AVRQQQQRFSDLREHFARRLASHLNNVFVQQGHDQSSTLAQHSVELTLPNHHPFHRDL LRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYEREIKDFFEVAKIKMTGTTKESKKF ATLPRKESAVKQETESLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSSSLLDMGNMSAS DLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMTETDDLDGGT LSRQPNSGAPLPVSSEKDMIRQMMTKIFRCIEPELNNLIALGDKIDSFNSLYMLVKMS HHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCIGDLDKAYTKLIRGVFVNVEKVANE SQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEK LNHFFEGVEARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKH LCEEENLLQVVWHSMQDEFIRQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQS H" assembly_gap 10434625..10436196 /estimated_length=1572 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10440867..10442730 /estimated_length=1864 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10450176..10450207 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10483193..10483822 /estimated_length=630 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10494416..10494449 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10494695..10494736 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10497533..>10554508 /locus_tag="PAL_GLEAN10016118" mRNA join(<10497533..10497645,10499077..10499267, 10500027..10500194,10502333..10502474,10504325..10504409, 10507751..10507879,10509101..10509316,10512015..10512080, 10515443..10515581,10518567..10518790,10522630..10522782, 10523648..10523800,10527556..10527633,10532366..10532517, 10540955..10541070,10541147..10541301,10541732..10541787, 10542527..10542695,10543553..10543663,10543938..10544123, 10550048..10550257,10551130..10551332,10552248..10552352, 10554328..>10554508) /locus_tag="PAL_GLEAN10016118" /product="Centrosomal protein of 135 kDa" CDS join(10497533..10497645,10499077..10499267, 10500027..10500194,10502333..10502474,10504325..10504409, 10507751..10507879,10509101..10509316,10512015..10512080, 10515443..10515581,10518567..10518790,10522630..10522782, 10523648..10523800,10527556..10527633,10532366..10532517, 10540955..10541070,10541147..10541301,10541732..10541787, 10542527..10542695,10543553..10543663,10543938..10544123, 10550048..10550257,10551130..10551332,10552248..10552352, 10554328..10554508) /locus_tag="PAL_GLEAN10016118" /codon_start=1 /product="Centrosomal protein of 135 kDa" /protein_id="ELK03683.1" /db_xref="InterPro:IPR009053" /db_xref="UniProtKB/Swiss-Prot:Q66GS9" /translation="MTTAAERKYINIRKRLDQLGYRQTLTVECLPLVEKLFSDLVHTT ESLRKSKLSSVKAEKESANFDFVLEPYKLENARLSRENNELYLELMKLREQSAQHIKE LKTTLKKCACETADLKFLNNQYVHKLKLLEKESKAKNERIQQLQEKNLHAVVQTPGGK KRSIAFRRQRMQIDEPAPPSEVSSYPVPQPDDPYIADLLQVADNRIQELQQEVHQLQE KLSVMESGLRDYNKQIELREREIERLSIALDGGRSSDILSLETKNKTNEKLIAHLNIQ VDFLQQANKDLEKHIQELMETKDTVTTEVVNLSNKNEKLCQELSEIDQLAQQLERHKE EVLETADKELGEAKKEIKRNLSEMRNLEETMAKLQLELNLCHKEKERLNDELLIKSDL ETVVHQLEQEKQRLAKKLESFAVTERELTLEVERMRLEHGIKRRDKSPSRLDTFLKGI EEERDFYKKELERLQHIIQRRSCSTNYSAREKIPIFKTLEKGDYNSEIHLITRERDEL QHMLEKFEKYMEDIQSNVKLLTAERDKLSVLYNEALVELSSLRQESTQSTVSHNIVSL MEKEKELVLSDLRRIMAEKEALKDKLKNLQEMSLLGKSELEKTIEHLTCINHQLEDEN CELKSKILIMKEAIDSLESKAKLQAHKLNHVAGDSSLQKTEMNSLRIVNEQLQRSLDD YQHRLSLKRGELESAQAQIKILEEKISKIHLKMTSQDEEAHVMKKTIGVIDKEKDFLQ ETVDEKTEQIANLQENLANKENVIAQMKITVSEYESSLNQLKETLTSRDREISSLRRQ LDAAHKELDEVGKSKEISFKENRRLQDDLATVARENQEISLELEAAVQEKEEMKSRVH NYITEVSRWESLMAAKEKENQDLLDRFQMLHDRAEDWEVKAHQAEGESSSVRLELLSI DTERRHLRERVELLEKEIQEHINAHHAYESQISSMAKAVSRLEEELRHQEDEKAAVFN DLSSLRELCIKLDSGKDILTQQLNSKSLEFERVVVELENIKSESELLKKQLSSERLTI KNLESLLATNRDKEFHSHLTSHEKDTEIQLLKEKLTLSESKLTSQSRENTMLRAKVAQ LQTDHDALKRQISTERYERERAVQEMRRHGLPTPPLSSTLRSPSHSPEHINIYTDNYQ KGMYVTPRTKKTNLWLKFIK" assembly_gap 10517463..10517513 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10533830..10535072 /estimated_length=1243 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10545278..10545547 /estimated_length=270 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10574012..10574348 /estimated_length=337 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10608078..10608117 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10610071..10610139 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10631137..10631163 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10641239..10641397 /estimated_length=159 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10681009..10681234 /estimated_length=226 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10712502..10712525 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10756228..10756381 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10765411..10765436 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10787609..>10814736 /locus_tag="PAL_GLEAN10016120" mRNA join(<10787609..10787728,10795372..10795536, 10797373..10797441,10799623..10799805,10800484..10801929, 10802011..10803208,10811629..10811825,10812411..10812600, 10814576..>10814736) /locus_tag="PAL_GLEAN10016120" /product="hypothetical protein" CDS join(10787609..10787728,10795372..10795536, 10797373..10797441,10799623..10799805,10800484..10801929, 10802011..10803208,10811629..10811825,10812411..10812600, 10814576..10814736) /locus_tag="PAL_GLEAN10016120" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03684.1" /db_xref="UniProtKB/Swiss-Prot:Q5PR69" /translation="MGTRAFSHDSIFIPDGGAESEQTVQAMSQDHILGKVKTLQRQLG KNIKFGQPPPSAIPMKKADSGEASLEEDLFLTSPMEIVTHQDIILSDTENKSSDTTSS LSPLNLPGARSEMEEKVAPAKPSRPKRHFSSAGTIESVNLDAIPLAIARLDNSAAKHK LSVKPKNQRVSKKHRRLAGDQPDEQGGLLHQLSLDQNGHPGEDKPIWPEEEPEPLDSE EEKRRQEEYWRELEAKCKRQKAEAAERRRLEEQRLQALERRLWEESRRQELLEEQEEE EEGEQRDLQLEAEKRQCEEGRRRLQEQGGQGQEQREQEERRHLAAEEQKRLEEEAERL ERLAQQEELEELEAQRRQEAEKQLLEEEERRLEELRQQEELEQRRQEEEDRLKELRRQ EELGEQRQREEEAKRREELRKKQEEFEVQKEAGKKPQEAPTEESGLELDDIRGRVRSP LQADFAEKPEKPEQEHLKPEKQRENFEEPNVCEKQSQEAEPSGEQQEKQGDFHGEDRC EGQEKGDEINLSPPQKQEVQVGERLAPVEKKEAAAPEKDRKVEELRWQEVDERQTMPR PYTFQVSSGGKQILFPKVNLSPVTPMKDAGLASASHEPKALKASPAPHALPSSLSIPH TAILVTGAQLCGPAVNLSQIKDTACKSLLGLAEEKKHQSPSSVTALAEWASIRSRILK NAESDQNSRRDQSQPGEEHTPRGQCDSRGNLRKTPPVNAKFSIMPAWQKFSAGSTETS KQNTEAESIRKRFVLGTSDEIAPPPLAADDNEHEKGTEKLGVHQEPADTTEGCKFAKD LPSFLVPSLPYPPQKAVAHAEPVTTSDSEITSGMGKPDPAMLGREEKASPFGIKLRRT NYSLRFHCDQQTEQKKKKRHSSIGDSANGGPPAPGNTHGEKETESLALKRGPSLPLER KQVPSTWKDSAESPSIHSPAAQPGPPLASSQTSTPEHDKAANRMPLAQKPALAPKPTS QTPPSSPLCKLSRPYLVELLARRPGKPDPEPSEPCGGPQPPSPPSPEERKARRRDEEE EMETERKPTSPALSAVQQEKPPQTPEVGRREKPVLQSRHSLDGSKLVEKVESAQPQPL WVTLALQKQKGFREQQATREERKQARETKQAEKLPRENVSVSLQPGSSSVSRAGSLHK VSAQPEEKKPEEKPEEKKPETAVSRLERREQLKKANTLPTSVTVEISDSAPPAPLVKE VTKRFSTPDVAPVSTEPAWLALAKRKAKAWSDCPQIIK" assembly_gap 10808377..10808397 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10814431..10814455 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10823109..10825835 /estimated_length=2727 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10829927..>10853029) /locus_tag="PAL_GLEAN10016124" mRNA complement(join(<10829927..10830316,10831996..10832127, 10832653..10832775,10834227..10834390,10840282..10840474, 10840932..10841104,10841625..10841731,10842105..10842346, 10845562..10845754,10847898..10848211,10851481..10851601, 10852800..>10853029)) /locus_tag="PAL_GLEAN10016124" /product="Acyl-CoA synthetase family member 4" CDS complement(join(10829927..10830316,10831996..10832127, 10832653..10832775,10834227..10834390,10840282..10840474, 10840932..10841104,10841625..10841731,10842105..10842346, 10845562..10845754,10847898..10848211,10851481..10851601, 10852800..10853029)) /locus_tag="PAL_GLEAN10016124" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Acyl-CoA synthetase family member 4" /protein_id="ELK03685.1" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR011047" /db_xref="InterPro:IPR018391" /db_xref="UniProtKB/Swiss-Prot:Q4L235" /translation="MTLQELVHQAASIYSDKIAVCFDECNDQSPIYYTYKTLLNTASE LSDFLLLHCDFQEIREIGLYCHPGINLPSWILGILQVPAAYAPVDPDASPALSTHFMK KCDLKYILVEKRQINKFRSSYETLLNYDTFTVEHNDLVLFRLYWKNVEVSLMLNDRKE KYEKVTDGTSSENSKEEKSEEHMDVRLKHCLAYVLHTSGTTGIPKIVRVPHACIVPNI QHFRVLFEITQEDVVFLASPLTFDPSVVEIFVALSSGASLLIVPTSVKVLPSKLAAVL FSHHRVTILQATPTLLRRFGSQLIKSTVLSASTSLRVLALGGETFPSLTILKSWRELG NRTQIFNVYGITEVSSWATFYRIPEKVLNSTLKCELPVQLGFPLHGTVVEVRDTDGFT IEEGNGQVFLGGRNRVCFLDGEMTVPLGTMRATGDFVTVKNGEMFFLGRKDSQIKRHG KRLNIDLVQQVAEGLRQVESCAVTWYNQEKLILFLVSKKELVKDYIFKELEKHLPNYA IPDELVLIDSLPFTSHGCYNGLIYVLKSHNGEKYWMFTTENAVKSSATVDPTTGLLYI GSHDQHAYALDIYKKKCVWKLKCGGTIFSSPCLSLIPHHLYFATLGGLLLAVHPATGN RVWKHSCGKPLFSSPRCCLQFVCIGCVDGNLLCFTHFGEQVWQFSTNEPIFSSPCTST SEQEIFFGSHDCFIYCCSMKGHLQWKFKTTSRVYSTPFAFHNHNRSNEMLLAAASTDG KLWILESKSGQLQTVYELPGEVFSSPVVWESMLIIGCRNNYVYCLDLLGGNKK" assembly_gap 10837721..10839616 /estimated_length=1896 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10865501..>10896808) /locus_tag="PAL_GLEAN10016125" mRNA complement(join(<10865501..10865694,10866783..10866903, 10868573..10868794,10869757..10869884,10870220..10870371, 10870922..10870994,10871488..10871633,10873104..10873176, 10873670..10873815,10873914..10874026,10875768..10875974, 10876605..10876671,10896681..>10896808)) /locus_tag="PAL_GLEAN10016125" /product="Amidophosphoribosyltransferase" CDS complement(join(10865501..10865694,10866783..10866903, 10868573..10868794,10869757..10869884,10870220..10870371, 10870922..10870994,10871488..10871633,10873104..10873176, 10873670..10873815,10873914..10874026,10875768..10875974, 10876605..10876671,10896681..10896808)) /locus_tag="PAL_GLEAN10016125" /note="GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0009116 - nucleoside metabolic process [Evidence IEA]" /codon_start=1 /product="Amidophosphoribosyltransferase" /protein_id="ELK03686.1" /db_xref="InterPro:IPR000583" /db_xref="InterPro:IPR000836" /db_xref="InterPro:IPR017932" /db_xref="UniProtKB/Swiss-Prot:Q06203" /translation="MELEELGIREECGVFGCISSGEWPTQLDVPHVITLGLVGLQHRG QESAGIVTSDGNPVPTFRTHKGMGLINHVFTEDNLKKLYTSNLGIGHTRYATTGNCEL ENCQPFVVETLHGKIAVAHNGELVNATRLRKKLLRHGIGLSTSSDSEMITQLLAYTPP QEQDDTPDWVARIKNLMKEAPTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDIN DKEKKSLETEGWVVSSESCSFLSIGARIKNLMKEAPTAYSLLIMHRDVIYAVRDPYGN RPLCIGRLIPVSDINDKEKKSLETEGWVVSSESCSFLSIGARYYREVLPGEIVEISRH NIQTLDIIPRSEGNPMAFCIFEYVYFARPDSIFEDQMVYTVRYRCGQQLAIEAPVDAD LVSTVPESATPAALGYAGKCGLPYVEVLCKNRYVGRTFIQPNMRLRQLGVAKKFGVLS DNFKGKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASPPIKYPCFMGINIPTK EELIANKPEFEHLAEYLGANSVVYLSVEGLVSSVQGITFKKQKVKKQDIMIQENGNGL ECFEKSGHCTACLTGKYPVELDW" gene <10901495..>10912642 /locus_tag="PAL_GLEAN10016127" mRNA join(<10901495..10901702,10903705..10903883, 10906361..10906540,10906640..10906753,10907447..10907530, 10908406..10908586,10909720..10909878,10912479..>10912642) /locus_tag="PAL_GLEAN10016127" /product="Multifunctional protein ADE2" CDS join(<10901495..10901702,10903705..10903883, 10906361..10906540,10906640..10906753,10907447..10907530, 10908406..10908586,10909720..10909878,10912479..10912642) /locus_tag="PAL_GLEAN10016127" /note="GO_function: GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]; GO_function: GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]; GO_process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]; GO_process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]" /codon_start=1 /product="Multifunctional protein ADE2" /protein_id="ELK03687.1" /db_xref="InterPro:IPR000031" /db_xref="InterPro:IPR001636" /db_xref="UniProtKB/Swiss-Prot:P22234" /translation="ISTVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAAR KNHLEGKAAISNQITSCIFQLLQEAGIKTAFTKKCGETAFIAPKCEMIPIEWVCRRIA TGSFLKRNPGVKEGYKFYPPKVEMFFKDDANNDPQWSEEQLIAAKFCFAGLVIGQTEV DIMSHATQAIFEILEKSWLPQDCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSG DRSQQKDKQSYRDLKLVTPEGLQMVKKNFEWVAEKVELLLKPESQCRVVVMMGSTSDL SHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLG PVMSGNTAYPVISCPPLTPDWGAQDVWSSLRLPSGLGSSTILSPEGSAQFAAQIFGLN NHLVWAKLRASILNTWISLKQADKKIREGN" gene <10918906..>10944651 /locus_tag="PAL_GLEAN10016128" mRNA join(<10918906..10919014,10920846..10920966, 10922621..10922744,10924010..10924153,10924234..10924345, 10925901..10925932,10927181..10927305,10927400..10927457, 10931800..10931931,10932800..10932928,10933715..10933787, 10935318..10935382,10936747..10936842,10937996..10938099, 10938236..10938313,10939094..10939231,10941032..10941069, 10943680..10943839,10944474..>10944651) /locus_tag="PAL_GLEAN10016128" /product="Signal recognition particle 72 kDa protein" CDS join(10918906..10919014,10920846..10920966, 10922621..10922744,10924010..10924153,10924234..10924345, 10925901..10925932,10927181..10927305,10927400..10927457, 10931800..10931931,10932800..10932928,10933715..10933787, 10935318..10935382,10936747..10936842,10937996..10938099, 10938236..10938313,10939094..10939231,10941032..10941069, 10943680..10943839,10944474..10944651) /locus_tag="PAL_GLEAN10016128" /note="GO_component: GO:0048500 - signal recognition particle [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008312 - 7S RNA binding [Evidence IEA]; GO_process: GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]" /codon_start=1 /product="Signal recognition particle 72 kDa protein" /protein_id="ELK03688.1" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR013699" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:P33731" /translation="MASGGSGGVSVPALWSEVNRYGQNGDFTRALKTVNKILQINKDD VTALHCKVVCLIQNGSFKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIENALKTIE SANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSN WEKVVPENLGLQEGTHELCYNAACALIGQGQLNQAMKILQKAEDLCRRSLSEDSDGTE EDPQAELAIIHGQMAYILQLQGCTEEALQLYNQIIKLKPTDVGLLAVIANNIITINKD QNVFDSKKKVKLTNAEGVEFKLSKKQLQAIEFNKALLAMYTNQAEQCRKISASLQSQS PEHLLPVLIQAAQLCREKQHAKAIELLQEFSDQHPENAAEIKLTMAQLKISQGNISKA CLILRSIEELKHKPGMVSALVTMYSHEEDIDSAIEVFTQAIQWYQSHQPKSPAHFSLI REAANFKLKYGRKKEAISDLEQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPS SDSMSLKVDVEALENSPGATYIRKKGGKVAGDSQPKEQGQGDLKKKKKKKKGKLPKNY DPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSSPPT SPRPGSAATASASTSNIIPPRHQKPAGAPATKKKQQQKKKKGGKGGW" assembly_gap 10946933..10946982 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10947856..>10959146 /locus_tag="PAL_GLEAN10016129" mRNA join(<10947856..10948134,10950990..10951152, 10956965..10957140,10958967..>10959146) /locus_tag="PAL_GLEAN10016129" /product="ADP-ribosylation factor-like protein 9" CDS join(10947856..10948134,10950990..10951152, 10956965..10957140,10958967..10959146) /locus_tag="PAL_GLEAN10016129" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]" /codon_start=1 /product="ADP-ribosylation factor-like protein 9" /protein_id="ELK03689.1" /db_xref="InterPro:IPR006687" /db_xref="InterPro:IPR006688" /db_xref="InterPro:IPR006689" /db_xref="UniProtKB/Swiss-Prot:Q6T311" /translation="MERVKTKKKEKGKEPEKEKIREKGKEEKEKKKEVEKEKNKEKEK EKGREEKSKNKEEEKRKERETEKEKEQLKGKEEKEDNNSLLAKPLLEPREKNKQILVL GLDGAGKTSVLHSLALNRVQHSEAPTQGFNAVCINTEGSQMEFLEIGGSEPFRSYWDM YLSRGLLLIFVVDSADHGRLPEAKKHLHQLIETNPIIPLVVFANKQDLGAAYHITDIH EALALSEVGNDRKMFLFGTQVTENGSEIPSTMQDAKDLIAHLAADMQ" gene <10976320..>11026141 /locus_tag="PAL_GLEAN10016130" mRNA join(<10976320..10976773,10992038..10992068, 11002140..11002208,11006837..11006965,11010444..11010581, 11015876..11015990,11023511..11023642,11024559..11024734, 11026027..>11026141) /locus_tag="PAL_GLEAN10016130" /product="Testicular haploid expressed protein" CDS join(10976320..10976773,10992038..10992068, 11002140..11002208,11006837..11006965,11010444..11010581, 11015876..11015990,11023511..11023642,11024559..11024734, 11026027..11026141) /locus_tag="PAL_GLEAN10016130" /codon_start=1 /product="Testicular haploid expressed protein" /protein_id="ELK03690.1" /db_xref="InterPro:IPR006623" /db_xref="UniProtKB/Swiss-Prot:Q9JMB1" /translation="MENQEFSGSSELSDGHDTTETSARSEALLTPLVTRIFNVRDKPL EPKKPEEVDDQGQRKIPEPYDHYEPCRPSEPHTPYVLYEPYQSYEITELHASHAARKF LAPCEHHGYHAPRKPHKPHEAELFPSAKVMTSPSLVTRIPPRIPLSTLNDPGPCVFLR KWSESNLTPGAYSNIVSLDTIKELRKLFWGNQDPICPISRSALNAQLTKRLENLAQPK EVSHRYVPNRAQYYYSCGRGSVIWEIPSSALFRKISKRIQKLAQPNRVKKEHVINRSF SDYLKKDSLKISDPSPRILRLSIAKGTDPNYLPPKNIENRVSISAQTAVIAPRIIDLA HPRLKIEGLCYPRETCEKPIHPISQAALFAKPNPRIVALAKAKPLHQDYLPAYDSYRP VSYAAIHSEASPRIQELANPSTRAPVHIVYYDPEVFNVKPAALKAQCSQRIQKLAEPL RR" assembly_gap 10980997..10981697 /estimated_length=701 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10994136..10995719 /estimated_length=1584 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10998621..10999322 /estimated_length=702 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11028559..11032627 /estimated_length=4069 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11047570..11047613 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11050350..11050710 /estimated_length=361 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<11064882..>11071484) /locus_tag="PAL_GLEAN10016131" mRNA complement(join(<11064882..11064959,11071341..>11071484)) /locus_tag="PAL_GLEAN10016131" /product="Homeodomain-only protein" CDS complement(join(11064882..11064959,11071341..11071484)) /locus_tag="PAL_GLEAN10016131" /note="GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Homeodomain-only protein" /protein_id="ELK03691.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR009057" /db_xref="UniProtKB/Swiss-Prot:Q8MJD5" /translation="MSADTASGPTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLSE EETQKWFKQRLAQWRQSEGLPSECRSVTD" assembly_gap 11072915..11073621 /estimated_length=707 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11079590..11079603 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11122019..11122041 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11131463..11131483 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11132518..11132535 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11153461..11154001 /estimated_length=541 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11189773..11189788 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11229830..11229883 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11236437..11236493 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11241894..11242012 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11244941..11245113 /estimated_length=173 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11245495..11245580 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11246889..>11260462 /locus_tag="PAL_GLEAN10016133" mRNA join(<11246889..11247783,11252832..11252915, 11258538..>11260462) /locus_tag="PAL_GLEAN10016133" /product="RE1-silencing transcription factor" CDS join(11246889..11247783,11252832..11252915, 11258538..11260462) /locus_tag="PAL_GLEAN10016133" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="RE1-silencing transcription factor" /protein_id="ELK03692.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:O54963" /translation="MATQVMGQSSGGGGLFSGSGNIGMALPNDMYDLHDLSKAELAAP QLIMLANVALTGEVNGSCCDYLVGEERQMAELMPVGDNNFSDSDEEGLEESPEIKGEP SGLENMGLESLELSVAESQPVFEMSSAPEIYSSNKDLPPETPGAEDKCKNLKTKPFRC KPCQYEAESEEQFVHHIRVHSAKKFFVEESAEKQAKARESGSSTAEEGDFSKGPIRCD RCGYNTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYT CGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCD QCSYVASNQHEVTRHARQVHNGPKPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPV CDYAASKKCNLQYHFKSKHPTCPNKTMDVSKVKLKKTKKREADLPDNNNTNEKTDTEQ TKIKGDVAGKKNEKSVKVEKKDNVSKEKKPCSNASIQVTTRTRRSAMETKAVDVHTGN NSEKTCKTKKSKRKMEADTHSLQDPVHDEDPVTKKKKTESKSKNSQEVPKGENKIEEI KKQNTYVKKSTKKKILKNKSSKKSSKPAQKETAQKASAQSELLPPMEPSHSQMKPALT EPPLPTEPQMRPAQTEPLPLMEPAPMELVQMEEPPTMEPSPPVEPSPIEPPFHMEPIT KKSPRKDNKKEKSNMQSEMARKEQVLIEVGLVPVKDSQLLKESVGAQDLLAPSPPLPK ENLKEEESKDQKLLTQGEENKEAPLQKVEAEEGDKSLVGLAAVIKESANISSSEQNLN IPEGETLDGKLQADTRLCEMDTDTEENKTENTTGKDSAVEEPVSPLLPLPIEKREAGS KTAVASPPITMAINESQEMDEDEGIHSHDGSDLSDNMSEGSDDSGLNGARPVPQETSR KNAKEALAVKVAEGDFVCIFCDRSFRKEKDYSKHLNRHLVNVYFLEKAAKGQE" gene complement(<11277355..>11287560) /locus_tag="PAL_GLEAN10016134" mRNA complement(join(<11277355..11277554,11277868..11277988, 11280860..11280976,11281920..11282051,11284385..11284590, 11285206..11285370,11286411..>11287560)) /locus_tag="PAL_GLEAN10016134" /product="hypothetical protein" CDS complement(join(11277355..11277554,11277868..11277988, 11280860..11280976,11281920..11282051,11284385..11284590, 11285206..11285370,11286411..11287560)) /locus_tag="PAL_GLEAN10016134" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03693.1" /db_xref="UniProtKB/Swiss-Prot:Q32LB9" /translation="MLPARLTRRLLCPLLRGSTPTVAHHGLRELLLERRCAAASSSQH PSGLGRGFLRSPTVTGGYEQRDDMEERFLFPEYVPEPEPAPTLEEQLQELQQQQEEDE RRKQQQREERRQQKVRASRRVHPVVGHPDPTVPPSGLNCSGCGAELHCQDPGVPGYLP SEKFLSAAAQTDAGLARTVCQRCWLLVHHRRALRLQVSREQYLELVSAALRRPGPSLV LYMVDLLDLPDALLPDLPALVGPKQLIVLGNKVDLLPQDAPGYLQRLRERLWDDCVRA GLLRPLGPRGPQHSAGDRPLDREENSNPSARSRTMLRDVRLISAKTGYGVEELISALQ RSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISPWPGTTLNLLKF PICNPTPYRMFERQKRLKKDANEAEEDLSQLEQNQLSLLKKHGYVVGRVGRTFSYSEK QKDEAGFEFDADSLAFDMENEPVVVADKPTKRVELTPQDVKDAHWFYDTPGITKENCV LNLLSEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGNQSAWFTVVASNFL PVHITSLDKADTVYQKHAGHTLLKVPMGGKERMAGFPPLVAEDITLKEGLGESEAVAD IKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLLPHIVNIKGERIKRSVAYKTK KLPSLVYNLRKKKK" gene <11293062..>11330908 /locus_tag="PAL_GLEAN10016135" mRNA join(<11293062..11293132,11296274..11296424, 11299115..11299227,11299351..11299570,11299968..11300126, 11302783..11302947,11305427..11305623,11305781..11305900, 11306703..11306889,11309554..11309697,11309936..11310075, 11310175..11310286,11313609..11313763,11316357..11316555, 11316867..11317035,11322988..11323084,11324065..11324159, 11325187..11325437,11325518..11325607,11325855..11325962, 11326708..11326821,11327226..11327386,11330132..11330327, 11330819..>11330908) /locus_tag="PAL_GLEAN10016135" /product="DNA-directed RNA polymerase II subunit RPB2" CDS join(11293062..11293132,11296274..11296424, 11299115..11299227,11299351..11299570,11299968..11300126, 11302783..11302947,11305427..11305623,11305781..11305900, 11306703..11306889,11309554..11309697,11309936..11310075, 11310175..11310286,11313609..11313763,11316357..11316555, 11316867..11317035,11322988..11323084,11324065..11324159, 11325187..11325437,11325518..11325607,11325855..11325962, 11326708..11326821,11327226..11327386,11330132..11330327, 11330819..11330908) /locus_tag="PAL_GLEAN10016135" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO_process: GO:0006350 - transcription [Evidence IEA]" /codon_start=1 /product="DNA-directed RNA polymerase II subunit RPB2" /protein_id="ELK03694.1" /db_xref="InterPro:IPR007120" /db_xref="InterPro:IPR007641" /db_xref="InterPro:IPR007642" /db_xref="InterPro:IPR007644" /db_xref="InterPro:IPR007645" /db_xref="InterPro:IPR007646" /db_xref="InterPro:IPR007647" /db_xref="UniProtKB/Swiss-Prot:P30876" /translation="MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFI QMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMM PNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLT DRDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCL ENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRD ILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKE VLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPL LAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAINTKIISDGLKYSLATGNWGDQK KAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETP EGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCW VGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQ KLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAY CSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTL AHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGF FRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGD DVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKI RVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIG HLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKI TSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQI AHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPY ACKLLFQELMSMSIAPRMMSV" gene complement(<11331237..>11399499) /locus_tag="PAL_GLEAN10016136" mRNA complement(join(<11331237..11331256,11332345..11332471, 11333326..11333442,11341594..11341703, 11399277..>11399499)) /locus_tag="PAL_GLEAN10016136" /product="Insulin-like growth factor-binding protein 7" CDS complement(join(11331237..11331256,11332345..11332471, 11333326..11333442,11341594..11341703,11399277..11399499)) /locus_tag="PAL_GLEAN10016136" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Insulin-like growth factor-binding protein 7" /protein_id="ELK03695.1" /db_xref="InterPro:IPR002350" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR011497" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:Q16270" /translation="MECVKSRKRRKGKAGAAAGGPGVSGVCVCKTRYPVCGSDGVTYP SGCQLRAASLRAESRGEKAITQVSKGTCEQGPSIVTAPKDIWNVTGAQVYLSCEVIGI PTPVLIWNKIKRGHYGVQRTELLPGDRDNLAIQTRGGPEKHEVTGWVLVSPLSKEDAG EYECHASNSQGQASASAKITVVDALHEIPVNKGEGTEL" assembly_gap 11370941..11370979 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11378400..11378954 /estimated_length=555 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11398572..11398602 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11399546..11399945 /estimated_length=400 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11417207..11417261 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11451759..11451802 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11453313..11453906 /estimated_length=594 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11456873..11456893 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11457969..11457991 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11501833..11502056 /estimated_length=224 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11507449..11507485 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11509848..11511133 /estimated_length=1286 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11519700..11519726 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11520939..11524159 /estimated_length=3221 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11532701..11532756 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11619318..11619737 /estimated_length=420 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11654434..11654524 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11662243..11662351 /estimated_length=109 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11699344..11699431 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11726107..11726179 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11734388..11734744 /estimated_length=357 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11751116..11751175 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11834659..11834683 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11887413..11888287 /estimated_length=875 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11897522..11897616 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11899988..11900033 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11909074..11909095 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11918234..11918261 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11923768..11927011 /estimated_length=3244 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11937041..11937085 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11945943..11947560 /estimated_length=1618 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11958247..11959279 /estimated_length=1033 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11978701..11978713 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12027127..12027154 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12057670..12057761 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12079623..12080538 /estimated_length=916 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12084101..12084119 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12141409..12141527 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12176825..12177214 /estimated_length=390 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12212642..12212667 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12213256..12213266 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12213979..12213998 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12223021..12223044 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12254259..12254333 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12264937..12265768 /estimated_length=832 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12274601..12274610 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12275452..12275489 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12301506..12301635 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12303971..12304399 /estimated_length=429 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12351780..12351808 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12358855..12359036 /estimated_length=182 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12367450..12367520 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12386373..12386436 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12399699..12399737 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12410291..12410523 /estimated_length=233 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12440505..12440531 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12471244..12472206 /estimated_length=963 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12506633..12506662 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12523193..12523226 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12543836..12543864 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12569137..12569232 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12588183..12589115 /estimated_length=933 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12592903..12592936 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12597153..12597192 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12622075..12622171 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12625376..12625423 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12632314..12633318 /estimated_length=1005 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12660772..12660943 /estimated_length=172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12782972..12783002 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12817305..12820758 /estimated_length=3454 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12845335..12845426 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12859263..12859315 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12881519..12881550 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12894041..>12894310 /locus_tag="PAL_GLEAN10016140" mRNA <12894041..>12894310 /locus_tag="PAL_GLEAN10016140" /product="60S ribosomal protein L27a" CDS 12894041..12894310 /locus_tag="PAL_GLEAN10016140" /codon_start=1 /product="60S ribosomal protein L27a" /protein_id="ELK03696.1" /db_xref="InterPro:IPR021131" /db_xref="UniProtKB/Swiss-Prot:Q5R1X0" /translation="MATAAGKHRKHLEARVMLVACITTELLRQTSPSHSGSFGKVGMK LYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGNAPIIDVV" assembly_gap 12910914..12910955 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12917017..12917071 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12956566..12956602 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12987576..12988741 /estimated_length=1166 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12999594..12999617 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13034461..13034499 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13171153..13171195 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13177042..13177085 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13245025..13245048 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13279869..13279906 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13287372..13287413 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13312788..13312850 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13313571..13313611 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13356058..13356073 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13362479..13362546 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13397611..13399684 /estimated_length=2074 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13415936..13415957 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13437168..13437217 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13499726..13499763 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13513306..13513321 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13515273..13515868 /estimated_length=596 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13562692..13562742 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13567765..13567787 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13568412..13568434 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13592166..13593999 /estimated_length=1834 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13612444..13612893 /estimated_length=450 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13624469..13624811 /estimated_length=343 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13658999..13659167 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13726135..13726230 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13739361..13739497 /estimated_length=137 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13756912..13756946 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13766869..13766893 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13865639..13865665 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13889144..13889221 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13949281..13949406 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13952343..13953501 /estimated_length=1159 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14019883..14019894 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14042614..14043169 /estimated_length=556 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14082014..14082068 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14109672..14109751 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14166420..14166433 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14247771..14247801 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14251344..14253317 /estimated_length=1974 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14261078..14261095 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14298781..14299894 /estimated_length=1114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14306935..14306987 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14338529..14338834 /estimated_length=306 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14341538..14342132 /estimated_length=595 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14348456..14348602 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14375911..14378486 /estimated_length=2576 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14385312..14385352 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14422328..14423218 /estimated_length=891 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14448034..14448079 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14470894..14470915 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14534055..14534074 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14540585..14540743 /estimated_length=159 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14589360..14589371 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14612135..14612158 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14638224..14638252 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14649626..14649745 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14654500..14654541 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14662471..14662484 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14663724..14663744 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14840712..14841161 /estimated_length=450 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14850210..14850235 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14865709..>14868571 /locus_tag="PAL_GLEAN10016141" mRNA join(<14865709..14865912,14868521..>14868571) /locus_tag="PAL_GLEAN10016141" /product="hypothetical protein" CDS join(14865709..14865912,14868521..14868571) /locus_tag="PAL_GLEAN10016141" /codon_start=1 /product="hypothetical protein" /protein_id="ELK03697.1" /db_xref="UniProtKB/Swiss-Prot:Q96N11" /translation="MIDIQPLLLRCDMLSAAQEALYHPGISFSSQPQSVPLLIVDKGP VELPEEFVVQVPKEPRSQPKVRLAIAKQASRNPTKIAITT" assembly_gap 14873971..14874014 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14898900..14898923 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14921150..14921160 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14925299..14926935 /estimated_length=1637 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14929638..>15051049 /locus_tag="PAL_GLEAN10016142" mRNA join(<14929638..14929828,15004813..15004922, 15050088..>15051049) /locus_tag="PAL_GLEAN10016142" /product="Latrophilin-3" CDS join(14929638..14929828,15004813..15004922, 15050088..15051049) /locus_tag="PAL_GLEAN10016142" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005529 - sugar binding [Evidence IEA]" /codon_start=1 /product="Latrophilin-3" /protein_id="ELK03698.1" /db_xref="InterPro:IPR000922" /db_xref="InterPro:IPR003112" /db_xref="InterPro:IPR003924" /db_xref="UniProtKB/Swiss-Prot:Q9HAR2" /translation="MAVVRRELSCESYPIELRCPGTDVIMIESANYGRTDDKICDSDP AQMENIRCYLPDAYKIMSQRCNNRTQCAVVAGPDVFPDPCPGTYKYLEVQYECVPYIF LCPGLLKGVYQSEHLFESDHQSGAWCKDPLQASDKIYYMPWTPYRTDTLTEYSSKDDF IAGRPTTTYKLPHRVDGTGFVVYDGALFFNKERTRNIVKFDLRTRIKSGEAIIANANY HDTSPYRWGGKSDIDLAVDENGLWVIYATEQNNGKIVISQLNPYTLRIEGTWDTAYDK RSASNAFMICGILYVVKSVYEDDDNEATGNKIDYIYNTDQSKDSLVDVPFPNSYQYIA AVDYNPRDNLLYVWNNYHVVKYSLDFGPLDSRSGKFDFWWFLRGKIFSLFSVNLLNIL IGRAYVPEKCFIVFSSEKVLLFINHVQL" assembly_gap 14986430..14986459 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15010133..15010171 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15086458..15087482 /estimated_length=1025 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15104346..15104360 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15108113..15108156 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15165146..15165187 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15168841..>15310840 /locus_tag="PAL_GLEAN10016143" mRNA join(<15168841..15169117,15171137..15171240, 15177391..15177501,15180604..15180642,15201360..15201543, 15202438..15202560,15207515..15207723,15211628..15211804, 15230376..15230585,15232999..15233219,15243984..15244050, 15278928..15279053,15284841..15284937,15310041..>15310840) /locus_tag="PAL_GLEAN10016143" /product="Latrophilin-3" CDS join(15168841..15169117,15171137..15171240, 15177391..15177501,15180604..15180642,15201360..15201543, 15202438..15202560,15207515..15207723,15211628..15211804, 15230376..15230585,15232999..15233219,15243984..15244050, 15278928..15279053,15284841..15284937,15310041..15310840) /locus_tag="PAL_GLEAN10016143" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004888 - transmembrane receptor activity [Evidence IEA]; GO_function: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO_process: GO:0007166 - cell surface receptor linked signaling pathway [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO_process: GO:0007218 - neuropeptide signaling pathway [Evidence IEA]" /codon_start=1 /product="Latrophilin-3" /protein_id="ELK03699.1" /db_xref="InterPro:IPR000203" /db_xref="InterPro:IPR000832" /db_xref="InterPro:IPR001879" /db_xref="InterPro:IPR003334" /db_xref="InterPro:IPR017981" /db_xref="InterPro:IPR022624" /db_xref="UniProtKB/Swiss-Prot:O97827" /translation="MGSTTTSTTLRTTTGSTGRSTTPSVSGRKNWSTSTPSPAVEVLD DITTHLPSASSQIPALEESCDAVEAREIMWFKTRQGQMAKQPCPTGTIGVSTYLCLAP DGIWDPQGPDLSNCSSPWVNHITQKLKSGETAANIARELAEQTRNHLNAGDITYSVRA MDQLLQKRERSCRAYVQAMVETVNNLLQPQALNAWRDLTTSDQLRAATMLLDTVEESA FVLADNLLKTDIVRENTDNIQLEVARLSTEGNLEDLKFPETMGHGSTIQLSANTLKQN GRNGEIRVAFVLYNNLGPYLSTENASMKLGTEAMSTNHSVIVNSPVITAAINKEFSNK VYLADPVVFTVKHIKQSEENFNPNCSFWSYSKRTMTGYWSTQGCRLLTTNKTHTTCSC NHLTNFAVLMAHVEVKHSDAVHDLLLDVITWVGILLSLVCLLICIFTFCFFRGLQSDR NTIHKNLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLEGVQLYI MLVEVFESEHSRRKYFYLVGYGMPALIVAVSAAVDYRSYGTDKVCWLRLDTYFIWSFI GPATLIIMVRKEYGKCLRTHCCSGKSTESSIGSGKTSGSRTPGRYSTGSQSRIRRMWN DTVRKQSESSFITGDINSSASLNREGLLNNARDTSVMDTLPLNGNHGNSYSIASGEYL SNCVQILDRGYNHNETTLEKKILKELTSNYIPSYLNNHERSSEQNRNLMNKLVNNLGG GSEDDAIVLDDATSFNHEESLGLELIHEESDAPLLPPRVYSTENHQPHHYTRRRIPQD HSESFFPLLTNEHTEDLQSPHRDSLYTSMPALAGVPAAESVTTSTQTEPPPAKCGDAE DVYYKSMPNLGSRNHIHPLHTYYQLGRGSSDGFIVPPNKEGTPPEGSVKGPAHLVTSL " assembly_gap 15177986..15178055 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15206140..15206244 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15210549..15210715 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15215017..15215059 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15225552..15225591 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15245869..15245884 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15269513..15269590 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15270195..15270223 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15311319..15311389 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15321173..15322269 /estimated_length=1097 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15326896..15326918 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15385914..15386017 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15411064..15411094 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15454919..15455079 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15467450..15467464 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15477039..15477106 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15483245..15486683 /estimated_length=3439 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15487990..15488767 /estimated_length=778 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15512546..15512794 /estimated_length=249 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15528533..15528966 /estimated_length=434 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15534640..15534687 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15536222..15536265 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15551900..15554761 /estimated_length=2862 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15567962..15567980 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15572096..15572136 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15591887..15591921 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15611893..15611982 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15625157..15625174 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15655897..15655972 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15659355..15661434 /estimated_length=2080 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15662017..15662049 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15793647..15794507 /estimated_length=861 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15795183..15795925 /estimated_length=743 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15801890..15804382 /estimated_length=2493 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15856039..15856086 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15874220..15874285 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15891990..15894459 /estimated_length=2470 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15946706..15948202 /estimated_length=1497 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(ALWS01099981.1:1..750,gap(548),ALWS01099982.1:1..5364, gap(1317),ALWS01099983.1:1..2449,gap(135),ALWS01099984.1:1..6466, gap(30),ALWS01099985.1:1..22929,gap(628),ALWS01099986.1:1..8474, gap(3064),ALWS01099987.1:1..28933,gap(35),ALWS01099988.1:1..13666, gap(1136),ALWS01099989.1:1..4914,gap(48),ALWS01099990.1:1..13448, gap(68),ALWS01099991.1:1..73276,gap(1690),ALWS01099992.1:1..5767, gap(71),ALWS01099993.1:1..11432,gap(46),ALWS01099994.1:1..4697, gap(648),ALWS01099995.1:1..5815,gap(17),ALWS01099996.1:1..15011, gap(31),ALWS01099997.1:1..6595,gap(227),ALWS01099998.1:1..50618, gap(2211),ALWS01099999.1:1..4120,gap(442),ALWS01100000.1:1..29322, gap(66),ALWS01100001.1:1..56891,gap(25),ALWS01100002.1:1..9699, gap(176),ALWS01100003.1:1..54234,gap(11),ALWS01100004.1:1..6524, gap(152),ALWS01100005.1:1..1925,gap(119),ALWS01100006.1:1..675, gap(39),ALWS01100007.1:1..28877,gap(46),ALWS01100008.1:1..19448, gap(67),ALWS01100009.1:1..4015,gap(41),ALWS01100010.1:1..6416, gap(41),ALWS01100011.1:1..2619,gap(13),ALWS01100012.1:1..7492, gap(323),ALWS01100013.1:1..1432,gap(761),ALWS01100014.1:1..14842, gap(10),ALWS01100015.1:1..17747,gap(62),ALWS01100016.1:1..14009, gap(1283),ALWS01100017.1:1..19872,gap(21),ALWS01100018.1:1..14105, gap(2562),ALWS01100019.1:1..7750,gap(1937),ALWS01100020.1:1..45296, gap(71),ALWS01100021.1:1..2143,gap(84),ALWS01100022.1:1..20944, gap(78),ALWS01100023.1:1..5850,gap(88),ALWS01100024.1:1..27185, gap(12),ALWS01100025.1:1..1091,gap(123),ALWS01100026.1:1..5398, gap(143),ALWS01100027.1:1..2325,gap(184),ALWS01100028.1:1..6658, gap(3894),ALWS01100029.1:1..9266,gap(15),ALWS01100030.1:1..2947, gap(51),ALWS01100031.1:1..529,gap(54),ALWS01100032.1:1..44528, gap(15),ALWS01100033.1:1..17356,gap(28),ALWS01100034.1:1..7340, gap(56),ALWS01100035.1:1..10996,gap(51),ALWS01100036.1:1..20118, gap(24),ALWS01100037.1:1..11127,gap(98),ALWS01100038.1:1..18067, gap(27),ALWS01100039.1:1..19812,gap(34),ALWS01100040.1:1..25133, gap(25),ALWS01100041.1:1..19795,gap(125),ALWS01100042.1:1..1274, gap(46),ALWS01100043.1:1..21194,gap(218),ALWS01100044.1:1..49128, gap(17),ALWS01100045.1:1..3675,gap(4256),ALWS01100046.1:1..11936, gap(160),ALWS01100047.1:1..2010,gap(30),ALWS01100048.1:1..22024, gap(366),ALWS01100049.1:1..16709,gap(85),ALWS01100050.1:1..30115, gap(40),ALWS01100051.1:1..3280,gap(4916),ALWS01100052.1:1..19562, gap(61),ALWS01100053.1:1..27755,gap(1092),ALWS01100054.1:1..6903, gap(136),ALWS01100055.1:1..9613,gap(61),ALWS01100056.1:1..8218, gap(32),ALWS01100057.1:1..23767,gap(29),ALWS01100058.1:1..9131, gap(2182),ALWS01100059.1:1..53679,gap(1101), ALWS01100060.1:1..32869,gap(62),ALWS01100061.1:1..41035,gap(14), ALWS01100062.1:1..2704,gap(38),ALWS01100063.1:1..38569,gap(101), ALWS01100064.1:1..32303,gap(112),ALWS01100065.1:1..14414,gap(2954), ALWS01100066.1:1..21210,gap(23),ALWS01100067.1:1..9400,gap(19), ALWS01100068.1:1..2327,gap(1276),ALWS01100069.1:1..18062,gap(22), ALWS01100070.1:1..3498,gap(799),ALWS01100071.1:1..13271,gap(290), ALWS01100072.1:1..349,gap(1855),ALWS01100073.1:1..13636,gap(1735), ALWS01100074.1:1..23857,gap(243),ALWS01100075.1:1..123853,gap(614), ALWS01100076.1:1..22691,gap(32),ALWS01100077.1:1..7265,gap(18), ALWS01100078.1:1..5970,gap(32),ALWS01100079.1:1..44391,gap(2381), ALWS01100080.1:1..102514,gap(50),ALWS01100081.1:1..2121,gap(65), ALWS01100082.1:1..40878,gap(2925),ALWS01100083.1:1..30094,gap(306), ALWS01100084.1:1..7130,gap(176),ALWS01100085.1:1..1327,gap(32), ALWS01100086.1:1..50169,gap(16),ALWS01100087.1:1..4552,gap(27), ALWS01100088.1:1..7063,gap(71),ALWS01100089.1:1..902,gap(48), ALWS01100090.1:1..24872,gap(26),ALWS01100091.1:1..7320,gap(3778), ALWS01100092.1:1..34116,gap(19),ALWS01100093.1:1..40954,gap(56), ALWS01100094.1:1..37159,gap(520),ALWS01100095.1:1..3009,gap(52), ALWS01100096.1:1..20340,gap(90),ALWS01100097.1:1..1196,gap(3090), ALWS01100098.1:1..5975,gap(112),ALWS01100099.1:1..8063,gap(1245), ALWS01100100.1:1..21070,gap(1069),ALWS01100101.1:1..7239,gap(18), ALWS01100102.1:1..17733,gap(113),ALWS01100103.1:1..18337,gap(38), ALWS01100104.1:1..112605,gap(15),ALWS01100105.1:1..13194,gap(1082), ALWS01100106.1:1..19566,gap(25),ALWS01100107.1:1..8633,gap(26), ALWS01100108.1:1..17892,gap(33),ALWS01100109.1:1..37436,gap(34), ALWS01100110.1:1..35893,gap(1112),ALWS01100111.1:1..117986, gap(598),ALWS01100112.1:1..15410,gap(125),ALWS01100113.1:1..45790, gap(275),ALWS01100114.1:1..13454,gap(1392),ALWS01100115.1:1..11589, gap(54),ALWS01100116.1:1..9744,gap(4332),ALWS01100117.1:1..11593, gap(1346),ALWS01100118.1:1..6706,gap(69),ALWS01100119.1:1..88628, gap(14),ALWS01100120.1:1..1209,gap(35),ALWS01100121.1:1..15994, gap(66),ALWS01100122.1:1..11471,gap(49),ALWS01100123.1:1..58636, gap(27),ALWS01100124.1:1..48814,gap(889),ALWS01100125.1:1..2688, gap(12),ALWS01100126.1:1..3790,gap(2569),ALWS01100127.1:1..14419, gap(2939),ALWS01100128.1:1..19725,gap(2371), ALWS01100129.1:1..40398,gap(38),ALWS01100130.1:1..2661,gap(57), ALWS01100131.1:1..7022,gap(119),ALWS01100132.1:1..44212,gap(35), ALWS01100133.1:1..20761,gap(72),ALWS01100134.1:1..3737,gap(29), ALWS01100135.1:1..2418,gap(30),ALWS01100136.1:1..63987,gap(179), ALWS01100137.1:1..2770,gap(169),ALWS01100138.1:1..676,gap(3169), ALWS01100139.1:1..9242,gap(1566),ALWS01100140.1:1..11179,gap(52), ALWS01100141.1:1..42255,gap(10),ALWS01100142.1:1..11745,gap(43), ALWS01100143.1:1..8482,gap(24),ALWS01100144.1:1..76360,gap(71), ALWS01100145.1:1..3998,gap(10),ALWS01100146.1:1..12762,gap(329), ALWS01100147.1:1..4039,gap(50),ALWS01100148.1:1..15859,gap(18), ALWS01100149.1:1..3359,gap(608),ALWS01100150.1:1..11317,gap(228), ALWS01100151.1:1..10970,gap(1204),ALWS01100152.1:1..22725,gap(32), ALWS01100153.1:1..2138,gap(2871),ALWS01100154.1:1..50458,gap(14), ALWS01100155.1:1..41178,gap(49),ALWS01100156.1:1..43297,gap(58), ALWS01100157.1:1..32035,gap(30),ALWS01100158.1:1..5285,gap(18), ALWS01100159.1:1..33989,gap(75),ALWS01100160.1:1..11358,gap(147), ALWS01100161.1:1..115629,gap(22),ALWS01100162.1:1..6826,gap(33), ALWS01100163.1:1..16471,gap(60),ALWS01100164.1:1..43141,gap(39), ALWS01100165.1:1..11171,gap(50),ALWS01100166.1:1..8834,gap(296), ALWS01100167.1:1..20451,gap(51),ALWS01100168.1:1..14169,gap(1033), ALWS01100169.1:1..1736,gap(22),ALWS01100170.1:1..9729,gap(160), ALWS01100171.1:1..3491,gap(38),ALWS01100172.1:1..4004,gap(54), ALWS01100173.1:1..7074,gap(580),ALWS01100174.1:1..7307,gap(24), ALWS01100175.1:1..2590,gap(24),ALWS01100176.1:1..4759,gap(17), ALWS01100177.1:1..8703,gap(23),ALWS01100178.1:1..26077,gap(1302), ALWS01100179.1:1..6689,gap(36),ALWS01100180.1:1..13074,gap(579), ALWS01100181.1:1..20439,gap(37),ALWS01100182.1:1..16670,gap(161), ALWS01100183.1:1..51156,gap(52),ALWS01100184.1:1..43852,gap(28), ALWS01100185.1:1..37403,gap(24),ALWS01100186.1:1..5046,gap(104), ALWS01100187.1:1..2969,gap(2353),ALWS01100188.1:1..4774,gap(45), ALWS01100189.1:1..53488,gap(920),ALWS01100190.1:1..69137,gap(274), ALWS01100191.1:1..18622,gap(89),ALWS01100192.1:1..5549,gap(35), ALWS01100193.1:1..3072,gap(1443),ALWS01100194.1:1..25704,gap(15), ALWS01100195.1:1..3450,gap(47),ALWS01100196.1:1..8715,gap(40), ALWS01100197.1:1..8557,gap(33),ALWS01100198.1:1..61741,gap(988), ALWS01100199.1:1..13390,gap(232),ALWS01100200.1:1..29221,gap(15), ALWS01100201.1:1..24009,gap(39),ALWS01100202.1:1..6844,gap(563), ALWS01100203.1:1..4970,gap(44),ALWS01100204.1:1..62816,gap(201), ALWS01100205.1:1..20968,gap(1514),ALWS01100206.1:1..36389,gap(104), ALWS01100207.1:1..12161,gap(31),ALWS01100208.1:1..165830,gap(11), ALWS01100209.1:1..6420,gap(49),ALWS01100210.1:1..99371,gap(236), ALWS01100211.1:1..30662,gap(364),ALWS01100212.1:1..40898,gap(109), ALWS01100213.1:1..95413,gap(90),ALWS01100214.1:1..18715,gap(36), ALWS01100215.1:1..168950,gap(135),ALWS01100216.1:1..1029,gap(49), ALWS01100217.1:1..6123,gap(314),ALWS01100218.1:1..38348,gap(293), ALWS01100219.1:1..957,gap(164),ALWS01100220.1:1..30260,gap(32), ALWS01100221.1:1..33564,gap(34),ALWS01100222.1:1..1088,gap(169), ALWS01100223.1:1..26819,gap(29),ALWS01100224.1:1..11433,gap(3756), ALWS01100225.1:1..3502,gap(420),ALWS01100226.1:1..7082,gap(659), ALWS01100227.1:1..3381,gap(50),ALWS01100228.1:1..30859,gap(112), ALWS01100229.1:1..10444,gap(2047),ALWS01100230.1:1..1478,gap(373), ALWS01100231.1:1..11205,gap(16),ALWS01100232.1:1..2081,gap(23), ALWS01100233.1:1..28749,gap(10),ALWS01100234.1:1..27821,gap(35), ALWS01100235.1:1..33885,gap(9219),ALWS01100236.1:1..45044,gap(15), ALWS01100237.1:1..2565,gap(28),ALWS01100238.1:1..26812,gap(112), ALWS01100239.1:1..44237,gap(2462),ALWS01100240.1:1..1197,gap(42), ALWS01100241.1:1..21205,gap(35),ALWS01100242.1:1..13923,gap(10), ALWS01100243.1:1..40813,gap(10),ALWS01100244.1:1..44866,gap(93), ALWS01100245.1:1..7936,gap(2503),ALWS01100246.1:1..3159,gap(51), ALWS01100247.1:1..4245,gap(37),ALWS01100248.1:1..5855,gap(21), ALWS01100249.1:1..12805,gap(31),ALWS01100250.1:1..7211,gap(18), ALWS01100251.1:1..7691,gap(1260),ALWS01100252.1:1..6369,gap(169), ALWS01100253.1:1..10893,gap(27),ALWS01100254.1:1..10771,gap(40), ALWS01100255.1:1..1615,gap(103),ALWS01100256.1:1..10752,gap(140), ALWS01100257.1:1..39171,gap(257),ALWS01100258.1:1..75226,gap(159), ALWS01100259.1:1..64633,gap(19),ALWS01100260.1:1..18760,gap(260), ALWS01100261.1:1..10323,gap(1298),ALWS01100262.1:1..16363,gap(66), ALWS01100263.1:1..49807,gap(927),ALWS01100264.1:1..35133,gap(13), ALWS01100265.1:1..21286,gap(44),ALWS01100266.1:1..6090,gap(200), ALWS01100267.1:1..37293,gap(140),ALWS01100268.1:1..41814,gap(1172), ALWS01100269.1:1..22736,gap(52),ALWS01100270.1:1..21009,gap(128), ALWS01100271.1:1..31151,gap(3564),ALWS01100272.1:1..3171,gap(24), ALWS01100273.1:1..5737,gap(57),ALWS01100274.1:1..16091,gap(154), ALWS01100275.1:1..8043,gap(52),ALWS01100276.1:1..4386,gap(18), ALWS01100277.1:1..11071,gap(145),ALWS01100278.1:1..24764,gap(81), ALWS01100279.1:1..9134,gap(18),ALWS01100280.1:1..52524,gap(44), ALWS01100281.1:1..12190,gap(41),ALWS01100282.1:1..5651,gap(51), ALWS01100283.1:1..21644,gap(36),ALWS01100284.1:1..7626,gap(12), ALWS01100285.1:1..31690,gap(12323),ALWS01100286.1:1..46238, gap(123),ALWS01100287.1:1..18159,gap(18),ALWS01100288.1:1..15289, gap(34),ALWS01100289.1:1..70146,gap(64),ALWS01100290.1:1..29365, gap(987),ALWS01100291.1:1..43488,gap(57),ALWS01100292.1:1..30373, gap(18),ALWS01100293.1:1..17323,gap(21),ALWS01100294.1:1..31632, gap(22),ALWS01100295.1:1..11212,gap(52),ALWS01100296.1:1..11721, gap(59),ALWS01100297.1:1..222,gap(867),ALWS01100298.1:1..30574, gap(90),ALWS01100299.1:1..15535,gap(169),ALWS01100300.1:1..9024, gap(29),ALWS01100301.1:1..110795,gap(37),ALWS01100302.1:1..39998, gap(52),ALWS01100303.1:1..27238,gap(17),ALWS01100304.1:1..3259, gap(13),ALWS01100305.1:1..5406,gap(143),ALWS01100306.1:1..24310, gap(450),ALWS01100307.1:1..22458,gap(166),ALWS01100308.1:1..9292, gap(37),ALWS01100309.1:1..19741,gap(62),ALWS01100310.1:1..17831, gap(84),ALWS01100311.1:1..3268,gap(66),ALWS01100312.1:1..6388, gap(2048),ALWS01100313.1:1..2789,gap(2631),ALWS01100314.1:1..4665, gap(543),ALWS01100315.1:1..705,gap(133),ALWS01100316.1:1..1869, gap(65),ALWS01100317.1:1..17549,gap(302),ALWS01100318.1:1..55987, gap(40),ALWS01100319.1:1..3796,gap(37),ALWS01100320.1:1..6361, 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gap(33),ALWS01100351.1:1..32267,gap(848),ALWS01100352.1:1..8201, gap(161),ALWS01100353.1:1..7333,gap(137),ALWS01100354.1:1..23679, gap(1324),ALWS01100355.1:1..44042,gap(41),ALWS01100356.1:1..384, gap(10),ALWS01100357.1:1..6145,gap(10),ALWS01100358.1:1..8539, gap(39),ALWS01100359.1:1..5085,gap(46),ALWS01100360.1:1..8440, gap(133),ALWS01100361.1:1..12549,gap(11),ALWS01100362.1:1..2799, gap(148),ALWS01100363.1:1..10971,gap(17),ALWS01100364.1:1..19049, gap(251),ALWS01100365.1:1..15318,gap(95),ALWS01100366.1:1..17541, gap(1678),ALWS01100367.1:1..43637,gap(27),ALWS01100368.1:1..33069, gap(10),ALWS01100369.1:1..9461,gap(42),ALWS01100370.1:1..9090, gap(456),ALWS01100371.1:1..30997,gap(97),ALWS01100372.1:1..126767, gap(531),ALWS01100373.1:1..3102,gap(366),ALWS01100374.1:1..480, gap(3631),ALWS01100375.1:1..12204,gap(27),ALWS01100376.1:1..19918, gap(402),ALWS01100377.1:1..13244,gap(11),ALWS01100378.1:1..55575, gap(1446),ALWS01100379.1:1..12195,gap(97),ALWS01100380.1:1..16568, gap(393),ALWS01100381.1:1..32296,gap(512),ALWS01100382.1:1..34850, gap(263),ALWS01100383.1:1..5507,gap(15),ALWS01100384.1:1..24580, gap(74),ALWS01100385.1:1..25313,gap(19),ALWS01100386.1:1..37107, gap(822),ALWS01100387.1:1..10053,gap(15),ALWS01100388.1:1..8208, gap(230),ALWS01100389.1:1..39262,gap(40),ALWS01100390.1:1..3322, gap(76),ALWS01100391.1:1..390,gap(64),ALWS01100392.1:1..15581, gap(35),ALWS01100393.1:1..10745,gap(1487),ALWS01100394.1:1..25951, gap(85),ALWS01100395.1:1..33497,gap(715),ALWS01100396.1:1..43811, gap(99),ALWS01100397.1:1..35714,gap(64),ALWS01100398.1:1..2798, gap(50),ALWS01100399.1:1..15550,gap(129),ALWS01100400.1:1..43304, gap(13),ALWS01100401.1:1..8791,gap(41),ALWS01100402.1:1..90231, gap(20),ALWS01100403.1:1..7965,gap(62),ALWS01100404.1:1..250, gap(54),ALWS01100405.1:1..32096,gap(45),ALWS01100406.1:1..19699, gap(29),ALWS01100407.1:1..15760,gap(876),ALWS01100408.1:1..14842, gap(532),ALWS01100409.1:1..3643,gap(48),ALWS01100410.1:1..25342, gap(13),ALWS01100411.1:1..7063,gap(844),ALWS01100412.1:1..22409, gap(29),ALWS01100413.1:1..28556,gap(2545),ALWS01100414.1:1..12093, gap(375),ALWS01100415.1:1..13582,gap(503),ALWS01100416.1:1..60218, gap(124),ALWS01100417.1:1..64462,gap(175),ALWS01100418.1:1..58474, gap(83),ALWS01100419.1:1..45142,gap(28),ALWS01100420.1:1..24204, gap(566),ALWS01100421.1:1..7650,gap(27),ALWS01100422.1:1..26126, gap(43),ALWS01100423.1:1..28854,gap(184),ALWS01100424.1:1..25007, gap(49),ALWS01100425.1:1..7062,gap(17),ALWS01100426.1:1..3067, gap(17),ALWS01100427.1:1..9868,gap(50),ALWS01100428.1:1..2303, gap(48),ALWS01100429.1:1..10394,gap(24),ALWS01100430.1:1..1198, gap(49),ALWS01100431.1:1..62690,gap(33),ALWS01100432.1:1..14113, gap(73),ALWS01100433.1:1..32720,gap(1888),ALWS01100434.1:1..46962, gap(63),ALWS01100435.1:1..1823,gap(49),ALWS01100436.1:1..31770, gap(1363),ALWS01100437.1:1..3679,gap(49),ALWS01100438.1:1..37524, gap(38),ALWS01100439.1:1..33520,gap(56),ALWS01100440.1:1..11803, 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ALWS01100530.1:1..30515,gap(92),ALWS01100531.1:1..21861,gap(916), ALWS01100532.1:1..3562,gap(19),ALWS01100533.1:1..57289,gap(119), ALWS01100534.1:1..35297,gap(390),ALWS01100535.1:1..35427,gap(26), ALWS01100536.1:1..588,gap(11),ALWS01100537.1:1..712,gap(20), ALWS01100538.1:1..9022,gap(24),ALWS01100539.1:1..31214,gap(75), ALWS01100540.1:1..10603,gap(832),ALWS01100541.1:1..8832,gap(10), ALWS01100542.1:1..841,gap(38),ALWS01100543.1:1..26016,gap(130), ALWS01100544.1:1..2335,gap(429),ALWS01100545.1:1..47380,gap(29), ALWS01100546.1:1..7046,gap(182),ALWS01100547.1:1..8413,gap(71), ALWS01100548.1:1..18852,gap(64),ALWS01100549.1:1..13262,gap(39), ALWS01100550.1:1..10553,gap(233),ALWS01100551.1:1..29981,gap(27), ALWS01100552.1:1..30712,gap(963),ALWS01100553.1:1..34426,gap(30), ALWS01100554.1:1..16530,gap(34),ALWS01100555.1:1..20609,gap(29), ALWS01100556.1:1..25272,gap(96),ALWS01100557.1:1..18950,gap(933), ALWS01100558.1:1..3787,gap(34),ALWS01100559.1:1..4216,gap(40), 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ALWS01100680.1:1..17704,gap(2470),ALWS01100681.1:1..52246, gap(1497),ALWS01100682.1:1..6600) //