LOCUS KB031037 19529538 bp DNA linear CON 19-MAR-2015 DEFINITION Pteropus alecto unplaced genomic scaffold scaffold106, whole genome shotgun sequence. ACCESSION KB031037 ALWS01000000 VERSION KB031037.1 DBLINK BioProject: PRJNA171993 BioSample: SAMN01103203 KEYWORDS WGS. SOURCE Pteropus alecto (black flying fox) ORGANISM Pteropus alecto Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus. REFERENCE 1 (bases 1 to 19529538) AUTHORS Zhang,G., Cowled,C., Shi,Z., Huang,Z., Bishop-Lilly,K.A., Fang,X., Wynne,J.W., Xiong,Z., Baker,M.L., Zhao,W., Tachedjian,M., Zhu,Y., Zhou,P., Jiang,X., Ng,J., Yang,L., Wu,L., Xiao,J., Feng,Y., Chen,Y., Sun,X., Zhang,Y., Marsh,G.A., Crameri,G., Broder,C.C., Frey,K.G., Wang,L.F. and Wang,J. TITLE Comparative analysis of bat genomes provides insight into the evolution of flight and immunity JOURNAL Science 339 (6118), 456-460 (2013) PUBMED 23258410 REFERENCE 2 (bases 1 to 19529538) AUTHORS Zhang,G., Cowled,C. and Wang,L. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.06 Genome Coverage :: 110x Sequencing Technology :: Illumina HighSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..19529538 /organism="Pteropus alecto" /mol_type="genomic DNA" /submitter_seqid="scaffold106" /db_xref="taxon:9402" /chromosome="Unknown" /sex="male" /tissue_type="kidney" /geo_loc_name="Australia: Anglican Church Grammer School, East Brisbane" /collection_date="Nov-2008" gene complement(<12065..>39164) /locus_tag="PAL_GLEAN10017265" mRNA complement(join(<12065..12240,12461..12724,14009..14257, 37882..38160,38378..38656,39086..>39164)) /locus_tag="PAL_GLEAN10017265" /product="T-cell surface glycoprotein CD1b-1" CDS complement(join(12065..12240,12461..12724,14009..14257, 37882..38160,38378..38656,39086..39164)) /locus_tag="PAL_GLEAN10017265" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="T-cell surface glycoprotein CD1b-1" /protein_id="ELK05792.1" /db_xref="InterPro:IPR003597" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR011162" /db_xref="UniProtKB/Swiss-Prot:Q28565" /translation="MEGFFRRLYIELYYIFHNYASQWKFEYPFVVQMAAGCELHSGEA KEGFVWFAYQGSDLLNFQNYSWLPSPKGGTGAQQVCGLFNQDPVDNEITHRHISDTCP RFLLGLLDAGKADLQRQVRPEAWLSIGPNPGSDHRMLICHVSGFYPKPIWAMWMRGEQ VQQGTQRRDVLPNADGTWYLRIYLNVETIERSGLSCRVRHSSLGGKDIILYLAFQGPT SFHVILILSFANSTWAQNQGLSWLHDLQIHGWDSDSGTTIFLKPWSKGNFSDEEVTEL KELFLVYLIGFIRVIQDHVNPFEIQGIAGCELHSGEATVNFLRGALGGLDFLSLKNDS RVPVSESSSMAQHTQNQGIYDTIEKLLLETCPRYLLGVLNVGKAELQRQVKSKAWLSS GLSCGPGLLLLVYHVSGFYSKPAWVMWMRGEHEQPGTQQGDILPKADGT" assembly_gap 34549..34582 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 68602..68656 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 71942..75361 /estimated_length=3420 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<85847..>181697) /locus_tag="PAL_GLEAN10017266" mRNA complement(join(<85847..86163,86386..86664,87097..87360, 135019..135149,181597..>181697)) /locus_tag="PAL_GLEAN10017266" /product="T-cell surface glycoprotein CD1a" CDS complement(join(85847..86163,86386..86664,87097..87360, 135019..135149,181597..181697)) /locus_tag="PAL_GLEAN10017266" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0042612 - MHC class I protein complex [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]; GO_process: GO:0019882 - antigen processing and presentation [Evidence IEA]" /codon_start=1 /product="T-cell surface glycoprotein CD1a" /protein_id="ELK05793.1" /db_xref="InterPro:IPR001039" /db_xref="InterPro:IPR003597" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR011162" /db_xref="UniProtKB/Swiss-Prot:Q9XS72" /translation="MEEKVKRECPENIRQFNFFLSLVLPTLLSTCKDFVISGELAVHV RSGILSLFFNTEALVWRVNEWGARGDNKQADRPVFQEQIFQIIYTSSFYNRSWTQSWS SGWLGDLQTHSWESNSGRIIFLRPWSKGNFSKKEITEEEGFFRRFHIELYHILHNYAS QWKFEYPFVVQMATGCELHSGEAKEGFVWFAYQGSELLSFQNDSWLPSPKGGTRAQQV CRLFNQSKGGKKITHERLSDTCPRFLLGLLDAGKADLQRQVRPEAWLSIGLNPGSDHR MLICHVSGFYPKPIWAMWMRGEQVQQGTQRRDVLPNADGTWYLRIYLNVETIETSGLS CRVRHSSLGGKDIILYLGKEELGPNWEWE" assembly_gap 88017..88055 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 97804..99580 /estimated_length=1777 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 111854..111902 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 141457..141479 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 150546..150584 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 153727..157133 /estimated_length=3407 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 166426..167135 /estimated_length=710 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 177025..180034 /estimated_length=3010 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 197125..197239 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<211779..>228996) /locus_tag="PAL_GLEAN10017268" mRNA complement(join(<211779..212255,212497..212574, 213136..213275,213446..213553,214807..215005, 216477..216577,216654..216780,217605..217732, 217972..218120,218267..218372,219603..219753, 221607..221764,226972..227121,228978..>228996)) /locus_tag="PAL_GLEAN10017268" /product="Kin of IRRE-like protein 1" CDS complement(join(211779..212255,212497..212574, 213136..213275,213446..213553,214807..215005, 216477..216577,216654..216780,217605..217732, 217972..218120,218267..218372,219603..219753, 221607..221764,226972..227121,228978..228996)) /locus_tag="PAL_GLEAN10017268" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Kin of IRRE-like protein 1" /protein_id="ELK05794.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013162" /db_xref="UniProtKB/Swiss-Prot:Q96J84" /translation="MGQGLKAWPRYRVVGSADAGQYNLEITDAELSDDASYECQATEA ALRSRRAKLTVLIPPEDTRIDGGPVLLLQAGTPHNLTCRAFSAKPAATIIWFRDGTQQ DGAVSSTELLKDGKRETTISQLLINPTDLDIGRVFTCRSMNEAIPSGKETSIELDVHH PPTVTLSIEPQTVQEGERVVFTCQATANPEILGYRWAKGGFLIEDAHDSRYETNVDYS FFTEPVSCEVHNRVGSTNVSTLVNVHFAPRIVVDPKPTTTDIGSDVTLTCVWVGNPPL TLTWTKKDSNMVLSNSNQLLLKSVTQADAGTYTCRAIVPRIGVAEREVPLYVNGPPII SSEAVQYAVRGDGGKVECFIGSTPPPDRIAWAWKENFLEVGTLERYTVERTNSGSGVL STLTINNVMEADFQTHYNCTAWNSFGPGTAIIQLEEREVLPVGIIAGATIGAGILLTF FFITLAFFLYRRRKGSRKDVTLRKLDIKVETVNREPLTMHSDREDDNASVSTATRVMK AIYSSFKDDVDLKQDMRCDTMDTREEYEMKDPTNGYYNVRAHEDRPSSRAVLYADYRA PGPARFDGRPSSRLSHSSGYAQLNTYSRAPASEYGPEPTAPGPAAPAVTDTTSQLSYE NYEKFSSHPFPGAAGYPTYRLGYPQAPPSGLERTPFEAYDPIGKYATATRFSYTSQHS DYGQRFQQRMQTHV" assembly_gap 216894..217034 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 227822..227845 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 245666..245722 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 246824..246865 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 252751..252791 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 314560..314978 /estimated_length=419 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 355151..355661 /estimated_length=511 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 362901..362927 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 363852..363945 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 369983..370510 /estimated_length=528 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <394468..>418309 /locus_tag="PAL_GLEAN10017269" mRNA join(<394468..394732,407058..407381,408487..408798, 416226..416546,418275..>418309) /locus_tag="PAL_GLEAN10017269" /product="CD5 antigen-like protein" CDS join(394468..394732,407058..407381,408487..408798, 416226..416546,418275..418309) /locus_tag="PAL_GLEAN10017269" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005044 - scavenger receptor activity [Evidence IEA]" /codon_start=1 /product="CD5 antigen-like protein" /protein_id="ELK05795.1" /db_xref="InterPro:IPR001190" /db_xref="InterPro:IPR017448" /db_xref="UniProtKB/Swiss-Prot:O43866" /translation="MLLVFPYGTVISVIHFQTLFKDRWHSPVNKRKLRNLRKEIAIPT QTTRNGDGVDPRQWIYRPEKEKSGLDKTETILLVTQINGILCLLGSSSRVRLVGGPHH CEGRVEVEQEGQWGTVCDDGWDIKDVAVVCQELGCGVANGTPSGVSYKPLAEKEQNIF MQEVKCNGMEASLFHCERAEDVFDCSHNEDAGALCEKNVRLAGGPGRCKGRVEVKHQG QWGTVCNAGWNLSAAKVVCQQLGCGRAIQTRRCCNKATQGQGTIWLTQVSCSGKEVSL WDCPSGHWGKNNCTHEEDTWVECEDPFDLRLVGGDIRCSGRLEVLHKGVWGSVCDDGW GKKEDQVVCKQLGCGESLSPSVKARRSFGPGVGRIWLDDVHCSGKEQSLEQCQHRFWG YHNCNHKEDVAVICSGVDHSFMSSIL" assembly_gap 417858..417885 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 428873..428912 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<429063..>690698) /locus_tag="PAL_GLEAN10017270" mRNA complement(join(<429063..429199,435214..435360, 437884..438024,438665..438763,441225..441437, 442540..442621,445148..445577,450674..450786, 451501..451593,463279..463475,463706..463772, 476618..476767,479390..479477,482470..482645, 496258..496389,497091..497219,505115..505213, 513353..513446,515916..515984,517488..517660, 521861..521915,522017..522116,522795..522876, 532627..532696,535899..536003,538901..538977, 539109..539186,541541..541644,547024..547110, 557092..557186,558325..558413,562463..562538, 570871..570944,571195..571265,571600..571697, 579194..579315,586335..586394,597029..597079, 687877..687974,690587..>690698)) /locus_tag="PAL_GLEAN10017270" /product="Leucine-rich repeat-containing protein 16A" CDS complement(join(429063..429199,435214..435360, 437884..438024,438665..438763,441225..441437, 442540..442621,445148..445577,450674..450786, 451501..451593,463279..463475,463706..463772, 476618..476767,479390..479477,482470..482645, 496258..496389,497091..497219,505115..505213, 513353..513446,515916..515984,517488..517660, 521861..521915,522017..522116,522795..522876, 532627..532696,535899..536003,538901..538977, 539109..539186,541541..541644,547024..547110, 557092..557186,558325..558413,562463..562538, 570871..570944,571195..571265,571600..571697, 579194..579315,586335..586394,597029..597079, 687877..687974,690587..690698)) /locus_tag="PAL_GLEAN10017270" /codon_start=1 /product="Leucine-rich repeat-containing protein 16A" /protein_id="ELK05796.1" /db_xref="InterPro:IPR003590" /db_xref="UniProtKB/Swiss-Prot:Q5VZK9" /translation="MGRWSGIRNETGKAWLRLAIWERKGYRTDANSGQEIEENIKDVV GRKIKIGVKKKIKLEVKGDKVENKVLVLTSCRAFLLTARIPTKLELTFSYLEIHGVTC SKPAQMVVETEKSSMSMRMASPEDVSEVLAHIGSCLRRIFPGLSPVRIMKKVSMEPSE RLASLQALWDSQTVSEQGPCGGFSQMYACVCDWLGFPYREEVQWDVDTIYLTQDTREL NLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILRVVSRSNRLEELV LENAGLRTDFAQKLASALAHNPSSGLHTIDLAGNPLEDRGISSLSIQFAKLPKGLKHL NLSKTSLSPKGVNSLSQSLSANPLTATTLIHLDLSGSGLRGDDLSYMYSFLAQPNAIA HLDLSNTECSLDVVCGALLRGCLQHLAVLNLSRTVFSYRKGKEVPLTFKQFFSSSLAL MQINLSGTKLSPEPLKALLLGLASNHNLKGVSLDLSNCELRSGGAQVLEGCIAEIHNI TSLDISDNGLESDLSTLIVWLSKNRSIQHLALGRNFNNMKSKNLAPVLDNLVQMIQDE ESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQINTK LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIE NYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGDAVQED LKLAERLMRDAKNSKTLLPNLYHVGGASWAGAGGSLSSPIQETLESMAGEVTRVVDEQ LKALLESMVDAAENLCPNVMKKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILN KISEVKLTVASFLSDRIVDEILDALSHCHHKLTDHFSRRGKTLPQQESLEIELAEEKP VKRSVITVEELTEIERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEE VPIHIEDPPFPSVRQEKRSSGFISELPSEEGKKLEHFTKLRPKRNKKQQPTQAAVCAA SIVPQDGEQNGLMGRVDEGVDEFFTKKVCAASIVPQDGEQNGLMGRVDEGVDEFFTKK VTKMDSKKSSAKSSEFHELSEGGDEKKKRDSRRSGFLNLIKSRSKSERPPTVLMTEEP SSPKGVVRSPAMDTPRKDTKLDEHNGNSEWSEEIKTPDSHEESQEEDMGKAERSDSKG SPQGGRRYGVQVMGSDLLAEMKAKQEQRAACAQKKLGNDAISQESSSLATSNTERLEG GGAVPKLHPGLPETRFSLGTPEKNVKTDPKVDMGSRSRSSSSTPTSPKPLLQSPKPSP AARPTVPQKPRTASRPVGKIVAALNARAGLLHVMTQNPYNAVIHLGHSNEDVPDSPPG HSSPKVALLPPVLKKVPSDKEKEGQGSPQPSPRTFSQEVQRGDYYKRHSDHDSDKPSS KEKRSSKLYSTIAEEEVNAVGHRKSQPTNVSRRSWGQQAQEYQDQKQWSSSKDSHQGS KSSDSGEEAEKEFIFV" assembly_gap 440119..440188 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 456313..456332 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 462086..462148 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 462924..462942 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 464805..464820 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 541002..541076 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 560357..560393 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 561559..561594 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 577787..577805 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 590361..591047 /estimated_length=687 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 640205..640254 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 699911..700016 /estimated_length=106 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<704163..>704799) /locus_tag="PAL_GLEAN10017271" mRNA complement(join(<704163..704292,704489..>704799)) /locus_tag="PAL_GLEAN10017271" /product="60S ribosomal protein L13a" CDS complement(join(704163..704292,704489..704799)) /locus_tag="PAL_GLEAN10017271" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="60S ribosomal protein L13a" /protein_id="ELK05797.1" /db_xref="InterPro:IPR005822" /db_xref="UniProtKB/Swiss-Prot:P40429" /translation="MPKSLPLPGQSHVFWQTVRGVLPHKTKRGQAVLDCLKVFDGIPP HYVKKKRKLKYLAFLCKRMNTNPCRSPYHFRARATSFGRQCEECCPTRPSGARLCWTA SRKKAKIHYRKRKQLMRLQKQAEKNVEKKIDRYTEVLKTHGLLV" assembly_gap 704296..704373 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 732523..732550 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 745863..745931 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 750638..750976 /estimated_length=339 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 759560..760081 /estimated_length=522 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 778292..778329 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 792291..793579 /estimated_length=1289 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <802161..>837947 /locus_tag="PAL_GLEAN10017272" mRNA join(<802161..802168,802383..802586,804016..804107, 809003..809112,810361..810551,813199..813346, 813668..813749,814526..814663,817038..817173, 820719..820859,830553..830727,832291..832407, 837876..>837947) /locus_tag="PAL_GLEAN10017272" /product="Cytidine monophosphate-N-acetylneuraminic acid hydroxylase" CDS join(802161..802168,802383..802586,804016..804107, 809003..809112,810361..810551,813199..813346, 813668..813749,814526..814663,817038..817173, 820719..820859,830553..830727,832291..832407, 837876..837947) /locus_tag="PAL_GLEAN10017272" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Cytidine monophosphate-N-acetylneuraminic acid hydroxylase" /protein_id="ELK05798.1" /db_xref="InterPro:IPR017941" /db_xref="UniProtKB/Swiss-Prot:Q61419" /translation="MSSIEQTAEILLYLSPVEVANLKEGINFFRNKSTGKDYIFYKNK SHLRACKNLCKHQGGLFIKDIEDLDGRSVKCTKHNWKLDVSTMKYINPPGSFCQDELV IEMDEENGLSLLELNPPNPWDSEPRSPEDLAFGEVQITYLTHACMDLKLGDKRMVFDP WLIGPAFARGWWLLHEPPSDWLERLCRADLIYISHMHSDHLSYPTLKKLAEKRPDIPI YVGNTERPVFWNMNQSGVQLTNINVVPFGIWQQVDKNLRFMILMDGVHPEMDTCIIVE YKGHKILNTVDCTRPNGGRLPMKVALMMSDFAGGASGFPMTFSGGKFTEEWKAQFIKT ERKKLLNYKVRLVKDLQPRIYCPFAGYFVESHPSDKYIKETNIKNDPNELNNLIRKNS DVVTWTPQPGATLDLGRMLKDPTDSKGIIDPPEGTKIYKDSWDFGPYLKILNAAVGDK IFLHSAWIKEYFTWAGFKDYNLVVRMIETNEDFSPFPGGYDYLVDFLDLSFPKERPSR EHPYEEVLESFPNKTPTNTTQLAVLPDAL" assembly_gap 840798..840813 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 845080..845102 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 859573..859656 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 871086..871143 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 880440..880478 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 883936..886825 /estimated_length=2890 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 890185..890358 /estimated_length=174 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 900020..900059 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 900265..900282 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 910548..910563 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <925518..>1027881 /locus_tag="PAL_GLEAN10017273" mRNA join(<925518..925578,977015..977150,980086..980241, 980960..981038,982488..982511,983621..983674, 987486..987635,990953..991016,997891..997934, 998906..999031,999349..999497,1000822..1000951, 1001347..1001496,1004423..1005100,1007758..1007939, 1010190..1010358,1014980..1015115,1016337..1016498, 1017641..1017799,1020063..1020265,1022535..1022618, 1025473..1025563,1027781..>1027881) /locus_tag="PAL_GLEAN10017273" /product="Protein FAM65B" CDS join(925518..925578,977015..977150,980086..980241, 980960..981038,982488..982511,983621..983674, 987486..987635,990953..991016,997891..997934, 998906..999031,999349..999497,1000822..1000951, 1001347..1001496,1004423..1005100,1007758..1007939, 1010190..1010358,1014980..1015115,1016337..1016498, 1017641..1017799,1020063..1020265,1022535..1022618, 1025473..1025563,1027781..1027881) /locus_tag="PAL_GLEAN10017273" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Protein FAM65B" /protein_id="ELK05799.1" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q9Y4F9" /translation="MQSLDPKELLVNEEDDVFGEGLPARLPEIMLVGSQSSSPGGPNG IIRSQSFAGFSGLQERRSRQVVCNSFIENSSALKKPQAKLKKMHNLGHKNNSPPKEPQ PNRVEEVYRALKSGLNEYLEGHQTELDKLTAQLKDMKRNSRLGVLYDLDKQIKTIERY MRRLEFHISKVDELYEAYCIQRRLQDGANKMKQAFAMSPASKAARESLSEVHRSYKEY TENMCTIEAELESLLGEFSIKMKGLAGFARLCPGDQYEIFMKYGRQRWKLKGKIEVNG KQSWDGEEMVFLPLIAGLISIKVTEVKGLANHLLVGSVTCETKELFAARPQVLAVDIN DLGTVKLNLEIAWYPFDVEDVTTSSGTGNKAAALQRRMSIYSQGTPETPTFKDHSFFR WLLPSPDKPRRLSVLSALQDTYFAKLHRSHSSSDLPSLRLRPKTVLEFYSNLPDDIFE QGKVAEQKMPLSLSFSDLPDGDCALVPSPAGSLSSTCSANPEVTITPAKLHRGSLSSQ NEGTDDSSSACSRTSSGGSQGPKPHLQEDTEGSRKAEAHRASTGASAERLFLEKDVTV ALMQESDEASELKPVELDTFEGNITKQLVKRLTSAEVPAATEKLLFEGSVSGESEGCR SFLDGSLEDAFHGLFLALEPHKEQYKEFQDLNQEVMHLDDILKCKPTGSRSRSSSLSL TVESALESFDFLNTSDFDEEEDGDEVCTIGGGADSVFSDIETEKNSYRSVHPEARGHL SEALTEDTGVGTSVAGSPLPLTTGNESLDITIVRHLQYCTQLVQQIVFSSKTPFVARN LLEKLSRQIQVMEKLSAVSDENTGNISSVVEAIPEFHKKMSLLSFWTKCCSPVGVYHS SADRVIKQLEASFAGSVNRDYPGLADPVFRTLVSQILDRAEPLLSSSLSSEVITVFQY YSYFTSHGVSDLESYLNQLAKQVSIVQTLQSLRDGKLLRALSGLAPGSLPAQQDVLRA LALLLTGEDDGVSEAVRLYLVAAAGNEHFREKALLYYCEALTRTDLHLQKAACLALKS LEATESIKMLVTLCQSDTEEIRNVASETLLSLGEDGRLAYEQLDKFPRDCVKVGGRHG TEVATAF" assembly_gap 930501..930539 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 943735..944373 /estimated_length=639 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 952031..952053 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 961200..961218 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 961895..962075 /estimated_length=181 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 969412..970027 /estimated_length=616 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 972111..972193 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 985965..986009 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1030032..>1044733 /locus_tag="PAL_GLEAN10017274" mRNA join(<1030032..1030107,1031860..1032251,1044029..>1044733) /locus_tag="PAL_GLEAN10017274" /product="hypothetical protein" CDS join(1030032..1030107,1031860..1032251,1044029..1044733) /locus_tag="PAL_GLEAN10017274" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05800.1" /translation="MLKDKSLALEKRAQAAYRIGLLAFTGGPTAGKFAAEYMKEVAHL LQDHEMAPKTRIQLLQSVACWCYLNPVNQKRAKHLQFIPILIGFFDNKLESTTKSEIN SNRMVKFWTCYVLSVMTCNNLSCMQELKNRTTLKHQLQMLASENWSGWPENFAEDTRI QWPSPQAQRANPQDRQSLVLGERTFRLGDSQVRGIDPAHLRPHSPLDTDQQGTLCSPT ARAWRTAATAANRERRCGARQNQPRQRGSPRLAARPARLPRPFPNPLTPTRRLSGGVT GRPTPGVQERKAASRVTPVYNNSPATSLTRRMETPACVRKKRDGRLTQGPQRNCDCPN FRRSSTVLKSLANSARPRRRLRDPWRDEGWSFPYPANRRLSLPASAPPAPEPEQWA" assembly_gap 1046989..1051582 /estimated_length=4594 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1057815..1063396 /estimated_length=5582 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1079284..1079322 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1092343..>1099060 /locus_tag="PAL_GLEAN10017276" mRNA join(<1092343..1092471,1094149..1094325,1095170..1095292, 1095896..1096030,1098935..>1099060) /locus_tag="PAL_GLEAN10017276" /product="hypothetical protein" CDS join(1092343..1092471,1094149..1094325,1095170..1095292, 1095896..1096030,1098935..1099060) /locus_tag="PAL_GLEAN10017276" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05801.1" /db_xref="InterPro:IPR020524" /db_xref="UniProtKB/Swiss-Prot:Q99LU8" /translation="MGDPNSRKKQALNRLRAQLRKKKESLADQFDFKMYIAFVFKEKK KKSALFEVSEVIPVMTNNYEENILKGVRDSSYSLESSIELLQKDVVQLHAPRYQSMRR DVIGCTQEMDFILWPRNDIEKIVCLLFSRWKESDEPFRPVQAKFEFHHGDYEKQFLHV LSRKDKTGIVVNNPNQSVFLFIDRQHLQTPKNKATIFKLCSICLYLPQEQLTHWAVGT IEDHLHPYMPE" gene complement(<1102601..>1111521) /locus_tag="PAL_GLEAN10017277" mRNA complement(join(<1102601..1102757,1104713..1104897, 1111149..1111295,1111402..>1111521)) /locus_tag="PAL_GLEAN10017277" /product="Acyl-coenzyme A thioesterase 13" CDS complement(join(1102601..1102757,1104713..1104897, 1111149..1111295,1111402..1111521)) /locus_tag="PAL_GLEAN10017277" /codon_start=1 /product="Acyl-coenzyme A thioesterase 13" /protein_id="ELK05802.1" /db_xref="InterPro:IPR006683" /db_xref="UniProtKB/Swiss-Prot:Q5R833" /translation="MRAQRVSAAPHQPLGWPACSAAGRQAGLWSRRLAGAEVKTLLGF QVLQRFTLAQDPEASERPMMSLTQNLRETIQCFSRVRNFNRVLEKVTPVSAAPGKVIC ELKVEEEHTNTFGTAHGGLIATLVDIISTIALLQTERGSPGVSVDMNITYMSPAKLGD EIVITAHVLKQGKILGFASVDLTNKATGKLIAQGRQTKYLGN" gene <1111567..>1137512 /locus_tag="PAL_GLEAN10017278" mRNA join(<1111567..1111764,1111842..1111927,1115575..1115748, 1116437..1116528,1137331..>1137512) /locus_tag="PAL_GLEAN10017278" /product="TRAF and TNF receptor-associated protein" CDS join(1111567..1111764,1111842..1111927,1115575..1115748, 1116437..1116528,1137331..1137512) /locus_tag="PAL_GLEAN10017278" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="TRAF and TNF receptor-associated protein" /protein_id="ELK05803.1" /db_xref="InterPro:IPR005135" /db_xref="InterPro:IPR009060" /db_xref="UniProtKB/Swiss-Prot:O95551" /translation="MELESTPEAGPMGPESSPEARQEAGRDEGEPAGKKWRLLCEEFS SVASCSVSVARRCLAENDWEMERALNAYFEPQVEEGALKRRPETASEPGNCVDLTNEE TTDSVSSKTSTSENLQQEDGSVFSFITWNIDGLDPNNLQERIRGVCSCLALYSPDVIF LQEVIPPYYSYLKKKASSYEIITDSQYPTELSKAYTEPPFYMGDGGGDWYFHETELLL GEEARPSYLACAFCSTKLLCCELYT" gene complement(<1138164..>1170290) /locus_tag="PAL_GLEAN10017279" mRNA complement(join(<1138164..1138369,1139586..1139644, 1142524..1142693,1146439..1146597,1148376..1148519, 1157749..1157892,1162107..1162223,1163601..1163771, 1164478..1164561,1169955..>1170290)) /locus_tag="PAL_GLEAN10017279" /product="Succinate-semialdehyde dehydrogenase, mitochondrial" CDS complement(join(1138164..1138369,1139586..1139644, 1142524..1142693,1146439..1146597,1148376..1148519, 1157749..1157892,1162107..1162223,1163601..1163771, 1164478..1164561,1169955..1170290)) /locus_tag="PAL_GLEAN10017279" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Succinate-semialdehyde dehydrogenase, mitochondrial" /protein_id="ELK05804.1" /db_xref="InterPro:IPR015590" /db_xref="InterPro:IPR016161" /db_xref="UniProtKB/Swiss-Prot:Q8BWF0" /translation="MATCSWLRSCGAPRYPLVRPRRRLLPRPGCWASGRAPLRTYAPG PGGLPAALLRKDSFVGGRWLPAATAFPVLDPASGAELGCVADCGATEARGAVDTAYKA FCSWRGVSAKERSSLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSAFFLEW FSEEARRVYGDVICTPTKEKRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCT VVVKPAEDTPFSALALAELANQAGIPPGVYNVIPCSQRKAKDVGEALCTHPLVSKISF TGSTATGKILLHHAANSVKRVSMELGGHAPFIVFDSANVDQAVAGAMASKFRNSGQTC VCSNRFLVQRSIHDSFVKKFAEAIKTNLHVGNGFEERTTQGPLINEKAVEKVEKHVSD ALSKGATVVTGGKRHQLGKNFFEPTLLSNVTQNMLCSHEETFGPLAPVIKFDTEEEAV AMANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGMKQSGLGR EGSKYGIDEYLELKYVCFGGL" assembly_gap 1150279..1152357 /estimated_length=2079 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1154286..1154905 /estimated_length=620 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1166681..1166730 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1172829..>1218408 /locus_tag="PAL_GLEAN10017282" mRNA join(<1172829..1172896,1172971..1173008,1177441..1177496, 1183953..1184031,1187296..1187393,1187789..1187899, 1188696..1188744,1189406..1189460,1194656..1194763, 1194988..1195015,1195127..1195266,1197407..1197472, 1198983..1199103,1201107..1201246,1202861..1203047, 1205371..1205481,1206753..1206827,1206925..1207081, 1207608..1207749,1208578..1208683,1214228..1214390, 1214731..1214891,1215954..1215980,1218322..>1218408) /locus_tag="PAL_GLEAN10017282" /product="Phosphatidylinositol-glycan-specific phospholipase D" CDS join(1172829..1172896,1172971..1173008,1177441..1177496, 1183953..1184031,1187296..1187393,1187789..1187899, 1188696..1188744,1189406..1189460,1194656..1194763, 1194988..1195015,1195127..1195266,1197407..1197472, 1198983..1199103,1201107..1201246,1202861..1203047, 1205371..1205481,1206753..1206827,1206925..1207081, 1207608..1207749,1208578..1208683,1214228..1214390, 1214731..1214891,1215954..1215980,1218322..1218408) /locus_tag="PAL_GLEAN10017282" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0004621 - glycosylphosphatidylinositol phospholipase D activity [Evidence IEA]" /codon_start=1 /product="Phosphatidylinositol-glycan-specific phospholipase D" /protein_id="ELK05805.1" /db_xref="InterPro:IPR001028" /db_xref="InterPro:IPR013517" /db_xref="InterPro:IPR013519" /db_xref="UniProtKB/Swiss-Prot:P80109" /translation="MGLDLDFDLSADGSEQFPSPEEQGSPCGISTHIEIGHRALEFLH LQDGNVNYKELLAEHQDAYQAGTVFPDAFYPSICERGQFHDVSESTHWTPFLNASIHY IRENYPLPWEKDTEKLVAFLFGIASHMVADVSWHSLGIEQGFLRTMGDIDFHGSFSEA HAAGDFGGDVLSQFEFNFNYLSRHWYVPVEDLLGIYKKLYGRSVITKNAIVDCSYLQF LEMYGEMLAVSKLYPTYSRKSPFLVEQFQEYFLGGLDDMAFWSTNIYRLTGFMLENGT SDCNLPENPLFIACGARQTSPQSSQAQKNYFHRNLTASLTKNTEKNINYTKRGVVFSV DSWTSDSLSFMYQALERNIRMIFTGSSQRPLKHVSSPLASYFLSLPYARLGWAMTSAD LNQDGHGDLVVGAPGYSRPGHIHVGRVYLIYGNELGLPPIDLDLDKEAHGVLEGFQPS GRFGSAVAVLDFNKDGVPDLAVGAPSVGSKQLTYKGAVYVYFGSKRGSMSPSPNITIS CQDTYCNLGWALVAADLNGDREPDLVIGSPFAPGGGKQKGIVAAFYSDPGHSNKEKLD VEAADWMVRGEADFAWLGYSLHGVSVNNRTLLLVGSPTWKNTSSLGYLFHTRDEKQSL GRVYGYFPPNCHSWFTISGDKMMYKTMTLHQGGATRMYELTPDSQPSLLSTFSGDRRF SRFGGVLHLSDLDDDGIDEIIMAAPLRIADITSGLIGGEDGRVYVYNGKHTTFGDMTG KCKTWMSPCPEEKAQYVLISPENQVVIAAGRSSLGARLSGALHIYSLGLD" assembly_gap 1198466..1198494 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1222683..>1247614) /locus_tag="PAL_GLEAN10017283" mRNA complement(join(<1222683..1222763,1223300..1223413, 1228150..1228267,1228519..1228671,1231588..1231704, 1232151..1232281,1233917..1234090,1242733..1242845, 1244000..1244036,1245612..1245685,1247452..>1247614)) /locus_tag="PAL_GLEAN10017283" /product="Magnesium transporter MRS2 like protein, mitochondrial" CDS complement(join(1222683..1222763,1223300..1223413, 1228150..1228267,1228519..1228671,1231588..1231704, 1232151..1232281,1233917..1234090,1242733..1242845, 1244000..1244036,1245612..1245685,1247452..1247614)) /locus_tag="PAL_GLEAN10017283" /codon_start=1 /product="Magnesium transporter MRS2 like protein, mitochondrial" /protein_id="ELK05806.1" /db_xref="UniProtKB/Swiss-Prot:Q9HD23" /translation="MECLRSLPRLLSCAAGLPRHNLCAMACGLTPRAAILLGGSLAAR LCRPHRPRLAGEMHRFITSDVSQATLASVAPVFTVTKFDKEGNVTSFERKKTDLHQEL GLQARDLRFQHLMSITTRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWLFRELPS QLAGEGQLVTYPLPFEFRAIEALLQYWISTLQGKLSILQPLILDTLEALVDPKHSSVD RSKLHILLQNSKSLSELETDIKIFKESILEILDEEELLEELCLTKWSDPQVFEKSSTG IDHAEEMELLLENYYRLAEDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLT MGTFSISLFGLMGVAFGMNLESSLEEDHRVFWLITGIMFMGSGLIWRRLLSFLGRQLE APLPPMMASLPKKNLQANRSIEMKHSFRPDGL" gene <1247734..>1330948 /locus_tag="PAL_GLEAN10017285" mRNA join(<1247734..1247844,1257145..1257287,1259234..1259370, 1276704..1276828,1279794..1279980,1288564..1288729, 1300677..1300833,1327182..1327319,1330847..>1330948) /locus_tag="PAL_GLEAN10017285" /product="Choline transporter-like protein 3" CDS join(1247734..1247844,1257145..1257287,1259234..1259370, 1276704..1276828,1279794..1279980,1288564..1288729, 1300677..1300833,1327182..1327319,1330847..1330948) /locus_tag="PAL_GLEAN10017285" /codon_start=1 /product="Choline transporter-like protein 3" /protein_id="ELK05807.1" /db_xref="InterPro:IPR007603" /db_xref="UniProtKB/Swiss-Prot:A5PK40" /translation="MRRVRCACALLPAQARKGPLGEIILFGACDVGRDWLRMFITGYS VAAGATGRLLFGYDSFGNVCGKKNSPIEGAPLSGQDMTLKKHVFFTDSCNLQVKDGRL GSTVLCVSSCPEEQLNTLEDIQLFANNSVVCSVLWWLYHDYTNDLSIALDTEWENMMC LLGFAIVSTVLTAVLLILIFVLRKRVKLAIEIFRVTNKAISSSPFLLFQPLWTFAILI FFWVLWVAVLLSLGTAGAAQVIEGGQVEYKPLWGIRYMWWYHLIGLVWTSEFILACQQ MTVAGAVVTSYFNRNENDPPDHPILSSLAILFCYHQGTVIKGSFLITMVRIPRTVLMY IYNTLKDKNAYTTTAINGTDFCTSAKDALKLLSKNSSHFTSVNCFGDFIIFLGKSFIK RINKLNNARAQRDKNLRNEEGTELRPIVR" assembly_gap 1265563..1265606 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1336871..1336903 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1338806..>1361718) /locus_tag="PAL_GLEAN10017287" mRNA complement(join(<1338806..1339147,1340381..1340527, 1342200..1342316,1342691..1342828,1343625..1343691, 1343905..1344026,1361632..>1361718)) /locus_tag="PAL_GLEAN10017287" /product="Calponin-3" CDS complement(join(1338806..1339147,1340381..1340527, 1342200..1342316,1342691..1342828,1343625..1343691, 1343905..1344026,1361632..1361718)) /locus_tag="PAL_GLEAN10017287" /note="GO_function: GO:0003779 - actin binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0031032 - actomyosin structure organization [Evidence IEA]" /codon_start=1 /product="Calponin-3" /protein_id="ELK05808.1" /db_xref="InterPro:IPR000557" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR001997" /db_xref="InterPro:IPR003096" /db_xref="UniProtKB/Swiss-Prot:Q32L92" /translation="MATAPGVPRRCRSCGIPASGAARRGVHSAIASKYDHQAEEDLRN WIEEVTGMSIGTNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKA IQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTR RFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQM GTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQ VYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQDDYPGDYQYGD QGIDY" assembly_gap 1362511..1363203 /estimated_length=693 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1365227..1365237 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1368689..1368906 /estimated_length=218 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1399873..1399886 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1410407..1410476 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1411483..1411515 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1449406..>1480550) /locus_tag="PAL_GLEAN10017288" mRNA complement(join(<1449406..1449573,1453347..1453475, 1477058..1477209,1480415..>1480550)) /locus_tag="PAL_GLEAN10017288" /product="UDP-N-acetylglucosamine transferase subunit ALG14 like protein" CDS complement(join(1449406..1449573,1453347..1453475, 1477058..1477209,1480415..1480550)) /locus_tag="PAL_GLEAN10017288" /codon_start=1 /product="UDP-N-acetylglucosamine transferase subunit ALG14 like protein" /protein_id="ELK05809.1" /db_xref="InterPro:IPR013969" /db_xref="UniProtKB/Swiss-Prot:Q96F25" /translation="MESAVILAAVAGAAAVLLALRLWIVLHSRVVVPRESLSLMVVAG SGGHTTEILRLLEYLSNAYSPRHYVIADTDEMSAQKISSFELDRADRDPSTRSCERDG IMLQDTRVLQDIHVELHEKKGLNGNLVSRRVSLAGYQFPKYYIHRIPRSREVQQSWLS TVLSTLYSMWLSFPLTYRVKPDLVRMPIAPADYS" assembly_gap 1472875..1474474 /estimated_length=1600 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1490284..1491965 /estimated_length=1682 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1514634..1514685 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1522771..1523075 /estimated_length=305 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1561313..>1563568 /locus_tag="PAL_GLEAN10017289" mRNA join(<1561313..1561377,1563250..>1563568) /locus_tag="PAL_GLEAN10017289" /product="Transmembrane protein 56" CDS join(1561313..1561377,1563250..1563568) /locus_tag="PAL_GLEAN10017289" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Transmembrane protein 56" /protein_id="ELK05810.1" /db_xref="InterPro:IPR006634" /db_xref="UniProtKB/Swiss-Prot:Q8CGF5" /translation="MRIKVYGLIVRDLRVRRSKKRRWFFEALNYSKFCKANVINGILM TVVFFIVRIAAIPSFYGYMYSVFGTEAYVRLGFSVQFFWVLTCVILDVMNVMWMIKIS KGCIKVISLFRQEKTKNSLQNGKLD" assembly_gap 1581014..1581053 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1584261..1584334 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1584784..>1597390 /locus_tag="PAL_GLEAN10017290" mRNA join(<1584784..1584868,1597062..>1597390) /locus_tag="PAL_GLEAN10017290" /product="RWD domain-containing protein 3" CDS join(1584784..1584868,1597062..1597390) /locus_tag="PAL_GLEAN10017290" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="RWD domain-containing protein 3" /protein_id="ELK05811.1" /db_xref="InterPro:IPR006575" /db_xref="InterPro:IPR016135" /db_xref="UniProtKB/Swiss-Prot:Q5RDC7" /translation="MERSAQEELSALAAIFCGPGEWEMLSRSETDGTVFRILTKAEGL TDAEVPLELVFHLPVNYPSCLPAISVTSEHLTRAQCAAVKEKLLEQAENLLSEPMVHE LVLWVQXXXXXXXXXXXRNGKWQWKVYFQSKHGCG" assembly_gap 1597301..1597333 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1610919..1610966 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1628053..>1637761 /locus_tag="PAL_GLEAN10017291" mRNA join(<1628053..1628377,1629021..1629151,1637681..>1637761) /locus_tag="PAL_GLEAN10017291" /product="hypothetical protein" CDS join(1628053..1628377,1629021..1629151,1637681..1637761) /locus_tag="PAL_GLEAN10017291" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05812.1" /translation="MFLAVLWQASLEAQDQVQWVQQLQHQEAALERGLVAVEHMVQDP EGSLPSSWSGSPPAIPQQEQPVIQQQVEVDQLLASGASWLCLPGSKAYHLDPVHPRRT PEPDETDLLAAGGTAKKTEQQPNEVQLVLWNQLLPDQQFTVIPRTATTHEGRWSFLNN CAQAETTAEFHQGLLLNF" assembly_gap 1629931..1629944 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1662962..1662983 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1673857..1692274 /estimated_length=18418 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1709927..1709947 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1730657..1730688 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1744722..1744809 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1766321..1766363 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1791431..1791448 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1804191..1804926 /estimated_length=736 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1822913..1822928 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1877543..1877558 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1902177..1902231 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1904149..1904258 /estimated_length=110 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1920740..1920780 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1930642..1930652 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1940774..1940790 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1946395..1946409 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1964183..1964506 /estimated_length=324 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1967812..1967840 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1978108..1978318 /estimated_length=211 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2008385..2008413 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2091139..2091154 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2104943..2104984 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2107260..2107271 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2221518..2221527 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2233055..2233092 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2275685..2275789 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2285375..2285817 /estimated_length=443 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2338001..2338020 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2347080..2350415 /estimated_length=3336 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2356683..2356707 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2457618..2457646 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2476306..2476427 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2479527..2480976 /estimated_length=1450 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2498255..2498384 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2504384..2504642 /estimated_length=259 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2534631..2534785 /estimated_length=155 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2543978..2544011 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2547682..2550641 /estimated_length=2960 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2587311..>2619508 /locus_tag="PAL_GLEAN10017292" mRNA join(<2587311..2587442,2588693..2588836,2593881..2594045, 2594136..2594246,2602299..2602494,2611840..2611994, 2613528..2613561,2613980..2614072,2618815..2619031, 2619133..2619210,2619376..>2619508) /locus_tag="PAL_GLEAN10017292" /product="Polypyrimidine tract-binding protein 2" CDS join(2587311..2587442,2588693..2588836,2593881..2594045, 2594136..2594246,2602299..2602494,2611840..2611994, 2613528..2613561,2613980..2614072,2618815..2619031, 2619133..2619210,2619376..2619508) /locus_tag="PAL_GLEAN10017292" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="Polypyrimidine tract-binding protein 2" /protein_id="ELK05813.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q9UKA9" /translation="MDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQ AFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVT AVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIIT FTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSR DYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALSPLAIPNAAAAAAAAA AGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQ MADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRF KKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALL QMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI" assembly_gap 2613378..2613506 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2642254..2642305 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2672187..2672243 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2692868..2692898 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2698991..2699139 /estimated_length=149 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2699442..2699471 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2717240..2717562 /estimated_length=323 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2740035..2740079 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2759687..2759706 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2763545..2763658 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2764887..2765494 /estimated_length=608 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2781751..2782399 /estimated_length=649 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2807126..2807166 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2816058..>2839414) /locus_tag="PAL_GLEAN10017293" mRNA complement(join(<2816058..2816228,2819111..2819251, 2831649..2831792,2839307..>2839414)) /locus_tag="PAL_GLEAN10017293" /product="Dihydropyrimidine dehydrogenase [NADP+]" CDS complement(join(2816058..2816228,2819111..2819251, 2831649..2831792,2839307..2839414)) /locus_tag="PAL_GLEAN10017293" /codon_start=1 /product="Dihydropyrimidine dehydrogenase [NADP+]" /protein_id="ELK05814.1" /db_xref="InterPro:IPR017896" /db_xref="UniProtKB/Swiss-Prot:Q12882" /translation="MSSKDVEAVLAEESSVSGRMKAWWLQARVTISRGAAKLPSFGPY LEQRKKIIAENKIKLKEENAAFLPLKRNYFTPKKPIPTMKDVIGKALQYLGAFGELSN TEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTITDACTGCTLCLSVCPI IDCIKMVSRTTPYEPKRGLPLAVNPVC" assembly_gap 2817501..2817598 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2822669..2822683 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2907206..2907248 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2921549..2921598 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2924801..>3114397) /locus_tag="PAL_GLEAN10017294" mRNA complement(join(<2924801..2925007,2925951..2926130, 2957974..2958116,3019275..3019394,3020237..3020357, 3067305..3067388,3074100..3074168,3114215..>3114397)) /locus_tag="PAL_GLEAN10017294" /product="Dihydropyrimidine dehydrogenase [NADP+]" CDS complement(join(2924801..2925007,2925951..2926130, 2957974..2958116,3019275..3019394,3020237..3020357, 3067305..3067388,3074100..3074168,3114215..3114397)) /locus_tag="PAL_GLEAN10017294" /note="GO_function: GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]; GO_process: GO:0006222 - UMP biosynthetic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Dihydropyrimidine dehydrogenase [NADP+]" /protein_id="ELK05815.1" /db_xref="InterPro:IPR012135" /db_xref="UniProtKB/Swiss-Prot:Q28943" /translation="MSFAKKHKKGLKRMQANNAKAMSTCAEAIKALVKPKEVKPEVPK GGSSKLNRLAYIAHPKLIVIASIMCSYNRNDWMELSQMAETSGADALELNLSCPHGMG ERGMGLACGQDPELVRNICRWVRQSVQVPFFAKLTPNVTDIVSIAKAAKEGGADGVTA TNTVSGLMGLKADGTPWPAVGIGKRTTYGGVSGTAIRPIALKAVTSIARALPGFPILA TGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIEDYCTGLRALLYLKSIEELQDWD GQSPATVSHQKGKPVPQIPELTGKIAKSKSFLKNNVCDFKYSSEKEKGERNKILQCGF QENMVMNDSMRGNQTERLGDINIYNIVISKTVPK" assembly_gap 2941845..2941876 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2957860..2957913 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2985093..2985116 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2986359..2986379 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3036716..3036814 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3040805..3040816 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3058911..3059617 /estimated_length=707 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3063581..3063678 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3115191..>3655681) /locus_tag="PAL_GLEAN10017295" mRNA complement(join(<3115191..3115232,3130611..3130775, 3175802..3176017,3199537..3199721,3222509..3222719, 3235072..3235241,3236984..3237091,3318188..3318275, 3325310..3325391,3332914..3333110,3345586..3345747, 3364770..3364857,3435404..3435486,3483193..3483303, 3507254..3507294,3513784..3513806,3651032..3651084, 3655643..>3655681)) /locus_tag="PAL_GLEAN10017295" /product="Dihydropyrimidine dehydrogenase [NADP+]" CDS complement(join(3115191..3115232,3130611..3130775, 3175802..3176017,3199537..3199721,3222509..3222719, 3235072..3235241,3236984..3237091,3318188..3318275, 3325310..3325391,3332914..3333110,3345586..3345747, 3364770..3364857,3435404..3435486,3483193..3483303, 3507254..3507294,3513784..3513806,3651032..3651084, 3655643..3655681)) /locus_tag="PAL_GLEAN10017295" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Dihydropyrimidine dehydrogenase [NADP+]" /protein_id="ELK05816.1" /db_xref="InterPro:IPR009051" /db_xref="InterPro:IPR013027" /db_xref="UniProtKB/Swiss-Prot:Q12882" /translation="MLKNSDRDSFIDERASSKSSVHKDLFAPPERVFKGKRGKQMEES YPGRNAPSSILALNPRIQTHATLRSTSAKKLDKKHWKRNPDKNCFNCEKLENNFDDIK HTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAKMIFSDNP LGLSCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFAAEVFKAMNIPQIKNPSLPPP EKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLP YDVVNFETELMKDLGVKIICGKSLSVNEMTLRTLKEEGYKVAFIGIGLPEPNKDDIFQ GLTQDQGFYTSKDFLPLVAKGSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALR CGARRVFIVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAMQFVRT EQDETGKWNEDEDQLVHLKADVVISAFGSVLNDPKVKEALSPIKFNRWGLPEVNPETM QTSEPWVFAGGDIVGLANTTVESVNDGKQASWFIHKYIQSQYGTSVPAKPELPLFYTP VDLVDISVEMARLKFINPFGLASATPSTSASMIRRAFEAGWGFALTKTFSLDKDIVTN VSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIFSAFTNP IPRLL" assembly_gap 3115358..3115400 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3140639..3140703 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3150605..3151040 /estimated_length=436 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3165910..3166138 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3189532..3189570 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3200539..3200569 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3257958..3257983 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3278522..3278568 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3284803..3284820 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3287776..3287922 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3304929..3304957 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3352427..3352786 /estimated_length=360 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3368466..3368509 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3413600..3413650 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3415155..3415209 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3423689..3423789 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3426371..3426393 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3429256..3429331 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3432423..3432589 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3445946..3445976 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3474139..3474964 /estimated_length=826 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3497019..3497104 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3508653..3510183 /estimated_length=1531 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3522823..3522982 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3532981..3532991 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3640961..3640999 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3667126..3667163 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3682838..3686273 /estimated_length=3436 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3705217..3705298 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3706748..3706781 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3707512..3707707 /estimated_length=196 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3709536..3709575 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3718965..3718978 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3721515..3721544 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3754900..3754953 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3777733..3781109 /estimated_length=3377 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3788011..3788042 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3797473..3797501 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3812135..3812188 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3831137..3831175 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3838716..3838748 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3844733..3844751 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3897158..3897337 /estimated_length=180 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3898813..3898829 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3906540..3906583 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3908280..3908298 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3913036..3913285 /estimated_length=250 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3917046..3917078 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3921320..3921498 /estimated_length=179 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3965966..3965975 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3994654..3994704 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4005975..4006026 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4011357..4011405 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4028388..4028516 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4037774..>4104658 /locus_tag="PAL_GLEAN10017297" mRNA join(<4037774..4037953,4058736..4058918,4062766..4062876, 4063226..4063390,4065557..4065755,4070091..4070290, 4073063..4073149,4076842..4076907,4090005..4090157, 4104581..>4104658) /locus_tag="PAL_GLEAN10017297" /product="Sorting nexin-7" CDS join(4037774..4037953,4058736..4058918,4062766..4062876, 4063226..4063390,4065557..4065755,4070091..4070290, 4073063..4073149,4076842..4076907,4090005..4090157, 4104581..4104658) /locus_tag="PAL_GLEAN10017297" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0035091 - phosphoinositide binding [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]" /codon_start=1 /product="Sorting nexin-7" /protein_id="ELK05817.1" /db_xref="InterPro:IPR001683" /db_xref="UniProtKB/Swiss-Prot:Q9UNH6" /translation="MEGERRASPERSSGLPARGADGESPGGGGPLLRSRGSSALLQVD VLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQVKFEDEPDLKDLFITVDE PESHVTTIETFITYRIITKTSRGEFDSSDFEVRRRYQDFLWLKGKLEEAHPTLIIPPL PEKFIVRGMVERFNDDFIETRRKALQKFLNRIADHPTLTFNEDFKIFLTVQAWELSSH KKQGPGLLSKMGQTVRAVALSMRGVKSRPQQFMEMNDFIEIFSQKINLIDKISQRIYK EERDYFDEMREYGPIHILWSASEDDLADTLSGVASCIDTCCKATEKRMSGLSEALLPV VHEYVLYSEILMGVMKRRDQIQAELDSKVEALTYKKADADLTGSSESLDCEEVVLEES RFEIYLTEEIGKLEDKVECANNALKADWERWKQNMQNDIKSAFADMAEENIHYYEQCL ATWESFLTSQTDLHSEETSEDKP" assembly_gap 4069474..4069493 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4081544..4081622 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4121611..4121661 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4128232..4128262 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4164734..4164795 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4181318..>4254621) /locus_tag="PAL_GLEAN10017298" mRNA complement(join(<4181318..4181458,4184633..4184752, 4190924..4191100,4200287..4200373,4217639..4217889, 4221039..4221171,4254385..>4254621)) /locus_tag="PAL_GLEAN10017298" /product="Lipid phosphate phosphatase-related protein type 5" CDS complement(join(4181318..4181458,4184633..4184752, 4190924..4191100,4200287..4200373,4217639..4217889, 4221039..4221171,4254385..4254621)) /locus_tag="PAL_GLEAN10017298" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]" /codon_start=1 /product="Lipid phosphate phosphatase-related protein type 5" /protein_id="ELK05818.1" /db_xref="InterPro:IPR000326" /db_xref="UniProtKB/Swiss-Prot:Q32ZL2" /translation="MPPLPAALTSSMLYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFF CHDSAYRKPDPGPEDSSAVPPVLLYSLAAGVPVLVIIVGETAVFCLQLATRDFENQEK TILTGDCCYINPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYT ALGCQQYTQFISGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTVPIKYTEKKMD RYSRFSDFQMFKDLYPMPMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRN HWSDVIAGFLVGISIAVFLVVCVVNNFKGRQPENEHIRTDNLTQMPMISIPRAESPLE KAEHCPHHTQCVVGSPHSHRPQDHHASRRWQRNSGFPLELCCWEDVR" assembly_gap 4254763..4254913 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4274313..4274330 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4326924..4326943 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4354736..4355407 /estimated_length=672 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4388405..4388630 /estimated_length=226 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4396642..>4413059 /locus_tag="PAL_GLEAN10017299" mRNA join(<4396642..4396671,4396780..4396965,4403581..4403710, 4405876..4406071,4407711..4407768,4408512..4408685, 4411734..>4413059) /locus_tag="PAL_GLEAN10017299" /product="Lipid phosphate phosphatase-related protein type 4" CDS join(4396642..4396671,4396780..4396965,4403581..4403710, 4405876..4406071,4407711..4407768,4408512..4408685, 4411734..4413059) /locus_tag="PAL_GLEAN10017299" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]" /codon_start=1 /product="Lipid phosphate phosphatase-related protein type 4" /protein_id="ELK05819.1" /db_xref="InterPro:IPR000326" /db_xref="UniProtKB/Swiss-Prot:Q7Z2D5" /translation="MILTMKLERVLPILASSVVSLYFLELTDVFKPVHSGFSCYDRSL SMPYIEPTQEAIPFLMLLSLAFAGPAITIMVGEGILYCCLSKRRNGVGLEPNINAGGC NFNSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKE NSYIVEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNSTLTDSSKLLKPLL VFTFIICGIICGLTRITQYKNHPVDVYCGFLIGGGIALYLGLYAVGNFLPSEESMFQH REALRSLADLNQDPSRVLSAKNGSSSDGIAHTEGILNRNHRDASSLTNLKRANADVEI ITPRSPMGKENMVTFSNTLPRANTPSVEDPVRRNTTIHASMDSARSKQLLTQWKSKNE SRKLSLQVIETEPGQSPPRSIEMRSSSEPSRVGVNGDHHGPGNQYLKIQPGTVPGCNN SMPGGPRVSIQSRPGSSQLVHIPEETQENISTSPKSSSARAKWLKAAEKTVACNRSNS QPRIMQVIAMSKQQGVLQSSPKNTEGSTVSCTGSIRYKTLTDHEPSGIVRVEAHPENN RPIIQIPSTEGEGSGSWKWKAPEKGSLRQTYELNDLNRDSESCESLKDSFGSGDRKRS NIDNNEHHHHGITTIRVTPVEGSEIGSETVSISSSRDSTLRRKGNIILIPERSNSPEN TRNIFYKGTSPTRAYKD" assembly_gap 4413408..4413440 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4435546..4436558 /estimated_length=1013 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4437773..4437795 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4446774..4447402 /estimated_length=629 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4538624..4538669 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4586055..4586075 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4592759..4592775 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4597088..4597105 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4612354..4612371 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4613778..>4678755 /locus_tag="PAL_GLEAN10017300" mRNA join(<4613778..4614217,4636745..4636790,4650519..4650599, 4655930..4656054,4671151..4671265,4671397..4671430, 4671556..4671669,4673338..4674432,4678712..>4678755) /locus_tag="PAL_GLEAN10017300" /product="Palmdelphin" CDS join(4613778..4614217,4636745..4636790,4650519..4650599, 4655930..4656054,4671151..4671265,4671397..4671430, 4671556..4671669,4673338..4674432,4678712..4678755) /locus_tag="PAL_GLEAN10017300" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_process: GO:0008360 - regulation of cell shape [Evidence IEA]" /codon_start=1 /product="Palmdelphin" /protein_id="ELK05820.1" /db_xref="InterPro:IPR004965" /db_xref="UniProtKB/Swiss-Prot:Q2MJV9" /translation="MKQAETREGGKGLMEKVPEATLWGHVLRRPAGVLPVTCPQPPRC PRWCSDSPPVADVVATAASTGFPPLSGSISKKHSGTRPNADQLLPNQGHTSHLHLLAI MVTSSEVLLIVKKVLPKEAGRSSLLMAERIAWAREGKDRFTVNHIMEEAELVKERLQA ITDKRKIQEEISQKRLKIEEEKLKHQHLKKKALREKWLLDGISSGKEQEEMKRQNQQD QYQIQVLEQSILRLEKEIQDLEKAELKISTNEEAILKKLKSIERTTEDIIRSVKVEKE ETSRESIEDIYANIPDLPKSYIPSRLRKERNDGIEDDEQNRKALYAMEIKVKKDLKTG ESTVLSSIPLPSDDFKGTGIKVYDDGQKSVYAVSNNHSPPFNGTDGLAPVEVEELLRQ ASERNSKSPTEYHEPVYANPFCRPTTPQREKVTPGPNFQERIKMKANGLSNDMSEPIY HMDNGLTEERSNSFNHVSPVRPIPHPRSMTQQAEEMPCTLQKRLVTPWEESNIMQDKN APPSKARLSPSKALVGKSECQGSAPTCQEDEEDVRYNIVHSLPSDMNDREPVTMIFMG YQQAEDDEEEKKLLTGYDGIIHAELVVIDDEEEGEGETEKPSYHPTAPHSQVYQPTKP TPLPRKRSEVNPRENASHQSPHKNSISLKEQEESLGSPVRPSPLGVQTAGDGTEDPSL TALRMRMAKLGKKVI" assembly_gap 4633351..4633366 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4634045..4634097 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4636209..4636240 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4689326..>4721093) /locus_tag="PAL_GLEAN10017301" mRNA complement(join(<4689326..4689418,4689496..4689557, 4693099..4693242,4694088..4694146,4694399..4694496, 4696509..4696595,4698165..4698277,4699602..4699715, 4706039..4706186,4707525..4707623,4712265..4712447, 4715531..4715678,4718800..4718894,4719985..4720121, 4721000..>4721093)) /locus_tag="PAL_GLEAN10017301" /product="Ferric-chelate reductase 1" CDS complement(join(4689326..4689418,4689496..4689557, 4693099..4693242,4694088..4694146,4694399..4694496, 4696509..4696595,4698165..4698277,4699602..4699715, 4706039..4706186,4707525..4707623,4712265..4712447, 4715531..4715678,4718800..4718894,4719985..4720121, 4721000..4721093)) /locus_tag="PAL_GLEAN10017301" /codon_start=1 /product="Ferric-chelate reductase 1" /protein_id="ELK05821.1" /db_xref="InterPro:IPR002861" /db_xref="InterPro:IPR005018" /db_xref="InterPro:IPR006593" /db_xref="UniProtKB/Swiss-Prot:Q6ZNA5" /translation="MIPEHGHIPRSDPIHNISVSQMTFTSGDQIKVTLSGPEFKGFLL EARDANALSGPPIGFFKLIDSRVSQLLTCDDIQGSAVSHTNPHKKTEIKVYWKAPNDA PNHIRFLVTVVQKYKTYWVKIPGPVISQPNAPPFTTPEATVTPLSTLPPVSHLTKSFS ASDCGNKKFCVRSPLNCDPAKERACVFLSFTRDDQSVVVELSGPSRGYLSFAFSHDRW MGDDDAYVCIHEDQTVHIQPSYLTGRSHPVMNSKDTLEDMAWRLEDGVMQCSFRRNIT LPGDKNRFDLNTSYYIFLADGAADDGRIYKHSQHPLITYEKHDVTDHPKNVGGSRSLL LLKAHGALMFVAWMTTVSIGVIIARFFKPVWSKTLFGESAWFQVHRMLMLTTSALTGI AFVLPFIYRGGWSWHAGCHPYLGCIVMILAVLQPLLAAFRPPLYHQRRELFNWTHWGL GTAARIIAVAAMFLGIDLPGLNLPGSWKTYAMIGFVAWHVGTEVILEIHAYRLSRKIE ILDDARIQILQSFTVAEAEGYAFKKAVLAIYVCGNVAFLILFLSNINHL" assembly_gap 4690729..4690923 /estimated_length=195 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4705568..4705598 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4712463..4712473 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4740499..4740529 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4742762..4742783 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4756562..4756645 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4766289..4766309 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4766674..>4818959 /locus_tag="PAL_GLEAN10017302" mRNA join(<4766674..4766755,4775536..4775746,4776290..4776456, 4777317..4777520,4786557..4786680,4788246..4788385, 4789447..4789634,4791449..4791572,4792157..4792320, 4792607..4792708,4793078..4793228,4795245..4795369, 4795460..4795572,4795687..4795821,4798457..4798587, 4799712..4799844,4801652..4801925,4802179..4802312, 4803167..4803342,4806192..4806294,4809097..4809322, 4810538..4810649,4812737..4812872,4813862..4813974, 4814798..4815009,4816210..4816307,4817773..4817860, 4817971..4818104,4818887..>4818959) /locus_tag="PAL_GLEAN10017302" /product="Glycogen debranching enzyme" CDS join(4766674..4766755,4775536..4775746,4776290..4776456, 4777317..4777520,4786557..4786680,4788246..4788385, 4789447..4789634,4791449..4791572,4792157..4792320, 4792607..4792708,4793078..4793228,4795245..4795369, 4795460..4795572,4795687..4795821,4798457..4798587, 4799712..4799844,4801652..4801925,4802179..4802312, 4803167..4803342,4806192..4806294,4809097..4809322, 4810538..4810649,4812737..4812872,4813862..4813974, 4814798..4815009,4816210..4816307,4817773..4817860, 4817971..4818104,4818887..4818959) /locus_tag="PAL_GLEAN10017302" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004135 - amylo-alpha-1,6-glucosidase activity [Evidence IEA]; GO_process: GO:0005978 - glycogen biosynthetic process [Evidence IEA]" /codon_start=1 /product="Glycogen debranching enzyme" /protein_id="ELK05822.1" /db_xref="InterPro:IPR008928" /db_xref="InterPro:IPR010401" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/Swiss-Prot:P35573" /translation="MGHGKQIRILLLNEMEKLEKTLFRLEQGFELQFRLGPTLQGKTV TVHTNYPYPGETFNREKFRSLEWENPSEREDDSDKYCKLNLQQAGSFQYYFLRGNEKS GGGYIVVDPVLRVGTDNHVLPLDCVTLQTFLAKCLGPLDEWESRLRVAKESGYNMIHF TPLQTLGQSRSCYSLADQLELNPDFSRPNKKCTWDDVGQLVEKLKKEWNILCITDVVY NHTGNRKITKPDPKEHLKIIQDPEYRRLGCTVDMNIALATFIPNEYFTFPFEEMTLST EESMIHLPNKACFLMAHNGWVMGDDPLRNFAEPGSDVYLRRELICWGDSVKLRYGNKP EDCPYLWAHMKKYTEITATYFQGVRLDNCHSTPLHVAEYMLDAARKLQPNLYIVAELF TGSEDLDNVFVTRLGISSLIREAMSAHDSHEEGRLVYRYGGEPVGSFVQPCLRPLMPA IAHALFMDITHDNECPIVHRSAYDALPSSMIVSMACCASGSTKGYDELVPHQVYVDQV DEDIVAVTRHSPSIHQSVVAVSRTAFKNPKTSFYSKEVPQMCIPGKIEEVVLEARTIE RNTKPYKRDENSINGMPDITAEIREHIQLNESKIVKQAGIATKGPNEYIQEIEFENLS PGSVIVFRVSLDPHAQVAVGILRNHLTQFSPHFKSGSLSADSSDPILKIPFAYIASKL TLAELNQILYRCESEEQEDGGGCYNIPNWSSLKYAGLQENSSLELAPYVGFGGGCGAA PAGLNRGGGVRSDQASLERFLTTLLATVDYTALVSTSVCSPHITGHEQQPRLWERIAS ANNIACYFYDFSGLMSVLAEMRPKNDLGHPFCDNLRSGDWMIDYVSNRLISRSGTIAE VGRWLQAMFFYLKQIPRYLIPCYFDAVLIGAYTTLLDTAWKQMSSFVQNGSTFVKHLS LGSVQLCGVGKYASLPLLSPSLMDVPYRLNEITKEKEQCCVTLAAGLPHFSSGIFRCW GRDTFIALRGILLITGRYLEARNIILAFAGTLRHGLIPNLLGEGTYARYNCRDAVWWW LQCIQDYCKVVPNGLDILKCPVSRMYPTDDSVPLSAGTVDQPLFEVIQEAMQRHMQGI QFRERNAGPQIDRNMKDEGFNITVGVDEETGFVYGGNRFNCGTWMDKMGESDRARNRG IPATPRDGSAVEIVGLSKSAIRWLLELSKKNIFPYHEVTVKRDGKVVTVSYDEWNRKI QDNFEKLFYVSEDPSDFNEKNPNLVHKRGIYKDSYGASSPWCDYQLRPNFTIAMVVAP ELFTTEKAWKALQVAEKKLLGPLGMKTLDPDDMVYCGVYDNALDNDNYNLAKGFNYHQ GPEWLWLIGYFLRAKLYFSKLMGPETNAKTIFLVKNVLSRHYVHLESLACFALTTLLQ LLNKILSASQIP" assembly_gap 4788415..4788424 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4789895..4789963 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4796253..4796287 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4826990..4827014 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4846337..4846521 /estimated_length=185 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4847545..4847555 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4859317..>4872063 /locus_tag="PAL_GLEAN10017303" mRNA join(<4859317..4859521,4863599..4863753,4863830..4863952, 4865565..4865736,4868011..4868129,4869650..4869783, 4871973..>4872063) /locus_tag="PAL_GLEAN10017303" /product="UDP-N-acetylglucosamine transporter" CDS join(<4859317..4859521,4863599..4863753,4863830..4863952, 4865565..4865736,4868011..4868129,4869650..4869783, 4871973..4872063) /locus_tag="PAL_GLEAN10017303" /note="GO_component: GO:0000139 - Golgi membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005351 - sugar:hydrogen symporter activity [Evidence IEA]; GO_process: GO:0008643 - carbohydrate transport [Evidence IEA]" /codon_start=1 /product="UDP-N-acetylglucosamine transporter" /protein_id="ELK05823.1" /db_xref="InterPro:IPR007271" /db_xref="UniProtKB/Swiss-Prot:Q6YC49" /translation="ADEDKTMSANLKYLSLGILVFQTTSLVLTMRYSRTLKEEGPRYL SSTAVVVAELLKIMACILLVYKDSKCSLRALNRTLHDEILNKPMETLKLAIPSGIYTL QNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVAFV QWPSDSQELDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQL GFFGSIFGLMGVYIYDGELVSKNGFFQGYNRMTWIVVVLQALGGLVIAAVIKYADNIL KGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVIAATFLYGYDPKPAGNPTKA" assembly_gap 4883686..4883896 /estimated_length=211 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4902835..4903027 /estimated_length=193 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4915293..>4949672) /locus_tag="PAL_GLEAN10017305" mRNA complement(join(<4915293..4915399,4915497..4915591, 4916983..4917080,4928232..4928360,4930231..4930367, 4931025..4931106,4931480..4931659,4931737..4931826, 4931931..4932125,4934727..4934918,4938791..4938910, 4939769..4939834,4940472..4940643,4941547..4941651, 4942067..4942146,4947460..4947595,4949386..>4949672)) /locus_tag="PAL_GLEAN10017305" /product="Spindle assembly abnormal protein 6 like protein" CDS complement(join(4915293..4915399,4915497..4915591, 4916983..4917080,4928232..4928360,4930231..4930367, 4931025..4931106,4931480..4931659,4931737..4931826, 4931931..4932125,4934727..4934918,4938791..4938910, 4939769..4939834,4940472..4940643,4941547..4941651, 4942067..4942146,4947460..4947595,4949386..4949672)) /locus_tag="PAL_GLEAN10017305" /codon_start=1 /product="Spindle assembly abnormal protein 6 like protein" /protein_id="ELK05824.1" /db_xref="UniProtKB/Swiss-Prot:Q6UVJ0" /translation="MPGTTTPRPAKPEKADGGWRGPNLLRLPSIFFPASSAEAERQTQ TLAGLVQLSGQPRPSGLLDFSAHPPGQRSNMSQVLFQQLVPLQVKCKDCEERSGSFLG LMAPGYSLLDNCRNRPLEVSHKFQQTYRNVSSLFSADTQDLVIRLTDDTDPFFLYILV ISEEDFQSLKFQQGLLVDFLAFPQKFIDLLQQCTQEHAKEIPRFLLQLVSPAAVLDNS PAFLNVVETNPFKHLTHLSLKLLPGSDVEIKKFLAGCLKCSKEEKLSLTQSLEDVTRQ LNFAQKTLSEKIQELDKLRNEWASHTAALSNKHSQELTNEKEKALQAQVQYQQQHEQQ KKDLEILHQRNVQQLQNRLSELEATNKDLTERKYKGDSSIRELKAKLSGVEEELQRTK QEVLSLRRENSTLDAECHEKEKHINQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQ KVALEENGEKNQVQLGKLEATIKSLSTELLKANEIIKKLQGDLKTLMGKLKLKNTVTI QQEKLLAEKEEKLQKEQKELQDVGQSLRNKEQEVCRLQEQLEATVQKLEESKQLLKNN EKLITWLNKELNENQLVRKQDVLGPSATPPVHSSSNAIRSGISPNPNVVDGRLAYPAC GIGYPVSSAFAFQNTFPHPLSAKNAIHSVSGPKVQFNLQFTKPNTSPGDVQSGTTVSM PRSTDKENGENLGLESKYLKKREDSIPLRGLSQNLFSNPDHQKGGPLGALQAPSKPAA LPSTSSAYFPGQLPNS" assembly_gap 4949703..4949724 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4949777..>4967885 /locus_tag="PAL_GLEAN10017306" mRNA join(<4949777..4949923,4952343..4952389,4952472..4952538, 4957970..4958032,4958219..4958288,4958446..4958552, 4958908..4959075,4960938..4961010,4964040..4964114, 4966985..4967417,4967690..>4967885) /locus_tag="PAL_GLEAN10017306" /product="tRNA guanosine-2'-O-methyltransferase TRM13 like protein" CDS join(4949777..4949923,4952343..4952389,4952472..4952538, 4957970..4958032,4958219..4958288,4958446..4958552, 4958908..4959075,4960938..4961010,4964040..4964114, 4966985..4967417,4967690..4967885) /locus_tag="PAL_GLEAN10017306" /note="GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]" /codon_start=1 /product="tRNA guanosine-2'-O-methyltransferase TRM13 like protein" /protein_id="ELK05825.1" /db_xref="InterPro:IPR007871" /db_xref="InterPro:IPR021721" /db_xref="InterPro:IPR022776" /db_xref="UniProtKB/Swiss-Prot:Q9NUP7" /translation="MASSAPTPHATGFPAEGRCGYYVEKKKRFCRMVVAAGKRFCGEH AGAAEEENTRKRILCPLDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLTDET EVPEQLVPISSLSEEQLENLIKKLRKASEGLSSTLKDQIMSHPALHDALNDPKNGDSA TKHLKQQASILGNIEKLKLLGPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKV TTRFKVDGKHRKKNSVFERLQIDIQHLCLNKIPVLSKEKLPVVGIGKHLCGVATDLAL RCLVETYAASCEERNEEPLAKRIKNDKTEKEINTLAKEGNEKSVPEKWTPVAGIVIAL CCHHRCDWRHYVGKEYFKALGLGAVEFHYFQRMSSWATCGMRKTSLDASNITTKRKDH QNDDGEEHDDGGYRITDDSVESLPGFLTVEEKKKIGHLCKLLIDQGRIEYLQQKRFSP ALQYYTDPLVSLENVLLTALPNHSSSPETTT" assembly_gap 4951140..4951164 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4968112..>4992082) /locus_tag="PAL_GLEAN10017307" mRNA complement(join(<4968112..4968167,4970960..4971096, 4972240..4972392,4973147..4973292,4976151..4976287, 4976867..4977023,4992053..>4992082)) /locus_tag="PAL_GLEAN10017307" /product="Leucine-rich repeat-containing protein 39" CDS complement(join(4968112..4968167,4970960..4971096, 4972240..4972392,4973147..4973292,4976151..4976287, 4976867..4977023,4992053..4992082)) /locus_tag="PAL_GLEAN10017307" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Leucine-rich repeat-containing protein 39" /protein_id="ELK05826.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="UniProtKB/Swiss-Prot:Q96DD0" /translation="MAKDLTVCSCTLPSSLLKLNQLQGWQLHRIGLLKIPEFIGRFQN LIILDLSRNTISEIPRGIGLLTRLQELILSYNKIKTVPKELSNCVSLEKLELAVNRDI SDLPQELGSLIKLTHLDLSMNHFTTIPSAVLNMPALEWLDLGSNRLEQLPDTIERMQN LHTLWLQRNEITCLPETISNMKNLGTLVLSNNKLQDIPLCMEEMTNLRFVNFRDNPLK LEVTLSPSEGIEEEEEELFGLQFMHTYIQESRSRADNQVNCSTTSPISINTDG" assembly_gap 4980191..4984021 /estimated_length=3831 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4996232..4996247 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5003045..>5034231) /locus_tag="PAL_GLEAN10017308" mRNA complement(join(<5003045..5003212,5005547..5005618, 5005753..5005944,5011277..5011354,5019801..5019967, 5020590..5020806,5023411..5023532,5026412..5026593, 5027671..5027746,5030998..5031121,5034181..>5034231)) /locus_tag="PAL_GLEAN10017308" /product="Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial" CDS complement(join(5003045..5003212,5005547..5005618, 5005753..5005944,5011277..5011354,5019801..5019967, 5020590..5020806,5023411..5023532,5026412..5026593, 5027671..5027746,5030998..5031121,5034181..5034231)) /locus_tag="PAL_GLEAN10017308" /note="GO_function: GO:0008415 - acyltransferase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial" /protein_id="ELK05827.1" /db_xref="InterPro:IPR000089" /db_xref="InterPro:IPR001078" /db_xref="InterPro:IPR004167" /db_xref="InterPro:IPR011053" /db_xref="UniProtKB/Swiss-Prot:P11181" /translation="MAAVRVLRTWSRRAGRLICVHYFETCSNIHVLKPKYVCFFGYPS FKYSHPHRLLKTTAALQGQIVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQ SDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETEAFKDSEEDVVETPAVSHDE HTHQEIKGQKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILP PSPKAEIMSSPPKPKDRTIPTPISKPLVFTGKDRTEPIKGFQKAMVKTMSAALKIPHF GYCDEVDLVELVKLREELQPIASARGIKLSFLPFFLKAASLGLLQFPILNASVDENCQ NITYKSSHNIGIAMDTEQGLIVPNVKNVQICSIFEIATELNRLQKLGSAGQLNTTDLK GGTFTLSNIGSIGGTYTKPVILPPEVAVGALGSIKALPRFNQKGEVYKAQIMNVSWSA DHRIIDGATMSHFSNLWKSYLENPALMLLDLK" assembly_gap 5006122..5010059 /estimated_length=3938 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5016521..5018024 /estimated_length=1504 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5037997..>5054279 /locus_tag="PAL_GLEAN10017310" mRNA join(<5037997..5038041,5038157..5038257,5039941..5040084, 5043263..5043386,5045877..5045935,5047220..5047361, 5047621..5047745,5048628..5048686,5049512..5049606, 5051661..5051765,5054178..>5054279) /locus_tag="PAL_GLEAN10017310" /product="RNA 3'-terminal phosphate cyclase" CDS join(5037997..5038041,5038157..5038257,5039941..5040084, 5043263..5043386,5045877..5045935,5047220..5047361, 5047621..5047745,5048628..5048686,5049512..5049606, 5051661..5051765,5054178..5054279) /locus_tag="PAL_GLEAN10017310" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0016886 - ligase activity, forming phosphoric ester bonds [Evidence IEA]; GO_process: GO:0006396 - RNA processing [Evidence IEA]" /codon_start=1 /product="RNA 3'-terminal phosphate cyclase" /protein_id="ELK05828.1" /db_xref="InterPro:IPR000228" /db_xref="InterPro:IPR013791" /db_xref="InterPro:IPR013792" /db_xref="InterPro:IPR013796" /db_xref="UniProtKB/Swiss-Prot:Q2HJ88" /translation="MAGQRVEVDGGIMEGGGQILRVSTALSCLLGLPVRVQKIRAGRS TPGLRPQHLSGLEMIRDLCDGQLEGAEIGSTEIRFTPEKIKGGIHTADTKTAGSVCLL MQVSMPCVLFAAFPSELRLKGGTNAEMAPQIDYTEMVFKPIVEKFGFRFNCDIKMRGY YPKGGGEVIVRMSPVKQLNPINLTDRGSVTKIYGRAFVAGVLPFKVAKEMASAAVRCI RKEIRDLYVNIQPVQEPKDQAFGSGNGIIIIAETSTGCLLAGSSLGKRGVNADKVGIE AAEMLLANLRHGGAVDEYLQDQLIIFMALANGVSRIKTGPVTLHTQTAIHFAEQLAKA QFTVKKSENEDDASKDTYIIECQGIGMTNPHL" assembly_gap 5053426..5053438 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5083246..5083318 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5084598..>5200234 /locus_tag="PAL_GLEAN10017311" mRNA join(<5084598..5084646,5085442..5085532,5102705..5102780, 5113802..5113894,5134850..5134929,5149596..5149662, 5152807..5152869,5161836..5161923,5171452..5171682, 5178486..5178624,5189744..5189903,5195051..5195166, 5196919..5196966,5198981..5199106,5199790..>5200234) /locus_tag="PAL_GLEAN10017311" /product="Dual specificity protein phosphatase CDC14A" CDS join(5084598..5084646,5085442..5085532,5102705..5102780, 5113802..5113894,5134850..5134929,5149596..5149662, 5152807..5152869,5161836..5161923,5171452..5171682, 5178486..5178624,5189744..5189903,5195051..5195166, 5196919..5196966,5198981..5199106,5199790..5200234) /locus_tag="PAL_GLEAN10017311" /note="GO_function: GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA]; GO_function: GO:0016791 - phosphatase activity [Evidence IEA]; GO_process: GO:0006470 - protein dephosphorylation [Evidence IEA]; GO_process: GO:0016311 - dephosphorylation [Evidence IEA]" /codon_start=1 /product="Dual specificity protein phosphatase CDC14A" /protein_id="ELK05829.1" /db_xref="InterPro:IPR000340" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR020422" /db_xref="UniProtKB/Swiss-Prot:Q9UNH5" /translation="MAAESGELIGACEFMKDRLYFATLRNRPKSTVNIHYFSIDEELV YENFYADFGPLNLAMVYRYCCKLNKKLKSYSLSRKKIVHYTCFDQRKRANAAFLIGAY AVIYLKKTPEEAYRALLSGSNSPYLPFRDASFGNCTYNLTILDCLQGIRKGLQHGFFD FETFDVDEYEHYERVENGDFNWIVPGKFLAFSGPHPKSKIENGYPLHAPEAYFPYFKK HNVMAIVRLNKKIYEAKRFTDAGFEHYDLFFIDGSTPSDTIVRRFLNICENTEGAIAV HCKAGLGRTGTLIACYVMKHYRFTHAEIIAWIRICRPGSIIGPQQHFLEEKQASLWVQ GDIFRSKLKSRPSSEGSINKILSSLDDMSIGGNLSKIQNVERFGENNLEEDEDVEMKN SITQGDKLRALKSQRQPRSSPSSAFRLDDIKGHPRAASQPFRLSSSPQGSASTLKTAK AASSPSVTAKRINRGSLSSGGAGVRSFSINSRLANSLGNLNAAADDPESKKTSSSKAG FVASPFTNLLNGSSQPPARNYPELNNNQYSRSSSSGSTLSSQPGPLGAKSEEQATVLR PSYAGLSSSSARFLSRSIPVSSQTPPLGPQNPEGNFCASPSPPRLPPKKFNSAKEAF" assembly_gap 5103357..5103374 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5165718..5168625 /estimated_length=2908 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5171171..5171195 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5206084..5206230 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5232123..5233071 /estimated_length=949 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5289097..5289164 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5322497..>5337978 /locus_tag="PAL_GLEAN10017312" mRNA join(<5322497..5322560,5323096..5323371,5325653..5325973, 5327094..5327360,5329195..5329470,5331516..5331836, 5332662..5332928,5334052..5334318,5337818..>5337978) /locus_tag="PAL_GLEAN10017312" /product="Vascular cell adhesion protein 1" CDS join(5322497..5322560,5323096..5323371,5325653..5325973, 5327094..5327360,5329195..5329470,5331516..5331836, 5332662..5332928,5334052..5334318,5337818..5337978) /locus_tag="PAL_GLEAN10017312" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007155 - cell adhesion [Evidence IEA]; GO_process: GO:0016337 - cell-cell adhesion [Evidence IEA]" /codon_start=1 /product="Vascular cell adhesion protein 1" /protein_id="ELK05830.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003987" /db_xref="InterPro:IPR003989" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008424" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013151" /db_xref="UniProtKB/Swiss-Prot:Q28260" /translation="MPGKMVVIFGALNVLWMVFAASQAFKIEIFPESKIVAQIGASVS LTCSTTGCESPSFSWRTQIDSPLNAKVRNEGTTSTLTMDPVSFENEHSYLCTATCGSG KEEKGIEVRIYSFPKDPEIYLSGPLEAGKPVTVTCLVPDVYPFDRLEMDLLKDNQNLK SQNFLEPTEKKSLETKSLEVTFIPTNEDTGKALVCRAKLLIDEIEIHFEEREATEKLQ VYIAPRDTMISVNPSTRLQEGGSVTMTCSSEGLPAPQILWSKKLDNRNLQLLSENATL TLIAMRMEDSGIYVCEGVNMIGRNRKEVELIVQEKPFTVEISPGPKIAAQVGDSVVLT CGVTGCESPSFSWRTQIDSPLSGKVSSEGTTSTLTLNPVSFENEHSYLCTVTCGHKKL EKGIKVDLYSFPRDPEIETSGLLVDGNPVTISCKVPHVYPLDRLEIELLKGESVMKSK NFLEDMHKKSLETKSLEMTFIPTTEDTGKVFVCQAKLNIDEMEFEPKQRQSTQTFYVN VAPRNTTILVSPSFTVKEGSSVNITCSSNGLPAPKILLSRQLNNGDLQPLSENTTLTL ISTKMEDSGIYVCEGINQAGVSRKEVELVIQVAPKDIKLIAFPSESVKEGETVIISCT CGNVPKTWIILKKKEETGDTVLKSTDGAYTIHKAQLEDAGVYECESKNEVGLQLRSIT LDVKGRESNKDYFSPELLMLYCASSLIIPAIGMIIYFARKANMKGSYSLVEAQKSKV" assembly_gap 5330211..5330368 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5365574..5365613 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5380824..5380843 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5407343..5408383 /estimated_length=1041 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5410627..>5417673) /locus_tag="PAL_GLEAN10017313" mRNA complement(join(<5410627..5411115,5413388..5413458, 5414102..5414529,5417504..>5417673)) /locus_tag="PAL_GLEAN10017313" /product="Exostosin-like 2" CDS complement(join(5410627..5411115,5413388..5413458, 5414102..5414529,5417504..5417673)) /locus_tag="PAL_GLEAN10017313" /note="GO_component: GO:0031227 - intrinsic to endoplasmic reticulum membrane [Evidence IEA]; GO_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA]" /codon_start=1 /product="Exostosin-like 2" /protein_id="ELK05831.1" /db_xref="InterPro:IPR015338" /db_xref="UniProtKB/Swiss-Prot:Q9ES89" /translation="MRASLQVPNLNCKVRNQELRYTHTGHFSKKVETTENKLYEAVLY KEQWLCAVSIPWLCCHICKLPGRVMGIRALRFSLVVVLVLLLVAGALTTLLPNVKEDK MLTLRREIKPQGKSTLDSFTLIMQTYNRTDLLLRLLNHYQAVPHLHKVIVVWNNVGEK GPEELWSSVGPHPVPVIFKLQTTNRMRNRLQVFPELETKAVLMVDDDMLISAQDLLFA FSVWQQFPDQIVGFVPRKHVSTSSGVYSYGGFELQTPGFGNGDQYSVVLIGASFFNSK YLELFQRQPAAVHALIDETQNCDDIAMNFIIAKHTGKPSGIFVKPINMANLEKETNGG HSGMWHRAEHFLQRSYCLNKLVSIYDGMPLKYSNIMISQFGFPYANHKSKM" assembly_gap 5415843..5415863 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5430775..>5490730 /locus_tag="PAL_GLEAN10017314" mRNA join(<5430775..5430854,5431075..5431176,5437170..5437283, 5441151..5441238,5441898..5442024,5444972..5445121, 5448571..5448621,5451489..5451624,5469311..5469401, 5475375..5475524,5490533..>5490730) /locus_tag="PAL_GLEAN10017314" /product="Zinc transporter 7" CDS join(5430775..5430854,5431075..5431176,5437170..5437283, 5441151..5441238,5441898..5442024,5444972..5445121, 5448571..5448621,5451489..5451624,5469311..5469401, 5475375..5475524,5490533..5490730) /locus_tag="PAL_GLEAN10017314" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO_process: GO:0006812 - cation transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Zinc transporter 7" /protein_id="ELK05832.1" /db_xref="InterPro:IPR002524" /db_xref="UniProtKB/Swiss-Prot:A4IFD7" /translation="MLPLSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCL NLSFAFVELLYGIWSNCLGLISDSFHMFFDSTAILAGLAASVISKWRDNDAFSYGYVR AEVLAGFVNGLFLIFTAFFIFSEGVERALAPPDVHHERLLLVSILGFVVNLIGIFVFK HGGHGHSHGSGHGHSHSLFNGALDQAHGHGDHCHSHELKHGAAHSHDHAHGHGHGHFH SHDGTSLKETAGPSRQILQGVFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILI AMLIVVSVIPLLRESVGILMQRTPPLLENTLPQCYQRVQQLQGVYSLQDQHFWTLCSD VYVGTLKLVVAPDADARWILSQTHNIFTQYFIDDGMLSLGGTVWLPVYSMPSSRHLYF RPCLPHSHPPPAKIIPAMHGRKSKKFLLNQTFARAF" assembly_gap 5458471..5458502 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5464312..5464327 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5481467..5481504 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5496200..>5521465) /locus_tag="PAL_GLEAN10017315" mRNA complement(join(<5496200..5496423,5497895..5497998, 5499446..5499485,5504279..5504399,5510694..5510802, 5516884..5517008,5521331..>5521465)) /locus_tag="PAL_GLEAN10017315" /product="Diphthine synthase" CDS complement(join(5496200..5496423,5497895..5497998, 5499446..5499485,5504279..5504399,5510694..5510802, 5516884..5517008,5521331..5521465)) /locus_tag="PAL_GLEAN10017315" /note="GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Diphthine synthase" /protein_id="ELK05833.1" /db_xref="InterPro:IPR000878" /db_xref="UniProtKB/Swiss-Prot:Q9H2P9" /translation="MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEV LEEFYGRKLILADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLG ISYRVIHNASIMNAVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGLHTL CLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQNQRTRGEEPAVTEETL CVGLARVGAEDQKIAAGTLQQMCTVDLGGPLHSLVITGGSVHPLEMEMLSLFSIPEAS SESRSIDGL" assembly_gap 5512139..5512152 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5526735..5526761 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5532009..5532039 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5537857..5537900 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5570234..5570248 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5603349..5604934 /estimated_length=1586 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5657375..5657416 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5659142..>5660971 /locus_tag="PAL_GLEAN10017317" mRNA join(<5659142..5659285,5660858..>5660971) /locus_tag="PAL_GLEAN10017317" /product="hypothetical protein" CDS join(5659142..5659285,5660858..5660971) /locus_tag="PAL_GLEAN10017317" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05834.1" /translation="MELRLRREETPTGVSLESDAVRRGQQQDDERAVETRSSPSATLS RLSEAAVSEALFSQEKDTWKAWISLIEAPTAASKGSLGLAL" gene <5661019..>5662167 /locus_tag="PAL_GLEAN10017318" mRNA <5661019..>5662167 /locus_tag="PAL_GLEAN10017318" /product="Sphingosine 1-phosphate receptor 1" CDS 5661019..5662167 /locus_tag="PAL_GLEAN10017318" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0001619 - lysosphingolipid and lysophosphatidic acid receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Sphingosine 1-phosphate receptor 1" /protein_id="ELK05835.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000987" /db_xref="InterPro:IPR004061" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:P21453" /translation="MGSTSIPLVKALRSSVSDYVNYDIIVRHYNYTGKLNLGTDKDSG IKVTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYAINL LFSGANTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLKMKLHNESNSSRS FLLISACWIISLILGGLPIMGWNCISLLPSCSTVLPLYHKHYILFCTTVFTVLLLSIV ILYCRIYSLVRTRSRRLTFRKNTSKASRSSEKSLALLKTVIIVLSVFIACWAPLFILL LLDVGCKVKTCDILFKVEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIKIMSCCKCPRG DTTGKFKRPIIAGVEFSRSKSDNSSHPQKDDGDNPETIMSSGNVNSSS" assembly_gap 5671687..5671719 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5685894..5685977 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5688584..5688639 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5712780..5712791 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5725124..5725190 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5749644..5750040 /estimated_length=397 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5776227..5777730 /estimated_length=1504 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5780779..5780804 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5801786..5801824 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5822167..5822196 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5849374..5849398 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5898604..5898646 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5926788..5928901 /estimated_length=2114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5946737..5946750 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5972981..5973083 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6029625..6029658 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6030047..>6066525) /locus_tag="PAL_GLEAN10017320" mRNA complement(join(<6030047..6030724,6031791..6031897, 6047065..6047284,6057038..6057184,6066397..>6066525)) /locus_tag="PAL_GLEAN10017320" /product="Noelin-3" CDS complement(join(6030047..6030724,6031791..6031897, 6047065..6047284,6057038..6057184,6066397..6066525)) /locus_tag="PAL_GLEAN10017320" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Noelin-3" /protein_id="ELK05836.1" /db_xref="InterPro:IPR003112" /db_xref="InterPro:IPR022082" /db_xref="UniProtKB/Swiss-Prot:Q96PB7" /translation="MSSPLLKLGAVLSTMAMISNWMSQTLPSLVGLNSTRLSTTDALT QISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLLEKELKEKMDELL PLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELHQRVLSLETRLRD CMKKLTCGKLMKITGPITVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYK SIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSL EYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWN TGYPKRSAGESFMICGTLYVTNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFHISML DYNARDRALYAWNNGHQVLFNVTLFHIIKTEDDT" assembly_gap 6041302..6041361 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6051348..6051388 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6088408..6088433 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6101703..6101737 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6112549..6112587 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6127844..6128373 /estimated_length=530 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6221086..6221208 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6232514..6233199 /estimated_length=686 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6248000..6248010 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6315575..6318630 /estimated_length=3056 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6327964..6327997 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6338339..6338349 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6410920..6411387 /estimated_length=468 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6420654..6420679 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6461834..6461878 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6533671..6533696 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6540596..6540799 /estimated_length=204 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6541086..>6680454) /locus_tag="PAL_GLEAN10017321" mRNA complement(join(<6541086..6541232,6542441..6542674, 6544571..6544639,6546044..6546156,6548656..6548905, 6550351..6550452,6550687..6550740,6551181..6551288, 6552424..6552477,6558336..6558389,6558887..6558994, 6569607..6569660,6570667..6570720,6571666..6571773, 6572308..6572421,6577026..6577079,6578261..6578356, 6579928..6579981,6583606..6583713,6585378..6585431, 6586344..6586451,6590471..6590578,6605002..6605091, 6605467..6605574,6608232..6608285,6611662..6611715, 6616754..6616807,6623328..6623381,6626772..6626879, 6628552..6628605,6631640..6631684,6634125..6634178, 6638895..6638999,6639525..6639578,6640348..6640401, 6643155..6643208,6645914..6645967,6648798..6648854, 6650926..6651009,6652123..6652197,6652847..6652909, 6653856..6653897,6655370..6655432,6656177..6656431, 6658274..6658366,6658974..6659090,6662976..6663104, 6680335..>6680454)) /locus_tag="PAL_GLEAN10017321" /product="Collagen alpha-1(XI) chain" CDS complement(join(6541086..6541232,6542441..6542674, 6544571..6544639,6546044..6546156,6548656..6548905, 6550351..6550452,6550687..6550740,6551181..6551288, 6552424..6552477,6558336..6558389,6558887..6558994, 6569607..6569660,6570667..6570720,6571666..6571773, 6572308..6572421,6577026..6577079,6578261..6578356, 6579928..6579981,6583606..6583713,6585378..6585431, 6586344..6586451,6590471..6590578,6605002..6605091, 6605467..6605574,6608232..6608285,6611662..6611715, 6616754..6616807,6623328..6623381,6626772..6626879, 6628552..6628605,6631640..6631684,6634125..6634178, 6638895..6638999,6639525..6639578,6640348..6640401, 6643155..6643208,6645914..6645967,6648798..6648854, 6650926..6651009,6652123..6652197,6652847..6652909, 6653856..6653897,6655370..6655432,6656177..6656431, 6658274..6658366,6658974..6659090,6662976..6663104, 6680335..6680454)) /locus_tag="PAL_GLEAN10017321" /note="GO_component: GO:0005581 - collagen [Evidence IEA]; GO_function: GO:0005201 - extracellular matrix structural constituent [Evidence IEA]" /codon_start=1 /product="Collagen alpha-1(XI) chain" /protein_id="ELK05837.1" /db_xref="InterPro:IPR000885" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR008985" /db_xref="UniProtKB/Swiss-Prot:Q61245" /translation="MIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQ QLLITGDPKAAYDYCEHYSPDCDSSAPKAAQAQEPQVDEYAPEDIMEYDYEYGEAEYK EAESVTERPTVAEETIAQTEANIVDDFQEYNYGTVESYQTEAPRRVSGTNEPNPVEEV FTEEYLTGEDYDSQRKNSEDTLYENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKQTS PTNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLM GPPGLQGPSGPPGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTVSA QEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGRPGADGG RGMPGEPGAKGPRGLLGPRGTPGPIGQPGPQGEPGPPGQQGNPGPQGLPGPQGPIGPP GEKVSYSVLVLSGEHVWVVNLWQGPQGKPGLAGLPGADGPPGADGVRGLKGSKGEKGE DGFPGFKGDMGLKGDRGEVGQLGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP GLPGYPGRQGPKGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPG PGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKDGP AGLRGFPGERGLPGAQGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGGDGEPGPRG QQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGP NGADVRTVKYKLIIEVIQGPQGPPGSIGSVGGVGEKGEPGEAGNPGPPGEAGTGVSAV GCQCAVQKLLLKHFKHGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGQDGVG GDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGEAGAEGPPGKTGPVGPQGPAGKPGPEG LRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGE QGEKGDRGLPGTQGTPGAKGDGGIPGPAGPIGPPGPPGLPGPAGQKGDSGLPGPPGPP VGTWHQVLAVSTLRLPGPPGEVIQPLPILSPKKTRRHTESMQADAGDNILDYSDGMEE IFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFK VYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMV QMTFLKLLTASARQNFTYHCHQSAAWYDMSSGSYDKALRFLGSNDEEMSYDNNPYIKA LYDGCESRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCFLG" assembly_gap 6594387..6594419 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6609998..6610026 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6643232..6643250 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6683290..6684557 /estimated_length=1268 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6799780..6799818 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6819525..6819560 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6874867..6874879 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6898401..6898500 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6911053..6911158 /estimated_length=106 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6938197..>6986825 /locus_tag="PAL_GLEAN10017322" mRNA join(<6938197..6938388,6943939..6944057,6944817..6944900, 6945314..6945425,6946502..6946570,6947554..6947696, 6950622..6950747,6951768..6951919,6954178..6954339, 6955378..6955472,6955569..6955627,6957663..6957795, 6979352..6979498,6980371..6980568,6981220..6981450, 6982203..6982336,6983107..6983229,6983324..6983423, 6984994..6985112,6985213..6985338,6986636..>6986825) /locus_tag="PAL_GLEAN10017322" /product="Alpha-amylase 1" CDS join(6938197..6938388,6943939..6944057,6944817..6944900, 6945314..6945425,6946502..6946570,6947554..6947696, 6950622..6950747,6951768..6951919,6954178..6954339, 6955378..6955472,6955569..6955627,6957663..6957795, 6979352..6979498,6980371..6980568,6981220..6981450, 6982203..6982336,6983107..6983229,6983324..6983423, 6984994..6985112,6985213..6985338,6986636..6986825) /locus_tag="PAL_GLEAN10017322" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0043169 - cation binding [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="Alpha-amylase 1" /protein_id="ELK05838.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR006046" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006048" /db_xref="InterPro:IPR006589" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/Swiss-Prot:P04745" /translation="MAAPEQPLPMSRGCQSSISLSPPRGDRTLLVRHLPAELTAEEKE DLLKYFGAQSVRVLSDKGRLALTRLHQLKLLGHTLVVEFAKEQDQVHSPCPSSGTEKK KRSDDPVEDDKEKKELGCLTIENGIAPNHGLTFPLNSCLKYMYPPPSSTILANIVNAL ASVPKFYVQVLHLMNKMNLPTPFGPITARPPMYEDYMPLHAPLPPASPQPPEEPPLPD EDEELSSKESEYESSDDEDRQRMTKLMELANLQPKRPKTIKQRRVRKKQKIKDMLNTP SSVSHSSLHPVLLPSDVFDQPQPVGNKKIEFHISTDMPAAFKKDLEKEQNFEEQNCDL PATEIDASSIGFGKIFPKPNLNIAEESKEDSDEMPSECISRRELEKGRISREEMETLS VFRSYEPGEPNCRIYVKNLAKHVQEKDLKFIFGRYVDFSSETERIMFDIRLMKEGRMK GQAFVGLPNEKAAAKALKEANGYVLFGKPMVVISPPNENVVINNPSRPWWERYQPISY KLCTRSGNEDEFKDMVTRCNNVGVHIYVDAVINHMCGNAVAAGTSSTCGSYFNPGNRD FPAVPFSGWDFNDGKCKTGSGDIENYNDPYQVRDCRLVGLLDLTLEKDYVRSKIAEYL NHLIDIGVAGFRIDAAKHMWPGDMKAILDKLHNLNTTWFPEGSKPFIYQEVIDLGSEP IKSSEYFENGRVTEFKYGAKLGTVLRKWNGEKMAYLKNWGEGWGFMPSDRALVFVDNH DNQRGHGAGGASILTFWDSRLYKMGVGFMLAHPYGFTRVMSSFRWPRYFENGKDVNDW IGPPNNNGVIKEVTINADTTCGNDWVCEHRWRQIRNMVMFRNVVDGQPFTNWWDNGSN QVAFGRGNRGFIVFNNDDWPLSLTLQTGLPTGTYCDVISGDKIGDNCTGIKIYVSGDG NAHFSISNSAEDPFVAIHAESKL" assembly_gap 6980854..6980879 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7000573..7000624 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7047358..7047540 /estimated_length=183 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7059118..7061210 /estimated_length=2093 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7069771..7069797 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7083001..7083438 /estimated_length=438 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7121395..7122444 /estimated_length=1050 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7138559..7138597 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7139697..7139712 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7217474..7217569 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7315663..7315690 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7362309..7362330 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7365565..7365577 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7477507..7477811 /estimated_length=305 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7498434..7500281 /estimated_length=1848 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7584597..7584647 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7622772..7622810 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7637448..7637479 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7686198..7686228 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7703354..7703374 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7761595..7761645 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7764484..7764513 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7808122..7808178 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7824955..7825018 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7849386..7850106 /estimated_length=721 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7874086..7875076 /estimated_length=991 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7931584..7931648 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7946544..7946577 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7990354..7990367 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8069002..8069018 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8095233..8095281 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8102354..8102383 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8181180..8181205 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8194833..8194846 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8250400..8250417 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8272276..8272331 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8273619..8273663 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8282049..8282546 /estimated_length=498 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8350697..8350820 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8379579..8379619 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8388446..8388464 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8391551..8391728 /estimated_length=178 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8435799..8435872 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8448899..8449384 /estimated_length=486 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8452056..>8453186 /locus_tag="PAL_GLEAN10017325" mRNA <8452056..>8453186 /locus_tag="PAL_GLEAN10017325" /product="Protein arginine N-methyltransferase 6" CDS 8452056..8453186 /locus_tag="PAL_GLEAN10017325" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0008168 - methyltransferase activity [Evidence IEA]" /codon_start=1 /product="Protein arginine N-methyltransferase 6" /protein_id="ELK05839.1" /db_xref="InterPro:IPR007857" /db_xref="UniProtKB/Swiss-Prot:Q96LA8" /translation="MSQPKKRKLESGGGGGGEGVEEKDGGEQAEAALLLRPRRSRRER DQLYYECYSDISVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCA QAGARRVYAVEASAIWQQAREVVRLNGLEDQVHVLPGPVETVELPEQVDVIVSEWMGY GLLHESMLSSVLHARTKWLKEGGLLLPASAELFVAPISDQMLELRLGFWSQVKQLYGV DMSCLESFATRCIMGHSEIVVQDLSGEDVLAQPQCFAQLELARAGLEQELEAGIGGRF RFSCYGSAPMHGFAIWFQVTFPGGDSEKPLVLSTSPFHPVTHWKQALLYLNEPVQVEQ DTDISGEITLLPSRDNHRLLRVQLRYKVGDQEEKTKDFAMED" assembly_gap 8471515..8471535 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8477272..8477347 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8496131..8496287 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8513921..8514234 /estimated_length=314 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8526717..8526771 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8539353..8539395 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8585943..8586200 /estimated_length=258 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8604022..8604230 /estimated_length=209 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8655855..>8798718 /locus_tag="PAL_GLEAN10017326" mRNA join(<8655855..8655998,8658847..8659487,8719493..8719665, 8730926..8730952,8751156..8751323,8798471..>8798718) /locus_tag="PAL_GLEAN10017326" /product="Netrin-G1" CDS join(8655855..8655998,8658847..8659487,8719493..8719665, 8730926..8730952,8751156..8751323,8798471..8798718) /locus_tag="PAL_GLEAN10017326" /note="GO_component: GO:0005578 - proteinaceous extracellular matrix [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Netrin-G1" /protein_id="ELK05840.1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR002049" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR008211" /db_xref="UniProtKB/Swiss-Prot:Q9Y2I2" /translation="MPKAPDQCKAMKFSPCFGMRFGGSQLDINVAIHPELAVLPSPSG SVPVGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKDYPKPLQVNITL SWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVK DLSQHTVLEIICTEEYSTGYMTNSKIIHFEIKDRFAFFAGPWLRNMASLYGQLDTTKK LRDFFTVTDLRIRLLRPAVGEVFVDELHLARYFYAISDIKVHGRCKCNLHATVCVYDN SKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISSIGNCECFG HSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIANVCDNEL LHCQNGGTCHNNVRCLCPAAYTGILCEKLRCEEAGSCGSDSGQGASLQGPRALLLLLP PLLLTALLATASPLGF" assembly_gap 8688155..8688179 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8741557..8741722 /estimated_length=166 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8821555..8821576 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8858059..8858096 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8879667..>8913047) /locus_tag="PAL_GLEAN10017328" mRNA complement(join(<8879667..8879848,8894850..8894979, 8901282..8901369,8901932..8902048,8905655..8905689, 8909544..8909609,8912952..>8913047)) /locus_tag="PAL_GLEAN10017328" /product="Guanine nucleotide exchange factor VAV3" CDS complement(join(8879667..8879848,8894850..8894979, 8901282..8901369,8901932..8902048,8905655..8905689, 8909544..8909609,8912952..8913047)) /locus_tag="PAL_GLEAN10017328" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Guanine nucleotide exchange factor VAV3" /protein_id="ELK05841.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001452" /db_xref="UniProtKB/Swiss-Prot:Q9UKW4" /translation="MSYRKYAKVQGDTGWGGSDVALQIEEAFITEEGRNLASGEVGFF PSDAVKPCPCVPKPVDYSCQPWYAGAMERLQAETELINRVNSTYLVRHRTKESGEYAI SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKHHSLKEGFRTLDTTLQFPY KEPEHAAGQRGSRTGNSLLSPKVLGIAIARYDFSARDMRELSLLKGDVVKIYTKLSAN GWWRGEANGKASFPPRACE" assembly_gap 8930575..8930619 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8952968..8952982 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8966511..8967347 /estimated_length=837 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8983727..8983912 /estimated_length=186 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9005575..9005615 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9010341..9010368 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9020497..>9191048) /locus_tag="PAL_GLEAN10017329" mRNA complement(join(<9020497..9020610,9020994..9021126, 9022689..9022774,9026606..9026692,9028171..9028239, 9029032..9029175,9030821..9030916,9034511..9034610, 9036010..9036113,9042123..9042231,9046973..9047038, 9049168..9049226,9114592..9114708,9190845..>9191048)) /locus_tag="PAL_GLEAN10017329" /product="Guanine nucleotide exchange factor VAV3" CDS complement(join(9020497..9020610,9020994..9021126, 9022689..9022774,9026606..9026692,9028171..9028239, 9029032..9029175,9030821..9030916,9034511..9034610, 9036010..9036113,9042123..9042231,9046973..9047038, 9049168..9049226,9114592..9114708,9190845..9191048)) /locus_tag="PAL_GLEAN10017329" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]" /codon_start=1 /product="Guanine nucleotide exchange factor VAV3" /protein_id="ELK05842.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR003096" /db_xref="InterPro:IPR022613" /db_xref="UniProtKB/Swiss-Prot:Q9UKW4" /translation="MEPWKQCAQWLIHCKVLPANHRVTWDSAQVFDLAQTLRDGVLLC QLLNNLRARSINLKEINLRPQMSQFLCLKNIRTFLTACCETFGMRKSELFEAFDLFDV RDFGKVIETLSRLSRTPIALATGIRPFPTEESVNDEDIYKGLPDLIDETHVEDEEGLY DCVYGEDEGGEVYEDLMKAEEAHQPELVKVHRNLMQEIHDSIVNKNDQNLYQIFINYK ERLVIYGQYCSGVESAISSLDYISKTKEDVKLKLEECSKRANNGKFTLRDLLVVPMQR VLKYHLLLQIAEKRDCKSEAYSNGAFEKDLNQGSGSKDFKGKDQSEYHHNVVRGESGE LVKHTADPVEKANLKLALDAMKDLAQYVNEVKRDNETLREIKQFQLSIENLNQPVLLF GRPQGDGEIRITTLDKHTKQERHIFLFDLAVIVCKRKGDNYEMKEIIDLQQYKIANNP TTDKENKKWSYGFYLIHTQGQNGLEFYCKTKDLKKKWLEQFEMAL" assembly_gap 9026915..9026937 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9103594..9103617 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9133589..9134021 /estimated_length=433 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9140354..9141538 /estimated_length=1185 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9172110..9172124 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9189868..9189881 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9191108..9191468 /estimated_length=361 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9233101..9233290 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9235280..9235305 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9276834..9278136 /estimated_length=1303 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9285297..9285332 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9307164..>9336046) /locus_tag="PAL_GLEAN10017330" mRNA complement(join(<9307164..9307348,9309577..9309727, 9312687..9312854,9314329..9314436,9314845..9314997, 9317280..9317438,9319452..9319563,9324616..9324703, 9326823..9326949,9329140..9329592,9335864..>9336046)) /locus_tag="PAL_GLEAN10017330" /product="Calcium-binding mitochondrial carrier protein SCaMC-1" CDS complement(join(9307164..9307348,9309577..9309727, 9312687..9312854,9314329..9314436,9314845..9314997, 9317280..9317438,9319452..9319563,9324616..9324703, 9326823..9326949,9329140..9329592,9335864..9336046)) /locus_tag="PAL_GLEAN10017330" /note="GO_component: GO:0005743 - mitochondrial inner membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Calcium-binding mitochondrial carrier protein SCaMC-1" /protein_id="ELK05843.1" /db_xref="InterPro:IPR001993" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR002067" /db_xref="InterPro:IPR002167" /db_xref="InterPro:IPR018108" /db_xref="InterPro:IPR018248" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:A5PJZ1" /translation="MLRWLRGFVLPAAACESAEQPTRYETLFQQLDRNRDGVVDIHEL QEGLRNLGIPLGQDAEEEEPGLCPADLGAQLERHGHALQGRAPSVASTEAPGAPRASA LEPLRCAIPFLRFTWQRAFVFHASEDAALLDFCQLDVWWAECPFLPHFHVWETHGPQC GPHLPPGTSWMDAFYEELIRYLDRNKDGILDILEIQEGLESLAGISLRDETKKIFTTG DINKDGKLDFEEFMKYLKDHEIKMKLAFKSLDKNNDGKIEASEIVQSLQILGLTISEQ QAELILRSIDADGTMTVDWNEWRDYFLFNPVTDIEEIIRFWKRSTGIDIGDSLTIPDE FTEDERQSGQWWRQLLAGGVAGAISRTSTAPLDRLKVMMQVHGSTSDKMNIYDGFRQM VKEGGFRSLWRGNGTNVMKIAPETAIKFWAYEQYKKLLTEEGQKIGTSERFISGSMAG ATAQTFIYPMEVMKTRLAVGKTGQYSGLFDCAKKIVKHEGLGAFYKGYIPNLLGIIPY AGIDLAVYELLKSHWLDNFAKDSVNPGVLVLLGCGALSSTCGQLASYPLALVRTRMQA QAMVEGNAQLNMVGLFRRIISKEGVPGLYRGITPNFMKVLPAVGISYVVYENMKQTLG VTQK" assembly_gap 9308916..9308944 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9347446..>9359452) /locus_tag="PAL_GLEAN10017331" mRNA complement(join(<9347446..9347618,9348802..9348952, 9350791..9350958,9359435..>9359452)) /locus_tag="PAL_GLEAN10017331" /product="Calcium-binding mitochondrial carrier protein SCaMC-1" CDS complement(join(9347446..9347618,9348802..9348952, 9350791..9350958,9359435..9359452)) /locus_tag="PAL_GLEAN10017331" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Calcium-binding mitochondrial carrier protein SCaMC-1" /protein_id="ELK05844.1" /db_xref="InterPro:IPR001993" /db_xref="InterPro:IPR018108" /db_xref="UniProtKB/Swiss-Prot:Q6NUK1" /translation="MWAYEQVIRTRLALGKTGQYSGIIDCSKKLLKQEGVRTFFKGYI PNVLSIIPYAGIDLAVYELLKNYWLEHFSGNSVDPGVIIVMGCSTLAHTSGQLASFPL GLIRTRLQAQALEQKETTMIHLIQDIYNKEGKKGFFRGFTPNIIKVLPAVVISSITYE KMKRYFGLI" assembly_gap 9364249..9366680 /estimated_length=2432 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9386193..9386216 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9393047..9393076 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9416468..9416828 /estimated_length=361 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9416886..>9463500 /locus_tag="PAL_GLEAN10017332" mRNA join(<9416886..9417022,9424388..9424450,9438596..9438716, 9444755..9444784,9449589..9449705,9453275..9453321, 9459841..9459944,9461964..9462059,9462197..9462386, 9462483..9462610,9463403..>9463500) /locus_tag="PAL_GLEAN10017332" /product="Protein FAM102B" CDS join(9416886..9417022,9424388..9424450,9438596..9438716, 9444755..9444784,9449589..9449705,9453275..9453321, 9459841..9459944,9461964..9462059,9462197..9462386, 9462483..9462610,9463403..9463500) /locus_tag="PAL_GLEAN10017332" /codon_start=1 /product="Protein FAM102B" /protein_id="ELK05845.1" /db_xref="InterPro:IPR019448" /db_xref="UniProtKB/Swiss-Prot:Q5T8I3" /translation="MMKKKKFKFKVDFGLEELSSVPFVNGVLFCKMRLLDGGSFTAES PSSKQERWSKGHEDNDNRSEKLTEVVQANCVHWRKKFSFMCKMSASATTGILDPCIYR VSVRKELKGGKTYAKLGFADLNLAEFAGSGNTTRRCLLEGYDTKNTRQDNSILKVLIS MQLMSGDPCFKTPPSTSMSIPIAGESESLEEDRKGGETLKIHLGIADLSAKSASVPDE LGACGHSRTSSYASQQSKVSGYSSCHSRSSSFSELCHRRNTSVGSTSTGIESILEPCD ETEQKVSEPNLDTADKEDTVSETLNRCPVKQDSVESQLKRVDDTRVDADDIVEKILQS QDFSLDSSAEEEGLRLFVGPGGSTTFGSHHLPNRYVIQIVSY" assembly_gap 9417854..9417907 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9467695..9469890 /estimated_length=2196 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9478749..9479065 /estimated_length=317 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9482436..9483222 /estimated_length=787 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9511860..>9519207 /locus_tag="PAL_GLEAN10017334" mRNA join(<9511860..9512141,9514924..9514992,9515266..9515417, 9515496..9515556,9517812..9518035,9518357..9518563, 9518601..>9519207) /locus_tag="PAL_GLEAN10017334" /product="Pre-mRNA-splicing factor 38B" CDS join(9511860..9512141,9514924..9514992,9515266..9515417, 9515496..9515556,9517812..9518035,9518357..9518563, 9518601..9519207) /locus_tag="PAL_GLEAN10017334" /codon_start=1 /product="Pre-mRNA-splicing factor 38B" /protein_id="ELK05846.1" /db_xref="InterPro:IPR005037" /db_xref="UniProtKB/Swiss-Prot:Q5VTL8" /translation="MANNSPALTGNSQPQHQAAAAAAQQQQQQQCGGGAATKPAVSGK QGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWE KGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIR ALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFST LFPRIPVPVQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPR RSRSRSHHREGHGCSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRHRKG DRRDRDREREKENERGRRRDRDYDKERGADREKERERSRERSKERRSRGEVEEKKHKE DKDDRRHRDDKKESKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKSES KEKSNKRSRSGSQGRTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDK HDRRRSQSIEPESQEKQHKDKDETV" assembly_gap 9518564..9518597 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9528041..>9602230 /locus_tag="PAL_GLEAN10017335" mRNA join(<9528041..9528103,9528609..9528627,9532572..9532826, 9533685..9533945,9534700..9534957,9536967..9537221, 9538253..9538510,9539083..9539337,9540562..9540816, 9542457..9542717,9566813..9566862,9567441..9567522, 9570534..9570610,9573203..9573281,9574626..9574726, 9578367..9578521,9581054..9581144,9583800..9583927, 9586957..9587052,9587196..9587253,9590442..9590507, 9591293..9591373,9592249..9592387,9592671..9592777, 9593287..9593379,9595043..9595128,9600993..9601141, 9602136..>9602230) /locus_tag="PAL_GLEAN10017335" /product="Fibronectin type III domain-containing protein 7" CDS join(9528041..9528103,9528609..9528627,9532572..9532826, 9533685..9533945,9534700..9534957,9536967..9537221, 9538253..9538510,9539083..9539337,9540562..9540816, 9542457..9542717,9566813..9566862,9567441..9567522, 9570534..9570610,9573203..9573281,9574626..9574726, 9578367..9578521,9581054..9581144,9583800..9583927, 9586957..9587052,9587196..9587253,9590442..9590507, 9591293..9591373,9592249..9592387,9592671..9592777, 9593287..9593379,9595043..9595128,9600993..9601141, 9602136..9602230) /locus_tag="PAL_GLEAN10017335" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006904 - vesicle docking involved in exocytosis [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="Fibronectin type III domain-containing protein 7" /protein_id="ELK05847.1" /db_xref="InterPro:IPR001619" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="UniProtKB/Swiss-Prot:Q5VTL7" /translation="MAGGPKKCLSLIGFSLICLKMVASAKTAPEIPTIDQAYSKISNS ITVEWAIVPGATSYLLTAKDGDTVIETMVANSPGTVTGLKAATLYQITVRSISAAGRS QASPPKQAKTVLAAPILEVSSPSPDSILVQWEAVYMAIGFSVSIMRANGLGRIWKENT TNTTLTFTSLDAGTLYTIKAYAWNANGTPGDDSTCNQRTSPRAPANIQVSFDSGALQA SVSWAPTEGAFNYTVMALSGSSELSCSTVFSSCIISSLQCGTRYLISVLASNDAGSSG SASAVTLKTVACAPGRVTIQEDPPGHLSVSWSNVDLGDYYVAFVKSDDGLEVHCNTSL TQCNFLSECGFTYFISVFAYNKAGQSPLGDVFNYTTAPCCPSDVNPVLVSSDRVEIVW SPVRGAELYETKAVDGSSVLECTDTAPACTLSALVCDTEYNITVHSYSEVRGSNKSCT SRFITTAPCSPEIKNVSEDAFSMINVHWQSSNDGATYTVTAQGEKGRYGCSSAGESCT MRGLPCGSLFSVTAVAETQAGRSPPSYSVPLETVPCCPAGLTVTQVTQSVVNVSWTVG TGAQTYVTVLESHTGQSKCHTHQNHCLLGCITCGINYTVALKAVSATGLTADCTYQSY SSSACCPLGVKLYRLGPNGIRIYWQIARGSANYSTDLYGSKGIFTCAPSTGLSFCDVT EIPCGDVYTVMVSPVAETGLKLTFCPKKIYSEIKSAVFDDCKKEDEWKIMLLDEFTTK LLASCCKMTDLLAEGITVVENIYKNREPVRQMKALYFISPTSKSVDCFLRDFASKSEN KYKAAYIYFTDFCPDSLFNKIKASCSKSIRRCKEINISFIPLESQVYTLDVPDAFYYC YSPDPSNANGKDAIMEAMAEQIVTVCATLDENPGVRYRSKPLDNASKLAQLVEKKLEN YYKTDEKSLIKSKTHSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKQYKTD GKEKEAVLEEDDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKTSLSALAQLMK KMPHFRKQITKQVVHLNLAEDCMNKFKSNIEKLCKTEQDLALGTDAEGQKVKDSMRVL LPVLLNKNHDNYDKIRAILLYIFSINGTTEENLDRLIQNVKIENESDMIRNWIYLGVP IVPPSQQSKSLRKDRSAEETFQLSRWTPFIKDILEDAIDNRLDSKEWPYCSQCPAVWN GSGAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEMRCAYEVSQAHKSCEVIIGST HILTPKKLLDDIKMLNKSKDKISFIKDE" assembly_gap 9530105..9530696 /estimated_length=592 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9551242..9551359 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9556100..9556114 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9556386..9556408 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9593056..9593074 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9595823..9595901 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9596599..9596640 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9606516..9606568 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9614040..>9620725) /locus_tag="PAL_GLEAN10017336" mRNA complement(join(<9614040..9614206,9614443..9614565, 9617698..9617795,9620589..>9620725)) /locus_tag="PAL_GLEAN10017336" /product="hypothetical protein" CDS complement(join(9614040..9614206,9614443..9614565, 9617698..9617795,9620589..9620725)) /locus_tag="PAL_GLEAN10017336" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05848.1" /db_xref="UniProtKB/Swiss-Prot:Q5T1N1" /translation="MSHFLVHSRICVCFVVQEDPSKASGKQKHAETTSRSCAFCHQIC EWKQKMEKKGHRRINCGRFPIVLQEKALHPNSILSPETGHSCYFTSGTGLRSNKCETC GTDMHRSPRVCHKEALKGGLVSLLQETYITLATASTWGAPCSPQSAAQASSFPIQPCS WMAAGCTEAGDMKS" gene complement(<9625521..>9638800) /locus_tag="PAL_GLEAN10017337" mRNA complement(join(<9625521..9625550,9626127..9626277, 9632752..9632885,9637922..>9638800)) /locus_tag="PAL_GLEAN10017337" /product="hypothetical protein" CDS complement(join(9625521..9625550,9626127..9626277, 9632752..9632885,9637922..9638800)) /locus_tag="PAL_GLEAN10017337" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05849.1" /db_xref="UniProtKB/Swiss-Prot:Q5T1N1" /translation="MDKANFSEDTTLEQQEDSPYDEGFSQMKLYNDYNFTSKNDTLDV SDQIISAVDDPQEDATRQETCRNVGRALILDAMTENAVRKTYDKEKQCTTNLHMPANQ GDLSKSNISDVLLHHLSKEEVFKGQGVNCETLSETSNADSFDEAVLKNIILRYLQNSW PKPPPPELADQLNPKRDGENKNKPSCCPTTAEGSTPEVEEPVAAGDSSHPENSNLLTE TESPRDNQKSGRGQTPQKQQTEKARSGNGFKCSQGQVFHRFSDFSKVSPKVKIPKNNI IDKLLMIYKPASLLNQEVLEKLQGHLELLGQEFLTKKEKHLTLKQQVYKHESPAASDF DPERKVESEIFKLKMLLEDVKEKSDESKPTSALPPSSPTIPDELASAPSPPSDEIVLE DTARG" assembly_gap 9644107..9644309 /estimated_length=203 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9658722..9659078 /estimated_length=357 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9671653..>9678526 /locus_tag="PAL_GLEAN10017338" mRNA join(<9671653..9671708,9673559..9673673,9678407..>9678526) /locus_tag="PAL_GLEAN10017338" /product="hypothetical protein" CDS join(9671653..9671708,9673559..9673673,9678407..9678526) /locus_tag="PAL_GLEAN10017338" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05850.1" /translation="MEENLISMREDHSFHVRYSPRSMEGPLNFLGYSHQMNLERCLSV LLFVFRSGVLLNTDPLFSPTSRESRVHHSSEQLRTRYFDPVIGSMGCSGWAS" gene <9678792..>9700575 /locus_tag="PAL_GLEAN10017339" mRNA join(<9678792..9679012,9679380..9679515,9679842..9679984, 9680474..9680597,9680705..9680820,9683200..9683355, 9684291..9684399,9685305..9685434,9688742..9688812, 9692555..9692731,9693426..9693585,9694378..9694595, 9700348..>9700575) /locus_tag="PAL_GLEAN10017339" /product="G-protein-signaling modulator 2" CDS join(9678792..9679012,9679380..9679515,9679842..9679984, 9680474..9680597,9680705..9680820,9683200..9683355, 9684291..9684399,9685305..9685434,9688742..9688812, 9692555..9692731,9693426..9693585,9694378..9694595, 9700348..9700575) /locus_tag="PAL_GLEAN10017339" /note="GO_function: GO:0005096 - GTPase activator activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0042802 - identical protein binding [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]" /codon_start=1 /product="G-protein-signaling modulator 2" /protein_id="ELK05851.1" /db_xref="InterPro:IPR001440" /db_xref="InterPro:IPR003109" /db_xref="InterPro:IPR011717" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:P81274" /translation="MEASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSA IYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEA VVCCQRHLGISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEEVRSALQ AAVDYYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD KAAERRAYSNLGNAYIFLGEFEAASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL QDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISR EVGDRSGELTARLNLSDLQMVLGLSYSTNNSVMSENIEIDHSLHGARPKFSRRHSMEN MELMKLTPEKVQNWNSELLAKQKPLIAKPSTKLLFVNRLKGKKYKTSSSTKVLQDASN SIDHRIPSSQRKISADTIGDEGFFDLLSRFQSNRMDDQRCCLQEQNCGTASTAASSTP PRTMLKTPSVSTVSPNTDEFLDLLASSQSRRLDDQRASFSNLPGLRLTQNNNQSVLGR LMTKDNKEPDEDFFDILVKCQGSRLDDQRCAPPPAATRGPTVPDEDFFSLILRSQAKR MDEQRVLLQRDQNRDTEFGLKGCLQSTALLEFKNSGKK" assembly_gap 9679646..9679658 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9701563..>9701889 /locus_tag="PAL_GLEAN10017340" mRNA <9701563..>9701889 /locus_tag="PAL_GLEAN10017340" /product="hypothetical protein" CDS 9701563..9701889 /locus_tag="PAL_GLEAN10017340" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05852.1" /translation="MKMTTDELLKLKYERYRLGSQLSLSLALLFPETEGGLQGYITEH DITFSKRQPGRTRAGPRLRLNCMLRMPTPGASWNAFTSGCSCPHSWDWLWEARSKNSS GDFDQQ" gene complement(<9704156..>9716861) /locus_tag="PAL_GLEAN10017341" mRNA complement(join(<9704156..9704428,9706290..9706631, 9708177..9708323,9709953..9710051,9711619..9711840, 9713843..9713950,9716241..9716342,9716733..>9716861)) /locus_tag="PAL_GLEAN10017341" /product="Chloride channel CLIC-like protein 1" CDS complement(join(9704156..9704428,9706290..9706631, 9708177..9708323,9709953..9710051,9711619..9711840, 9713843..9713950,9716241..9716342,9716733..9716861)) /locus_tag="PAL_GLEAN10017341" /codon_start=1 /product="Chloride channel CLIC-like protein 1" /protein_id="ELK05853.1" /db_xref="InterPro:IPR009231" /db_xref="UniProtKB/Swiss-Prot:Q1LZF8" /translation="MLCSLLLCECLWLITSYAYDDDWIDPTDMLNYDAASGTMRKSQG KYGISEKKEVSSDLPMADELSECYSRLDSLTHKIDECEKKKMKDYESQSNPVFRRYLN KILIETKKLGLPDENSGDMHYDAEIILKRQTLLEIQKFLNGEDWKPGALDDALSDILI NFKFHDFEVWKWRFEDYFGVDPYNVFMLAFAQHQAEVAKLQPLNNVCAEKMDWAGSLW GKALAVTFTNFVSEPLKHIGKGTGEFIRALMKEIPVLLHIPVLIVMALAVLSFCYGAG KSVHMLRPLGGPEREQPPARQLGDKRRQQEIDYRPHGGAGDAEFHYRGRIGPTEQGPY DKTYESRRDVLRERDVDLRFQTGTKSPEVLRAFDLPDAEAREHPVVAPRAKSPILDTK PREIGGIPGESTPTEISPKSGQPPAPVSGQEPSGNVEGSPTAAKAQPRTNAKGSPEDS STTSPSGTVAEAGGGDPDGGPRG" assembly_gap 9715199..9715209 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9729495..>9764118) /locus_tag="PAL_GLEAN10017342" mRNA complement(join(<9729495..9729637,9731287..9731505, 9734716..9734847,9735485..9735655,9736221..9736390, 9739003..9739160,9740909..9740984,9743590..9743850, 9746761..9746939,9751176..9751302,9755462..9756264, 9757628..9757712,9759895..9759978,9762225..9762391, 9764104..>9764118)) /locus_tag="PAL_GLEAN10017342" /product="WD repeat-containing protein 47" CDS complement(join(9729495..9729637,9731287..9731505, 9734716..9734847,9735485..9735655,9736221..9736390, 9739003..9739160,9740909..9740984,9743590..9743850, 9746761..9746939,9751176..9751302,9755462..9756264, 9757628..9757712,9759895..9759978,9762225..9762391, 9764104..9764118)) /locus_tag="PAL_GLEAN10017342" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="WD repeat-containing protein 47" /protein_id="ELK05854.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR006594" /db_xref="InterPro:IPR006595" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="UniProtKB/Swiss-Prot:O94967" /translation="MNRKVAINMTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEK ESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEA LCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPSKDDYSKLCLLLTLPRLTNHAEF KDWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEF CQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIH VDKLLKPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALDGLTCGLTS HDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSLMLENTECHSIYEESPERSDTPVEG QRPINSEILGQSSISEKEPANGAQNPGPAKQEKNELRDSTEQFQEYYRQRLRYQQHLE QKEQQRQIYQQMLLEGGVNQEDGPEQQQNLTEQFLNRSIQKLGELNIGMDSLGNDVSV LNQQCNGSKGNGSNNSSVISFTTPPQDSSQKLTHDASNIHTSTPRNPGSTNHIPFLEE SPSCGNQISSEHLVIKPPFGDSAGNLSRSRGEEDDKSKKQFVCINTLEDTQAVRAVAF HPGGGLYAVGSNSKTLRVCAYPEVIDPSAQDIPKQPVVRFKRNKHHKGSIYCVAWSPC GQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISA GAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLRVPSC VRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVR SVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQDLSFL SSSADRTVTLWTYSG" assembly_gap 9783872..9783969 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9784687..>9790341) /locus_tag="PAL_GLEAN10017343" mRNA complement(join(<9784687..9784857,9785807..9785904, 9789448..9789526,9790315..>9790341)) /locus_tag="PAL_GLEAN10017343" /product="Transcription initiation factor TFIID subunit 13" CDS complement(join(9784687..9784857,9785807..9785904, 9789448..9789526,9790315..9790341)) /locus_tag="PAL_GLEAN10017343" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA]; GO_process: GO:0006366 - transcription from RNA polymerase II promoter [Evidence IEA]" /codon_start=1 /product="Transcription initiation factor TFIID subunit 13" /protein_id="ELK05855.1" /db_xref="InterPro:IPR003195" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q5R9W6" /translation="MADEEEDPTFEEENEEIGGGAEGGQGKRKRLFSKELRCMMYGFG DDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQGRVQVEDIVFLIRKDPRKFARVKD LLTMNEELKRARKAFDEANYGS" assembly_gap 9788631..9788945 /estimated_length=315 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9793536..9793570 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9800832..>9801632 /locus_tag="PAL_GLEAN10017344" mRNA join(<9800832..9800964,9801550..>9801632) /locus_tag="PAL_GLEAN10017344" /product="Transmembrane protein 167B" CDS join(<9800832..9800964,9801550..9801632) /locus_tag="PAL_GLEAN10017344" /codon_start=1 /product="Transmembrane protein 167B" /protein_id="ELK05856.1" /db_xref="InterPro:IPR009653" /db_xref="UniProtKB/Swiss-Prot:Q5RAU6" /translation="VYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYK AAVIGTRLHAAVAIACVVMAFYVLFIK" assembly_gap 9804922..9804945 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9807125..>9808584) /locus_tag="PAL_GLEAN10017345" mRNA complement(join(<9807125..9807195,9807429..9807556, 9807888..9808003,9808552..>9808584)) /locus_tag="PAL_GLEAN10017345" /product="hypothetical protein" CDS complement(join(9807125..9807195,9807429..9807556, 9807888..9808003,9808552..9808584)) /locus_tag="PAL_GLEAN10017345" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05857.1" /db_xref="InterPro:IPR022179" /db_xref="UniProtKB/Swiss-Prot:Q5T5A4" /translation="MRRDAYFFDPEIPKDDLDFRLAALYDHHMGAFKNKSEILIHQET IQDTHAIMKIQSPGGLSPSPTSSITSQANIRHWINPKKDSIHSIQGSIVSPHTAATNG GYSRKNDGGFFST" gene <9813095..>9872084 /locus_tag="PAL_GLEAN10017346" mRNA join(<9813095..9813134,9813650..9813858,9841214..9841334, 9843463..9843655,9848912..9849059,9849517..9849597, 9850234..9850339,9850480..9850629,9855865..9855953, 9859339..9859516,9860222..9860350,9860727..9860817, 9862503..9862608,9862873..9863010,9863847..9864110, 9865395..9865568,9867503..9867683,9867987..9868083, 9869843..9869969,9870047..9870225,9870762..9870927, 9872016..>9872084) /locus_tag="PAL_GLEAN10017346" /product="UPF0577 protein KIAA1324" CDS join(9813095..9813134,9813650..9813858,9841214..9841334, 9843463..9843655,9848912..9849059,9849517..9849597, 9850234..9850339,9850480..9850629,9855865..9855953, 9859339..9859516,9860222..9860350,9860727..9860817, 9862503..9862608,9862873..9863010,9863847..9864110, 9865395..9865568,9867503..9867683,9867987..9868083, 9869843..9869969,9870047..9870225,9870762..9870927, 9872016..9872084) /locus_tag="PAL_GLEAN10017346" /codon_start=1 /product="UPF0577 protein KIAA1324" /protein_id="ELK05858.1" /db_xref="InterPro:IPR009011" /db_xref="InterPro:IPR009030" /db_xref="UniProtKB/Swiss-Prot:Q6UXG2" /translation="MEIRSPEAAAFAVVVAAAAAPEPLLPLALDNAMAEPGRSLHPSP RGRGRTERRTLRLLRLLLWVGTAFQVTQGAGPELHACKESEYHYEYTACDSTGSRWRV AVPHSPGLCTSLPDPVKGTECSFSCNAGEFLDMKDQSCKPCAEGRYSLGTGIRFDEWD ELPHGFASLSTNMEIDDSTAESTENCTLSKWVPLGDYISSNTDECTATLMYAVNLKQS GTVNFEYYYPDSSIIFEFFVQNDQCQPNADDSRWMKTTEKGWEFHSVELNRGNNVLYW RTTAFSVWSKVSKPVLVRNIAITGVAYTSECFPCKPGTYADKQGSSFCKLCPANSYSN KGETSCHQCDPDKYSEKGSSSCKVRPACTDKDYFYTHTACDANGETQLMYKWAQPKIC GEDLEGAVKLPASGVKTRCPPCNPGFFKTSNSTCEPCPYGSYSNGSDCSHCPAGTEPV VGFEYKWWNTLPTNMETTVLSGINFEYKGMTGWEVAGDHIYTAVGASDNDFMILTLVV PGFRPPQAVMADTENKEVARITFVFETICSVNCELYFMVGVNSRTNTPVETWKGSKGK QSYTYIIEENATMSFTWAFQRTTFHEIGRKYTSDVAKIYSINITNVMDGVASYCRPCA LEASDMGSSCTSCPAGYYIDRDSGTCHSCPPDTILKAHQPYGVQACKPCGPGTKSNKI HSLCYNDCTFSISTPSRTFNYNFLALADTISLAGGPSFTSKGLKYFHHFTLSLCGNEG KKMSVCTDNVTDLRIPEGESGFSKSITAYVCQAVIIPPEVTGYKAGVSSQPVSLADRL IGVTTDMTLDGITSRAELFHPESLGIPDVIFFYSTCSDGTCDGCNFHFLWESVAACPL CSTADYHAIISSCVAGIQKTTYVWREPKLCVSGISLPEQRVTICKTIDFWLKVGISAG TCTAILLTVLTCYFWKKNQKLEYKYSKLVMNATLKDCDLPAADSCAIMEGEDVEDDLI FTSKKSLFGKIKSFTSKRTPDGFDSVPLKTSSGGPDMDL" assembly_gap 9813402..9813490 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9851592..9851619 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9854562..9854582 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9879295..>9896039 /locus_tag="PAL_GLEAN10017347" mRNA join(<9879295..9879430,9885990..9886060,9888977..9889057, 9889999..9890157,9891101..9891244,9892352..9892507, 9893441..9893662,9894201..9894330,9894587..9894744, 9895427..9895556,9895882..>9896039) /locus_tag="PAL_GLEAN10017347" /product="Seryl-tRNA synthetase, cytoplasmic" CDS join(9879295..9879430,9885990..9886060,9888977..9889057, 9889999..9890157,9891101..9891244,9892352..9892507, 9893441..9893662,9894201..9894330,9894587..9894744, 9895427..9895556,9895882..9896039) /locus_tag="PAL_GLEAN10017347" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO_function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]" /codon_start=1 /product="Seryl-tRNA synthetase, cytoplasmic" /protein_id="ELK05859.1" /db_xref="InterPro:IPR002314" /db_xref="InterPro:IPR002317" /db_xref="InterPro:IPR006195" /db_xref="InterPro:IPR010978" /db_xref="InterPro:IPR015866" /db_xref="UniProtKB/Swiss-Prot:Q5R9K9" /translation="MVLDLDLFRVDKGGDPALIRETQEKRFKDPRLVDQLVKADGEWR RCRFQADNLNKLKNLCSKTIGEKMKKKEPVGDDESIPDNVLSLDNLTADTLANLKVSQ IKKLRLLIDEAILKCDAERLKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWG DCTVRKKYSHVDLVVMVDGFEGEKGVVVAGSRGYFLKGVLVFLEQALIQYALRTLGSR GYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPI AALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHD NKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFREL VSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICALLENYQTEEGI VVPEKLREFMPPGLQELIPFVKPAPIDQEPSKKQKKQHEGSKKKGAVRDGTLESQLQN MEVTDS" assembly_gap 9883911..9883953 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9890526..9890581 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9900817..9900834 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9903991..9904065 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9906420..9906674 /estimated_length=255 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9907473..>9933989 /locus_tag="PAL_GLEAN10017348" mRNA join(<9907473..9910125,9919343..9919987,9921907..9922129, 9922537..9922652,9922829..9922917,9923267..9923424, 9923806..9923969,9924101..9924226,9924573..9924754, 9925050..9925337,9925424..9925598,9925821..9925962, 9926125..9926245,9926659..9926842,9927020..9927121, 9927838..9927932,9928178..9928387,9928863..9929046, 9929147..9929275,9929362..9929542,9929713..9929880, 9929979..9930138,9930228..9930428,9930727..9930901, 9931230..9931342,9931489..9931568,9931657..9931783, 9931877..9931999,9932588..9932715,9932950..9933038, 9933149..9933337,9933751..>9933989) /locus_tag="PAL_GLEAN10017348" /product="Cadherin EGF LAG seven-pass G-type receptor 2" CDS join(9907473..9910125,9919343..9919987,9921907..9922129, 9922537..9922652,9922829..9922917,9923267..9923424, 9923806..9923969,9924101..9924226,9924573..9924754, 9925050..9925337,9925424..9925598,9925821..9925962, 9926125..9926245,9926659..9926842,9927020..9927121, 9927838..9927932,9928178..9928387,9928863..9929046, 9929147..9929275,9929362..9929542,9929713..9929880, 9929979..9930138,9930228..9930428,9930727..9930901, 9931230..9931342,9931489..9931568,9931657..9931783, 9931877..9931999,9932588..9932715,9932950..9933038, 9933149..9933337,9933751..9933989) /locus_tag="PAL_GLEAN10017348" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004888 - transmembrane receptor activity [Evidence IEA]; GO_function: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007156 - homophilic cell adhesion [Evidence IEA]; GO_process: GO:0007166 - cell surface receptor linked signaling pathway [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO_process: GO:0007218 - neuropeptide signaling pathway [Evidence IEA]" /codon_start=1 /product="Cadherin EGF LAG seven-pass G-type receptor 2" /protein_id="ELK05860.1" /db_xref="InterPro:IPR000203" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR000832" /db_xref="InterPro:IPR001791" /db_xref="InterPro:IPR001879" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002049" /db_xref="InterPro:IPR002126" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR008985" /db_xref="InterPro:IPR012680" /db_xref="InterPro:IPR015919" /db_xref="InterPro:IPR017981" /db_xref="InterPro:IPR022624" /db_xref="UniProtKB/Swiss-Prot:Q9HCU4" /translation="MDALFDSRSNHFFSLDPVTGAVTTAEELDRETKSTHVFRVTVQD HGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPN ANILYRLLEGPGGSPSEAFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPR SATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPILRVTASDRDKGSNALVHYS IMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQV LDINDNAPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGENARLEYRLAGVGHDFPF TINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFT QPEYTVRLNEDAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSL ALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPA GTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAI TARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD SGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDKGMPPA RTPIEVTVTVLDVNDNPPVFKQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQ IVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRN DNPPVLGNFEILFNNYVTNRSSSFPGGAIGRVPAHDPDISDSLTYSFERGNELSLVLL NASTGELRLSQALDNNRPLEAIMSVLVSDGVHSVTAQCALRVTIITDEMLTHSITLRL EDMSPERFLSPLLGLFIQAVAATLATPPDHVVVFNVQRDTDAPGGRILNVSLSVGQPP GPGGGPPFLPSEDLQERLYLNRSLLTAISAQRVLPFDDNICLREPCENYMRCVSVLRF DSSAPFIASSSVLFRPIHPVGGLRCRCPPGFTGDYCETEVDLCYSRPCGPHGRCRSRE GGYSLCRDGYTGEHCEVSARSGRCTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPYCQ VTTRSFPARSFITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKHDFVALEVIQE QVQLTFSAGESTTTVSPFVPGGVSDGQWHTVQLKYYNKPLLGQTGLPQGPSEQKVAVV TVDGCDTGVALRFGAVLGNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVQTR HFVGCMRNLQVDSRHVDMADFIANNGTVPGCPAKKNVCDSNTCHNGGTCVNQWDAFSC ECPLGYGGKSCAQEMANPQRFLGSSLVAWHGLSLPISQPWHLSLMFRTRQANGVLLQA VTRGRSTITLQVMQGRLREGHVVLSVEGTGLQASSLQLEPGRANDGDWHHAQLALGAS GGPGHAILSFDYGQQQAEGNLGPRLHGLHLSNITVGGVSGPASGVARGFRGCLQGVRV SETPGGVSSLDPSRGERINVEPGCSLPDPCDSNPCPANSYCSDDWDSYSCSCDPGYYG DNCTNVCDLNPCEHQSTCTRKPSAPHGYTCECPPNYLGPYCETRIDQPCPRGWWGHPT CGPCNCDISKGFDPDCNKTSGECHCKENHYRPTGSPICLLCDCYPTGSLSRVCDPEDG QCPCKPGVIGRQCDRCDNPFAEVTTNGCEVNYDSCPRAIEAGIWWPRTRFGLPAAAPC PKGSFGTAVRHCDEHRGWLPPNLFNCTSVTFSELKGFAERLQRNESGLDSGRSQRLAL LLRNATQHTAGYFGSDVKVAYQLATRLLAHESAQRGFGLSATQDVHFTENLLRVGSAL LDAANKRHWELIQQTEGGTAWLLQHYEAYASALAQNMRHTYLSPFTIVTPNIVISVVR LDKGNFAGAKLPRYEALRGERPPDLETTVILPESVFRETPPVVRPAGPGEAQESEELA RRQRRHPELSQGEAVASVIIYRTLAGLLPHNYDPDKRSLRVPKRPVINTPVVSISVHD DEELLPRALDKPVTVQFRLLETEERTKPICVFWNHSILVSGTGGWSARGCEVVFRNES HVSCQCNHMTSFAVLMDVSRREVGPIRGGCRVGNGEILPLKTLTYVALGVTLAALLLT FLFLTLLCALRSNQHGIRRNLTAALGLAQLVFLLGINQADLPFACTVIAILLHFLFLC TFSWALLEALHLYRALTEVRDVNAGPMRFYYMLGWGVPAFITGLAVGLDPEGYGNPDF CWLSIYDTLIWSFAGPVAFAVSMSVFLYILAARASCAAQRQGFEKKGPVSGLRPSFTA LLLLSSAWLLALLSVNSDTLLFHYLFAACNCIQGPLIFLSYVVLSKEVRKALKFACSR KPSPDPALTTKSTLTSSYNCPSPYADGRLYQPYGDSVGSLHSASRSGKSQPSYIPFLL REESTLNPSQGPPGLGDPGSLFLEGQDQQHDPDTDSDSDLSLEDDQSGSYASTHSSDS EEEEEEEAAAFPGEPGWDSLLGPGAERLPLHSTPKGILKKKCLPTISEKSSLLRLPLE QGTASSRGSSASEGSRGGPPPRPPPRQSLQEQLNGVMPIAMSIKAGTVDEDSSGSE" assembly_gap 9911029..9911084 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9913132..9917197 /estimated_length=4066 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9921047..9921059 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9924992..9925008 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9939189..>9941495) /locus_tag="PAL_GLEAN10017349" mRNA complement(join(<9939189..9939286,9939613..9939861, 9939950..9940064,9940429..9940870,9941329..9941386, 9941477..>9941495)) /locus_tag="PAL_GLEAN10017349" /product="Proline/serine-rich coiled-coil protein 1" CDS complement(join(9939189..9939286,9939613..9939861, 9939950..9940064,9940429..9940870,9941329..9941386, 9941477..9941495)) /locus_tag="PAL_GLEAN10017349" /codon_start=1 /product="Proline/serine-rich coiled-coil protein 1" /protein_id="ELK05861.1" /db_xref="UniProtKB/Swiss-Prot:Q29RJ9" /translation="MGDLQEDVKFIVDETLDFGGLSPSDSREEEDIAVLVTPEKPPRR GLSHRSDSNAVAPTPQGLRFSLGHLSPEKLEEILDEANKLAAQLERCALQERETTGEG LGPRRVKPSPRRETFVLKDSPVRDLLPTVSSLARSTPSPSSLTPRLRSSDRKGSVRAL WATSGKRPSSMKRESPTCNLFPTSKSPASSPLARPIPPIRGKAGPSGRATASPPTPVR PALAPPPSTSNSQRLSRPQGAAAKTSSRLPVPSAIPRPASRVPLTSRSIPPSKGALAP DSLSTRKGLPKPSTTGHRVPVSQRPDLPVTGATRSNLQPPRRVAVPGPTR" assembly_gap 9945110..9945186 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9947722..>9956074) /locus_tag="PAL_GLEAN10017350" mRNA complement(join(<9947722..9948177,9949178..9949314, 9949416..9949575,9949715..9949854,9950087..9950282, 9950800..9950888,9955927..>9956074)) /locus_tag="PAL_GLEAN10017350" /product="Myosin-binding protein H-like protein" CDS complement(join(9947722..9948177,9949178..9949314, 9949416..9949575,9949715..9949854,9950087..9950282, 9950800..9950888,9955927..9956074)) /locus_tag="PAL_GLEAN10017350" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Myosin-binding protein H-like protein" /protein_id="ELK05862.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:A2RUH7" /translation="MEAATAAEVASGPTLKVKEVSPADAEELQTSPRQGAGSPIPQLL LSPIEENPKIWLPRALRQTYIRKVGDIVNLLIPFQGKPKPRATWTHNGCALDASRVSV RNGERDSILFIREAQRADSGRYQLSVQLGGLEATATIDILVIERPGPPQSIKLTDVSG SNATLEWTPPRDTGNAALLGYTVQKADTKSGLWFTVLEHYRRTSCTVSNLIAGNSYAF RVFAENQCGLSETAPITADLAHIQKAATVYKTKGFAQRDFSEAPKFTQPLADCTTVTG YDTQLFCCVRASPKPKIIWLKNKMDIQGDPKYRALTNLGICSLEIRKPGPFDGGIYTC KAVNSLGEASVDCRVDVKGKGRIHALRCVISSLQRWKSQGRDTSLDGEGFGLIPISGP LITVINRMYLRSHFYFPLSHFFLSILILEYRKNCYLYFAKEEPEAQGGR" assembly_gap 9955451..9955480 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9960258..9960281 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9962720..>10017983) /locus_tag="PAL_GLEAN10017351" mRNA complement(join(<9962720..9962860,9963383..9963506, 9963790..9963896,9964426..9964524,9965290..9965398, 9966006..9966122,9966747..9966863,9970281..9970470, 9972421..9972611,9973172..9973394,9973681..9973783, 9976379..9976485,9978066..9978221,9979069..9979213, 9988820..9988984,9989489..9989591,9998721..9998897, 9999592..9999665,10000816..10000875,10017975..>10017983)) /locus_tag="PAL_GLEAN10017351" /product="Sortilin" CDS complement(join(9962720..9962860,9963383..9963506, 9963790..9963896,9964426..9964524,9965290..9965398, 9966006..9966122,9966747..9966863,9970281..9970470, 9972421..9972611,9973172..9973394,9973681..9973783, 9976379..9976485,9978066..9978221,9979069..9979213, 9988820..9988984,9989489..9989591,9998721..9998897, 9999592..9999665,10000816..10000875,10017975..10017983)) /locus_tag="PAL_GLEAN10017351" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Sortilin" /protein_id="ELK05863.1" /db_xref="InterPro:IPR002860" /db_xref="InterPro:IPR006581" /db_xref="UniProtKB/Swiss-Prot:Q99523" /translation="MGQHVFDDLSGSVSLSWVGDSTGIVLVLTTFHVPLVIMTFGQSK LYRRILKKCSILVDDIETAPKAKGSPSSRHTFSGFFLWLLVLTQVGGNPCRSFDLDQP TFPSSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKVILTAEVSGGSHGGRIFRS SDFAKNFVQTNLPFHPLTQMMYSPQNSDYLLALSTEDTTRRIHVSTDQGDTWSMAQLP SVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIIYSKSLDRHLYTTTGGE TDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWKHLRKPENSECDATAKNKNECS LHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGNPISLLICAEEMVGCVAGSVGDAIS VMIPDVYISHDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSHPINVIKFSTDEGQCW QTYMFTREPIYFTGLASEPGARSMNISIWGFTESFLTRQWVSYTIDFKDVLERNCEEK DYTIWLAHSTDPGDYGDGCILGYKEQFLRLRKSSVCQNGRDYVVTKQPSVCLCSLEDF LCDFGYFRPENDSKCVEQPELKGHDLEFCLYGREEHLITNGDFGYFRPENDSKCVEQP ELKGHDLEFCLYGREEHLITNGYRKIPGDRCQGGVNPAREVKDLKKKCTSNFLNPEKQ DSRPQGHSLSQNPASSPLGYIENTHPLSPTQKQNSRSNSVPIILATVGLMLVTVVAGV LIVKKYVCGGRFLVHRYSVLQQHAEANGVDGVDALDTASRTHKSGYHDDSDEGNEMEF KGNVLLTPLLHVLHGTCPRAPASSSINSHKVLGAVPGLCW" assembly_gap 9969807..9969928 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9986509..9986758 /estimated_length=250 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9989690..9989762 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10008490..10008499 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10018739..10019535 /estimated_length=797 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10023204..>10041084) /locus_tag="PAL_GLEAN10017352" mRNA complement(join(<10023204..10023281,10028860..10028946, 10029898..10030000,10030586..10030644,10030785..10030892, 10031776..10031843,10034050..10034176,10037211..10037277, 10041056..>10041084)) /locus_tag="PAL_GLEAN10017352" /product="Proteasome subunit alpha type-5" CDS complement(join(10023204..10023281,10028860..10028946, 10029898..10030000,10030586..10030644,10030785..10030892, 10031776..10031843,10034050..10034176,10037211..10037277, 10041056..10041084)) /locus_tag="PAL_GLEAN10017352" /note="GO_component: GO:0005839 - proteasome core complex [Evidence IEA]; GO_component: GO:0019773 - proteasome core complex, alpha-subunit complex [Evidence IEA]; GO_function: GO:0004175 - endopeptidase activity [Evidence IEA]; GO_function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]; GO_process: GO:0051603 - proteolysis involved in cellular protein catabolic process [Evidence IEA]" /codon_start=1 /product="Proteasome subunit alpha type-5" /protein_id="ELK05864.1" /db_xref="InterPro:IPR000426" /db_xref="InterPro:IPR001353" /db_xref="UniProtKB/Swiss-Prot:Q9Z2U1" /translation="MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSE GVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFT YNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSG TFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELA TVQPGQNFHMFTKEELEEVIKDI" assembly_gap 10050055..10050067 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10060764..10060828 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10067399..>10083919 /locus_tag="PAL_GLEAN10017353" mRNA join(<10067399..10067580,10068649..10068850, 10069771..10069962,10071300..10071448,10071569..10071747, 10077970..10078035,10078422..10078526,10078931..10079141, 10079438..10079724,10080321..10080403,10080767..10081020, 10081834..10082032,10082176..10082297,10082884..>10083919) /locus_tag="PAL_GLEAN10017353" /product="Ataxin-7-like protein 2" CDS join(10067399..10067580,10068649..10068850, 10069771..10069962,10071300..10071448,10071569..10071747, 10077970..10078035,10078422..10078526,10078931..10079141, 10079438..10079724,10080321..10080403,10080767..10081020, 10081834..10082032,10082176..10082297,10082884..10083919) /locus_tag="PAL_GLEAN10017353" /note="GO_component: GO:0008021 - synaptic vesicle [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Ataxin-7-like protein 2" /protein_id="ELK05865.1" /db_xref="InterPro:IPR001285" /db_xref="InterPro:IPR008253" /db_xref="InterPro:IPR013243" /db_xref="InterPro:IPR021128" /db_xref="UniProtKB/Swiss-Prot:Q5T6C5" /translation="MLLGQLRSSDSRKGFALPQLFAVFAFGCCGSYSGETGATVRCNN EPKDVSSIIVLFGYPFRLNRVQYEMPLCDDESTSKTMNLIGDFSAPAEFFVTLGIFSF FYTMAALVFYLRFHSLYTENRRFPLVDFCVTISFTFFWLVAAAAWGKGLTDVKGATQP SSLTAAMSVCHGDEAVCSAGATPSMGLANLSVLFGFINFFLWAGNCWFVFKETPWHGQ GKGQDQDQGPSQESTAEQGAVEKHFETSMDGQASAVGNLGSPPSGFISLPLLESRMAG AQCFWSTAWTQASYLVVWTLTASAAGAELEESNKNTKKLDAMTLIKEDMSIFGHCPAH DDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYARAPPPPPAPASSQKCHVVNGQG PACRAPGSTKTSSREKGQGSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHG IRVAPPSAFLSQPGSLTKDSPGKITMAPPSKEPPGRESIEIMPSEGPSHRADGSPPEK ELGGARLPPKTHRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRA KDFDVLVAELKANSRKGESPKEKSPGRKEPALERPHQEPLSSAQVVAAAAAPSSTFSA RAKQTYPYCALPRSRASSESELDDEGPCGGEGDPGLFPFPLPRGGAQASSEESEEEGT SEDLHLPADCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSS HMWKPACPASTPPTKDSLVPSYPAGSPSVAAACSQSECMGGSQAITSPLPANTPSPSF SKLPPSKASKLSKGKDGAELEAPSRKRKLSPGPTTFKRTCILEPTGKGKPGCRGLSAK TKTALGMGLNGTVGPRVKRAGPLDCRSSPHQPPTPVKASQLDNRGAAGQPAKVLPTSC LSEEEVAKKRKNLATYCRPVKAKHCQAGPPADAACSVRRKKPGPALAFEEKCSTLKVP AQLPEEQGQGRVRMDEGGVHGGNLTEKVLSECLRREGKREVESSWDTFSERWVSSLQG DPSFCLMGFSLAPALSLGVKKRLALPPPLTHPACASIKGPLSELAVALTLGTGATSVP " assembly_gap 10073335..10073450 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10075904..10076157 /estimated_length=254 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10086148..>10087904 /locus_tag="PAL_GLEAN10017354" mRNA join(<10086148..10086295,10086813..10086850, 10087401..>10087904) /locus_tag="PAL_GLEAN10017354" /product="Cytochrome b561 domain-containing protein 1" CDS join(10086148..10086295,10086813..10086850, 10087401..10087904) /locus_tag="PAL_GLEAN10017354" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Cytochrome b561 domain-containing protein 1" /protein_id="ELK05866.1" /db_xref="InterPro:IPR004877" /db_xref="InterPro:IPR006593" /db_xref="UniProtKB/Swiss-Prot:Q8N8Q1" /translation="MQTLEVGPVPAPTREPRLTRWLRRGSGILAHLVALGFTIFLTVL SRPGTSLFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARIGLHWVGQTLAVL CAALGLGFIISSKTRSELPHLVSWHSWVGALTLLATVGQALCGLCLLFPRAARVSRVA RLKLYHLTCGLVVYLIATVTVLLGMYSVWFQAQIKGAAWYLCLALPLYPALVIMHQIS SAYLPRKKIEM" gene complement(<10098375..>10099835) /locus_tag="PAL_GLEAN10017355" mRNA complement(<10098375..>10099835) /locus_tag="PAL_GLEAN10017355" /product="Amphoterin-induced protein 1" CDS complement(10098375..10099835) /locus_tag="PAL_GLEAN10017355" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Amphoterin-induced protein 1" /protein_id="ELK05867.1" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="UniProtKB/Swiss-Prot:Q86WK6" /translation="MQPQRDLRGLWLLLLSWFLLLLEVARAGRPAVSCPAACLCASNI LSCSKQQLPNVPHALPSYTALLDLSHNNLSRLRAEWTPTRLPHLHSLLLSHNHLNFIS SEAFSPVPNLRYLDLSSNQLRTLDESLFSGLQALEVLLLYNNHIMAVDRSAFEDMAQL QKLYLSQNQISRFPLELLRLPKLTLLDLSSNMLKTLPLPDLQKLHAWVKNGLYLHNNP LHCNCELYQLFSHWQYRQLSSVVDFREDLYCMSAKKLHNVFNLNCSEYKERAWEAHLG DTLTIHCDTRQQGMTKVWVTPSNERVLDVVANSTVTVFENGSLHFQGVQVEDGGVYTC YAMGEAFNETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSVVLVLIYLYLTPCRCW CRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEPAGPGQGQNGKL KPGNTLPVPEAAGKGQRRMSDPESVSSVFSDTPIVV" assembly_gap 10100039..10106460 /estimated_length=6422 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10106898..10107142 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10122291..10122406 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10135698..>10137053 /locus_tag="PAL_GLEAN10017356" mRNA <10135698..>10137053 /locus_tag="PAL_GLEAN10017356" /product="Putative G-protein coupled receptor 61" CDS 10135698..10137053 /locus_tag="PAL_GLEAN10017356" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Putative G-protein coupled receptor 61" /protein_id="ELK05868.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q8C010" /translation="MESSPIPQSSGNSSTLGRIPQTPGPSTASGVPEVGLRDVASESV ALFFMLLLDLTAVAGNAAVMAVIAKTPALRKFVFVFHLCLVDLLAALTLMPLAMLSSS ALFDHDLFGEVACRLYLFLSVCFVSLAILSVSAINVERYYYVVHPMRYEVRMTLGLVA SVLVGVWVKALAMASVPVLGRVSREEGAPSIPPGCSLQWSRNAYCQLFVVVFAILYFL LPLLLILVVYCSMFRVARVAAMQHGPLPTWMETPRQRSESLSSRSTMVTSSGAHQTTP HRTFGGGKAAVVLLAVGGQFLLCWLPYFSFHLYVALSAQPISTGQVENVVTWIGYFCF TSNPFFYGCLNRQIRGELSKQFVCFFKQAPEEELRLPSREGSIEENFLQFLQGTGCPT ESWVSRPLPSPKQEPAAVDFRIPGQIAEETSEFLEQQLTSDMIMSDSYLRPAPSPRPE S" gene <10141349..>10171561 /locus_tag="PAL_GLEAN10017357" mRNA join(<10141349..10141466,10157705..10157747, 10157859..10158000,10161798..10161955,10163625..10163753, 10166957..10167086,10167512..10167665,10171371..>10171561) /locus_tag="PAL_GLEAN10017357" /product="Guanine nucleotide-binding protein G(k) subunit alpha" CDS join(10141349..10141466,10157705..10157747, 10157859..10158000,10161798..10161955,10163625..10163753, 10166957..10167086,10167512..10167665,10171371..10171561) /locus_tag="PAL_GLEAN10017357" /note="GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_function: GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Guanine nucleotide-binding protein G(k) subunit alpha" /protein_id="ELK05869.1" /db_xref="InterPro:IPR001019" /db_xref="InterPro:IPR001408" /db_xref="InterPro:IPR011025" /db_xref="UniProtKB/Swiss-Prot:P08753" /translation="MGCTLSAEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGES GKSTIVKQMKIIHEDGYSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGEAARAD DARQLFVLAGSAEEGVMTPELAGVIKRLWRDGGVQACFCRSREYQLNDSASYYLNDLD RISQTNYIPTQQDVLRTRVKTTGIVETHFTFKELYFKMFDVGGQRSERKKWIHCFEGV TAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEE KIKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQF VFDAVTDVIIKNNLKECGLY" gene complement(<10180772..>10187834) /locus_tag="PAL_GLEAN10017358" mRNA complement(join(<10180772..10180962,10181501..10181654, 10182264..10182393,10182615..10182743,10184654..10184811, 10185410..10185551,10185831..10185873, 10187648..>10187834)) /locus_tag="PAL_GLEAN10017358" /product="Guanine nucleotide-binding protein G(t) subunit alpha-2" CDS complement(join(10180772..10180962,10181501..10181654, 10182264..10182393,10182615..10182743,10184654..10184811, 10185410..10185551,10185831..10185873,10187648..10187834)) /locus_tag="PAL_GLEAN10017358" /note="GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_function: GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Guanine nucleotide-binding protein G(t) subunit alpha-2" /protein_id="ELK05870.1" /db_xref="InterPro:IPR001019" /db_xref="InterPro:IPR001408" /db_xref="InterPro:IPR011025" /db_xref="UniProtKB/Swiss-Prot:P04696" /translation="MGSGVSAEDKELAKRSKELEKKLQEDADKEAKTVKLLLLGERDG KMSQRRRRPCSFLLILDGGAGESGKSTIVKQMKIIHQDGYSPEECLEYKSIIYGNVLQ SILAIIRAMSTLGIDYAEPSCADDGRQLNNLADSIEEGTMPPELVEVIRNLWKDGGVQ ACFDRAAEYQLNDSASYYLNQLDRITAPDYLPNEQDVLRSRVKTTGIIETKFSVKDLN FRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDDEVNRMHESLHLFNSI CNHKFFAATSIVLFLNKKDLFGEKIKKVHLSICFPEYDGNNSYEDAGNYIKSQFLDLN MRKDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCGLF" gene <10195342..>10205429 /locus_tag="PAL_GLEAN10017359" mRNA join(<10195342..10195432,10199417..10199547, 10199761..10199891,10200653..10200721,10200821..10200932, 10201172..10201358,10201601..10201742,10201831..10201920, 10202167..10202296,10202457..10202651,10202737..10202868, 10203074..10203237,10203522..10203648,10203746..10203909, 10204214..10204334,10204621..10204794,10204975..10205085, 10205220..>10205429) /locus_tag="PAL_GLEAN10017359" /product="AMP deaminase 2" CDS join(10195342..10195432,10199417..10199547, 10199761..10199891,10200653..10200721,10200821..10200932, 10201172..10201358,10201601..10201742,10201831..10201920, 10202167..10202296,10202457..10202651,10202737..10202868, 10203074..10203237,10203522..10203648,10203746..10203909, 10204214..10204334,10204621..10204794,10204975..10205085, 10205220..10205429) /locus_tag="PAL_GLEAN10017359" /note="GO_function: GO:0019239 - deaminase activity [Evidence IEA]; GO_process: GO:0009168 - purine ribonucleoside monophosphate biosynthetic process [Evidence IEA]" /codon_start=1 /product="AMP deaminase 2" /protein_id="ELK05871.1" /db_xref="InterPro:IPR001365" /db_xref="UniProtKB/Swiss-Prot:Q01433" /translation="MASYASGPGKPKAKYPFKKRASQQPSSAVPEARGGLGAPPLQSA RSLPGPAPCLKHFPLDLRTSMDGKCKEIAEELFSRSLAESELRSAPYEFPEESPIEQL EERRQRLERQISQDVKLEPDILLRAKQDFLKTDSDSDLQLYKEQGEGQGDRGLRERDM VLEREFQRVTISGEEKCGVPFTDLLDAAKSVVRALFIREKYMALSLQGFCTTTRRYLQ QLAEKPLETRTYEQGPDTPVSADAPVHPPALEQHPYEHCEPSTMPGDLGLGLRMVRGV VHVYTRRDPDEHCSEVELPYPDLQEFVADVNVLMALIINGPIKSFCYRRLQYLSSKFQ MHVLLNEMKELAAQKKVPHRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEI VHVEQGREQTLREVFESMNLTAYDLSVDTLDVHADRNTFHRFDKFNAKYNPIGESVLR EIFIKTDNRVSGKYFAHIIKEVMSDLEESKYQNAELRLSIYGRSRDEWDKLARWAVMH RVHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVHPASHPELHLFLE HVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTYANMAMLNHLRRQR GFHTFVLRPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQYLYYLAQIGIAMSPL SNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCD MCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRVGYRYETLCQEL ALITQAVQSEMLETIPEEPGVTMSPGPQ" assembly_gap 10208425..10208440 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10214853..10214893 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10224827..>10229580 /locus_tag="PAL_GLEAN10017360" mRNA join(<10224827..10224862,10225131..10225206, 10225604..10225668,10225964..10226045,10226146..10226246, 10227158..10227253,10227337..10227447,10229491..>10229580) /locus_tag="PAL_GLEAN10017360" /product="Glutathione S-transferase Mu 1" CDS join(10224827..10224862,10225131..10225206, 10225604..10225668,10225964..10226045,10226146..10226246, 10227158..10227253,10227337..10227447,10229491..10229580) /locus_tag="PAL_GLEAN10017360" /note="GO_function: GO:0004364 - glutathione transferase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Glutathione S-transferase Mu 1" /protein_id="ELK05872.1" /db_xref="InterPro:IPR003081" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR012336" /db_xref="InterPro:IPR017933" /db_xref="UniProtKB/Swiss-Prot:Q9TSM5" /translation="MTMTLGYWDIRGLAHAIRLLLEYTASNYEEKKYTMGDAPDYDRS QWLSEKFQLGLDFPNLPYLIDGSHRLTQSNAILRYIARKHNLCGETEEEKIRVDILEN EVMDVSNQLAGVCYSPDFEKLKPEYLKALPEKMKLFSQFLGKRSWFAADKPTYVDFLA YDILDLHRIFEPKYLDAFPNLKDFVVRLEGLEKISAYMKSSRFIPSPLYTKIAVWGNK " assembly_gap 10226673..10226785 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10239929..10239998 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10243659..>10246545) /locus_tag="PAL_GLEAN10017361" mRNA complement(join(<10243659..10243757,10244023..10244133, 10244223..10244318,10244664..10244764,10244858..10244939, 10245602..10245666,10246042..10246117, 10246495..>10246545)) /locus_tag="PAL_GLEAN10017361" /product="Glutathione S-transferase Mu 5" CDS complement(join(10243659..10243757,10244023..10244133, 10244223..10244318,10244664..10244764,10244858..10244939, 10245602..10245666,10246042..10246117,10246495..10246545)) /locus_tag="PAL_GLEAN10017361" /note="GO_function: GO:0004364 - glutathione transferase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Glutathione S-transferase Mu 5" /protein_id="ELK05873.1" /db_xref="InterPro:IPR003081" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="InterPro:IPR010987" /db_xref="InterPro:IPR012336" /db_xref="InterPro:IPR017933" /db_xref="UniProtKB/Swiss-Prot:Q9Z1B2" /translation="MSSSKSAVVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAP DYDRSQWLDVKFKLDLDFPNLPYLMDGKNKITQSNAILRYIARKHNMCGDTEEEKIRV DIMENQIMDFRMQLTRLCYNPDHEKLKPQYLEQLPVQLKQFSLFLGKFSWFAGEKLTF VDFLTYDVLDQNRMFEPKCLEEFPNLKAFMCRFEALEKIAAYMQSDRFFKMPINNKMA QWGQKRTC" assembly_gap 10246205..10246368 /estimated_length=164 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10248600..>10257748) /locus_tag="PAL_GLEAN10017362" mRNA complement(join(<10248600..10248777,10249289..10249362, 10249588..10249773,10249972..10250065,10253266..10253414, 10253718..10253792,10254032..10254093,10254185..10254299, 10255376..10255525,10255721..10255879,10257498..10257562, 10257718..>10257748)) /locus_tag="PAL_GLEAN10017362" /product="Epidermal growth factor receptor pathway substrate 8-like protein 3" CDS complement(join(10248600..10248777,10249289..10249362, 10249588..10249773,10249972..10250065,10253266..10253414, 10253718..10253792,10254032..10254093,10254185..10254299, 10255376..10255525,10255721..10255879,10257498..10257562, 10257718..10257748)) /locus_tag="PAL_GLEAN10017362" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Epidermal growth factor receptor pathway substrate 8-like protein 3" /protein_id="ELK05874.1" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR013625" /db_xref="UniProtKB/Swiss-Prot:Q91WL0" /translation="MSRPSSRAIYMHRKEYSHSLTSEPTHLQHRVEHLMTCKLGTQRV REPKDAMQKLQEMDAQGRVWSQDLILQVRDGWLQLLDIETKEELDSYQLDSIQAMDVA LNTCSYNSILSVTVQDPSLPGSSTLLFQCQEVGEVLNHVLRDIEVFAGQLKEAEANGN HKKKLRKKKKYQGGVTQAQYIDCFQKIKYSFNLLGKLAIHLEETTAPQFVHLIFQTLN LILSQCAKLDLASQVISPLLTPKAIDLLQSCLSPAESNLWKGLGVAWTTSRPVKPVLK MQVLYEFEARNSRELTVTQEEVLEVLDNSKRWWLVKNETGQRGYIPSNILAPLQAGGQ EHSRVPPSLDYPEAPRPVLGGGGEHSISAPVLRLSSRPEEVTAWLQAENFSTITVKTL GSLMGNQLLHIRPGELQMLCPQEAPQVLARLQAVRRMLGVRTLAFLTPSGNVG" assembly_gap 10263253..10263387 /estimated_length=135 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10267337..10275898 /estimated_length=8562 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10278030..10278081 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10280843..10281000 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10300719..10301823 /estimated_length=1105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10336022..10336087 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10347124..10347157 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10347554..10347592 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10349835..10349855 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10354771..10355226 /estimated_length=456 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10355956..10356035 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10363474..10363528 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10366875..10367003 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10371315..10371559 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10372419..10372429 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10374580..>10388569 /locus_tag="PAL_GLEAN10017363" mRNA join(<10374580..10374723,10376009..10376071, 10377630..10377800,10379854..10380001,10381188..10382206, 10382762..10382814,10388452..>10388569) /locus_tag="PAL_GLEAN10017363" /product="Macrophage colony-stimulating factor 1" CDS join(10374580..10374723,10376009..10376071, 10377630..10377800,10379854..10380001,10381188..10382206, 10382762..10382814,10388452..10388569) /locus_tag="PAL_GLEAN10017363" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005125 - cytokine activity [Evidence IEA]; GO_function: GO:0008083 - growth factor activity [Evidence IEA]" /codon_start=1 /product="Macrophage colony-stimulating factor 1" /protein_id="ELK05875.1" /db_xref="InterPro:IPR008001" /db_xref="InterPro:IPR009079" /db_xref="UniProtKB/Swiss-Prot:P09603" /translation="MTSSLSQTWLGPRLLLLCLLVTRSITEEESNHCSYMIGDGHLQL LQQLIDSQMETSCPIGFDFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFKDNTSNANA ILKLQELSVSLKVCFPKDNEEPDKACVRPFSETPLQLLEKIKNVFNETKNLLKKDQNI FSKNCSNSFAKCSSQDVVTKPDCNCLYPKATPSSDLASVSPQQPLAPSMAPMAGLTWA DSKGTEDSSLLPSEQPLRAVDLSSAKQRPPRSTCQSFETPETPGVEGSPTGSSPEPLS SVEAPVSGMEDLLDSVLGTNWGLEEASGEASEGSVPRGAELSSSRLGGGSVQAEATRP RDPFSATSLLSTSAEEPQSVDVTGSPLPKVGPGRPTGQAQRHAFEKTGRLSALPRDHQ EPGSAKTPSLRPQSLGGPSTLSAGPSLPSSHSWGNVLPLGEPEGKRSTRDRRSPAELE GGPASEGAAKPPADFNSVPLTDAGHEQPPPEPQRHGFAFRLLIPSGVILVLLAMGGLL FYRCRRRSRQEIQTVDSPMEQPEGRQAGQVRNQEGLGICFHVCLEDHRFLGQPVAGAL ELSSR" assembly_gap 10384278..10384483 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10404688..10404735 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10416311..10416335 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10418695..>10418946 /locus_tag="PAL_GLEAN10017364" mRNA <10418695..>10418946 /locus_tag="PAL_GLEAN10017364" /product="hypothetical protein" CDS 10418695..10418946 /locus_tag="PAL_GLEAN10017364" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05876.1" /translation="MTKRRSPRPLPLPELPVLDVASPPSTLTLRACVRAAEVSARAGR SSVLLLGLLSLLSLSRCPGRPKGRGAGPSTSAPDALSGT" gene <10419074..>10450607 /locus_tag="PAL_GLEAN10017365" mRNA join(<10419074..10419187,10439368..10439479, 10441743..10441886,10442904..10443004,10443420..10443522, 10444700..10444794,10445384..10445490,10446298..10446414, 10446672..10446735,10447539..10447627,10447987..10448057, 10448419..10448513,10448598..10448696,10449099..10449167, 10449305..10449383,10450483..>10450607) /locus_tag="PAL_GLEAN10017365" /product="Putative adenosylhomocysteinase 2" CDS join(10419074..10419187,10439368..10439479, 10441743..10441886,10442904..10443004,10443420..10443522, 10444700..10444794,10445384..10445490,10446298..10446414, 10446672..10446735,10447539..10447627,10447987..10448057, 10448419..10448513,10448598..10448696,10449099..10449167, 10449305..10449383,10450483..10450607) /locus_tag="PAL_GLEAN10017365" /note="GO_function: GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]; GO_process: GO:0006730 - one-carbon metabolic process [Evidence IEA]" /codon_start=1 /product="Putative adenosylhomocysteinase 2" /protein_id="ELK05877.1" /db_xref="InterPro:IPR000043" /db_xref="InterPro:IPR015878" /db_xref="UniProtKB/Swiss-Prot:Q80SW1" /translation="MPDAMPLPGVGEELKQAKEIEDAEKYSFMATVTKAPKKQIQFAD DMQEFSKFPTKTGRRSLSRSISQSSTDSYSSAASYTDSSDDEVSPREKQQTNSKGSSN FCVKNIKQAEFGRREIEIAEQDMSALISLRKRAQGEKPLAGAKIVGCTHITAQTAVLI ETLCALGAQCRWSACNIYSTQNEVAAALAEAGVAVFAWKGESEDDFWWCIDRCVNMDG WQANMILDDGGDLTHWVYKKYPNVFKKIRGIVEESVTGVHRLYQLSKAGKLCVPAMNV NDSVTKQKFDNLYCCRESILDGLKRTTDVMFGGKQVVVCGYGEVGKGCCAALKALGAI VYITEIDPICALQACMDGFRVVKLNEVIRQVDVVITCTGNKNVVTREHLDRMKNSCIV CNMGHSNTEIDVTSLRTPELTWERVRSQVDHVIWPDGKRVVLLAEGRLLNLSCSTVPT FVLSITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLPSFDAHLTELTDD QAKYLGLNKNGPFKPNYYR" assembly_gap 10436798..10436822 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10438163..10438312 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10455816..10455864 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10459316..>10476094 /locus_tag="PAL_GLEAN10017366" mRNA join(<10459316..10459495,10461943..10462012, 10462699..10462773,10463204..10463338,10463426..10463546, 10464377..10464445,10465420..10465526,10465633..10465760, 10466706..10466888,10467258..10467475,10468453..10468518, 10468643..10468706,10469797..10469868,10470293..10470367, 10470677..10470774,10472050..10472176,10472387..10472487, 10473214..10473280,10473837..10473941,10474576..10474780, 10475847..>10476094) /locus_tag="PAL_GLEAN10017366" /product="Protein FAM40A" CDS join(10459316..10459495,10461943..10462012, 10462699..10462773,10463204..10463338,10463426..10463546, 10464377..10464445,10465420..10465526,10465633..10465760, 10466706..10466888,10467258..10467475,10468453..10468518, 10468643..10468706,10469797..10469868,10470293..10470367, 10470677..10470774,10472050..10472176,10472387..10472487, 10473214..10473280,10473837..10473941,10474576..10474780, 10475847..10476094) /locus_tag="PAL_GLEAN10017366" /codon_start=1 /product="Protein FAM40A" /protein_id="ELK05878.1" /db_xref="InterPro:IPR012486" /db_xref="InterPro:IPR021819" /db_xref="UniProtKB/Swiss-Prot:Q9GLZ5" /translation="MEPAAGGPSPLIMNNKQPQPPPPPPPATAQPPPGAPRAGGGLLP GGKAREFNRNQRKDSEGYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFE EDFRIHVTDKKWTELDTNQHRTHAMRLLDGLEVTAREKRLKVARSILYVAQGTFGECS SEAEVQSWMRYNVFLLLEVGTFSALVELLNMEIDNSAACSSAVRKPAISLADSTDLRV LLNIMYLIVETVHQECEGDKAEWRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSG HAPHFPMKKVLLLLWKTVLCTLGGFEELQSMKAEKRTILGLPPLPEDSIKVIRNMRAA SPPASASDLIEQQQKRGRREHKALIKQDNLDAFNERDPYKADDSREEEEENDDDNSLE GETFPLERDEVMPPPLQHPQTDRLTCPKGLPWAPKVREKDIEMFLESSRSKFIGYTLG SDTDTVVGLPRPIHESIKTLKQHKYTSIAEVQAQMEEEYLRSPLSGGEEEVEQVPAET LYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINILADVLPEEMPTTVLQSMKLGVD VNRHKEVIVKAISAVLLLLLKHFKLNHIYQFEYMAQHLVFANCIPLILKFFNQNIMSY ITAKNSISVLDYPHCVVRELPELTAESLEAGDNNQFCWRNLFSCINLLRILNKLTKWK HSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIY QKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNARRYDRTHSNPDFLPVDNC LQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ" assembly_gap 10476585..10476660 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10482829..>10492818) /locus_tag="PAL_GLEAN10017367" mRNA complement(join(<10482829..10483149,10483492..10483620, 10486399..10486715,10491554..10491656, 10492741..>10492818)) /locus_tag="PAL_GLEAN10017367" /product="Homeobox protein aristaless-like 3" CDS complement(join(10482829..10483149,10483492..10483620, 10486399..10486715,10491554..10491656,10492741..10492818)) /locus_tag="PAL_GLEAN10017367" /note="GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Homeobox protein aristaless-like 3" /protein_id="ELK05879.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR009057" /db_xref="UniProtKB/Swiss-Prot:O95076" /translation="MAGLGQQALRSVLQAGSLRDVPRHFQPYLPEPAKPPAKYLQDLG PAPALNGGHFYEGPEEAEEKASKAASFPQLPLDCQGGPRDGPSNLQGSPGPCLARLRV PLSPGLPDSMELVKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDL TEARVQVWFQNRRAKWRKRERYGKIQEGRNPFTSAYDISVLPRTDSHPQLQNSLWPSP GSGSPASPCLVSPEGIPSPCMSPYSHPHGNVAGFMGVPASPGAHPGIYSIHSFSPALG GHSFEPSPDGNYKSPSLXXXXXXXXXXXXXXDQTCGQAD" assembly_gap 10482857..10482898 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10489773..10489925 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10491794..10491965 /estimated_length=172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10497092..10497147 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10503630..10504315 /estimated_length=686 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10518470..10518607 /estimated_length=138 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10524886..10524929 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10527805..>10528320 /locus_tag="PAL_GLEAN10017368" mRNA <10527805..>10528320 /locus_tag="PAL_GLEAN10017368" /product="Ubiquitin-like protein 4B" CDS 10527805..10528320 /locus_tag="PAL_GLEAN10017368" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Ubiquitin-like protein 4B" /protein_id="ELK05880.1" /db_xref="InterPro:IPR000626" /db_xref="InterPro:IPR019955" /db_xref="UniProtKB/Swiss-Prot:Q2T9Q2" /translation="MFLTVKLLVGRKCSLKVSGQESVAMLKKLVSERLQVPEERQHLL FRGQLLADDKCLSDYCIGPNASISVIVRPLENTVPEEALQPQPLWHQLAQVLAKHFGP QDAKAVLQLLRQEHEERLQRISPGHLEQLARDLLTGEPPVETAEDMEPEAVASKPADE QEIEEEEKADQ" assembly_gap 10530564..10530985 /estimated_length=422 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10553061..>10553753) /locus_tag="PAL_GLEAN10017369" mRNA complement(<10553061..>10553753) /locus_tag="PAL_GLEAN10017369" /product="hypothetical protein" CDS complement(10553061..10553753) /locus_tag="PAL_GLEAN10017369" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05881.1" /translation="MSSPRARCWALRMRQRSAGSRAPSPGNGGRSGWRSPGPRRAGLI PRQHRLAPRFLGLQAGAGPEQLKLRWLAGFKAKWGAARDSPVPRGPLRGLGLCSPAEE LQSPTGGGHKAPPPPTDSWSLVATDTGRGWEGARSRAPAHATLLAPRSLPRRRSRPSP SPRRAPPSGERPGDSRPAAKGARGAAGAGAECRPPCALVAPALRSGTELGGAQRALFP RFRKGHPGGGAP" assembly_gap 10565784..10565831 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10567724..>10594759 /locus_tag="PAL_GLEAN10017370" mRNA join(<10567724..10568009,10571305..10571462, 10573206..10573332,10574077..10574258,10575925..10576035, 10588756..10588997,10589265..10589457,10591269..10591461, 10592048..10592207,10593738..10593900,10594391..>10594759) /locus_tag="PAL_GLEAN10017370" /product="Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4" CDS join(10567724..10568009,10571305..10571462, 10573206..10573332,10574077..10574258,10575925..10576035, 10588756..10588997,10589265..10589457,10591269..10591461, 10592048..10592207,10593738..10593900,10594391..10594759) /locus_tag="PAL_GLEAN10017370" /note="GO_component: GO:0005887 - integral to plasma membrane [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO_process: GO:0006836 - neurotransmitter transport [Evidence IEA]" /codon_start=1 /product="Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4" /protein_id="ELK05882.1" /db_xref="InterPro:IPR000175" /db_xref="InterPro:IPR002438" /db_xref="UniProtKB/Swiss-Prot:Q9H1V8" /translation="MPKNSKVTQREHSGEHVTESVADLLALEEPVDYKQSVLNVAGGA GGKQEAAEEELDAEDRPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPY LVLLIIIGIPLFFLELAVGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVI IGWSIFYFFKSFQYPLPWSECPIRRNRTVAVVEAECEKSSATTYFWYREALDISNSIS ESGGLNWKMTLCLLVAWTIVGMAVVKGIQSSGKVMYFSSLFPYVVLACFLVRGLLLRG AVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDAA LVSFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLHTNVLSQDLIPPHV NFSHLTTKDYTEMYKVIMTVKEDRFSALGLDPCLLEDELDKSVQGTGLAFIAFTEAMT HFPASPFWSVMFFLMLINLGLGSMIGTMAGITTPIIDTFKVPKEIFTVGCCVFAFFVG LLFVQRSGNYFVTMFDDYSATLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFRPYR FYFYMWKFVSPLFMAVLTTASVIQLGVTPPGYSAWIKEEAAERYLYFPNWAMALLITL IVVATLPIPVVFVLRHFHLLSDGSNTLSVSYKKGRMMKDISNLEENDETRFILSKVPS EAPSPMPTHRSYLGPGSTSPLEPSGNPNGRYGSGYLLASTPESEL" assembly_gap 10588465..10588524 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10601686..10601745 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10602270..10602300 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10606527..10606745 /estimated_length=219 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10607015..10607064 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10607538..>10623005 /locus_tag="PAL_GLEAN10017372" mRNA join(<10607538..10608218,10618905..10619841, 10622659..>10623005) /locus_tag="PAL_GLEAN10017372" /product="Potassium voltage-gated channel subfamily C member 4" CDS join(10607538..10608218,10618905..10619841, 10622659..10623005) /locus_tag="PAL_GLEAN10017372" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily C member 4" /protein_id="ELK05883.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003091" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR003974" /db_xref="InterPro:IPR005405" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR021105" /db_xref="UniProtKB/Swiss-Prot:Q03721" /translation="MISSVCVSSYRGRKSGNKPPSKTCLKEEMAKGEASEKIIINVGG TRHETYRSTLRTLPGTRLAWLADPDGGGRPESDGGGAGSSGSSGGGGGCEFFFDRHPG VFAYVLNYYRTGKLHCPADVCGPLFEEELAFWGIDETDVEPCCWMTYRQHRDAEEALD IFESPDGGGGGAGPGDEAGEDERELALQRLGPHEGGVGPGAGAGGCRGWQPRMWALFE DPYSSRAARVVAFASLFFILVSITTFCLETHEAFNIDRNVTEVHRVGNTTSVRFRREV ETEPILTYIEGVCVLWFTLEFLVRIACCPDTLDFVKNLLNIIDFVAILPFYLEVGLSG LSSKAARDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALG VLIFATMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSG MLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKRKKHVPRPPQLESPMY CKSEETSPRDSTYSDTSPPAQEEGVVERKRADSKQNGDANAVLSDEEEGAGLTQPLAS APIPEERRALRRAGTRDRNKKAAACFLLSAGDYACADGSVRKGMAPQAGQVGSPRGAE SPQCPPQAMRSPPPLRPWPPSPLPWMRPHF" assembly_gap 10634909..10634992 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10637062..10637318 /estimated_length=257 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10645190..10645258 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10663110..10663129 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10703550..>10709672 /locus_tag="PAL_GLEAN10017373" mRNA join(<10703550..10706286,10709566..>10709672) /locus_tag="PAL_GLEAN10017373" /product="Putative RNA-binding protein 15" CDS join(10703550..10706286,10709566..10709672) /locus_tag="PAL_GLEAN10017373" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Putative RNA-binding protein 15" /protein_id="ELK05884.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR010912" /db_xref="InterPro:IPR012921" /db_xref="InterPro:IPR016194" /db_xref="UniProtKB/Swiss-Prot:Q96T37" /translation="MKGKERSPVKPKRSRGGEDSTSRGERSKKLGGSGGSNGSSSGKT DSGGGSRRSLHLDKSSSRGGSREYDTGGGSSSSRLHSYSSPSTKNSSGGGESRSSSRG GGGESRSSGAASSAPGGGDGGEYKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKI SHLSGSGSGDERVAFVNFRRAEDARAAKHARGRLVLYDRPLKIEAVYVSRRRSRSPLD KDNYPPSSSVVGASVGGHRHPPGGGGGGQRSLSPGGAALGYRDYRLQQLALGRLPPPP PPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFREVDEISPEDDQRANRTLF LGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLAMS GKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWA YIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQPLPLTHYELVTD AFGHRAPDPLRGARDRTPPLLYRDRDRDLYTDSDWVPPPPPVRERSTRTAATAVPAYE PLDSLDRRRDGWSLDRDRGERDLPSSRDQPRKRRLPEESGGRHLDRSPESDRPRKRHC APSPDRSPDLSSSRDRYNSDNDRSSRLLLLERPSPIRDRRGSLEKSQGDKRDRKNSAS AERDRKHRTAAPTEGKSPLKKEDRSDGSAASTSTASSKLKSPSQKQDGGTAPAAAASP KLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSATSDTATSTQRPLRNLVSYLKQK QAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRVH GFEVGVRYEKKKRREVELTLLTSGYSDIPKGRK" assembly_gap 10707581..10707636 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10708139..10708190 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10710849..>10740510) /locus_tag="PAL_GLEAN10017374" mRNA complement(join(<10710849..10711039,10731976..10732113, 10732450..10732543,10733637..10733848,10735904..10736011, 10737317..10737478,10737653..10737796,10738532..10738664, 10740478..>10740510)) /locus_tag="PAL_GLEAN10017374" /product="Monocarboxylate transporter 5" CDS complement(join(10710849..10711039,10731976..10732113, 10732450..10732543,10733637..10733848,10735904..10736011, 10737317..10737478,10737653..10737796,10738532..10738664, 10740478..10740510)) /locus_tag="PAL_GLEAN10017374" /note="GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Monocarboxylate transporter 5" /protein_id="ELK05885.1" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR016196" /db_xref="UniProtKB/Swiss-Prot:O15374" /translation="MEMGKVLIIQQVNVFVVGMIKTFAIFFVVFQEEFESTSEQTGWI GSIMSSLSIAAGPLVAIIADTYGDKTVSILGAFLISGGFLISSQATSIPFLCVTIGVL PGLGSAFLYQVAAVLISKYFKKRLALCTAIARSGMGLTFLLAPFTKFLIDQYDWTGAL IILGAIILNLVPTSMLLRPIHITSNSNSDIKDEGITESVSQIIFGWIADRNWIRKYHY YKSYLIGCCITNLFAPLATTFPLLMTYTIFSAIFSGGHLALIMPVLVDLCEESVTHRF YGLAFFFAGIAILPGPPIAGVTFIELESCEPDPIALQMCHVAFLGFSTSLTFKEGCRP FIFYRTKATPALQTSKAPDSCTVVRLNGACPGFLRASKQHHFLIKLRTEKRMIPFTAN KGVTVTLVILQN" assembly_gap 10743451..10743498 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10750736..>10754444) /locus_tag="PAL_GLEAN10017376" mRNA complement(join(<10750736..10750796,10751429..10751546, 10753484..10753545,10754410..>10754444)) /locus_tag="PAL_GLEAN10017376" /product="Hepatitis B virus X-interacting protein like protein" CDS complement(join(10750736..10750796,10751429..10751546, 10753484..10753545,10754410..10754444)) /locus_tag="PAL_GLEAN10017376" /codon_start=1 /product="Hepatitis B virus X-interacting protein like protein" /protein_id="ELK05886.1" /db_xref="UniProtKB/Swiss-Prot:Q66X52" /translation="MEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDEHAGV ISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS" gene <10779704..>10783313 /locus_tag="PAL_GLEAN10017377" mRNA join(<10779704..10779799,10782384..10782509, 10783194..>10783313) /locus_tag="PAL_GLEAN10017377" /product="Prokineticin-1" CDS join(10779704..10779799,10782384..10782509, 10783194..10783313) /locus_tag="PAL_GLEAN10017377" /codon_start=1 /product="Prokineticin-1" /protein_id="ELK05887.1" /db_xref="InterPro:IPR009523" /db_xref="UniProtKB/Swiss-Prot:P58294" /translation="MEFGFQVTMRGAMQVSIVLLLVTVSDGAVITGACERDVQCGTGT CCAVSLWLRGVRMCTPLGRAGQECHPGSHKIPFFRKRQHHSCPCLPSLLCARRPDGRY RCSADLKSIHF" assembly_gap 10791387..10791532 /estimated_length=146 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10798147..>10809001 /locus_tag="PAL_GLEAN10017378" mRNA join(<10798147..10798208,10800303..10800453, 10801394..10801511,10802395..10802513,10804476..10804675, 10806058..10806171,10806938..10807082,10808864..>10809001) /locus_tag="PAL_GLEAN10017378" /product="Chymosin" CDS join(10798147..10798208,10800303..10800453, 10801394..10801511,10802395..10802513,10804476..10804675, 10806058..10806171,10806938..10807082,10808864..10809001) /locus_tag="PAL_GLEAN10017378" /note="GO_function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Chymosin" /protein_id="ELK05888.1" /db_xref="InterPro:IPR001461" /db_xref="InterPro:IPR012848" /db_xref="InterPro:IPR021109" /db_xref="UniProtKB/Swiss-Prot:P00794" /translation="MKCLVVLLAVLTLTQGSGITRVPLHKGKSLRKALKERGLLEDFL RTHRYAISKENSGVGKVAREPLVNYLDSQYFGKISIGTPPQDFTVVFDTGSSDLWVPS VYCKSDACKNHRRFNSSESSTFQKLGQPLSIQYGTGSMEGILGSDTVTVSNIVDSRQT VGLSTQEPGDVFTYFEFDGILGLAYPSLAAKDSVPVFDNMMKHHLVAQDLFSVYMSRN DQGSMLTLGAIDSSYYRGSLHWVPVTVREYWQFTVDSVTVDGVVVACDGGCQAILDTG TSMLVGPSSDILNIQQAIGATEDQYGLDMDFCTSGFQGEDDSQLWILGDVFIREYFSV FDRANNRVGLAKAI" assembly_gap 10812496..10812546 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10814843..10815180 /estimated_length=338 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10816309..10816328 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10824488..>10826023) /locus_tag="PAL_GLEAN10017379" mRNA complement(<10824488..>10826023) /locus_tag="PAL_GLEAN10017379" /product="Potassium voltage-gated channel subfamily A member 10" CDS complement(10824488..10826023) /locus_tag="PAL_GLEAN10017379" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily A member 10" /protein_id="ELK05889.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003091" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR003972" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/Swiss-Prot:Q16322" /translation="MDVCGWKEMEVALVNFDNSDEIQEQPGYTTDFDPTSPKGRPGSS TFSNWRILISDSTNHEMAFSKHPEDYGDPPGPEPAVMSEGNQRVIINIAGLRFETQLR TLDQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPID VFADEITFYELGSEAMDQFREDEGFIKDPETLLPTNDFHQQFWLLFEYPESSSAARGV AVVSVLVVIISITIFCLETLPEFREDRELKAAKDSSLNTSKTGLSHTMFTDPFFMVES TCIVWFTFELALRFVVCPSKTGFFRNIMNVIDIISIIPYFATVITELVQETEPSAQQN MSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSA VYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPITAGGKIVGILCAIAGVLTIA LPVPVIVSNFNYFYHRETENEEKQNIPREINRILNSAGSRMGSTDSLSKSNGGCSAEK SRR" assembly_gap 10830375..10830390 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10836088..10836142 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10850444..10850467 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10862988..10863039 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10884571..10885219 /estimated_length=649 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10894455..>10895444) /locus_tag="PAL_GLEAN10017381" mRNA complement(<10894455..>10895444) /locus_tag="PAL_GLEAN10017381" /product="Potassium voltage-gated channel subfamily A member 2" CDS complement(10894455..10895444) /locus_tag="PAL_GLEAN10017381" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily A member 2" /protein_id="ELK05890.1" /db_xref="InterPro:IPR003091" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR004049" /db_xref="InterPro:IPR005821" /db_xref="UniProtKB/Swiss-Prot:P63142" /translation="MVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSNSTIGYQQ STSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGT ELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGL LIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGK IVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKK SRSASTISKSDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV" gene complement(<10895524..>10895955) /locus_tag="PAL_GLEAN10017382" mRNA complement(<10895524..>10895955) /locus_tag="PAL_GLEAN10017382" /product="Potassium voltage-gated channel subfamily A member 2" CDS complement(10895524..10895955) /locus_tag="PAL_GLEAN10017382" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily A member 2" /protein_id="ELK05891.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003972" /db_xref="InterPro:IPR004050" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/Swiss-Prot:P16389" /translation="MTVATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRF ETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPV NVPLDIFSEEIRFYELGEEAXXXXXXXXXXXXXXXXXXXRK" assembly_gap 10895534..10895590 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10898197..10898578 /estimated_length=382 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10912973..10913031 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10954722..>10956038) /locus_tag="PAL_GLEAN10017383" mRNA complement(<10954722..>10956038) /locus_tag="PAL_GLEAN10017383" /product="Potassium voltage-gated channel subfamily A member 3" CDS complement(10954722..10956038) /locus_tag="PAL_GLEAN10017383" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily A member 3" /protein_id="ELK05892.1" /db_xref="InterPro:IPR003091" /db_xref="InterPro:IPR003131" /db_xref="InterPro:IPR003968" /db_xref="InterPro:IPR003972" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR011333" /db_xref="UniProtKB/Swiss-Prot:P16390" /translation="MRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIF SEEIRFYQLGEEAMEKFREDEGFLREEERPLPRRDFQRQVWLLFEYPESSGPARGIAI VSVLVILISIVIFCLETLPEFRYEDYPASPSQELFEAASNSTSGAPAGASSFSDPFFV VETLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQ QAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS SAVYFAEADDPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLT IALPVPVIVSNFNYFYHRETEGEEQAQYMHVGSCQHLSPSAEELRKARSNSTLSKSEY MVMEEGGMNHSAFPQTPFKTGNSTATCTTNNNPNSCVNIKKIFTDV" assembly_gap 10956198..10956716 /estimated_length=519 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10969864..10969880 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10988449..10992414 /estimated_length=3966 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10999287..10999338 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11048737..11049126 /estimated_length=390 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11050854..11050892 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11057161..>11058111 /locus_tag="PAL_GLEAN10017384" mRNA <11057161..>11058111 /locus_tag="PAL_GLEAN10017384" /product="Olfactory receptor 11A1" CDS 11057161..11058111 /locus_tag="PAL_GLEAN10017384" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004984 - olfactory receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Olfactory receptor 11A1" /protein_id="ELK05893.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000725" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q9GZK7" /translation="MVNLSWENQSSVVEFVLRGFSSTRQLNIFLFMMFLLFYILTVSG NILIVLLVLFNHHLHTPMYFFLGNLSFLEIWYTSNIVPKMLLIIIAKQKTISVAGCLT QFYFFGSLAATECLLLAVMSYDRYLAICQPLRYPMLMTGHLCIGLAASSWLCCFLLTA ITMALLSRLTFCGPNEIDHFFCDFTPLVHLSCMDTSLTETISYATSSAVTLIPFFLIT ASYSCILAAILRIPSGTGRQKAFSTCSSHLTMVTVFYGTLIATYLVPSANSSRLWHKG SSLLYTILTPMFNPIIYSLRNRDIHEALKKCFSQKPGFLR" gene <11081933..>11092767 /locus_tag="PAL_GLEAN10017385" mRNA join(<11081933..11081995,11082857..11083045, 11084419..11084493,11085098..11085172,11085746..11085841, 11090705..11090785,11092696..>11092767) /locus_tag="PAL_GLEAN10017385" /product="Leukocyte surface antigen CD53" CDS join(11081933..11081995,11082857..11083045, 11084419..11084493,11085098..11085172,11085746..11085841, 11090705..11090785,11092696..11092767) /locus_tag="PAL_GLEAN10017385" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Leukocyte surface antigen CD53" /protein_id="ELK05894.1" /db_xref="InterPro:IPR000301" /db_xref="InterPro:IPR008952" /db_xref="InterPro:IPR018499" /db_xref="UniProtKB/Swiss-Prot:P19397" /translation="MGMSSLKLLKYVLFFFNLLFWFCGCCILGFGIYFLIHNDFGVLF HNLPSLTLGNVLIIIGSIIMVVAFLGCMGSIKENKCLLMSFFVLLLIILLAEVTLAIL LFVYEQKFFVLLLIILLAEVTLAILLFVYEQKLNKSAAEGLTDSIQRYHSDNNTKVAW DSIQKHLQCCGVNGTSDWTGSPPASCPSDPQVKVLGMSFALTLNCQIDKTSQALGL" assembly_gap 11086242..11086295 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11105928..11108826 /estimated_length=2899 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<11118890..>11122643) /locus_tag="PAL_GLEAN10017386" mRNA complement(join(<11118890..11119327,11120151..11120417, 11121582..>11122643)) /locus_tag="PAL_GLEAN10017386" /product="hypothetical protein" CDS complement(join(11118890..11119327,11120151..11120417, 11121582..11122643)) /locus_tag="PAL_GLEAN10017386" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05895.1" /db_xref="UniProtKB/Swiss-Prot:Q5T3J3" /translation="MTVKSPVLPSGHHLQIPAHAEVKSVPASSLPPSVQQKILATATT STSGTVEASQIPSVIYVSPVNTVKNVVTKNFQHIYPKPVTEIAKPVILNATQIPMNVA KETQLKGGQHSQAAPVKWIFQENLQPCTPSLVPVKSSNNVASKILKSFVDKKNSGDNS INMPPLSTVSHSGTQSKSMPIKDNALVMFNGKVYLLAKKGTDVLPSQIDQQNSVSPDI PPRKAISQIVSSSPVTKISREVVNFVLAKNKSSQMETKSLSDTQLASMANLRAEKNKK VEKPSLSAPNPHNLNPSINYLKESKTLCVKADFPDGFSTGQNAPRKGNIIQSIEKISS SVDATTVTSQQCVFRDQEPKIQNEMASTLEKVTQDRNDKKNPQGRSHKAAYLKTDAEF KKIFGLTKELRVCLTRIPDRLGFGEGFGSFRSLAKSDRDTEFIVKENEKKQGFDKKRK ARSIKKMDHTKKRKTESVYNTAVNGGTNVTSSQLISSLLPTSDVSHRNILTSSNKTRD EKRTEVEHCPQENQEKSTLSSNADFEQSHSFNKNYTEDIFPMTPPELEETIRDEKIRR LKQMLREKEAALEEMRKKMHQK" assembly_gap 11135808..11137533 /estimated_length=1726 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11139375..11139409 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11148907..11150019 /estimated_length=1113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11158517..11159353 /estimated_length=837 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11161156..11162831 /estimated_length=1676 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<11175518..>11243943) /locus_tag="PAL_GLEAN10017387" mRNA complement(join(<11175518..11175625,11176160..11176252, 11177221..11177303,11227801..11228040,11228376..11228460, 11228886..11228927,11231752..11231929,11234273..11234421, 11235609..11235749,11236818..11236895,11237598..11237667, 11238346..11238458,11239321..11239496, 11243886..>11243943)) /locus_tag="PAL_GLEAN10017387" /product="DENN domain-containing protein 2D" CDS complement(join(11175518..11175625,11176160..11176252, 11177221..11177303,11227801..11228040,11228376..11228460, 11228886..11228927,11231752..11231929,11234273..11234421, 11235609..11235749,11236818..11236895,11237598..11237667, 11238346..11238458,11239321..11239496,11243886..11243943)) /locus_tag="PAL_GLEAN10017387" /codon_start=1 /product="DENN domain-containing protein 2D" /protein_id="ELK05896.1" /db_xref="InterPro:IPR001194" /db_xref="InterPro:IPR005112" /db_xref="InterPro:IPR005113" /db_xref="UniProtKB/Swiss-Prot:Q9H6A0" /translation="MDGLGRRLRASLRLKRGRGGSAQDNSEEAAKESERAQEHCLTNF AGGQHFFEYLLVVSLKKRRSGEDYEPTITYQFPKRENLLRGQQEEEERLLSAIPLFCF PDGNEWAPLTEYPRETFSFVLTNVDGSRKIGYCRRLLPAGPGPRLPKVYCIISCVGCF GLFSKILDEVEKRHQISMAVIYPFMQGLREAAFPAPGKTVTLKSFIPDSGTEFISLTR PLDSHLEHVDFNSLLQCLSLEQIVQIFASAVLERRLIFLAEDLSTLSQCIHAAAALLY PFSWAHTYIPVVPESLLATVCCPTPFMVGVQMRFLQEVTESPMEEVLLVNLREGTFLM SVGDEKDILPPKLQDDILDALGQGINDLQTSEQINEHVSGPFVQFFVKTVGHYASYIK REANGQGHFQERAFYKALNSKANRRFVKKFVKTQLFSLFIQEAEKSKNPPAVLTCSSL LYSGSFGTDIVQKLHWNPKDKGYVLHMITTAAEWSMSFSFFGFFLTYIRDFQKISLRV ETNLHGLTLYDTSPCPINNERTRLLTRDL" assembly_gap 11191570..11191626 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11192318..11192381 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11255103..11255140 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11259850..11259860 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11263665..11263745 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11273716..>11278470 /locus_tag="PAL_GLEAN10017390" mRNA join(<11273716..11273807,11274349..11274405, 11274503..11274668,11274916..11275082,11275208..11275439, 11275680..11275799,11278276..>11278470) /locus_tag="PAL_GLEAN10017390" /product="Acidic mammalian chitinase" CDS join(11273716..11273807,11274349..11274405, 11274503..11274668,11274916..11275082,11275208..11275439, 11275680..11275799,11278276..11278470) /locus_tag="PAL_GLEAN10017390" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_function: GO:0004568 - chitinase activity [Evidence IEA]; GO_function: GO:0008061 - chitin binding [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0006030 - chitin metabolic process [Evidence IEA]; GO_process: GO:0006032 - chitin catabolic process [Evidence IEA]" /codon_start=1 /product="Acidic mammalian chitinase" /protein_id="ELK05897.1" /db_xref="InterPro:IPR001223" /db_xref="InterPro:IPR002557" /db_xref="InterPro:IPR011583" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/Swiss-Prot:Q9BZP6" /translation="MGNDEVTTTDRMDDVTLYHTFSGLKNKKGLKSSQLKTLLAIGGW KLGAVPFTALASTPESRQTFIASVIKFLHQYEFDGLDFDQEYPGSHGSTPQDKHLFSV LVQEICEGFEQNAKQVDKPRLMVTTAVAAGISNIQSGYEIPPPVSVSDDLSYNSSVCH LYLDYIHVMTYDLHGSWEGYTGENSPFYKNPTDTGSTAHLHVVSPRIDADADQRPCRK SRGDLGTKPTKIPQMSHLYNICTFLKYGATEAWEASEDVPYAYRGNEGLGYDDTRSFK IKTGTGSSSSGGSSGGNGFWAGKASGLYPVANNRNAFWHCPNRLTYQQNCPAGLVFDT SCDCCNWA" assembly_gap 11282783..11284300 /estimated_length=1518 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11288292..>11288510 /locus_tag="PAL_GLEAN10017391" mRNA <11288292..>11288510 /locus_tag="PAL_GLEAN10017391" /product="hypothetical protein" CDS 11288292..11288510 /locus_tag="PAL_GLEAN10017391" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05898.1" /translation="MCFNKAGEEGCSRGVKSRERGGDWGGWERRNEEMQFAPLPGVCS GSQELVGPCSLLRLPTPHSPPTPSPRPF" gene <11288553..>11292973 /locus_tag="PAL_GLEAN10017392" mRNA join(<11288553..11288699,11289300..11289398, 11290154..11290281,11291721..11291838,11292905..>11292973) /locus_tag="PAL_GLEAN10017392" /product="hypothetical protein" CDS join(<11288553..11288699,11289300..11289398, 11290154..11290281,11291721..11291838,11292905..11292973) /locus_tag="PAL_GLEAN10017392" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05899.1" /db_xref="UniProtKB/Swiss-Prot:Q8TCI5" /translation="SESLLQYSFGTCQQRKLFPHFHPPNSLGNKFLPLRGEPHRGPGC YTAENNVYELAYNLSRIPTSRKGYAFGARTSVRFKPIKDMTPNPSTYQTVNPEQKHKQ NFAPFNTLLPRFRTYSKDTYFPGPGTYNPEIKPPPRITWPMKFGSPDWAQVPCLQKRT LKAELSTDKDFRKHRNRVAYLSLFYN" assembly_gap 11312554..11312595 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11321064..11321090 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<11333044..>11339202) /locus_tag="PAL_GLEAN10017393" mRNA complement(join(<11333044..11333203,11333811..11333879, 11334395..11334503,11335245..11335316,11335794..11335848, 11335987..11336057,11337205..11337254,11337542..11337683, 11338652..11338837,11339088..>11339202)) /locus_tag="PAL_GLEAN10017393" /product="Methylosome protein 50" CDS complement(join(11333044..11333203,11333811..11333879, 11334395..11334503,11335245..11335316,11335794..11335848, 11335987..11336057,11337205..11337254,11337542..11337683, 11338652..11338837,11339088..11339202)) /locus_tag="PAL_GLEAN10017393" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Methylosome protein 50" /protein_id="ELK05900.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="UniProtKB/Swiss-Prot:Q5E9I7" /translation="MRKETPPSLVPSAAREWNLPPNAPACMERQLEAARYRSDGALLL GASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGDRVILVASDSGA VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDFCIKVWDLAEQMVL NSYRAHSGPVTCVAASPHQDSVFLSCSEDSRILLWDTRCPKPASQMGCSASGYLPTSL AWHPQQSEVFVFGDENGTVSLVDTKSASCALSSAVHSQCVTGLVFSPHSVPFLASVSE DCSLAVLDSGLSEVFRSRAHRDFVRDATWSPLSPSLLTTVGWDHQVIHHIVPTEPLPA PGPNSVAE" assembly_gap 11334776..11334785 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11339561..>11351288 /locus_tag="PAL_GLEAN10017394" mRNA join(<11339561..11339600,11339875..11339911, 11344257..11344402,11346444..11346607,11347025..11347150, 11350025..11350204,11351211..>11351288) /locus_tag="PAL_GLEAN10017394" /product="ATP synthase subunit b, mitochondrial" CDS join(11339561..11339600,11339875..11339911, 11344257..11344402,11346444..11346607,11347025..11347150, 11350025..11350204,11351211..11351288) /locus_tag="PAL_GLEAN10017394" /note="GO_component: GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO_function: GO:0015078 - hydrogen ion transmembrane transporter activity [Evidence IEA]; GO_process: GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]" /codon_start=1 /product="ATP synthase subunit b, mitochondrial" /protein_id="ELK05901.1" /db_xref="InterPro:IPR008688" /db_xref="UniProtKB/Swiss-Prot:P13619" /translation="MLSRVVLSAAATAAPSLKNAALLGPGVLQATRIFHTGQPSLAPV PPLPEYGGKVRHGLIPEEFFQFLYPKTGVTGPYVLGTGLILYFLSKEIYVVTPETISA ISTIGLLVYVIKKYGASIGEFADKLNEQKIAQLEEVKQASIKYIQDAIDTEKSQQALV QKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKSRLDYHISVQNMMRRKEQEHMINW VEKHVVQSISAQQEKETIAKCIADLKLLAKKAQAQPVL" assembly_gap 11348148..11348197 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11371756..11371774 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11377832..11377858 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<11380817..>11381338) /locus_tag="PAL_GLEAN10017395" mRNA complement(<11380817..>11381338) /locus_tag="PAL_GLEAN10017395" /product="Adenosine A3 receptor" CDS complement(11380817..11381338) /locus_tag="PAL_GLEAN10017395" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0001609 - adenosine receptor activity, G-protein coupled [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Adenosine A3 receptor" /protein_id="ELK05902.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR001634" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q0VC81" /translation="MFGWNMKLTSGYPGNMTYLPCQFRSVIKMDYMVYFSFLTWIFIP LVVMCAIYIDIFCVIRNKLSQSLSNSKDTGAFYGREFKTAKSLFLVLFLFALSWLPLC IINCIIYFNGHVPTVVLKLGILLSHANSMMNPIVYAYKIKKFKETYVLILKACMICRP SDSLDPNIEQISE" gene complement(<11383109..>11383462) /locus_tag="PAL_GLEAN10017396" mRNA complement(<11383109..>11383462) /locus_tag="PAL_GLEAN10017396" /product="Adenosine A3 receptor" CDS complement(11383109..11383462) /locus_tag="PAL_GLEAN10017396" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Adenosine A3 receptor" /protein_id="ELK05903.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000466" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q0VC81" /translation="MFVNSTALLLTSITYISMEIVIGLCAIVGNVLVIWVVKLNPSLQ TTTFYFIVSLALADIAVGVLVIPLAIVVSLGITIHYYSCLLMACLLLIFTHASIMSLL AIAVDRYLRVKLTVR" assembly_gap 11386371..11386430 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11396121..11396231 /estimated_length=111 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11429324..11429755 /estimated_length=432 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11433380..>11433718 /locus_tag="PAL_GLEAN10017397" mRNA <11433380..>11433718 /locus_tag="PAL_GLEAN10017397" /product="Thioredoxin" CDS 11433380..11433718 /locus_tag="PAL_GLEAN10017397" /note="GO_process: GO:0045454 - cell redox homeostasis [Evidence IEA]" /codon_start=1 /product="Thioredoxin" /protein_id="ELK05904.1" /db_xref="InterPro:IPR012336" /db_xref="InterPro:IPR013766" /db_xref="UniProtKB/Swiss-Prot:P50413" /translation="MVKQVERKYAFQEALNSAGDKLTVVDFSATWRGSCKMRKPPFHP PSERYSNAVFLDVKADRVIVRMLLQSEVECMPTFRFFFFLSFFFLISFSITNLPVLKK GQKMDEFFWS" assembly_gap 11451621..11451639 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11465675..11466065 /estimated_length=391 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11468563..11469369 /estimated_length=807 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11484558..11484613 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11491546..11491573 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <11510269..>11523804 /locus_tag="PAL_GLEAN10017398" mRNA join(<11510269..11510325,11514119..11514187, 11516149..11516205,11517228..11517368,11518933..11519076, 11523718..>11523804) /locus_tag="PAL_GLEAN10017398" /product="Ras-related protein Rap-1A" CDS join(11510269..11510325,11514119..11514187, 11516149..11516205,11517228..11517368,11518933..11519076, 11523718..11523804) /locus_tag="PAL_GLEAN10017398" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0006913 - nucleocytoplasmic transport [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="Ras-related protein Rap-1A" /protein_id="ELK05905.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR002041" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR013753" /db_xref="InterPro:IPR020849" /db_xref="UniProtKB/Swiss-Prot:P62836" /translation="MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQV EVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILR VKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYD LVRQINRKTPVEKKKPKKKSCLLL" gene complement(<11539232..>11540074) /locus_tag="PAL_GLEAN10017399" mRNA complement(<11539232..>11540074) /locus_tag="PAL_GLEAN10017399" /product="hypothetical protein" CDS complement(11539232..11540074) /locus_tag="PAL_GLEAN10017399" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05906.1" /db_xref="UniProtKB/Swiss-Prot:A6QP24" /translation="MSMKEVGDGLQDQMNCMMGALQELKLLQVQTALEQLEISGGGPA PGCSASPRTQPPPPQWEGGGGPARPAARPTSSQPSVGSSAKPPAHRGVCGRDPASRPR TQPPEHPSQALQGPELVEPDDWTSTLMSRGRNRQPLVLGDNVFADLVGNWLDLPELEK GGERGETGEGGEPSAERGQPWELGRRFALTANIFRKLLRSVRPDRDRLLKEKPGWATP TASEPRAGRSQKVKKRGHSKGSGRFPSPGCPGPRPGEGPSTSRPRARGASPSGFDINT AVWV" gene <11564443..>11572182 /locus_tag="PAL_GLEAN10017400" mRNA join(<11564443..11564743,11565135..11565229, 11567080..11567248,11567831..11567945,11568068..11568210, 11568321..11568459,11568557..11568615,11569244..11569326, 11569692..11569797,11569908..11570009,11571023..>11572182) /locus_tag="PAL_GLEAN10017400" /product="Putative ATP-dependent RNA helicase DDX20" CDS join(11564443..11564743,11565135..11565229, 11567080..11567248,11567831..11567945,11568068..11568210, 11568321..11568459,11568557..11568615,11569244..11569326, 11569692..11569797,11569908..11570009,11571023..11572182) /locus_tag="PAL_GLEAN10017400" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]" /codon_start=1 /product="Putative ATP-dependent RNA helicase DDX20" /protein_id="ELK05907.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" /db_xref="UniProtKB/Swiss-Prot:Q9UHI6" /translation="MAAEFEAPAALGTVETATPLEHVAAQVSAPEPTPGPARSLRTAH DVSGPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDL IVQAKSGTGKTCVFSTIALDSLILENLSTQILILAPTREIAVQIHSVITAIGIKMEGL ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLE EGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTRYMRDPTFVRLNSSDPSLIGL KQYYKVVSSYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGF PAECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWET YMHRIGRAGRFGTLGLTVTYCCRGEEENMMIKIAQKCNVNLLPLPDPIPPGLMEECSD WDVEGRAAVHTHGLVSIPAKPLKKQIQKIERPSQSQKAHGNHLASSRNTSVSALSVKS KSNTKQKLPVKSHSECGIVEKAVSPKALGCAPQLEEQTKTSVQTPVENSNNSQHQGKE ELPVSLPKIPCLSSFKIHLPCTLTLAELVEDYEHYVKEGLEKPVEIIRHYTGPGGQTV HPQNGFVRDRITEERAQVLASSSQSGDSESDSDSYSSRTSSQSKGNKSYVEGSSDTQL KDSESTPVDGHTPLEPPLNGNDTPNVEYRESPDIQVKTRHKEGANQRAKQSRRTLPRR SSYRWQTEPQEDGWYDHHRETHLSFPGTYQDYEEYWRAYYRAWQEYYTAASQSYYWNA QRHPSWMVAYHMNTIYLQEMMRGNQ" assembly_gap 11578241..11578316 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<11580709..>11597411) /locus_tag="PAL_GLEAN10017401" mRNA complement(join(<11580709..11580910,11581647..11581894, 11584686..11584775,11585138..11585239,11591230..11591392, 11597311..>11597411)) /locus_tag="PAL_GLEAN10017401" /product="Potassium voltage-gated channel subfamily D member 3" CDS complement(join(11580709..11580910,11581647..11581894, 11584686..11584775,11585138..11585239,11591230..11591392, 11597311..11597411)) /locus_tag="PAL_GLEAN10017401" /note="GO_component: GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_process: GO:0006813 - potassium ion transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily D member 3" /protein_id="ELK05908.1" /db_xref="InterPro:IPR004056" /db_xref="UniProtKB/Swiss-Prot:Q9UK17" /translation="MAEGVLGERGAQRASESLRPTWSGAGCCLHVGPRYGDMVPKTIA GKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRVAKTGS SNAYLHSKRNGLLNEALELMGTPEEGHMGKATSLIESQHHHLLHCLEKTTNHEFVDEQ MFEQNCMESSMQNYPSTRSPSLSSHPGLTTTCCSRRSKKTTHLPNSNLPATRLRSMQE LSTIHIQGSEQPSLTTSRSSLNLKADDGLRPNCKASQITTAIISIPTPPALTPEGESR PPPASPGPNTNIPSIASNVVKVSAL" assembly_gap 11583262..11583320 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11598301..11598317 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11610063..11611699 /estimated_length=1637 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11627682..11628396 /estimated_length=715 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11630105..11631412 /estimated_length=1308 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11638501..11638521 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11682971..11683997 /estimated_length=1027 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11697219..11697253 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11701340..11701378 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11725751..11726865 /estimated_length=1115 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11734347..11735499 /estimated_length=1153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11768685..11768755 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11774595..11775108 /estimated_length=514 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11780386..11780437 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11864154..11864183 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11869749..11869836 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11877185..11877263 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11907009..11907018 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11912486..11912603 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11974382..11974426 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11988698..11988740 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12000868..12003024 /estimated_length=2157 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12009308..12009812 /estimated_length=505 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12013154..12013163 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12014764..12014792 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12020623..12020660 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12050494..12050636 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12061216..12061251 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12064887..12065173 /estimated_length=287 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12065751..12065780 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12086945..>12113920 /locus_tag="PAL_GLEAN10017403" mRNA join(<12086945..12087043,12107647..12107877, 12111273..12111380,12112439..12113168,12113295..>12113920) /locus_tag="PAL_GLEAN10017403" /product="CTTNBP2 N-terminal-like protein" CDS join(12086945..12087043,12107647..12107877, 12111273..12111380,12112439..12113168,12113295..12113920) /locus_tag="PAL_GLEAN10017403" /codon_start=1 /product="CTTNBP2 N-terminal-like protein" /protein_id="ELK05909.1" /db_xref="InterPro:IPR019131" /db_xref="UniProtKB/Swiss-Prot:Q5RDH2" /translation="MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEER YGKYNISDPLMALQRDFETLKEKNDGEKQPVCTNPLSVLKVVMRQCKNMQERMLSQLA AAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKE QKKLSSQLEEERSRHKQLSSMLVLECKKATSKAAEEGQKAGELSLKLEKEKSRASKLE EELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTRTLKEEMESLKKIVRD LEASHQRGGPHEQPKKPVTTSKGTVTEHPVRVSVFCQTESFQAERTQGSNVAKVTTSG LPGPTTPPYSYAKTNGHFDPEMQTTKELITGSSVENQVPPREKPVGLAQEKAVENVLT KRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLI DNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLASTANPRGDSSHSP TPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSPSTSTPLTKTHSQASS LTAADDLASSCSANAVVANGKDVEILLPTSS" assembly_gap 12134719..12134847 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12135196..>12146837 /locus_tag="PAL_GLEAN10017404" mRNA join(<12135196..12135383,12141152..12141372, 12142369..12142646,12143335..12143599,12146608..>12146837) /locus_tag="PAL_GLEAN10017404" /product="Protein Wnt-2b" CDS join(12135196..12135383,12141152..12141372, 12142369..12142646,12143335..12143599,12146608..12146837) /locus_tag="PAL_GLEAN10017404" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_process: GO:0007223 - Wnt receptor signaling pathway, calcium modulating pathway [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]" /codon_start=1 /product="Protein Wnt-2b" /protein_id="ELK05910.1" /db_xref="InterPro:IPR005816" /db_xref="InterPro:IPR005817" /db_xref="InterPro:IPR009140" /db_xref="UniProtKB/Swiss-Prot:Q93097" /translation="MLRPGGAEEAAQLSPRRPRAPVPAPGPAAADGSRASARLSLACL PLLLLLLLTLPARVDSSWWYIGALGARVICDNIPGLVSRQRQLCQRYPDIMRSVGEGA REWIRECQHQFRHHRWNCTTVDRDHTVFGRVMLRSSREAAFVYAISSAGVVHAITRAC SQGELSVCSCDPYTRGRHHDQRGDFDWGGCSDNIHYGVRFAKAFVDAKEKRLKDARAL MNLHNNRCGRTAVRRFLKLECKCHGVSGSCTLRTCWRALSDFRRTGDYLRRRYDGAVQ VTATQDGANFTAARQGYRRATRTDLVYFDNSPDYCVLDKAAGSLGTAGRVCSKTSKGT DGCEIMCCGRGYDTTRVTRVTQCECKFHWCCAVRCKECRNTVDIHTCKAPKKAEWLDQ T" assembly_gap 12137403..12137448 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12143611..12143650 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12164087..>12224754) /locus_tag="PAL_GLEAN10017405" mRNA complement(join(<12164087..12164265,12169319..12169411, 12173089..12173239,12189666..12189768,12190670..12190742, 12195688..12195802,12196045..12196142,12197537..12197691, 12205540..12205618,12210672..12210787,12213740..12213794, 12218391..12218553,12222729..12222811, 12224550..>12224754)) /locus_tag="PAL_GLEAN10017405" /product="Suppressor of tumorigenicity protein 7-like protein" CDS complement(join(12164087..12164265,12169319..12169411, 12173089..12173239,12189666..12189768,12190670..12190742, 12195688..12195802,12196045..12196142,12197537..12197691, 12205540..12205618,12210672..12210787,12213740..12213794, 12218391..12218553,12222729..12222811,12224550..12224754)) /locus_tag="PAL_GLEAN10017405" /codon_start=1 /product="Suppressor of tumorigenicity protein 7-like protein" /protein_id="ELK05911.1" /db_xref="InterPro:IPR007311" /db_xref="UniProtKB/Swiss-Prot:A3KN28" /translation="MADGDGLSEAATAAASPAPASGLSPPLGWRERLRAGLAGTGASL WFVAGLGLLYALRVPLRLCENLAAVTLFLNSLTPKFYVALTGTSSLISGLIFIFEWWY FHKHGTSFIEQVSVSHLRPLMGGTESSISEPGSPSSNRESETSRQNLSECKVWRNPLN LFRGAEYRRYTWVTGKEPLTYYDMNLSAQDHQTFFTCDTDFLRPSDTVMQKAWRERNP PARIKAAYQALELNNDCATAYVLLAEEEATTIVDAERLFKQALKAGETIYRRSQQCQH QSPQHEAQLRRDTNVLVYIKRRLAMCARKLGRIREAVKIMRDLMKEFPPLTMLNIHEN LLESLLELQAYADVQAVLAKYDDISLPKSAAICYTAALLKTRTVSDKFSPETASRRGL NTAEINAVEAIHRAVEFNPHVPKYLLEMKSLILPPEHILKRGDSEAIAYAFFHLQHWK RIEGALNLLQCTWEGTFRMIPYPLEKGHLFYPYPSCTETADRELLPTFHHVSVYPKKE LPFFIHFTAGLCSSTAMIALLTHQFPEIMGVFAKAVSMISRTCVEYL" assembly_gap 12184116..12184127 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12203393..12203548 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12225478..>12254227 /locus_tag="PAL_GLEAN10017406" mRNA join(<12225478..12225516,12235647..12235710, 12237537..12237588,12240324..12240387,12244126..12244332, 12247501..12247580,12248174..12248252,12252115..12252186, 12253645..12253707,12254087..>12254227) /locus_tag="PAL_GLEAN10017406" /product="F-actin-capping protein subunit alpha-1" CDS join(12225478..12225516,12235647..12235710, 12237537..12237588,12240324..12240387,12244126..12244332, 12247501..12247580,12248174..12248252,12252115..12252186, 12253645..12253707,12254087..12254227) /locus_tag="PAL_GLEAN10017406" /note="GO_component: GO:0008290 - F-actin capping protein complex [Evidence IEA]; GO_function: GO:0003779 - actin binding [Evidence IEA]; GO_process: GO:0030036 - actin cytoskeleton organization [Evidence IEA]" /codon_start=1 /product="F-actin-capping protein subunit alpha-1" /protein_id="ELK05912.1" /db_xref="InterPro:IPR002189" /db_xref="UniProtKB/Swiss-Prot:A4FUA8" /translation="MADFEDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDN LLREGAAHAFAQYNMDQFTPVKIEGYEDQVLITEHGDLGNSRFLDPRNKISFKFDHLR KEASDPQPEDVDGGLKSWRESCDSALRAYVKDHYSNGFCTVYAKTIDGQQTIIACIES HQFQPKNFWNGRWRSEWKFTITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTV SNEVQTAKEFIKIIEHAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS YKIGKEMQNA" assembly_gap 12226141..12226176 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12259498..>12281050 /locus_tag="PAL_GLEAN10017407" mRNA join(<12259498..12259634,12271435..12271641, 12271901..12272136,12272335..12272593,12273560..12273691, 12274339..12274507,12275271..12275425,12275715..12275861, 12276000..12276147,12276582..12276740,12277001..12277104, 12277239..12277336,12277440..12277656,12278501..12278618, 12278813..12279004,12279234..12279308,12280170..12280295, 12280376..12280464,12280754..12280875,12280959..>12281050) /locus_tag="PAL_GLEAN10017407" /product="Putative helicase MOV-10" CDS join(12259498..12259634,12271435..12271641, 12271901..12272136,12272335..12272593,12273560..12273691, 12274339..12274507,12275271..12275425,12275715..12275861, 12276000..12276147,12276582..12276740,12277001..12277104, 12277239..12277336,12277440..12277656,12278501..12278618, 12278813..12279004,12279234..12279308,12280170..12280295, 12280376..12280464,12280754..12280875,12280959..12281050) /locus_tag="PAL_GLEAN10017407" /codon_start=1 /product="Putative helicase MOV-10" /protein_id="ELK05913.1" /db_xref="UniProtKB/Swiss-Prot:Q9HCE1" /translation="MPRKFSCRQLRETGQRFENFLVEKGLDTETDREKLRTLYNQDFK ISSSGTPNPGFSSMLYGMKIANLAFVTKTQVRFFKLDCWADVSLPEKRKMRLGSDIST HHKSLLAKIYHDRAEYLHGKHGVDVEVQGPHEARDGQLLIRLDLNRKEVLTLRLRNGG TETVTLTHLFPLCRTPQFAFYDEKQELPCPLGPGESYDLHVHCRTTFVGYFPATVLWE LLGPGEPSSEETGTFYITRFLAAVAHSPLAAQLKPTKPYKRIPITGKPVVTTRIEEGE RPDCTKGYDLELSMKLEMYNPPPSLRQLLPKLQGTSVFTAPKDIAKIKAQLETALKSR NYEVKFRLLLHLEELQMEHDIRHYDLESVPMTWDPKDQNPRLLTLEVPGVAESRPSVL RGDHLFALLSSETHQNDAVTYKGFVHRVELDRVKLSFSPSLLSRFVDGLTFKVNFTFN RQPLRVQHRALELAGRWQLWPXXXXXXXXXRLYDRNLESNPEQLQAMKHIVTGTTRPA PYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLQVHLPRCIY RLLAPSRDIRMVPEDIKPCCNWDPNKGEYVFPAKKKLQEYRVLITTLITASRLVSAQF PIDHFTHIFIDEAGHCMEPESLVAIAGLLEVKETDNPGGQLVLAGDPRQLGPVLRSPL AQKHGLGYSMLERLLTYNTLYKKGPNGYNPQYITKLLRNYRSHPNILDIPNRLYYEGE LQACADVLDRERFCHWEDLPRKGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLK LLLTSSSKKGRARLSPRNVGVISPYRKQVEKIRYCITKLDKELRGLNDIKDLKVGSVE EFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNPLL LGHDPDWKTFLDFCKENGGYTGCPFPAKLDLQQGQNLLQGLSKLSSSTSGPRSRDYLP QERGREGGLHLQVEPEWRNEL" assembly_gap 12259699..12259965 /estimated_length=267 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12264354..12264381 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12267102..12267158 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12275834..12275858 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12282029..>12284293) /locus_tag="PAL_GLEAN10017408" mRNA complement(join(<12282029..12282202,12283040..12283170, 12283501..12283621,12284138..>12284293)) /locus_tag="PAL_GLEAN10017408" /product="Rho-related GTP-binding protein RhoC" CDS complement(join(12282029..12282202,12283040..12283170, 12283501..12283621,12284138..12284293)) /locus_tag="PAL_GLEAN10017408" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="Rho-related GTP-binding protein RhoC" /protein_id="ELK05914.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR013753" /db_xref="UniProtKB/Swiss-Prot:Q5RCK9" /translation="MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIA DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE VKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECS AKTKDGVREVFEMATRAGLQVRKNKRRRGCPIL" assembly_gap 12287186..12287635 /estimated_length=450 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12290564..>12295759) /locus_tag="PAL_GLEAN10017409" mRNA complement(join(<12290564..12290843,12290968..12291119, 12291233..12291340,12291495..12291558,12291761..12291879, 12292407..12292491,12292776..12292888,12293162..12293449, 12293987..12294101,12295434..>12295759)) /locus_tag="PAL_GLEAN10017409" /product="Protein phosphatase 1J" CDS complement(join(12290564..12290843,12290968..12291119, 12291233..12291340,12291495..12291558,12291761..12291879, 12292407..12292491,12292776..12292888,12293162..12293449, 12293987..12294101,12295434..12295759)) /locus_tag="PAL_GLEAN10017409" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]" /codon_start=1 /product="Protein phosphatase 1J" /protein_id="ELK05915.1" /db_xref="InterPro:IPR001932" /db_xref="InterPro:IPR014045" /db_xref="UniProtKB/Swiss-Prot:Q5JR12" /translation="MLNRVRSAVAHLVSSGGAPPPRSKSPDLPNTTSALPAAPPEAPR SPPARAGSGSAVPVKTAEARASFSRPTFLQLSPGGLRRADDHTGRAVQSPPDTGRRLP WSTGYAEVINAGKSRHNEDQACCEVVYVEGRRSVSGVPREPSRGQGLCFYYWGLFDGH AGGGAAEMASRLLHRHIREQLKDLVEILQDPSPPPVCLPSTPGAPAPLDSSHLVGPQS CWSSQKEVTHESMVVGAIENAFQLMDEQMARERRGHQVEGGCCALVVVYLLGKIYVAN AGDSRAIIVRNGEIIPMSREFTPETERQRLQLLGFLKPELLGGEFTHLEFPRRVQSKE LGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDHNLKVCS STLPIKPFLSCFPEVQVYDLTQYEHCPDDVLVLGTDGLWDVTSDCEVAATVDRVLSAY EPNDCSRYTALAQALVLGARGTPRDRGWRLPNNKLGSGDDISVFIIPLGGPGSYSRGS XXXXXXXXXXXXXXXXXXXXXXSPTPAIPASPHLPLSQPKV" assembly_gap 12290626..12290688 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12299235..12299357 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12301656..12302020 /estimated_length=365 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12302657..>12305192 /locus_tag="PAL_GLEAN10017410" mRNA join(<12302657..12302849,12303673..12303849, 12304879..>12305192) /locus_tag="PAL_GLEAN10017410" /product="Protein FAM19A3" CDS join(12302657..12302849,12303673..12303849, 12304879..12305192) /locus_tag="PAL_GLEAN10017410" /codon_start=1 /product="Protein FAM19A3" /protein_id="ELK05916.1" /db_xref="InterPro:IPR020350" /db_xref="UniProtKB/Swiss-Prot:Q7Z5A8" /translation="MALGRAPDLVRASAVPVKQGTCEVTASHRCCNRNRIEERSQTVK CSCFTGQVAGTTRAKPSCVDASIVLQKWWCQMEPCLPGEECKVLPDLSGWSCSSGHKV KTTKVSRGGHFVLHYRSPLPWGDTIAFGSQPGRDSLTEPRTEAWYPVITQQEWRFTHL DTRPVPSAVSLLLGALQLSCSAGMRRSRHIPSAVLGSPGGQGRRSGYNSCPQGMSSQV GELTKGNLD" assembly_gap 12309956..12309965 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12325321..12325335 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12336342..12336444 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12346674..12346691 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12368075..12368555 /estimated_length=481 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12380696..12380716 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12391979..12392002 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12413197..>12422373) /locus_tag="PAL_GLEAN10017412" mRNA complement(join(<12413197..12413471,12415217..12416086, 12419355..12419498,12422157..>12422373)) /locus_tag="PAL_GLEAN10017412" /product="Monocarboxylate transporter 1" CDS complement(join(12413197..12413471,12415217..12416086, 12419355..12419498,12422157..12422373)) /locus_tag="PAL_GLEAN10017412" /note="GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Monocarboxylate transporter 1" /protein_id="ELK05917.1" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="UniProtKB/Swiss-Prot:Q3MHW6" /translation="MPPAVGGPVGYTPPDGGWGWAVVVGAFISIGFSYAFPKSITVFF KEIEGIFHATTSEVSWISSIMLAVMYGGGPISSVLVNKYGSRPVMIVGGCLSGCGLIA ASFCNSVKELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLST LAPLNQVFFDMFGWRGSFLILGGFLLNCCVAGSLMRPIGPKPTSAEKYKSKETLQEAG KSSAKDVALGDANTDLIGGNPKEEKQSFFQRINKFLDFSLFTHRGFLLYLSGNVIMFF GLFTPLVFLSNYGKSQHYSSERAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFF AASVIANGVCHLLAPLSSSYIEFCIYAGFFGFAFGWLSSVLFETLMDLVGPLKFSSAV GLVTIVECCPVLLGPPVLGRLNDIYGDYKYTYWACGGILIVAGIFLFIGMGINYRLVA KEQEAERQQKKESKEEETNVDVEKPKEVTNTSESPEQKSTEGSPKEEESPV" assembly_gap 12442452..12442494 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12443913..12444092 /estimated_length=180 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12450782..12450813 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12485062..12485073 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12499079..12499625 /estimated_length=547 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12502320..12502363 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12506752..12506840 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12513278..12513300 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12516160..>12556739 /locus_tag="PAL_GLEAN10017414" mRNA join(<12516160..12516395,12528599..12528740, 12529109..12529246,12529407..12529665,12533845..12533920, 12535727..12535792,12537292..12537366,12537520..12537654, 12538205..12538348,12538474..12538617,12539189..12539332, 12539538..12539681,12541913..12541993,12542711..12542782, 12542921..12542989,12546975..12547138,12548753..12549073, 12550026..12550307,12551467..12551916,12552548..12552697, 12554312..12554602,12556513..>12556739) /locus_tag="PAL_GLEAN10017414" /product="Leucine-rich repeat and immunoglobulin-like domains protein 2" CDS join(12516160..12516395,12528599..12528740, 12529109..12529246,12529407..12529665,12533845..12533920, 12535727..12535792,12537292..12537366,12537520..12537654, 12538205..12538348,12538474..12538617,12539189..12539332, 12539538..12539681,12541913..12541993,12542711..12542782, 12542921..12542989,12546975..12547138,12548753..12549073, 12550026..12550307,12551467..12551916,12552548..12552697, 12554312..12554602,12556513..12556739) /locus_tag="PAL_GLEAN10017414" /note="GO_component: GO:0043234 - protein complex [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0051258 - protein polymerization [Evidence IEA]" /codon_start=1 /product="Leucine-rich repeat and immunoglobulin-like domains protein 2" /protein_id="ELK05918.1" /db_xref="InterPro:IPR000483" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:O94898" /translation="MAPAPRGVREEPLLECRSGPLSRLLFLAQAFLLLPAARAGLCPA PCSCHIPLLDCSHRKLPALSWRALSSPLPPDATSLSPPPASQQLITGKKDTTSNCAHG HSTIGKEITGLVLDQIRELADQCQTNPVPCARIYFPLATCARLISAEKAYHEQLSEVE VTSACFEPANQMQPPTVVPGGDLATVQRAVCVLSNNTSVAQAWARLDHKFDLTCAKCA FVHWHMGESMEEGEFSEACEGMADLGKDYEEVGMDFVGGEADDLVITDIHERSIVEEN SQVILPGRDLSHNRLSNWNISLESQTLQEVKLNYNELTEIPYFGEPTSNITLLSLVHN IIPDINAEAFQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITILEAGCFD NLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNKIKVVEGLTFQGLDSLRSLKM QRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAVERISP DAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQ TLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNRIKSITKKAFIGLESLEHLDLNNN AIMSIQENAFSQTRLKELILNTNSLLCDCHLKWLLQWLVDKNFEHAVNVSCAHPEWLA GQSILNVDLKDFVCDDFLKPQIRMHPETTVALRGSNVTLTSTAVSSSDSPMSAVWRKD SEILYDADIENFVRYQHQAGEALEYTSVLHLFSVNFTDEGKYQCIVTNHFGSNYSHKA KLTVNEMPSFLKTPMDLTIRTGAMARLECAAEGHPAPQISWQKDGGTDFPAARERRMH VMPEDDVFFIANVKIEDMGIYSCMAQNIAGGLSANASLTVLETPSFIRPLEDKTVTRG ETAVLQCIAGGSPAPRLNWTKDDGPLLVTERHFFAAANQLLIIVDAGLEDAGKYTCIM SNTLGTERGHIYLHVISSPNCDSSQSSIGHEDDGWTTVGIVIIVVVCCVVGTSLIWVI VIYHMRRKNEDYSITNTEELNLPADIPSYLSSQGTLSEPQEGYSNSEAGSHQQLMPPA SGYLHRGTDGGTGTRVICSDCYDNANIYSRTREYCPYTYIAEEDVLDQTLSSLMVQMP KETYMAHPSQDAPTLESLILSTDKDMSAFPTNHERMSEKKLSSTQTSTETLQRPLWNT SKELGLTHPPFSQQPVLESPRLHQNKSLAESGPDPATSPMACRKLPDHAFDFSRTRNI QDGSEGT" assembly_gap 12548510..12548539 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12565445..12565467 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12568372..12568388 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12592264..12592297 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12597850..12597868 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12627946..12628001 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12643298..12643312 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12658825..12658875 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12661919..12662009 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12681934..12681958 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12697148..12697188 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12706628..12706985 /estimated_length=358 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12738487..12738528 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12738870..12738929 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12739019..>12739438 /locus_tag="PAL_GLEAN10017415" mRNA <12739019..>12739438 /locus_tag="PAL_GLEAN10017415" /product="Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" CDS 12739019..12739438 /locus_tag="PAL_GLEAN10017415" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" /protein_id="ELK05919.1" /db_xref="InterPro:IPR001478" /db_xref="UniProtKB/Swiss-Prot:Q5TCQ9" /translation="MSKTLKKKKHWLSKVQECAVSWAGPPGDVGAEIRGGAERGEFPY LGRLREEPGGGTCCIVSGKAPSPGDVLLEVNGTPVSGLTNRDTLAVIRHFREPIRLKT VKPGTPALPFCRGDCGEVRLGILGAAASPHCQSWGES" assembly_gap 12751159..12751172 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12772693..12772712 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12787068..12787094 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12813111..12813133 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12829923..>12887569 /locus_tag="PAL_GLEAN10017416" mRNA join(<12829923..12829986,12838839..12838955, 12850242..12850361,12855544..12855753,12859203..12859377, 12862792..12862871,12873368..12873425,12877468..12877562, 12882629..12882817,12884476..12885081,12887454..>12887569) /locus_tag="PAL_GLEAN10017416" /product="Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" CDS join(12829923..12829986,12838839..12838955, 12850242..12850361,12855544..12855753,12859203..12859377, 12862792..12862871,12873368..12873425,12877468..12877562, 12882629..12882817,12884476..12885081,12887454..12887569) /locus_tag="PAL_GLEAN10017416" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" /protein_id="ELK05920.1" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR008144" /db_xref="InterPro:IPR008145" /db_xref="UniProtKB/Swiss-Prot:Q9EQJ9" /translation="MNSPAWCRGSCPLLSYSDVSGGKVINKDLRHYLSLQFQKGSVDH KLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFISVEQFKALEESGALLESGTYDGN FYGTPKPPAEPSPFQPDPVDQVLFDNEFDTESQRKRTTSVSKMERMDSSLPEEEDDED KEAINGTGSAENRERPSESSDWMKTIPSYNQTNSSMDFRNYMMRDENLEPLPQNWEMA YTDTGMVYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDH LNQKTQFENPVEEAKRKKQLGQADTGSSKPDMEKSHFTRDPSQLKGVLVRASLKKSAM GFGFTIIGGDRPDEFLQVKHVLKDGPAAQDGKIAPGDVIVDINGSCVLGHTHADVVQM FQLVPVNQYVNLTLCRGYPLPDDSEDPAVDILAVTPVINGQPLSKGEAGVNTQDFKSG AAILDQNGKPGHMLVSDRLSGPSDPSEQRASMASSGNSQPELVTVPLIKGPKGFGFAI ADSPTGQKVKMILDSQWCPGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPL LILRGVIAFDSCPHIYFIMDARAATVTLTVYKLMDVSDDLSLL" gene <12887737..>12914485 /locus_tag="PAL_GLEAN10017417" mRNA join(<12887737..12887999,12888601..12888677, 12890879..12890970,12892937..12893129,12895120..12895308, 12901973..12902158,12909209..12909311,12910035..12910161, 12910702..12910845,12913554..12913692,12914436..>12914485) /locus_tag="PAL_GLEAN10017417" /product="Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" CDS join(12887737..12887999,12888601..12888677, 12890879..12890970,12892937..12893129,12895120..12895308, 12901973..12902158,12909209..12909311,12910035..12910161, 12910702..12910845,12913554..12913692,12914436..12914485) /locus_tag="PAL_GLEAN10017417" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" /protein_id="ELK05921.1" /db_xref="InterPro:IPR001478" /db_xref="UniProtKB/Swiss-Prot:Q5TCQ9" /translation="MNICNPPPLTHSNSGQQAVLKTDRLSGPSDPSEQSASMASSGNS QLFSRKSRYIREGILLACSGRVLSEWENMKICHSIFPYQIAQQCVIRSGSPKLDPSEV YLKSKTLYEDKPPNTKDLDVFLRKQESGFGFRVLGGDGPDQSIYIGAIIPLGAAEKDG RLRAADELMCIDGIPVKGKSHKQVLDLMTTAARNGHVLLTVRRKIFHGEKQPEDDSPQ AFLSAQNGSPRLSRAEVPARPAPQEAYDVVLQRKESEGFGFVILTSKNKPPPGVIPHK IGRVIEGSPADRCGKLKVGDQISAVNGQSIVGLSHDSIVQLIKDAGVTVTLTVIAEEE HHGPPSGTNSARQSPALQHRPMGQSQANHIPGDRSALEGEIGKDISASYRHSWSDHKH LAQPDTATISIVGSRHSQGLGCCAVELERGPRGFGFSLRGGKEYSMGLFILRLAEDGP ALKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHGLAP SGLCSYVKPEQH" assembly_gap 12897690..12899102 /estimated_length=1413 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12921114..12921286 /estimated_length=173 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12927658..>12946680) /locus_tag="PAL_GLEAN10017418" mRNA complement(join(<12927658..12927795,12928220..12928315, 12929277..12929432,12931577..12931663,12934635..12934907, 12935311..12935439,12938086..12938307,12939292..12939381, 12939492..12939665,12940529..12940688,12942040..12942174, 12943428..12943584,12946045..12946203, 12946635..>12946680)) /locus_tag="PAL_GLEAN10017418" /product="Putative homeodomain transcription factor 1" CDS complement(join(12927658..12927795,12928220..12928315, 12929277..12929432,12931577..12931663,12934635..12934907, 12935311..12935439,12938086..12938307,12939292..12939381, 12939492..12939665,12940529..12940688,12942040..12942174, 12943428..12943584,12946045..12946203,12946635..12946680)) /locus_tag="PAL_GLEAN10017418" /codon_start=1 /product="Putative homeodomain transcription factor 1" /protein_id="ELK05922.1" /db_xref="InterPro:IPR021980" /db_xref="UniProtKB/Swiss-Prot:Q9UMS5" /translation="MGHIKPDLIDVDLIRGSTFAKAKPEIPWTSLTRKGLVRVVFFPL FSSWWIQVTSLRIFVWLLLLYLMQVIALVLYYMMPIVNVSEVLGPLCLMLLMGTVHCQ IVSAQITRPSGSNGNRRRRKLRKPVNGDGSRENGNNSSDKVRVVETVEPAPTGGSFWG TLFGNRIKRVKLISNKGTEPDLDSSCLHPIIKKKQCRPEIKLWQMTEKAKFSDGEKCR REAFRRVGNGMSDDLSSEEDGDARTQMMILRRSVEGASSDNGCEVKNRKSILSRHINS QVKKTTTKWCHIVRDSDSLAESEFESAAFIQGSRSGINGGSRSLNMSRRDSESTRHDS ETEDMLWDDLLHGPECRSSVTSDSEGGHVNTLHSGTKRDPKEDVFQQNHLFWLQNSSP ASDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVITIGLAFFPF IYRLFREKSFDQLKSISAEEILTFFCGAPPVTPVIILSMINFFERLCLTWIFFFMMCV AERTYKQRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWET ALLLFLLRLASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLST KLLKELDTPFRLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRVSI" assembly_gap 12971840..12971892 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12972168..12972191 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12978251..>13013701) /locus_tag="PAL_GLEAN10017419" mRNA complement(join(<12978251..12978724,12979327..12979435, 12980736..12980903,12986828..12986970,12987267..12987404, 13002727..13003400,13013140..>13013701)) /locus_tag="PAL_GLEAN10017419" /product="Round spermatid basic protein 1" CDS complement(join(12978251..12978724,12979327..12979435, 12980736..12980903,12986828..12986970,12987267..12987404, 13002727..13003400,13013140..13013701)) /locus_tag="PAL_GLEAN10017419" /codon_start=1 /product="Round spermatid basic protein 1" /protein_id="ELK05923.1" /db_xref="UniProtKB/Swiss-Prot:Q5VWQ0" /translation="MAAQVGAVRVVRAVAAQEEPDKEGKEKPHAGVSPRGVKRQRRAS SGGAQEKRGRPSQDPPLAPPHRRRRSRQHPGPLPPTIAAPTIPGPVEPLLLPPPPPPS LAPAGPPVAAPLPAPGTSALFTFSPLTVSAAGPKHKGHKERHKHHHHRVSDGDPGACV PGDLKHKDKQENGERTGGVPLMKAPKRETPDENGKTQRADDFVLKKIKKKKKKKHRED MRGRRLKMYNKEVQTVCAGLTRISKEILTQGQVNSTSGVNKESFRYLKDEQLCRLNLG MQEYRVPQGVQTPFMTHQEHSIRRNFLKTGTKFSNFIHEEHQSNGGALVLHAYMDELS FLSPMEMERFSEEFLALTFSENEKNAAYYALAIVHGAAAYLPDFLDYFAFNFPNTPVK MEILGKKDIETTTISNFHTQVNRTYCCGTYRAGPMRQISLVGAVDEEVGDYFPEFLDM LEESPFLKMTLPWGTLSSLRLQCRSQSDDGPIMWVRPGEQMIPTADMPKSPFKRRRSM NEIKNLQYLPRTSEPREVLFEDRTRAHADHVGQGFDWQSTAAVGVLKAVQFGEWSDQP RITKDVICFHAEDFADVVQRLQLDLHEPPVSQCVQWVDEAKLNQMRREGIRYARIQLC DNDIYFIPRNVIHQFKTVSAVCSLAWHIRLKQYHPVVEATQNVESSSAMDGDLTGKRE LEVDSQCVRVKTDPEETCTEIQLLTTASSSFPPSSELNLQQDQMTQPIPVLKVESRLD SDQQHNLQEHSNTPV" gene complement(<13019885..>13066562) /locus_tag="PAL_GLEAN10017421" mRNA complement(join(<13019885..13019991,13023788..13023818, 13024299..13024414,13024663..13024743,13027295..13027322, 13028456..13028586,13028746..13028829,13030378..13031284, 13039403..13039480,13041597..13041656,13042955..13042993, 13043429..13043524,13043684..13043760,13044029..13044137, 13063200..13063418,13066009..13066130, 13066436..>13066562)) /locus_tag="PAL_GLEAN10017421" /product="Tyrosine-protein phosphatase non-receptor type 22" CDS complement(join(13019885..13019991,13023788..13023818, 13024299..13024414,13024663..13024743,13027295..13027322, 13028456..13028586,13028746..13028829,13030378..13031284, 13039403..13039480,13041597..13041656,13042955..13042993, 13043429..13043524,13043684..13043760,13044029..13044137, 13063200..13063418,13066009..13066130,13066436..13066562)) /locus_tag="PAL_GLEAN10017421" /note="GO_function: GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO_process: GO:0006470 - protein dephosphorylation [Evidence IEA]" /codon_start=1 /product="Tyrosine-protein phosphatase non-receptor type 22" /protein_id="ELK05924.1" /db_xref="InterPro:IPR000242" /db_xref="UniProtKB/Swiss-Prot:Q9Y2R2" /translation="MKNPRTFEEQTECIVEFLLTDFLGTSVMVANRELHSVDEPDSGE DSSFDVAIIAGRLRMLADEVNEELEASVKNIIAKSIWGKAGAVLQDTVKSLSMTWCAQ DSSLAYERAFLAVSVKLLECVTRIDPERARQMVTPMTDMINGAIREFIQGQGGWKLKR QSTKYKADKTYPTAVAERPKNIKKNRYKDILPYDHSRVELSLITSDEDSSYINANFIK GVYGPKAYIATQGPLPTTTLDFWRMIWEYSVLIIVMACMEFEMGKEAENGKSDYIIRT LKVKFNSIIPENFSVFSLIQEMRTQRPSLVQTQEAYLMLTTHCDAGKKKRPFWGTVSL FYFCFNSIKEANKMNREGEQRIKMKNAETSSFDLRTSEISEKEALVLHPAKQNSSFEF LELNCSCNQNANISTAWEKKACPVVGGPLQKHQSLDLSSVLFGSCPKSKPVNAAGRLF NSKGPIMRTKSTPFELLQQTDTKELDSKEDFSYLETQLNNSYLEQAQNTMHVSSAELN YSLPYDSKQQTCNASNAKQCDSSAFNVHSYMSLVEDPYFPPSSPSCAGSKMSLDLPEK QNGTVLPCSLLPTSSITPRYDSRDSLSLNPPNNFPPTLSQETAVVATSPRIDDEIPPP LPERTPESFIVVEEAGEFPLSVPESLSSAVRAKIGTSLEWSGTSESNKPDHSIRLRPT KSVKIRSLKSDLHQDRSSPPPPLPERTRESFFLADEDCMQAQPIETYSTSCPNTMENT TSSKQTLKTPGKCFTRSKSLKILRNMKKSICNSSSPNKPPDSAQSNNSSPLLNFGMCV ISQQN" assembly_gap 13066291..13066338 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13066608..13066633 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13066671..>13079348) /locus_tag="PAL_GLEAN10017422" mRNA complement(join(<13066671..13066861,13071996..13072038, 13072085..13072269,13072558..13072765,13073501..13073604, 13074362..13074445,13075434..13075930,13076483..13076630, 13076983..13077113,13077574..13077798, 13079236..>13079348)) /locus_tag="PAL_GLEAN10017422" /product="AP-4 complex subunit beta-1" CDS complement(join(13066671..13066861,13071996..13072038, 13072085..13072269,13072558..13072765,13073501..13073604, 13074362..13074445,13075434..13075930,13076483..13076630, 13076983..13077113,13077574..13077798,13079236..13079348)) /locus_tag="PAL_GLEAN10017422" /note="GO_component: GO:0030117 - membrane coat [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="AP-4 complex subunit beta-1" /protein_id="ELK05925.1" /db_xref="InterPro:IPR002553" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q9Y6B7" /translation="MPYLGSEDVVKELKKALCNPHVQADRLRYRNVIQRVIRHMTRGL DMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVR GLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGAL VNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEV LNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILANKFPHVQTDVLVR VKGPLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE VLCELVNDENVQQVLEELRGYCTDVSGDFAQAAIFAIGGIARTYTDQCVQILTELLGL RQEHITTVVVQAFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGERI PNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAECQDTLGRLLHYCIEEEKD MAVRDRGLFYYRLLLAGVDEVKRILCSPKSDTSLRLLEDQAERPVNSWASDFNTLVPR AFFFPKTASFATSDTCYGVVLRRGTESLQNTSQFCVVSSSEKSQLSEGLFLKKGGGKG SRTICLIDMCPIRELFEK" assembly_gap 13073176..13073289 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13080209..>13085024 /locus_tag="PAL_GLEAN10017423" mRNA join(<13080209..13080397,13081067..13081232, 13081587..13081769,13084096..>13085024) /locus_tag="PAL_GLEAN10017423" /product="DNA cross-link repair 1B protein" CDS join(13080209..13080397,13081067..13081232, 13081587..13081769,13084096..13085024) /locus_tag="PAL_GLEAN10017423" /codon_start=1 /product="DNA cross-link repair 1B protein" /protein_id="ELK05926.1" /db_xref="InterPro:IPR011084" /db_xref="UniProtKB/Swiss-Prot:Q9H816" /translation="MNGVQIPHTPIAVDFWSLRRAASARLFFLTHMHSDHTVGLSSTW ARPLYCSPITAFLLHRQLQVSKKWIRALEVGESHVLPLDETGQETMTVTLMDANHCPG SVMFLFEGYFGTILYTGDFRYTPSMLKEPALRGGKQIHTLYLDNTNYNPELVLPSQEE AARQIVELIRKHPQHNVKIGLYSLGKESLLEQLALEFRTWVVLSPRRLELVQLLGLAD VFTVEEQAGRIHAVDRVEICHSAMLRWNQTHPTIAILPTSRKIHSSHPDIHVVPYSDH SSYSELCAFVTALKPCRVVPIVRRQPYRDHFQASLSPTLSVLPVPDSVQQHMSSSSRK PNVLWLLLERRLKKPRTQGVVFESLENADEPQADSASKRAKNENHSGKLEKQPSHGPL QIKKQLFPDFCRKEWDGTVPFSKSQKILTAPLGVSVHLRSTDEEFLSPETEEEIGVEP HVVPRGDXXXXXXXXXXXXXXXXXIRLCLTVVRQSLGA" assembly_gap 13084929..13084977 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13085998..13086035 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13094811..13095278 /estimated_length=468 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13107504..>13139697 /locus_tag="PAL_GLEAN10017424" mRNA join(<13107504..13108555,13115222..13115345, 13122112..13122231,13123022..13123108,13123780..13123964, 13124293..13124455,13125352..13125577,13129452..13129573, 13130437..13130571,13133184..13133329,13133714..13133896, 13134368..13134574,13136120..13136361,13137978..13138108, 13139209..>13139697) /locus_tag="PAL_GLEAN10017424" /product="Homeodomain-interacting protein kinase 1" CDS join(13107504..13108555,13115222..13115345, 13122112..13122231,13123022..13123108,13123780..13123964, 13124293..13124455,13125352..13125577,13129452..13129573, 13130437..13130571,13133184..13133329,13133714..13133896, 13134368..13134574,13136120..13136361,13137978..13138108, 13139209..13139697) /locus_tag="PAL_GLEAN10017424" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Homeodomain-interacting protein kinase 1" /protein_id="ELK05927.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q86Z02" /translation="MASQLQVFSPPSVSSSAFCSAKKLKIEPSGWDVSGQSSNDKYYT HSKTLPATQGQANSSHQVANFSIPAYDQGLLLPAPAVEHIVVTAADSSASAATTTFQS SQSLTHRSNVSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRTVVGAAATTT TVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAI KILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLY DFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVK VIDFGSASHVSKAVCSTAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQ IRYISQTQGLPAEYLLSAGTKTTRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARK YIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHQ FVTMTHLLDFPHSNHVKSCFQNMEICKRRVHMYDTVSQIKSPFTTHVAPNTSTNLTMS FSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPGVAQQGV SLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMDNAVPIVPQAPAAQ PLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLSCAAGRPALVEQTAAVLQA WPGGTQQILLPSTWQQLPGVALHNSVQPTAVIPEALGSGQQLTDWRRNAHSHGNQYST IMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSKKNKQSAPVSSKSSLDVLPS QVYSLVGSSPLRPTSSYNSLVPVQDQHQPIIIPDTPSPPVSVITIRSDTDEEEDNKYK PNSSGLKARSNVISYVTVNDSPDSDSSLSSPYSADTLSALRGNSGPLLEGPGRAMGDG SGTRTIIVPPLKTQLGDCTAATPASGLLSSKTKPVASVSGQSSGCCITPTGYRAQRGG TSAAQPLNLSQNQQSSSAPASQERSSNPAPRRQQAFVAPLSQAPYAFQHGSPLHSTGH PHLAPAPAHLPSQPHLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPSTLV HQVPVSVGPSLLTSASVAPAQYQHQFATQSYIGSSRGSTIYTGYPLSPTKISQYSYL" assembly_gap 13115443..13115518 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13118991..13119005 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13138586..13138610 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13145701..>13147904 /locus_tag="PAL_GLEAN10017425" mRNA join(<13145701..13145814,13146473..13146758, 13147084..>13147904) /locus_tag="PAL_GLEAN10017425" /product="Olfactomedin-like protein 3" CDS join(13145701..13145814,13146473..13146758, 13147084..13147904) /locus_tag="PAL_GLEAN10017425" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Olfactomedin-like protein 3" /protein_id="ELK05928.1" /db_xref="InterPro:IPR003112" /db_xref="UniProtKB/Swiss-Prot:Q9NRN5" /translation="MGPCAPLLVLLLLSWSGPLRGQQHHLVEYMERRLAALEERLAQC QDQSSRQAAELRDFKNKMLPLLEVAEKEREALRTEADTISGRVDRLEREVDYLETQNP ALPCVEVDEKATAGSGTKGKGRRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTK DPLGPTEKIYVLDGTQNDTAFVFPRLRDFTLAMAARKASRIRVPFPWVGTGQLVYGGF LYYARRPPGGPGGGGELENTLQLIKFHLTNRTVVDSSVFPAEGLIPPYGLTSDTYIDL AADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVV YNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHASLRYNPRERQLYAWDDGYQ IVYKLEMRRKEEEV" assembly_gap 13166142..13166275 /estimated_length=134 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13215984..>13253372) /locus_tag="PAL_GLEAN10017426" mRNA complement(join(<13215984..13216674,13218071..13218242, 13222546..13222850,13253203..>13253372)) /locus_tag="PAL_GLEAN10017426" /product="Synaptotagmin-6" CDS complement(join(13215984..13216674,13218071..13218242, 13222546..13222850,13253203..13253372)) /locus_tag="PAL_GLEAN10017426" /note="GO_component: GO:0008021 - synaptic vesicle [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Synaptotagmin-6" /protein_id="ELK05929.1" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR001565" /db_xref="InterPro:IPR008973" /db_xref="InterPro:IPR018029" /db_xref="InterPro:IPR020477" /db_xref="UniProtKB/Swiss-Prot:Q9R0N8" /translation="MADKLKDPNTLGFLEAAVKISHTSPDIPAEVQMSVKEHIMRHTR LQRQTTEPASSTRTGVWGLLRGQSLLNRRHCYDRLLCPVTPSMEARPSLSPEWPSSSS GGAACPSSALLSSSLQESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDP YVKVSLLCDGRRLKKKKTTIKKNTLNPVYNEAIIFDIPPENMDQVSLLISVMDYDRVG HNEIIGVCRVGISADGLGRDHWNEMLAYPRKPIAHWHSLVEVKKSFKEVGEGAPGPSM SAAWPRAGEWQAAAARPRLCGPLPRGVGAGRFSPSVTGREERKENGGELPGKRPLMLS ISKATLSSKWKRNTWRPSQQPTGPGLELSPGSGPSQSWGRKAQGGEIRTQQEILPPSE QKVPGGSGQTVGGSLHCLEGAGPRTEPAFLSAGSHHCRRGEQGLTVSHFLAGS" assembly_gap 13219794..13219804 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13225582..13225595 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13235510..13235519 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13240193..13240239 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13249904..13251395 /estimated_length=1492 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13261583..13261631 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13263378..13263895 /estimated_length=518 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13274401..13274794 /estimated_length=394 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13290123..13290317 /estimated_length=195 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13328753..13329349 /estimated_length=597 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13337512..13337531 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13346730..13346741 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13374788..13378218 /estimated_length=3431 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13380259..13380271 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13399439..>13489906) /locus_tag="PAL_GLEAN10017428" mRNA complement(join(<13399439..13399651,13399971..13400099, 13400179..13400229,13401676..13401828,13403414..13403488, 13404821..13404944,13407218..13407567,13408760..13408919, 13410907..13410970,13412375..13412507,13419314..13419514, 13421971..13422135,13422709..13422983,13424597..13424714, 13425172..13425318,13427354..13427468,13429057..13429173, 13448587..13448719,13448877..13449021,13449442..13449560, 13488909..13489211,13489846..>13489906)) /locus_tag="PAL_GLEAN10017428" /product="E3 ubiquitin-protein ligase TRIM33" CDS complement(join(13399439..13399651,13399971..13400099, 13400179..13400229,13401676..13401828,13403414..13403488, 13404821..13404944,13407218..13407567,13408760..13408919, 13410907..13410970,13412375..13412507,13419314..13419514, 13421971..13422135,13422709..13422983,13424597..13424714, 13425172..13425318,13427354..13427468,13429057..13429173, 13448587..13448719,13448877..13449021,13449442..13449560, 13488909..13489211,13489846..13489906)) /locus_tag="PAL_GLEAN10017428" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase TRIM33" /protein_id="ELK05930.1" /db_xref="InterPro:IPR000315" /db_xref="InterPro:IPR001487" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR001965" /db_xref="InterPro:IPR003649" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR019787" /db_xref="UniProtKB/Swiss-Prot:Q9UPN9" /translation="MRFPRRRACLWGRRRPGDARALAASAPAASVGPGVPGGAISTPA PAPASAPAPGPSAGPPLGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCLPE PERQLSVPIPGGSNGDIHQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSE QVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVGASGQR PVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKL LEKKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVT KERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKAR CDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQVPPGTNHISK TPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQML QQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQNAARIPGIPRHSGPQYSMMQPHLQRQ HSNPGHAGPFPVVSVHNTTINPTSPTTASMASANRGPTSPSVTAIELIPSVTNPENLP SLPDIPPIQLEDAGSSSLDNLLSRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNS HTPVRPPSTSSTGSRGSCGSSGRTAEKASLSFKSDQVKVKQEPGTEDEICSFSGAVKQ EKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKTEPTDSNESCKQS GLSSLVNGKSPIRSLMHRSARIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFH LTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDNLQHSKKGKTAQGLSPVDQRKCER LLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQVPDDFVA DVRLIFKNCERFNEMMRVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYSDR TFAPLPEFEQEEDDGEADSEVAQAGKAVALYFEDKLTEIYSDRTFAPLPEFEQEEDDG EVTEDSDEDFIQPRRKRLKSDERPVHIK" assembly_gap 13462211..13462227 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13489217..13489679 /estimated_length=463 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13508445..13508576 /estimated_length=132 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13510784..13510823 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13523919..13523939 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13526771..>13536917) /locus_tag="PAL_GLEAN10017429" mRNA complement(join(<13526771..13526897,13527945..13528025, 13528644..13528694,13531737..13531898,13533879..13533949, 13536624..13536716,13536825..>13536917)) /locus_tag="PAL_GLEAN10017429" /product="Pre-mRNA-splicing factor SPF27" CDS complement(join(13526771..13526897,13527945..13528025, 13528644..13528694,13531737..13531898,13533879..13533949, 13536624..13536716,13536825..13536917)) /locus_tag="PAL_GLEAN10017429" /codon_start=1 /product="Pre-mRNA-splicing factor SPF27" /protein_id="ELK05931.1" /db_xref="InterPro:IPR008409" /db_xref="UniProtKB/Swiss-Prot:Q9D287" /translation="MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYR PTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITA WQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHI QDLNWQRKNMQLTAGSKLREMESNWVSLVSKNYEIERTIVQLENEIFQIKQQHGEANK ENIRQDF" gene complement(<13539826..>13572410) /locus_tag="PAL_GLEAN10017430" mRNA complement(join(<13539826..13539857,13540882..13540968, 13541209..13541448,13545727..13545832,13546506..13546547, 13552047..13552224,13552700..13552848,13553332..13553472, 13554048..13554125,13554643..13554712,13556313..13556422, 13560003..13560190,13561986..13562030,13566337..13566433, 13569565..13569735,13570333..13570445,13570875..13571011, 13571617..>13572410)) /locus_tag="PAL_GLEAN10017430" /product="DENN domain-containing protein 2C" CDS complement(join(13539826..13539857,13540882..13540968, 13541209..13541448,13545727..13545832,13546506..13546547, 13552047..13552224,13552700..13552848,13553332..13553472, 13554048..13554125,13554643..13554712,13556313..13556422, 13560003..13560190,13561986..13562030,13566337..13566433, 13569565..13569735,13570333..13570445,13570875..13571011, 13571617..13572410)) /locus_tag="PAL_GLEAN10017430" /codon_start=1 /product="DENN domain-containing protein 2C" /protein_id="ELK05932.1" /db_xref="InterPro:IPR001194" /db_xref="InterPro:IPR005112" /db_xref="InterPro:IPR005113" /db_xref="UniProtKB/Swiss-Prot:Q68D51" /translation="MDVGFSRSTVQTLSRSHCKNIKQKISQWEGRTNGISNPDKWHSK DFGVRYNNCHQEILXXXXXXSKKLDGTNSQNVGLDINDDAKSHDQSEDENEKREYDDT RFFKNESESNWVCSRVKQIESWKEVVLDPETALPLGNFYTSPILWKKIEALPPDKVLN LALERCDSSEKELNFRVLDSSYGITKSLENIYSEPEGQECGLSINPLPKPRRTFRYLS ESGVSYKERNCDRKYCENNSCAESSLASTREPESKKYGGKIRGRSKRKSFEFEDIQHF RNRNTEKMHEELGRNSGSALYYTQSQDNIYEDILYPTKENPYEDIPVQSFPMWRSPSA WKLPPPKSAFRAPKLPPKPHFLNRKTMELKNSQAYLRAKLTKDTTLPVTLTEWKLFRA GEVANRKRKNLPRLVLKIDDIFESKRGKKRVKLHPYNGKDVPPSKGETSGNESDGEYL PKSRHKRLAQVQQSSKRNPHYQTLERDLIELQEQQLFELFVVVSLKKRPSGVGYVPQV IQQFPGQSDHGFKQSKDTEERLKVIPKFCFPDSKDWVPTSELKSETFSFVLTGEDGSR WFGYCKKFVPEGKGKRLPEVYCMVSRLGCFNLFSKILDEVEKRREMSPALVYPFMRSV MEAPFPAPGCTITVRSYLPGAGDGSIELCRPLDSRLEHVDFECLFKCLSVCHLIRVCA SLLLERRVIFVANSLSTLSKCGHAVVATLYPFTWQHTYIPVLPASMIDIVCSPTPFLI GILSCSLPQLQDLPIEEVLIVDLCADKFLQEVSDEDEILPPKLQAALMQILEERNEIL AQEQKFSPADLTLNSLVSEAFVRFFVELVGHYSFSMTVTERGERVFQREPFRKSHTSR SVRHFLDLFMETQMFAGFIQDRELRKSGVKGLFEVRAFQYLETIPESEPSGVNRILRS LGSKMKFLQKK" assembly_gap 13565410..13565670 /estimated_length=261 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13572220..13572234 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13574945..13574985 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13607659..13608393 /estimated_length=735 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13608695..>13624259) /locus_tag="PAL_GLEAN10017431" mRNA complement(join(<13608695..13609301,13610917..13611062, 13611666..13611839,13612512..13612632,13613186..13613349, 13613533..13613659,13614664..13614827,13615607..13615738, 13616032..13616226,13617264..13617393,13617894..13618113, 13620416..13620581,13622616..13622781, 13624096..>13624259)) /locus_tag="PAL_GLEAN10017431" /product="AMP deaminase 1" CDS complement(join(13608695..13609301,13610917..13611062, 13611666..13611839,13612512..13612632,13613186..13613349, 13613533..13613659,13614664..13614827,13615607..13615738, 13616032..13616226,13617264..13617393,13617894..13618113, 13620416..13620581,13622616..13622781,13624096..13624259)) /locus_tag="PAL_GLEAN10017431" /note="GO_function: GO:0019239 - deaminase activity [Evidence IEA]; GO_process: GO:0009168 - purine ribonucleoside monophosphate biosynthetic process [Evidence IEA]" /codon_start=1 /product="AMP deaminase 1" /protein_id="ELK05933.1" /db_xref="InterPro:IPR001365" /db_xref="UniProtKB/Swiss-Prot:P23109" /translation="MRSFAEKVFASEVKDEGGRQEISPFDVDEICPISHLEMQAHIFQ MEARSTSEGRRKRRFFGRKTVNLSIPQSETSSAKMSHIDEYISSSPTYQTVPDFQRVQ ITGDYASGVTVEDFEVVCKGLYRALCIREKYMQKSFQRFPKTPSKYLRNIENEAWVAN ENFYPVFTPPVKKGEDPFRTDDLPENLGYHLRMKDGVVYIYPNEAAASKDEPKPLPYP NLDTFLDDMNFLLALIAQGPVKTYAHRRLKFLSSKFQVHEMLNEMDELKELKNNPHRD FYNCRKVDTHIHAAACMNQKHLLRFIKKSYQIDADRVVYGTKEKNLTLKELFAKLKMH PYDLTVDSLDVHAGRQTFQRFDKFNDKYNPVGASELRDLYLKTDNYIDGEYFATIIKE VGTDLVEAKYQHAEPRLSIYGRSPDEWRKLSTWFVRNRIHCPNMTWMIQIPRIYDVFR SKNFLPHFGKMLENIFMPIFEATVNPQAHPDLSIFLKRISGFDSVDDESKHSGHMFSS KSPKPHEWTMESNPSYTYYAYYMYANITVLNSLRKERGMNTFLFRPHCGEAGALTHLL TAFMTADNISHGLNLKKSPVLQYLFYLAQIPIAMSPLSNNSLFLEYAKNPFLDFLQKG LMISLSTDDPMQFHFTKEKARFLGNNYLEEGPFGNDIRRTNVAQIRMAYRYETWCYEL NLIAECLKCAAFIALAKLACDSHLRCVTKRLCFWKSSILVPLCEQMWEEFGHQTQEAL VEWGGMGQGEAGGVVSQRLENRLNSSLTRSFSETGLLLAVGTAPCTYLSMSVLQAKCS CMCVTTGRGGRPQALGVSKAPVLWDFKPQVFGALFTSTFQAGTVLQLPEKCLLLELSQ RNGAVVPLETRGLLHPIAGDNSVVSLREVPFGFLD" assembly_gap 13617199..13617212 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13626479..13626524 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13640495..>13645462) /locus_tag="PAL_GLEAN10017432" mRNA complement(join(<13640495..13640614,13641131..13641290, 13642771..13642949,13645352..>13645462)) /locus_tag="PAL_GLEAN10017432" /product="GTPase NRas" CDS complement(join(13640495..13640614,13641131..13641290, 13642771..13642949,13645352..13645462)) /locus_tag="PAL_GLEAN10017432" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0015031 - protein transport [Evidence IEA]" /codon_start=1 /product="GTPase NRas" /protein_id="ELK05934.1" /db_xref="InterPro:IPR001806" /db_xref="InterPro:IPR003577" /db_xref="InterPro:IPR003578" /db_xref="InterPro:IPR003579" /db_xref="InterPro:IPR013753" /db_xref="InterPro:IPR020849" /db_xref="UniProtKB/Swiss-Prot:Q2MJK3" /translation="MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQV VIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKR VKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLV REIRQYRMKKLNSSDDGTQGCMGLPCVVM" gene complement(<13647493..>13667867) /locus_tag="PAL_GLEAN10017433" mRNA complement(join(<13647493..13647540,13647900..13648032, 13648768..13648931,13649774..13649952,13652350..13652469, 13653478..13653590,13654144..13654319,13657756..13657920, 13658002..13658142,13659699..13659911,13660528..13660653, 13660770..13660898,13661234..13661315,13663552..13663649, 13664256..13664348,13664746..13664855,13665838..13666036, 13667736..>13667867)) /locus_tag="PAL_GLEAN10017433" /product="Cold shock domain-containing protein E1" CDS complement(join(13647493..13647540,13647900..13648032, 13648768..13648931,13649774..13649952,13652350..13652469, 13653478..13653590,13654144..13654319,13657756..13657920, 13658002..13658142,13659699..13659911,13660528..13660653, 13660770..13660898,13661234..13661315,13663552..13663649, 13664256..13664348,13664746..13664855,13665838..13666036, 13667736..13667867)) /locus_tag="PAL_GLEAN10017433" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Cold shock domain-containing protein E1" /protein_id="ELK05935.1" /db_xref="InterPro:IPR002059" /db_xref="InterPro:IPR011129" /db_xref="InterPro:IPR016027" /db_xref="UniProtKB/Swiss-Prot:O75534" /translation="MENVFPVSSDPHPSPAAPPSLSLSSSSTSSGTKKQKRTPMYQRS MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNG NLQDLKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEILPEERMNGQVVCAVPHNLESKS PAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSAR NIMLLKKKQARCQGVVCAMKEAFGFIERGDIVKEIFFHYSEFKDDLETLQPGDDVEFT IKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQSDPLPGRIKVD FVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAR EMGVIAAMRDGFGFIKCVDRDARMFFHYSEVLDGNQLHIADEVEFTVVPDMLSAQRNH AIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKVEFSISDKQRPG QQIATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLEL GDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGKVIRPLRSVDPTQTEYQ GMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLGQNAQTMAYNITPLR RATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFSVILNQRTGKCSA CNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPDNSMGFGAERK IRQAGVID" gene complement(<13689084..>13693204) /locus_tag="PAL_GLEAN10017434" mRNA complement(join(<13689084..13689185,13690439..13690552, 13691711..13691853,13692707..13692812, 13693046..>13693204)) /locus_tag="PAL_GLEAN10017434" /product="Suppressor of IKK-epsilon" CDS complement(join(13689084..13689185,13690439..13690552, 13691711..13691853,13692707..13692812,13693046..13693204)) /locus_tag="PAL_GLEAN10017434" /codon_start=1 /product="Suppressor of IKK-epsilon" /protein_id="ELK05936.1" /db_xref="InterPro:IPR008555" /db_xref="UniProtKB/Swiss-Prot:Q9BRV8" /translation="MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMR EAGTALPDQYQEDASDIKDMSKYKPHILLSQENTQIRDLQQENRELWVSLEEHQDALE LIMSKYRKQMLQLMVAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDD DQFCKIQEKLAQLELENKELRELLSISSESLQVRKENSMDTASQAIK" assembly_gap 13704406..13704444 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13705971..13709057 /estimated_length=3087 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13714940..>13726487 /locus_tag="PAL_GLEAN10017435" mRNA join(<13714940..13715003,13717032..13717394, 13719011..13719151,13720541..13720680,13720771..13720875, 13721014..13721113,13721616..13721738,13724457..13724632, 13726245..>13726487) /locus_tag="PAL_GLEAN10017435" /product="Bile acid receptor" CDS join(13714940..13715003,13717032..13717394, 13719011..13719151,13720541..13720680,13720771..13720875, 13721014..13721113,13721616..13721738,13724457..13724632, 13726245..13726487) /locus_tag="PAL_GLEAN10017435" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO_function: GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Bile acid receptor" /protein_id="ELK05937.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR008946" /db_xref="UniProtKB/Swiss-Prot:Q3SZL0" /translation="MANTHVTPSDGYCLAEWVQYYDILPEQINYQLHDTDFQESPYCQ YSTVQFPEALQSSSLQSHFNAYSLDTQFNGGECQLGPCELNKSTYVVARNAEDGYPGI KRSKLPHSSMRIKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYSCKNG GHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEIQCKSKRLRKNFKQNSFHSNIKVE EEGVDNKLVSSTTRSGKVTQESVELTRDEHWLINNIVAAHQKYKIPLEETKKFLQEYA NPELSFLRLSETVVLHIKGLMDFTKGLPGFENLTSEDKTALRKGSKTEVMFLHAAQLY SQKEWFSSASENRPCLKNKQHVENLQEPILQILYKYSKIYHPEDLQHFARLIGRLTEL RTLSHNHSEILSYSSLVIFSLRPHNLHHTSRTHSLLYDAHNSSAFAHLSSAGNPLSPI HSLANSLFTLLFSTEAVTEAQHTLNKADSALELP" gene <13727450..>13754445 /locus_tag="PAL_GLEAN10017436" mRNA join(<13727450..13727557,13728541..13728625, 13728823..13728866,13730206..13730370,13738102..13738170, 13741191..13741299,13748242..13748336,13748834..13749018, 13754139..>13754445) /locus_tag="PAL_GLEAN10017436" /product="Synaptonemal complex protein 1" CDS join(13727450..13727557,13728541..13728625, 13728823..13728866,13730206..13730370,13738102..13738170, 13741191..13741299,13748242..13748336,13748834..13749018, 13754139..13754445) /locus_tag="PAL_GLEAN10017436" /note="GO_component: GO:0000795 - synaptonemal complex [Evidence IEA]; GO_component: GO:0005874 - microtubule [Evidence IEA]; GO_component: GO:0043234 - protein complex [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007017 - microtubule-based process [Evidence IEA]; GO_process: GO:0007130 - synaptonemal complex assembly [Evidence IEA]; GO_process: GO:0051258 - protein polymerization [Evidence IEA]" /codon_start=1 /product="Synaptonemal complex protein 1" /protein_id="ELK05938.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008827" /db_xref="UniProtKB/Swiss-Prot:Q60563" /translation="MDMQQPLALFMPPRLSSSQGSAVKPQTLEGDSNFIKSFGKCIED DFSFPFAMTNLSKDEKNIDSDPALQKVNILPMLEQNSEPMSKLYSKLYKEAEKIKKWK VDVESELKQKENKLQENRKIIEAQRKAIQELQEDYEKFQHLEEMHKKEVDDKEEQVSL LLIQSTEKEKKMRDITVLLEEYRDKINQLEEKTKLQNDILKESNEKKDFLTSELEDSK MSLQINMSTQKALEEDLQIATKKIYQLTGEKEAQMEEFNKAKAAHAFVVTELKTTVCH LKELLTTEHQSETGAGKHVPRAVFVDLKPMVIHGVHTGTYRQLTPPLCPKQLIPGKED ATSNYAHGHSAIGKEIIGLVLDQFGSWLTSEQVFRASEFSTALVGDLVLCSPPC" assembly_gap 13741653..13741670 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13743157..13743222 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13755199..>13797062 /locus_tag="PAL_GLEAN10017438" mRNA join(<13755199..13755279,13760458..13760562, 13761370..13761473,13762882..13762999,13772011..13772073, 13772239..13772301,13774961..13775077,13775465..13775575, 13776714..13776806,13777303..13777377,13783364..13783423, 13786523..13786702,13792260..13792403,13796740..13796829, 13796925..>13797062) /locus_tag="PAL_GLEAN10017438" /product="Synaptonemal complex protein 1" CDS join(13755199..13755279,13760458..13760562, 13761370..13761473,13762882..13762999,13772011..13772073, 13772239..13772301,13774961..13775077,13775465..13775575, 13776714..13776806,13777303..13777377,13783364..13783423, 13786523..13786702,13792260..13792403,13796740..13796829, 13796925..13797062) /locus_tag="PAL_GLEAN10017438" /note="GO_component: GO:0000795 - synaptonemal complex [Evidence IEA]; GO_process: GO:0007130 - synaptonemal complex assembly [Evidence IEA]" /codon_start=1 /product="Synaptonemal complex protein 1" /protein_id="ELK05939.1" /db_xref="InterPro:IPR008827" /db_xref="UniProtKB/Swiss-Prot:Q15431" /translation="MEKRELSVVHEDMTALEKVGVDSVKEKAENQKLLDEKKQFEKIA EELKGTEQELTGLLQSREKKIHDLEIQLTAIATSEQHYSKQVKELKTELENEKLKNIE LTASCNKLSLENKELAQETSDMALELKKRQEDINCNNLRKQVENKSKHIEELQQENKA LKKKSTAESKQLNVYEIKVSKLELELEGAKQKVKEMTDNCQKEIEDKKISEENLLREV DKAKVIADEAVKLQREIDIRCQHKIAEMVALMEKHKHQYDKIVEERDSELGFYKSKEQ EHLSMKESLEIELSNLKNELSSLKKQLEIEREEKEKVKREAKEHTATLKEKKDKKIQT SLSETLETGCRKFDSKTAPLPNVPRNFTSADHGKSKDKRDYLWTAPKSTLSTPLPKVY TVKTPTKLKIQQRENKNVPIEESNKKRKMFFEFDINSDSSETTDLLSMVSEEETLRKL HKNSNSPTSHLCVRTPKKTHSSLTTPGSELKFGAMRKIQEDRWAVIAKMDRKKKLKEA EKLFV" assembly_gap 13792033..13792061 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13799434..13799471 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13817121..>13817996 /locus_tag="PAL_GLEAN10017439" mRNA join(<13817121..13817282,13817742..>13817996) /locus_tag="PAL_GLEAN10017439" /product="Thyrotropin subunit beta" CDS join(13817121..13817282,13817742..13817996) /locus_tag="PAL_GLEAN10017439" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005179 - hormone activity [Evidence IEA]" /codon_start=1 /product="Thyrotropin subunit beta" /protein_id="ELK05940.1" /db_xref="InterPro:IPR001545" /db_xref="InterPro:IPR006208" /db_xref="UniProtKB/Swiss-Prot:P54828" /translation="MSALFLISMLFGLAFGQATSFCIPTEYIMHVERKECAYCLSVNT TICAGYCMTRDINGKLFLPKYALSQDVCTYRDFMYKTVEIPGCPRHVTSYFSYPVAVS CKCGKCNTDYSDCIHEAIKTNYCTKPQKSYVVGFSI" assembly_gap 13822626..13822660 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13826902..>13832388) /locus_tag="PAL_GLEAN10017440" mRNA complement(join(<13826902..13826967,13829510..13829593, 13832332..>13832388)) /locus_tag="PAL_GLEAN10017440" /product="Tetraspanin-2" CDS complement(join(13826902..13826967,13829510..13829593, 13832332..13832388)) /locus_tag="PAL_GLEAN10017440" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Tetraspanin-2" /protein_id="ELK05941.1" /db_xref="InterPro:IPR018499" /db_xref="UniProtKB/Swiss-Prot:O60636" /translation="MKSDIGREGCLSNTLALGKNCIDEIETIISVKLQLIGIVGIGIA GLTIFGMIFSMVLCCAIRNSRDVI" assembly_gap 13831127..13831138 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13835207..>13841391) /locus_tag="PAL_GLEAN10017441" mRNA complement(join(<13835207..13835350,13836592..13836690, 13837992..13838066,13839320..13839417, 13841250..>13841391)) /locus_tag="PAL_GLEAN10017441" /product="Tetraspanin-2" CDS complement(join(13835207..13835350,13836592..13836690, 13837992..13838066,13839320..13839417,13841250..13841391)) /locus_tag="PAL_GLEAN10017441" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Tetraspanin-2" /protein_id="ELK05942.1" /db_xref="InterPro:IPR000301" /db_xref="InterPro:IPR008952" /db_xref="InterPro:IPR018499" /db_xref="UniProtKB/Swiss-Prot:O60636" /translation="MFLQGPVPRPGSQGESVDCHLAVGGNERHEQEVDRIRQPTRETF CEGGLYVLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIG KGVAIRHVQTMYEEAYIDYLKDREKGNGTLITFHSTFQCCGKESSEQVQPTCPKELLG PKVSFSSRPSPACSVRRFSHSGGPA" assembly_gap 13842151..13842202 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13846488..13846549 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13851297..13851456 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13865976..13866218 /estimated_length=243 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13898351..13898442 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13927334..13927395 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13961355..13962970 /estimated_length=1616 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13969818..13969842 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14003046..>14020304) /locus_tag="PAL_GLEAN10017442" mRNA complement(join(<14003046..14003849,14005618..14005675, 14010638..14010761,14015520..14015649, 14020116..>14020304)) /locus_tag="PAL_GLEAN10017442" /product="Beta-nerve growth factor" CDS complement(join(14003046..14003849,14005618..14005675, 14010638..14010761,14015520..14015649,14020116..14020304)) /locus_tag="PAL_GLEAN10017442" /note="GO_function: GO:0005102 - receptor binding [Evidence IEA]" /codon_start=1 /product="Beta-nerve growth factor" /protein_id="ELK05943.1" /db_xref="InterPro:IPR002072" /db_xref="InterPro:IPR020425" /db_xref="InterPro:IPR020437" /db_xref="UniProtKB/Swiss-Prot:P13600" /translation="MAVEAMTVGVAVLPRSPHPDERPDVCERRERCEEWAEREGTEVR GLDEHSAQSVGTALAWNFEAQSKNERREERIKGNGCSNENHSDSTGNDYYALSNMFLM LNIIKSWPVVVQSRWLDGMLDPSSAQRPGPITAFPRKQLSVLATPRTSQPVGRQAQIV MLRKKLEVHSVMSMLFYTLITALLIGIQAEPQAESNVPAGHAGPQAHWTTLQHSLDTA LRRAHRAPAGPIAARVAGQTHNITVDPKLFKKRRLRSPRVLFSTQPPPVTADADAAQH LDVEAGGSAPFNRTHRSKRSATHPVFHRGEFSVCDSISVWVGDKTTATDIKGKEVMVL GEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDAKHWNSYCTTTHTFVKALTMDDKKA AWRFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAPPYLSL" assembly_gap 14003077..14003159 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14003917..14003926 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14015901..14015977 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14028338..14028362 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14033266..14033312 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14035710..14035799 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14044365..14044514 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14063974..14064013 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14091771..14091889 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14112787..14112826 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14124838..14125014 /estimated_length=177 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14128487..>14132419) /locus_tag="PAL_GLEAN10017443" mRNA complement(join(<14128487..14128745,14132355..>14132419)) /locus_tag="PAL_GLEAN10017443" /product="hypothetical protein" CDS complement(join(14128487..14128745,14132355..14132419)) /locus_tag="PAL_GLEAN10017443" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05944.1" /translation="MRQAQRCLRELCLPAELLIRTRSSEGETRTNNSSRLCRMATNQG WRVGSRPLMPRGRNSSRLLLAQPPAPSPHAVTPGLWFKFISGLSALPAPPQWLATEQD QGGWM" gene complement(<14135231..>14135750) /locus_tag="PAL_GLEAN10017444" mRNA complement(join(<14135231..14135343,14135504..>14135750)) /locus_tag="PAL_GLEAN10017444" /product="hypothetical protein" CDS complement(join(14135231..14135343,14135504..14135750)) /locus_tag="PAL_GLEAN10017444" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05945.1" /translation="MVSFWPMDCQSQRDCSRVNASCPPLPTDRGGHGPPLPSAATATT WNTGRGRHLWGGLSPGARDKDDTPPPPGSPKRPLLKQPELSLDPPPVPLLPVPGSGTP EKALQERPLLQLKGPSL" assembly_gap 14136160..14137136 /estimated_length=977 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14137941..14137958 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14147648..14147671 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14152733..14152833 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14199303..14200487 /estimated_length=1185 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14204191..14204204 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14205212..14205290 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14215536..>14244509 /locus_tag="PAL_GLEAN10017445" mRNA join(<14215536..14215591,14216286..14216418, 14220375..14220982,14236807..14236940,14238494..14238626, 14239303..14239537,14244249..>14244509) /locus_tag="PAL_GLEAN10017445" /product="Vang-like protein 1" CDS join(14215536..14215591,14216286..14216418, 14220375..14220982,14236807..14236940,14238494..14238626, 14239303..14239537,14244249..14244509) /locus_tag="PAL_GLEAN10017445" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]" /codon_start=1 /product="Vang-like protein 1" /protein_id="ELK05946.1" /db_xref="InterPro:IPR009539" /db_xref="UniProtKB/Swiss-Prot:Q8TAA9" /translation="MAERFHNHPGKTSQETHLEERNRERHKSPRNKDGRGSEKSVTIQ APPGEPLLANDSAQTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDC KRYLGLTVASVLGLLVFLTPIAFILLPPILWREELEPCGTICEGLFISVAFKLLILLI GTWALFFRKQRADVPRVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYA VSLVDALLFIHYLAIVLLELRQLQPTFTLHVVRSTDGESRFYSLGHLSIQRAALVVLE NYYKDFTIYNPNLLTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSS HNELYYEEADHERRVKKRRARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAI FPSMARALQKYLRTTRQQQYHSMESILQHLAFCVTNSMTPKAFLERYLSAGPTLQYDK ERWLSTQWRLLSEEAVTKGLQDGIVFVLKCLDFSLVVSVKKIPFIVLSEEFVDPKSHK FVLRLQSETSV" assembly_gap 14233303..14233700 /estimated_length=398 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14238407..14238456 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14248200..>14304195) /locus_tag="PAL_GLEAN10017446" mRNA complement(join(<14248200..14248307,14257783..14257857, 14258241..14258394,14259610..14259850,14269551..14269605, 14273083..14273128,14274221..14274351,14279797..14279870, 14282513..14282678,14284075..14284175,14286765..14286849, 14303962..>14304195)) /locus_tag="PAL_GLEAN10017446" /product="Calsequestrin-2" CDS complement(join(14248200..14248307,14257783..14257857, 14258241..14258394,14259610..14259850,14269551..14269605, 14273083..14273128,14274221..14274351,14279797..14279870, 14282513..14282678,14284075..14284175,14286765..14286849, 14303962..14304195)) /locus_tag="PAL_GLEAN10017446" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="Calsequestrin-2" /protein_id="ELK05947.1" /db_xref="InterPro:IPR001393" /db_xref="InterPro:IPR012336" /db_xref="UniProtKB/Swiss-Prot:P12637" /translation="MKKTHLFVVGVCLLSSCRAEEGLNFPTYDGKDRVVSLTEKNFKQ VLKKYDLLCLYYHEPVSSDKTAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKL AKKLGFHEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFER IEDQIKLIGFFKTEDSECKLSVKPRLSVWWLGSQQDFKAFEEAAQHFQPYIKFFATFD KGVAKKLSLKMNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKDHQRPTLRRLRPEDMF ETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLVSG SDGGPTLGHLRGLAFVFSVRPCCMKEAVKWERRLQEPSGHLHLGPVASDSFSASLARD ESMWDPNLANEETPFTRMPAYGTSLPEQPAHVAEWHQLVAYWEKTFKIDLFKPQIGVV NVTDVSVLRQESNGLACGTAGSPEDISVLKPFTPGEKPV" assembly_gap 14314135..14314203 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14325326..14325355 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14344247..14344358 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14345608..14346833 /estimated_length=1226 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14355080..>14355487) /locus_tag="PAL_GLEAN10017447" mRNA complement(<14355080..>14355487) /locus_tag="PAL_GLEAN10017447" /product="Helix-loop-helix protein 2" CDS complement(14355080..14355487) /locus_tag="PAL_GLEAN10017447" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Helix-loop-helix protein 2" /protein_id="ELK05948.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="UniProtKB/Swiss-Prot:Q02577" /translation="MMLSPDQAADSDHPSSAHSDPESLGGADAKVLGSVSDLEPVEEA EGDGKGGSRAALYPHPQQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFAELRK LLPTLPPDKKLSKIEILRLAICYISYLNHVLDV" assembly_gap 14355630..14355774 /estimated_length=145 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14416117..14416156 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14442995..14443056 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14443311..14443777 /estimated_length=467 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14453705..>14499000 /locus_tag="PAL_GLEAN10017448" mRNA join(<14453705..14453935,14470292..14470424, 14471079..14471232,14472527..14472681,14476599..14476728, 14480893..14481108,14484784..14484924,14486821..14486906, 14494161..14494281,14495718..14495790,14498444..14498632, 14498914..>14499000) /locus_tag="PAL_GLEAN10017448" /product="Solute carrier family 22 member 15" CDS join(<14453705..14453935,14470292..14470424, 14471079..14471232,14472527..14472681,14476599..14476728, 14480893..14481108,14484784..14484924,14486821..14486906, 14494161..14494281,14495718..14495790,14498444..14498632, 14498914..14499000) /locus_tag="PAL_GLEAN10017448" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Solute carrier family 22 member 15" /protein_id="ELK05949.1" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="UniProtKB/Swiss-Prot:Q8IZD6" /translation="VCLLLQLYVATEAILITLVGATPSYHWDLAELHPNQSHGNQSAG GDQALGAWLLTANGSEIHKHVHFSGGFTSIASEWFLIANRSYKVSAASSFFFSGVFVG VISFGQLSDRFGRKKVYLTGFALDILFAVANGFSPSYEFFAITRFLVGVMNGGMSLVA FVLLGHCLLGTRSCGKEKREKGENPQRWNQVAATRDRSDCESIPEASALTGTPDRGTI PVAPGARSIGGLFFAVGIAQYALLGYFVRSWRTLAVLVNLQGTVAFLLSLFIPESPRW LYSQGRLSEAEAALYLIAKRNRKFKCTFSLTHPANRSCRETGSFLDLFRYRILLGHTL TLMFIWFVCSLVYYGLTLSAGDLGGNMYANLALSGLIEIPSYPLCIYLVNQKWFGRKR TLAAFLCLGGLACLIVMFLPEKKDTGAFAVLNSRSLSLLGKLTISAAFNVVYIYTSEL YPTVIRNVGLGTCSMFSRVGGIIAPFVPSLKYVQWSLPFIVFGATGLVSGLLSLLLPE TLNSPLLETVSDLQVYSYWRLGEEALSLQTLDTPQSVDKERVGSESEEEEEFYDADEE TQMIK" assembly_gap 14488252..14488288 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14511153..14511186 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14532951..14532978 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14533136..>14549405 /locus_tag="PAL_GLEAN10017449" mRNA join(<14533136..14533213,14538577..14538717, 14540882..14541173,14543649..14543827,14544314..14544508, 14549172..>14549405) /locus_tag="PAL_GLEAN10017449" /product="hypothetical protein" CDS join(14533136..14533213,14538577..14538717, 14540882..14541173,14543649..14543827,14544314..14544508, 14549172..14549405) /locus_tag="PAL_GLEAN10017449" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05950.1" /db_xref="InterPro:IPR020950" /db_xref="UniProtKB/Swiss-Prot:Q8N8X9" /translation="MGEGRKVAQEGDVRMYVGARMYVGAHVYLRRQRVSKTVQELQKV IYRLTTDVSNQDVRFQAVPYSLAYDGNLKVLAPSQFLVTVPVRGLGGYREPREHRWRY YTLQGTRLPCPLRDPEGLQQWLAVRQFMKSLWQWHEADVNIEGDIVPAKVLQVFRKLV ENAIETCHLSGKVSVLTNSTAVRVAVETSEGQVELELAPAVEIPNAWSKRARWPRCLT RWPSPERVECIKSFGFALLARSNYHWQLSFLQAEQVLLEQLDEDGGCRRKCFQAMRQM KEDVWCPGKRPVISSHHLQMVLFWTCEKYPHSKDWQVFSKGFLRLVRKLHKCASQRFL KHFFVPKSNLLQCASSGELDALAQKLACFLKDPQIGLP" assembly_gap 14556171..14556219 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14577798..14581644 /estimated_length=3847 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14586801..14587979 /estimated_length=1179 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14613833..14614768 /estimated_length=936 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14636321..14638230 /estimated_length=1910 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14666726..14666736 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14675238..14675312 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14680547..14680665 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14693246..14693366 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14727496..14727531 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14730011..14731061 /estimated_length=1051 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <14740504..>14757580 /locus_tag="PAL_GLEAN10017451" mRNA join(<14740504..14740533,14740900..14740959, 14742502..14742705,14743593..14743706,14744124..14744258, 14744360..14744477,14744905..14745173,14745657..14745855, 14746121..14746230,14748124..14748258,14748774..14748966, 14750021..14750196,14751171..14751307,14752047..14752197, 14752716..14752884,14753007..14753161,14753498..14753621, 14754617..14754762,14754864..14754994,14755256..14755357, 14757109..14757200,14757552..>14757580) /locus_tag="PAL_GLEAN10017451" /product="Sodium/potassium-transporting ATPase subunit alpha-1" CDS join(14740504..14740533,14740900..14740959, 14742502..14742705,14743593..14743706,14744124..14744258, 14744360..14744477,14744905..14745173,14745657..14745855, 14746121..14746230,14748124..14748258,14748774..14748966, 14750021..14750196,14751171..14751307,14752047..14752197, 14752716..14752884,14753007..14753161,14753498..14753621, 14754617..14754762,14754864..14754994,14755256..14755357, 14757109..14757200,14757552..14757580) /locus_tag="PAL_GLEAN10017451" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO_function: GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO_process: GO:0006754 - ATP biosynthetic process [Evidence IEA]; GO_process: GO:0006812 - cation transport [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Sodium/potassium-transporting ATPase subunit alpha-1" /protein_id="ELK05951.1" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR004014" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006068" /db_xref="InterPro:IPR006069" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR023214" /db_xref="InterPro:IPR023306" /db_xref="UniProtKB/Swiss-Prot:P05023" /translation="MDELKKEVSMDDHKLSLDELHRKYGTDLSRGLTSARAAEILARD GPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAATEEEPQNDNLYLG VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEDVVVGDLV EVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNC VEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIEHFIHLITGVAVFLGVSFF ILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVE TLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKSSATWIALSR IAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKEMREQYAKIVEIP FNSTNKYQLSIHKNPNTSEPRHLLVMKGAPERILDRCSSILLHGKEQPLDEELKDAFQ NAYLELGGLGERVLGFCHLFLPDEQFPEGFQFDTDDVNFPIENLCFVGLISMIDPPRA AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQV NPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVA VTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDN LKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAES DIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPIHLLGIR VDWDDRWINDVEDSYGQQWTYEQRKIVEFTCHTAFFVSIVVVQWADLVICKTRRNSVF QQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDE VRKLIIRRSPGGWVEKETYY" assembly_gap 14760146..14760602 /estimated_length=457 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14764873..14764977 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14818742..14818782 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14819944..14820095 /estimated_length=152 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14826811..14827144 /estimated_length=334 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14827529..14827575 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14837133..14837162 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14866450..14866773 /estimated_length=324 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14884156..14884216 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<14886836..>15021302) /locus_tag="PAL_GLEAN10017453" mRNA complement(join(<14886836..14887086,14889103..14889579, 14893842..14894249,14898371..14898781,14910280..14910684, 14913743..14914144,14916520..14916579,14917964..14918353, 14923404..14923814,14925852..14926229, 15021233..>15021302)) /locus_tag="PAL_GLEAN10017453" /product="Immunoglobulin superfamily member 3" CDS complement(join(14886836..14887086,14889103..14889579, 14893842..14894249,14898371..14898781,14910280..14910684, 14913743..14914144,14916520..14916579,14917964..14918353, 14923404..14923814,14925852..14926229,15021233..15021302)) /locus_tag="PAL_GLEAN10017453" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Immunoglobulin superfamily member 3" /protein_id="ELK05952.1" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="UniProtKB/Swiss-Prot:O75054" /translation="MDQEPSSTVIGDEHLITLPLTPLGKVTAQRQVAVQEGPLYRTEG SHITIWCNVSGYQGPSEQNFQWSIYLPSAPEREVQIVSTVDPSFPYAIYTQRVRSGKI YVERVQDHSALLHITELQARDAGEYECHTPNTDERYFGSYSAKMNLVVIPDSLQTTAM PQTLHKVEQDPLELTCEVVTETFQHSHLSVAWLRQRGSEKPVEVIALSRDFVLHSGSE YAQRQSLGEVRLDKLGSTTFRLTVFHLQPSDQGEFYCEAAEWVQDPDGSWYAMTRKRS EGTVVTVQPTDKEFTVRLETEKRLYTMGEPVEFRCILEAQNVPDRYFAVSWAFNSSLI ASMGPNAVPVLNSEFAHREAKGQLKVAKESDSVFVLKIYHLRQEDSGKYNCRVTEREK TVTGEFIDKESKRPKNIPIIVLPITDDWVVKVPQNHQILPQGHLESSVSVEVASNASV VLEGENLHLSCSVRTAGRPQGRFSVIWQLVDRQNRRSNIVWLDRDGTVQPGASYWERS SFGGVQMEQVQPSSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTPIS VTALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFQDL VTFTRDGGVQWGDRSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRN YNSSWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLSLVENRPIQLSCSVRSQTSQNS HFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRARLQFERHVSGGLFSLTV QRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQAQGNLS VLETQQVQLECVVLNRTSAASQLAVEWFVWKPNHPERETVARLSREATFHYGEQAAKN NLKGRLHLESPSSGTYRLFIQNVAVQDSGTYSCHVEEWLPSPRGVWYKRAEDTAGQTA VTVTRPDAALQVDTVVPNATVSERAAFQLDCSVVSRSSQESRFAVAWFSLRTKTGGKR GSPGLEEQEDEDEDEEGEEEEDPTERTVLLSVGPDAVFGPEGRPWEGRLRFQRLSPLL YRLSVLQASPQDTGNYSCRVEEWLPSPQKGWYRLVEEESAPVSIHVLDTSSTLQSVIC SNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSDGKNGVPLLWIKEPHLNYSP TCLEPPVLSIHPGAID" assembly_gap 14893163..14893194 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14952395..14952425 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14964067..14964117 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 14973894..14974858 /estimated_length=965 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15028868..>15262877 /locus_tag="PAL_GLEAN10017454" mRNA join(<15028868..15029183,15033489..15033791, 15037565..15037795,15041751..15041873,15188452..15188813, 15191674..15191869,15196247..15196350,15205900..15205972, 15208010..15208435,15213456..15213875,15225990..15226295, 15227797..15227925,15246220..15246600,15247863..15248279, 15251681..15252067,15255449..15255832,15256527..15256931, 15259441..15259851,15262300..15262695,15262771..>15262877) /locus_tag="PAL_GLEAN10017454" /product="Immunoglobulin superfamily member 2" CDS join(15028868..15029183,15033489..15033791, 15037565..15037795,15041751..15041873,15188452..15188813, 15191674..15191869,15196247..15196350,15205900..15205972, 15208010..15208435,15213456..15213875,15225990..15226295, 15227797..15227925,15246220..15246600,15247863..15248279, 15251681..15252067,15255449..15255832,15256527..15256931, 15259441..15259851,15262300..15262695,15262771..15262877) /locus_tag="PAL_GLEAN10017454" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007155 - cell adhesion [Evidence IEA]" /codon_start=1 /product="Immunoglobulin superfamily member 2" /protein_id="ELK05953.1" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008424" /db_xref="InterPro:IPR013106" /db_xref="InterPro:IPR013285" /db_xref="UniProtKB/Swiss-Prot:Q93033" /translation="MCIWWLMAGGRLRENTSPIAGQWKWLQILMPILMHWSGRDQAGG QRDRAADGHVAQASLKPWHTPFLVRVLRTCLLFHVSRRSLREEXXXXXXDSVIPELRG RSRCTAPKHITILGALDHDIDLNIPSFQMNDAIEHIQWNKNEMRIVQYQQGKIHDEQK ETYQLFLNGTLKIKRLNRSDTGTYKVIIYDKDGKNVLEETFILKVLEKVSTPVISWNC INKTLTCEVTRGTDLKLRLYYNGRSVGEGQKVITHKWNANPNGSFTCTANNTVSEETK TAVIECPGKGLDIILILSICGGGLMFLIFVALLIVYISKRKKQHRRRNALCRGRVVRV PAGSLVRVAGTELVIPCNVSDYDGPSEQNFDWSFSSSGSSFVELASTWEVGFPAQLYR ERLQRGEILLRRTANDAVELHIKNVQPSDQGHYKCSTPSTDATVQGNYEDTVQQRYHS GDVRLDTVGSDGYRLSVSRVLAEDQGTYRCVVSEWIEEQGSWQEIQEKAVDVATVVIQ PTVLRAAVGRNVSVTEGKELDLACNITTDRADDVRPELVVHANVVPQGKGPDIVLETT SGLQPDYQVYLNASKVPECSDDLTELECRIAGRKNAEASVRFTVSWYYRTSQRSDDVA TSELLAVMDGDWTLRYGERSKQRAQDGDFIFSKEHTDTFSFRIQRTTDEDRGDYYCVV SAWTAQRNDSWAKSKDVVSKPVHIFWASEDSVLVVKARQPKPFFAAGNTFEMTCKVSS KNIKSPRYSVLITAEKPVGDLSSPNETKYIISLDQDSVVKLENWTDASRVDGVVLEKV QEDEFRYRMYQTQVSDAGLYRCLVTAWSPVRGSLWREAATSLSNPIEIDFQTSDDMAF DVSWSAVHSFGLDKAPVLLSSLDRKGIVHTAPRDWKSDLSLERVSELEFLLQVHGSED QDFGNYYCSVTPWVKSPTGSWQKEAEIFSKPVFITVKMDVLNAFKYPLLIGAGLSAVI GLLSCLIGYCSSRWCCKKEIQETRPKLSIGQREVTVQKGPLFRAEGYPVSIGCNVTGH KGPSEQHFQWSVYLLTGPTQEVQIISTKDATFSYVMYAPRVRSREIYVERVQGSAVFL HISKLQMKDSGEYECHTPNTDGRYYGNYSAKTTLIVIPDTLSATMNSQTLHKEEGEPL ELTCEAAKATAQHTHLSVTWYLMRDGERSQGIKIISLSKDFMLIPGPSYTERFAAGDV RLDKLRASTFRLTVGSLQPSDQGQLFCEAAEWIQDPDGTWTFITKKQTDQTTLWIQPA GRDFQVNITTESTFTAGKPLELVCLVVGSGRDPQLQGTWFFNGIEMAGIDAGGVLGLK EDYKERAREGQVQVSKLNPKAFSLKIFAAGPEDEGAYRCAVAEVTRTQMGSWQVLQRK QSPDSHVHLRKPAARSVVMSTRNKQQVVWEGEALTLLCKADGAESLLSVNWWHVPQDQ TQPEFVAGMKQDGTVQLSDSYGELNNHGNARLEKTDWGTFQLEIPSTSVTDSGTYECR VSERTRNQAGDLSWTQKIAVTVKSLQSSLQVSLMSRQPQVKLTNTLDLSCIVGADYAD LKVPLTVTWQFQPAGSQAFHQLIRITHHGTIEWGHFPSQFQRKSKVSQSSFRSQLLIH DATEEEAGVYRCKVEVYDRNSLHTDGPMRASAISHPLQIAVTLPESNLKVNSSSQVQE IPINSNTDIECHILSRSTGNIQFAVTWYFSSISTNAPWRKILEMDQTNVVEYGDEFHT PWRKQKFHTERVSQDTFQLHILNAGDSDQGRYRCSVKEWLLATNGAWYQLGEEMSGLT ELKLRPTGSKVRVSRVSWSENATEHGEATIHCSLESPGGSASLFSVTWYRNGENSGSK MLVHLQQDGLLEYGDDRLRSPLHCYRSSPTDFVLKLHRVEMEDAGMYWCKVVEWQLHG TPGKWVSQASDESQHVALTVLPSAMFCSFFRLKTISDALRKRLAICLNSNAFGQTRST " assembly_gap 15029129..15029144 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15039114..15039202 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15050728..15051587 /estimated_length=860 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15052961..15053102 /estimated_length=142 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15059197..15059823 /estimated_length=627 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15098855..15102319 /estimated_length=3465 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15118972..15118986 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15119465..15119483 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15134903..15134930 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15145560..15145573 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15157697..15157713 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15160665..15161273 /estimated_length=609 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15191251..15191651 /estimated_length=401 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15196359..15196383 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15202285..15202436 /estimated_length=152 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15231917..15232255 /estimated_length=339 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15235889..15235979 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15248951..15249448 /estimated_length=498 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15263926..15264317 /estimated_length=392 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15270378..15270400 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15273982..15274027 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15284312..15284340 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15284662..>15320613 /locus_tag="PAL_GLEAN10017455" mRNA join(<15284662..15284689,15284769..15284871, 15294767..15294833,15295711..15296661,15296971..15297085, 15297428..15297640,15299125..15299252,15300540..15300621, 15302832..15302951,15304116..15304266,15305860..15305965, 15307507..15307688,15308414..15308567,15308880..15308971, 15309770..15309852,15310246..15310370,15311369..15311539, 15314084..15314142,15315067..15315217,15315973..15316055, 15318027..15318101,15320469..>15320613) /locus_tag="PAL_GLEAN10017455" /product="Transcription termination factor 2" CDS join(15284662..15284689,15284769..15284871, 15294767..15294833,15295711..15296661,15296971..15297085, 15297428..15297640,15299125..15299252,15300540..15300621, 15302832..15302951,15304116..15304266,15305860..15305965, 15307507..15307688,15308414..15308567,15308880..15308971, 15309770..15309852,15310246..15310370,15311369..15311539, 15314084..15314142,15315067..15315217,15315973..15316055, 15318027..15318101,15320469..15320613) /locus_tag="PAL_GLEAN10017455" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Transcription termination factor 2" /protein_id="ELK05954.1" /db_xref="InterPro:IPR000330" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR010666" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="UniProtKB/Swiss-Prot:Q9UNY4" /translation="MELVRCPEHGTLCFLKTGVRDGPNKGKSFYVCQADTCNFVRATE LFFRCIRSKAKGKRWCGSIPWQDSNSKDQSVTSKSQHTSELFRYPSSQRNPFKVLDKN QEPSLWKQFVKGEEEEKMADKKQREKGDSLLDQKKEKKPGSKCWVEGGLSGPVEKDRQ PAVLQKQRGENTELQREAKETEGTHSTGDREIQSERCQEKELRKPSASLQAKSNGKSD VQDESEPLREKEATPLPQTVHSQNPISQPWEGEHLSKDSPGTRATQKRLLQGRCHVQP EAHDVSALTGSATQAAPPAAGRPLGERREADTSSCDSEEDEVVFVSCQPGSPLLFDTS PDSEKENHKFPSQSVQRTVPPDSGVSGKVEPSDPAAQRVYLTTQLKQKKSTLASVNIQ VLPDKGQKLLKQIQELEEALGTLALSPEQGTNEENNTQVPQQRNFAKPTTNPPHLMPP KPLQGQDLLPLGFRGPKVVAGQYSHCSGGKIQGLGLVVNRYTGPTNQDRLHAGWKVTS EAIDGLHQSLESCPGETAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDM GLGKTLTMIALILTQKNQEEDKEKDKTTALTWLSKDDTTEFISHGTLIICPASLIHHW KKEVEKRVSYNKLRVCLYHGPSRDQRAGVLSTYDIVITTYSLLAKEIPMKKHEGEVAV SNLSEEGISTPLLQIVWARIILDEAHNIKNPRVQTSMAVCKLQARARWAVTGTPIQNN LLDMYSLLKFLRCSPFDDYNLWKSQVDNGSKKGGERLSILTKSLLLRRTKEQLDSAGK PLVILPQRKYQLHHLKLSEDEETVYSVLFARSRSALQSYLNRQESGGNKSGRNSDDPF NRVALEFGSSGPVAAEAPRSSTVHILSQLLRLRQCCCHLSLLKSALDPTELRSQGLLL SLEEQLGALTLSELQNSEPSSTVCLNGECFKVELFEDTRESTKISSLLAELEAIRRNS ASQKSVIVSQWTSMLKVVALHLKRHRLTYATIDGSVNPKQRMDLVEAFNNAGGPQVML ISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVE EKILQLQEKKKDLAKQVLSGSGESVTKLTLADLKVLFGI" assembly_gap 15295519..15295580 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15328829..>15335082) /locus_tag="PAL_GLEAN10017456" mRNA complement(join(<15328829..15328963,15330293..15330419, 15331002..15331131,15332319..15333055, 15334595..>15335082)) /locus_tag="PAL_GLEAN10017456" /product="Tripartite motif-containing protein 45" CDS complement(join(15328829..15328963,15330293..15330419, 15331002..15331131,15332319..15333055,15334595..15335082)) /locus_tag="PAL_GLEAN10017456" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Tripartite motif-containing protein 45" /protein_id="ELK05955.1" /db_xref="InterPro:IPR000315" /db_xref="InterPro:IPR001298" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR003649" /db_xref="InterPro:IPR014756" /db_xref="InterPro:IPR017868" /db_xref="UniProtKB/Swiss-Prot:Q5BIM1" /translation="MSEKRTPLLGFVGKLPSGTALGNSGKTHCPLCMGLFKAPRLLPC LHTVCTTCLEQLEPFSVVDIGGGDSDTSSEGAIFQELKPRSLQPQIGILCPVCDAQVD LPVGGVKALTIDHLAMNDVMLESLRGEGQGLVCDLCSDREVEKRCQTCKANLCHFCCQ AHRRQKKTIHHTMVDLKDLKGYSRIAKAILCPAHPAEELRLFCELCDRPVCRDCVVGE HREHPYDFASNVIHKHGDSVRELLRGTQPHVGALEDALARIRETNSALQERVEAVAAD VRTFSEGYIKAIEEHRDKLLKQLEDIRVQKENSLQLQKAQLEQLLADMRTGVDFTEHL LTSGSDLEILITKXXXXXXXXXXXXXXAYNARPGVSERICFSPQEKAGRCRGYEVYGA IKTKEIDPAKCVLQGEDLHRAREKQTASFTVLCKDAAGESMGRGGDNIQVAVVPKDKK DRSPCSPVRTMVQDNKDGTYYVSYTPKEPGVYTVLVCVKEQHVQDGEDGAESVTRKHR LGLLVGHVAHMPEGQHRLLDSVTACLALSS" assembly_gap 15332461..15332502 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15336205..15336251 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15352796..>15360379) /locus_tag="PAL_GLEAN10017457" mRNA complement(join(<15352796..15352920,15357553..15357831, 15360220..>15360379)) /locus_tag="PAL_GLEAN10017457" /product="V-set domain-containing T-cell activation inhibitor 1" CDS complement(join(15352796..15352920,15357553..15357831, 15360220..15360379)) /locus_tag="PAL_GLEAN10017457" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="V-set domain-containing T-cell activation inhibitor 1" /protein_id="ELK05956.1" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="UniProtKB/Swiss-Prot:Q7Z7D3" /translation="MFRGRTAVFADQVRVGNASLRLKNVRLTDAGTYKCYVLTANGKG NAGLEYKTGAFSIPEMDVDYNASSESFRCEAPRWFPQPTVVWTSQADLRANFSQVSNT SFELNSENVTMKVVSILYNVTINNTYSCMIENDLAKATGDIKVTDSEIKRRSHLELLD SKASLCVSSFFAVSWVLLSLSSYLMLK" assembly_gap 15396496..15396740 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15398817..15398904 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15401299..15401465 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15414409..15414455 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15433564..15434060 /estimated_length=497 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15435994..15436005 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15439649..15439684 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15450657..15450709 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15453564..15454325 /estimated_length=762 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15474115..15474148 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15494295..15494319 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15500161..15501029 /estimated_length=869 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15501575..>15607894 /locus_tag="PAL_GLEAN10017458" mRNA join(<15501575..15501876,15522916..15523171, 15530145..15530241,15541208..15541326,15547218..15547298, 15562452..15562546,15570272..15570395,15571337..15571430, 15587321..15587436,15591194..15591410,15595267..15595439, 15598946..15599061,15607762..>15607894) /locus_tag="PAL_GLEAN10017458" /product="Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB" CDS join(15501575..15501876,15522916..15523171, 15530145..15530241,15541208..15541326,15547218..15547298, 15562452..15562546,15570272..15570395,15571337..15571430, 15587321..15587436,15591194..15591410,15595267..15595439, 15598946..15599061,15607762..15607894) /locus_tag="PAL_GLEAN10017458" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA]; GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB" /protein_id="ELK05957.1" /db_xref="InterPro:IPR001382" /db_xref="UniProtKB/Swiss-Prot:O60476" /translation="MTTPALLPLSGRRIPPLNLGPPSFPHHRATLRLSEKFILLLILS AFITLCFGAFFFLPDSSKHKRFDLGLEDVLIPHVDASKGAKHPGVFLIHGPDEHRHRE EEERLRNKIRADHEKALEEAKEKLKKSREEIRAEIQTEKNKVAQDMKTKEKKPLPPVS IPKLIGISGGDPEDTDIRKKREKIKEMMKYAWDNYRLYGWGHNELRPIAKKGHSTNIF GSSQMGATIVDALDTLYIMGLHDEFRDGQKWIEDNLDFSVNSEVSVFEVNIRFIGGLL AAYYLSEEEIFKIKAVQLAEKLLPAFNTPTGIPWAMVNLKSGVGRNWGWASAGSSILA EFGTLHMEFVHLSYLTGDPIYYKKVMHIRKLLQKMDRPNGLYPNYLNPRTGRWGQYHT SVGGLGDSFYEYLLKAWLMSDKTDHEARRMYDDAIEAIEKHLIKKSRGGLTFIGEWKN GHLEKKMGHLACFAGGMFALGADGSRDKAGHYLELGAEIARTCHESYDRTALKLGPES FKFDGAVEAVAVRQAEKYYILRPEVIETYWYLWRFTHDPRYRQWGWEAALAIEKYCRV SGGFSGVKDVYSSTPAHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNTEAHPLP VLHLANTTLSGNPAVR" assembly_gap 15522299..15522317 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15529797..15529901 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15568265..15568282 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15578535..15582425 /estimated_length=3891 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15600770..15600813 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15612920..15613455 /estimated_length=536 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15623357..15624040 /estimated_length=684 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15668620..15669604 /estimated_length=985 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15674423..15675064 /estimated_length=642 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15684256..>15685431 /locus_tag="PAL_GLEAN10017460" mRNA <15684256..>15685431 /locus_tag="PAL_GLEAN10017460" /product="Protein FAM46C" CDS 15684256..15685431 /locus_tag="PAL_GLEAN10017460" /codon_start=1 /product="Protein FAM46C" /protein_id="ELK05958.1" /db_xref="InterPro:IPR012937" /db_xref="UniProtKB/Swiss-Prot:Q5VWP2" /translation="MAEESSSTRDCVSFSVLNWDQVSRLHEVLTEVVPVHGRGNFPTL EITLKDIVQTVRSRLEEAGIKVQDVRLNGSAAGHVLVKDNGLGCKDLDLIFHVALPTE AEFQLVRDVVLCSLLNFLPEGVNKLKISPVTLKEAYVQKLVKVCTDADRWSLISLSNK NGRNVELKFVDSIRRQFEFSVDSFQIILDSLLFFYDCSSGPLSEHLHPTVIGESVYGD FEEAFDHLQNRLIATKNPEEIRGGGLLKYSNLLVRDFRPTDQEEIKTLERYMCSRFFI DFPDILEQQRKLETYLQNHFAEEERSKYDYLMILRRVVNESTVCLMGHERRQTLNLIS LLALRVLAEQNIIPSATNVTCYYQPAPYVSDGNFNNYYVAQPPVPYSQPYPTWLPCN" assembly_gap 15700317..15700344 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15704846..15704898 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15717345..15717358 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15742673..15744166 /estimated_length=1494 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15759475..15759579 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15761955..15761994 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15767140..15767176 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15786711..15787374 /estimated_length=664 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <15823230..>15894907 /locus_tag="PAL_GLEAN10017463" mRNA join(<15823230..15823415,15868050..15868381, 15871778..15871958,15872906..15873115,15874529..15874647, 15876201..15876279,15877121..15877216,15878135..15878248, 15878458..15878559,15878994..15879091,15879973..15880080, 15880613..15880843,15883164..15883257,15885135..15885236, 15886589..15886674,15886847..15886982,15887656..15887712, 15888715..15888815,15889035..15889146,15889288..15889422, 15889697..15889747,15890288..15890353,15890816..15890908, 15891389..15891436,15892101..15892144,15892964..15893092, 15894374..15894467,15894752..>15894907) /locus_tag="PAL_GLEAN10017463" /product="WD repeat-containing protein 3" CDS join(15823230..15823415,15868050..15868381, 15871778..15871958,15872906..15873115,15874529..15874647, 15876201..15876279,15877121..15877216,15878135..15878248, 15878458..15878559,15878994..15879091,15879973..15880080, 15880613..15880843,15883164..15883257,15885135..15885236, 15886589..15886674,15886847..15886982,15887656..15887712, 15888715..15888815,15889035..15889146,15889288..15889422, 15889697..15889747,15890288..15890353,15890816..15890908, 15891389..15891436,15892101..15892144,15892964..15893092, 15894374..15894467,15894752..15894907) /locus_tag="PAL_GLEAN10017463" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="WD repeat-containing protein 3" /protein_id="ELK05959.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR007148" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="InterPro:IPR020472" /db_xref="UniProtKB/Swiss-Prot:Q9UNX4" /translation="MPRVLTSLSPPSLLAALAAPTPAPRLFAWLAVLQNSDQNSPQRA SSPVFPLPKAGQGASLCSRSGGPIRAAGGAAEAPRGKRPSGIPGQPSRGLGAYGEAKS HRAEATSCNSSPRRNADFRSRPALANQTPVLTSLPPGRRRKRRAEEGPGADPEGVGPV GGSKRPRTSWGPRPCNMGLTKQYLRYVASAVFGLIGSQKANIVFVTLRGEKGRYVAVP ACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSVRIFSLLSGEGN VTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFL REKNLLVSSGKDTVVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELR AWDIAYLQEIEDLEEPEAKKIKASSPGTQDTHRAEVDPLEMDEAPEDRILTCKKAGSI MREGRDRVVSLAVDRTGRILACHGTDSVLEVFCILSKEEIQKKMDKKMKKARKKAKLN SCQGEEEGLEVTVEMTLQDEIQRVTNIKTSAKIKSFDLIHSPHGEVKAVFLLQNNMVE LYSLSPSTPTPQPVRTSRITLGGHRSDVRTLSFSSDNIAVLSAAADSVKIWNRSTLQC IRTMTCDYALCSFFVPGDRQVVIGTKTGKLQLYDLASGSLLEAIDAHDGALWSMSLSP DQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVNYSPNQKLL AVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDF GDCHKSLFAHDDSVMHLKFVPKSHLFFTAGKDRKIKQWDADRFEHVQTLEGHHQEIWC LAVSPNGDYVVSSSHDKSLRLWERTREPLILEEEREMQREAEYEESVAKEDQPAVPGE VQGENYFTGKKTIETVKAAERIMEAIELYREETAKMKEHKAICKAAGTEVPLPTNPIL LAYGSISPSAYVLEIFKGIKSSELEESLLVLPFSYVPDILKLSNEFMQLGSDVELLCR CLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVSQVRDVIGFNMAGLDYLKRECEAK SEVMFFAEATSQLEEKKRKRKKREKLILTLT" assembly_gap 15828453..15828509 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15861513..15867976 /estimated_length=6464 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<15902427..>16068686) /locus_tag="PAL_GLEAN10017464" mRNA complement(join(<15902427..15902582,15904862..15904922, 15905135..15905245,15906685..15906869,15908143..15908279, 15911025..15911156,15912850..15912952,15919011..15919124, 15920046..15920228,15921976..15922103,15923767..15923897, 15924002..15924147,15925313..15925501,15927566..15927720, 15928910..15929054,15933268..15933485,15937583..15937742, 15939496..15939674,15942229..15942349,15944309..15944484, 15946864..15946977,15948167..15948325,15950406..15950517, 15951529..15951768,15955897..15955994,15957550..15957731, 15963469..15963623,15964151..15964256,15969163..15969317, 15969895..15969956,15975918..15976457,15977822..15977972, 15978567..15978680,15978771..15978908,15983572..15983684, 15983880..15983964,15985114..15985275,15989288..15989469, 15991384..15991578,15992948..15993134,16001728..16001859, 16030228..16030311,16030917..16031057, 16068621..>16068686)) /locus_tag="PAL_GLEAN10017464" /product="Sperm-associated antigen 17" CDS complement(join(15902427..15902582,15904862..15904922, 15905135..15905245,15906685..15906869,15908143..15908279, 15911025..15911156,15912850..15912952,15919011..15919124, 15920046..15920228,15921976..15922103,15923767..15923897, 15924002..15924147,15925313..15925501,15927566..15927720, 15928910..15929054,15933268..15933485,15937583..15937742, 15939496..15939674,15942229..15942349,15944309..15944484, 15946864..15946977,15948167..15948325,15950406..15950517, 15951529..15951768,15955897..15955994,15957550..15957731, 15963469..15963623,15964151..15964256,15969163..15969317, 15969895..15969956,15975918..15976457,15977822..15977972, 15978567..15978680,15978771..15978908,15983572..15983684, 15983880..15983964,15985114..15985275,15989288..15989469, 15991384..15991578,15992948..15993134,16001728..16001859, 16030228..16030311,16030917..16031057,16068621..16068686)) /locus_tag="PAL_GLEAN10017464" /codon_start=1 /product="Sperm-associated antigen 17" /protein_id="ELK05960.1" /db_xref="UniProtKB/Swiss-Prot:Q6Q759" /translation="MSLPTDMPAYHSRFQGCVFQSVNDWKGYVAFVVGNQIEDTVLIQ ALTLAVQAPQRKLFSVISWQDILQQINEANAVFGTTSKKAKKPQAGNVPLYYEVLLAA KAIMDSGEKLSLPLIGKLLKFQLLQIKSKDQQRRENEKKVIEDRFKIEKDKGKAKSPK EKKAANAKAAKGKGKDQPEANTAVKKTTELKRRGEEGDSGLYIDDEPDDGAQHYIIAV GFHSPQLLAILTELGLPVSSVIKISSENYEPLQTHLAAVSQQQEVFLQPEDIEAEKLK KENTIKELAIFWKYLEPILNNEKPETNLFDVARLEYMVKANSFPSDWSDSEMMLKLGT DIFEDIACLMYDSLDWKRQHQHYLESMQLINVPQVVSEKPTVEATLISEPPQSVVPVP GKKKGPSEEPQAPPGTYETLAFVVTTEVDMRYYNDLLNPFPEEFVSVPLILHCMLEQV VATEEDLVPPSLVELLPRADGLDHRIAAHIVSILPSLCLTDREKKNLHELFLSEEEKE SKAMPKGPLLVNYHDTLTHRKYALKDQKNFDPVQIEQEMQSRLPLWELLEFPLPPPWN HTKRLATIHELMHFCTNEALSWNEVERAFKVFTFESLKLSEVDEEGTLKSCKMMYGTD PEMFNIPWDNPARFAKQIRQQYITKMNNEKAKHQTGTPHGGNKRHSWRFTVVDFSSIV AHRFSLHQLDIETKVKVLLTDQNWATSVQGDENNKEPSDHSQPNADNMEHLNPNNEKP LDPDNRGLSEETSLKTPLQPEPLEQTTGNEIKDEAVTEADPLEKKPKKMTVEAELEDI KKTQQRSLTDWSFTEHFKPKVLLQVALGCELEGSGVSRKQDNELPMMPLSVAVTACCG QNALEKARVRSHVETVLQEANQQYKCIDSYYHTQDNSLLLVFHNPMNSQRLHCEYWNI ALHSNVGFRNYLELVTKSIQDWIIKEEAIYQESKMAEEIAKTKAELELKYAATAKIVS SSKIFSVKKSKSNKGMSKTEIADAEKEKEKEKEKIPFILEGSLKAWKEEQDRLAEEER LKEEKKAEKKSKEGGKKKGRENIDKAEIKTMKKKSVSKEKLKEEQAKIPEEPAELIRQ PEPKRVCPFLGYNMGNIPIQISGTNCYLYPSDGGQIEVEKTTFEKGSTFIKMKVKKDK HNFIIHLKDPKEIVKRENKEESYSSEDEKEESPEEQSLAKGITNPKNKAVSKFGSFSA TLENGICLSISYYGSSGMAPEDNDPDLEAMLTIPSALTPTVIPVIVPVPQAKGKGKTK GKEKPKESIKEEEHPKEEEKKEEVVLEEPVLEETVYVPTFQNLNVSCPSGLLVTFIGQ ESTDKYVMDEVPTWDIMVRQSYPQKVKHYEFYRTLMPPVEQEASRVVTSQGTVIKYML DGSAQILFADGTVSSSRNSGPVCPPAEMPLSPHSADMMDSVSQQKSETAPSETVITKK GRSHKNQLSVPHKNEIHEPPPEIVQTVSPVEGHVGTWFTTTPEGNRIGTKGSERIADL APLLSFQAKDPISGTVMTTREDKVVIVETRDGTRIVDHADGTRITTFYQVYEDHIVPP DDQEISEDLRTVTRQVKCMRVENSHYATVITNCEDSSCCATFGDGTSVIAKPQGTYQV LPPNTGCLHIDRDCSAIYCHESSSDVYQPSQEREQLRASRYIMKHTSEVICEVLDPEG NIFQVMADGSTSTLLPEDNSEDDLNTEPEGYDSLSSTHLHKNHLQIYGEHVPRFFVIY ADGSGVELLRDSDIEEFLSLAYGESTAVVLQEPVQEQPGALSITVLRPFHEASPWLMK KELDTIIPHNLQSRSWETFPSIEKKTPGPPFGTQNWKGLLTGIRQLVNPPAPVLNCPD VLQMRQFVQHEVMKKDVKLKLQISLKDYINHILKKEDELQEMTVKDSRTEEERGNAAD LLKLVMFSYLDTLSKNLPPFTKKDDDGKKTAVQNAYSLHPDSKPNKLLEQESKDMLSL PKAEHVEDIKESANQNQTENITESTAEPEPCVPIKIPTQSLLQDVAGQARKERVRLPH YLLSSKPKSHPLTKVQDSVGGRVKTSSVASAAMNNVNSSPFGFHLLPPSVKFGVLKEG QTYAATVKLRNVGVDFCSSMSWQSARVFALAATLQCTHPPDVPGTAQARAAHRTRFRV KQPPPSTGLKVTYKPGPVAAGLQVDLKVELFAMAVGEDSAKGSVHISHNIEIMTEHDV LFLPVEANIL" assembly_gap 15906992..15907012 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15918491..15918508 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15939253..15939276 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15946077..15946099 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 15988886..15988914 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16003316..16003358 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16016509..16018209 /estimated_length=1701 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16025406..16025615 /estimated_length=210 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16034732..16034791 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16039209..16039476 /estimated_length=268 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16044143..16044475 /estimated_length=333 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16075957..16075988 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16114046..16114060 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16116243..16116478 /estimated_length=236 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16135234..16135269 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16195280..16195407 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16215583..16215740 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16234445..16234528 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16237697..16237712 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16242279..16242299 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16261570..16261600 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16265509..16265527 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16271415..16271451 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16295487..16295539 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16337637..16337697 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16357756..16357813 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16388102..16388162 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<16439215..>16540136) /locus_tag="PAL_GLEAN10017466" mRNA complement(join(<16439215..16439999,16450467..16450564, 16464599..16464663,16475976..16476143,16477209..16477380, 16478970..16479071,16483530..16483743, 16539932..>16540136)) /locus_tag="PAL_GLEAN10017466" /product="T-box transcription factor TBX15" CDS complement(join(16439215..16439999,16450467..16450564, 16464599..16464663,16475976..16476143,16477209..16477380, 16478970..16479071,16483530..16483743,16539932..16540136)) /locus_tag="PAL_GLEAN10017466" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="T-box transcription factor TBX15" /protein_id="ELK05961.1" /db_xref="InterPro:IPR001699" /db_xref="InterPro:IPR008967" /db_xref="UniProtKB/Swiss-Prot:Q96SF7" /translation="MSERRRSAVALSSRAHAFSVEALIGSNKKRKLRDWEEKGLDLSM EALSPAGPLGDSQDAAAHGLEPHPDSEPSTGSDSEVLPERTSCSFDAHGDLGPGAAGA VPAAMSSMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYY IAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDK LKLTNNELDDQGHIILHSMHKYQPRVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPETV FTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRTGLEAIMESYAFWRPPVRTLTFEDF TTMQKQQGGSTGTSPTTSSTGTPSPSASSHLLSPSCSPPTFHLAPNTFNVGCRESQLC NLNLSDYPPCARSNMAALQSYPGLSDSGYNRLQSGTASATQPSETFMPQRTPSLISGI PTPPSLPSNSKMEAYGGQLGSFPTSQFQYVMQAGNAASTSSSPHMFGGSHMQQSSYNA FSLHNPYNLYGYNFPTSPRLAASPEKLSASQSTLLCSSPSNGAFGERQYLPAGMEHSM HVISPSPSNQQATNTCDGRQYAAVPGSSSQMSVHMV" assembly_gap 16469545..16469566 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16502129..16502156 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16515414..16515427 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16518653..16518662 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16527908..16531549 /estimated_length=3642 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16532574..16532690 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16547247..16547262 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16557714..16558075 /estimated_length=362 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<16575214..>16575657) /locus_tag="PAL_GLEAN10017469" mRNA complement(<16575214..>16575657) /locus_tag="PAL_GLEAN10017469" /product="Tryptophanyl-tRNA synthetase, mitochondrial" CDS complement(16575214..16575657) /locus_tag="PAL_GLEAN10017469" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]" /codon_start=1 /product="Tryptophanyl-tRNA synthetase, mitochondrial" /protein_id="ELK05962.1" /db_xref="InterPro:IPR002305" /db_xref="UniProtKB/Swiss-Prot:Q3T099" /translation="MKKVKSLRDPSAKMSKSDPDKLATVRITDSPEEIVQKFRKAVTD FTSEVTYEPASRAGVANMVAIHSAVTGLPVAEVVRRSAGIDTARYKLVVADAVIEKFA PIKSEIEKLKLDREHLEKVLQVGSAKAKDIAYPVCQEVKKLVGFL" gene complement(<16577244..>16703561) /locus_tag="PAL_GLEAN10017470" mRNA complement(join(<16577244..16577370,16588044..16588129, 16590982..16591062,16606999..16607256, 16703502..>16703561)) /locus_tag="PAL_GLEAN10017470" /product="Tryptophanyl-tRNA synthetase, mitochondrial" CDS complement(join(16577244..16577370,16588044..16588129, 16590982..16591062,16606999..16607256,16703502..16703561)) /locus_tag="PAL_GLEAN10017470" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO_function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]" /codon_start=1 /product="Tryptophanyl-tRNA synthetase, mitochondrial" /protein_id="ELK05963.1" /db_xref="InterPro:IPR002305" /db_xref="InterPro:IPR002306" /db_xref="UniProtKB/Swiss-Prot:Q3T099" /translation="MKDLRYQPQSEFYLRGANGRKDAVKRIFSGIQPTGIPHLGNYLG AIESWVRLQDEHDSVLYSIADLHSVTVPQDPAVLRQSILDMTAALLACGINPEKSILF QQSQVSEHTQLSWILTCMVRLPRLQHLHQWKAKTAKQKHDGTVGLLTYPVLQAADVLL YKSTHVPVGEDQAQHLELVQDLARGFNKKYGAFFPLPAPLLSK" assembly_gap 16616960..16616973 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16623124..16623825 /estimated_length=702 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16695729..16695739 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16700010..16700034 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16745154..16745274 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16766931..16767069 /estimated_length=139 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16773008..16773233 /estimated_length=226 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16779183..16779207 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <16798340..>16809262 /locus_tag="PAL_GLEAN10017471" mRNA join(<16798340..16798482,16799969..16800222, 16801910..16802193,16803517..16803726,16806679..16806837, 16807119..16807251,16809207..>16809262) /locus_tag="PAL_GLEAN10017471" /product="Hydroxyacid oxidase 2" CDS join(16798340..16798482,16799969..16800222, 16801910..16802193,16803517..16803726,16806679..16806837, 16807119..16807251,16809207..16809262) /locus_tag="PAL_GLEAN10017471" /note="GO_function: GO:0010181 - FMN binding [Evidence IEA]; GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Hydroxyacid oxidase 2" /protein_id="ELK05964.1" /db_xref="InterPro:IPR000262" /db_xref="InterPro:IPR012133" /db_xref="UniProtKB/Swiss-Prot:Q9NYQ3" /translation="MPMVCVTDFEAQARERLCKSTWDYIEGGADDDFTRDDNVAAFKK SGLPRTRRHQQPAGPGSRQHRHAGRQSHQRKTSVIWRRFRLRPRYLRDVSQVDTRTTV QGQEISAPICVSPTGFHCLAWPDGEMSTARAAQAAGICYITSTYASCTLEDIVAAAPR GLRWFQLYVQTDRQLTQQLIQRAESLGFKALVITVDAPKTGNRRQNIRNQLDLKKMLM LKDLRSPKEGNSAPRLQMSLIDSSFCWNDLSWIQSITRLPIILKGILTKEDAELALQH KVDGIIVSNHGGRQLDGVPASVDALPEVVAAVKGSMEVYMDGGIRTGNDVLKALALGA KCVFLGRPILWGLAYKHTPDCSFTLLFVSPPPLSCEQGEHGVEEVLNMLKDEFHTSMA LSGCRSVAEISQDLVQVSRL" assembly_gap 16801448..16801521 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <16818106..>16825476 /locus_tag="PAL_GLEAN10017472" mRNA join(<16818106..16818256,16822202..16822366, 16824665..>16825476) /locus_tag="PAL_GLEAN10017472" /product="3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase" CDS join(<16818106..16818256,16822202..16822366, 16824665..16825476) /locus_tag="PAL_GLEAN10017472" /note="GO_function: GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO_process: GO:0006694 - steroid biosynthetic process [Evidence IEA]" /codon_start=1 /product="3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase" /protein_id="ELK05965.1" /db_xref="InterPro:IPR002225" /db_xref="UniProtKB/Swiss-Prot:Q5IFP1" /translation="LAMAGWSCLVTGAGGFLGQRIVHFLVEEKELQEIRALDKAFRPE VKEEFSKLQSKIRLTLLEGDILDEECVRRACQGMSAVIHTACIIDVYNDIPQETVMRV NLKGTEMLLDACAQASVPIFIYTSTIKVAGPNSYRKAMHNVSEEEHYETVWSAPYPLS KKLAEKATLKADGWTLQNGGTLHTCALRPTYIYGEGSLYLYHFISQALKNNGILPCNS KLSFVNPVYVGNVAWAHILALRGLRDPKKAPNIRGQFYYIADDTPHQSYDNLNYALSK ELGFCLDSRVSLPLFLQYWHAFLLELVSLLLRPVCRYQPPFTRHLLTTLNSVYTFSYK KAQRDLGYEPLFSWEKAKQKTMEWISSLVRQHKETLKTKTH" assembly_gap 16819327..16819373 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16828149..16828411 /estimated_length=263 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16830980..16831020 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16840090..16840294 /estimated_length=205 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<16840824..>16843843) /locus_tag="PAL_GLEAN10017473" mRNA complement(join(<16840824..16842211,16843609..>16843843)) /locus_tag="PAL_GLEAN10017473" /product="Zinc finger protein 697" CDS complement(join(16840824..16842211,16843609..16843843)) /locus_tag="PAL_GLEAN10017473" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 697" /protein_id="ELK05966.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q5TEC3" /translation="MEQDDKQGVCEAPDSEDKGMGSDFENSEDRGGDREDSSDAQDVG KRGGHPEEDMGSNPQDGTPRGASEERELVSDFCTEGLLSEEEGVALREEEDDQSAICE VAMFPGLCESDSRSGSAGENRLQEEEEEEEPPPLPVLPWRRHLSLGGXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXFVRRSHLANHQRIHTGEKPHGCGDCGKRFSWRSDLV KHQRVHTGEKPYMCSECGEAFSVSSHLFTHKRTHSGERPYVCRECGKRFGRNSHLVNH LRVHTGEKPFRCGQCEKRFSDFSTLTQHQRTHTGEKPYTCLECGKSFIQSSHLIRHRR IHTGNKPHKCAGCGKGFRYKTHLAQHQKLHLC" assembly_gap 16841379..16841999 /estimated_length=621 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16854704..16854856 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16862286..16862618 /estimated_length=333 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16862831..16863312 /estimated_length=482 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16865519..16865754 /estimated_length=236 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16877606..16877693 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <16892439..>16915938 /locus_tag="PAL_GLEAN10017474" mRNA join(<16892439..16892576,16898034..16898185, 16900017..16900082,16901210..16901264,16901356..16901454, 16909381..16909617,16910121..16910153,16911534..16911686, 16912545..16912677,16913815..16913945,16914727..16914964, 16915784..>16915938) /locus_tag="PAL_GLEAN10017474" /product="D-3-phosphoglycerate dehydrogenase" CDS join(16892439..16892576,16898034..16898185, 16900017..16900082,16901210..16901264,16901356..16901454, 16909381..16909617,16910121..16910153,16911534..16911686, 16912545..16912677,16913815..16913945,16914727..16914964, 16915784..16915938) /locus_tag="PAL_GLEAN10017474" /note="GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_function: GO:0048037 - cofactor binding [Evidence IEA]; GO_function: GO:0051287 - NAD or NADH binding [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="ELK05967.1" /db_xref="InterPro:IPR006139" /db_xref="InterPro:IPR006140" /db_xref="UniProtKB/Swiss-Prot:O08651" /translation="MAFANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAE LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGN SLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFVGTELSGKTLGILGLGRIGREV AARMQSFGMKTVGYDPIISPEVSASFGVEQLPLEEIWPLCDFITVHTPLLPSTTGRCV PTSWVGCRSHRPVDGGAPILGPPQMLVTSSKCAGAALDVFTEEPPRDRALVDHENVIS CPHLGASTKEAQSRCGEEIAVQFVDMMKGKSLAGVVNAQALTSAFSPHTKPWIGLAEA LGTLMRAWAGSPKGTIQVVTQGTALKNAGNCLSPAVIVGLLKHASSPADVNLVNAKLL VKEAGLNVTASHNPAVPGEQACGEGLLTVALAGAPYQAVGLVQGTTPVLQALNSAVFR PEVPLRRGLPLLLFRAQPSNPEMLPTMIGLLAEAGVQLLSYQTSVVSDEETWHVMGIS SLLPSLEAWKQHVTEAFQFHF" assembly_gap 16909968..16910097 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16914080..16914116 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16920232..16920248 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16924359..16924368 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16930602..16930641 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<16931139..>16937369) /locus_tag="PAL_GLEAN10017475" mRNA complement(join(<16931139..16931206,16932611..16932716, 16934306..16934443,16935677..16935774, 16937303..>16937369)) /locus_tag="PAL_GLEAN10017475" /product="Regenerating islet-derived protein 4" CDS complement(join(16931139..16931206,16932611..16932716, 16934306..16934443,16935677..16935774,16937303..16937369)) /locus_tag="PAL_GLEAN10017475" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Regenerating islet-derived protein 4" /protein_id="ELK05968.1" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR003990" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:Q9BYZ8" /translation="MAFESVRLLFLLSFAVGTEVLADIIMRPSCATGWFYYKPNCYGY FRKLRSWSDAELECQSFGNGAHLASVSSAKEARVIAGYIRGYQRTKPVWIGLHDPQKK QQWEWIDGTTYLYRTWSGASVAGDQQCAGISAKNDFLSWNSGRCNRRQHFLCKYRP" assembly_gap 16931666..16931700 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16944056..16944235 /estimated_length=180 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16951625..16955376 /estimated_length=3752 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16955837..16955861 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<16962796..>16963404) /locus_tag="PAL_GLEAN10017476" mRNA complement(<16962796..>16963404) /locus_tag="PAL_GLEAN10017476" /product="Neurogenic locus notch like protein 2" CDS complement(16962796..16963404) /locus_tag="PAL_GLEAN10017476" /codon_start=1 /product="Neurogenic locus notch like protein 2" /protein_id="ELK05969.1" /db_xref="UniProtKB/Swiss-Prot:Q04721" /translation="MVLAPAEGAPAGIAPQSRLPEGKHVAAPREPLPPIVTFQLIPKG SITPPAGTAQPQASCPPAVAGSLPAMYQIPEMARLPSMAFPAAMMPQQDGQVPQTILP TYHPFPASVGKYPTPPSQHSYASSSAAERTPSHSGHLQGEHPYLTPSPESPDQWSSSS PHSASDWSDVTTSPTPGGAGGGQRGPGTHMSEPPPSNMQVYA" gene complement(<16963430..>17082606) /locus_tag="PAL_GLEAN10017477" mRNA complement(join(<16963430..16964173,16965062..16965159, 16965786..16965933,16966665..16966966,16967600..16967768, 16969172..16969268,16969682..16969892,16970077..16970219, 16970787..16971134,16972489..16972994,16973910..16974022, 16976285..16976521,16980719..16980851,16982450..16982595, 16983587..16983740,16985158..16985359,16986055..16986283, 16989118..16989270,16989613..16989732,16992109..16992222, 16993959..16994104,16995413..16995605,17005796..17005906, 17009632..17009865,17011172..17011285,17012103..17012216, 17013105..17013293,17013699..17013854,17015146..17015379, 17031886..17032008,17040545..17040880,17043886..17044145, 17066644..17066725,17082552..>17082606)) /locus_tag="PAL_GLEAN10017477" /product="Neurogenic locus notch like protein 2" CDS complement(join(16963430..16964173,16965062..16965159, 16965786..16965933,16966665..16966966,16967600..16967768, 16969172..16969268,16969682..16969892,16970077..16970219, 16970787..16971134,16972489..16972994,16973910..16974022, 16976285..16976521,16980719..16980851,16982450..16982595, 16983587..16983740,16985158..16985359,16986055..16986283, 16989118..16989270,16989613..16989732,16992109..16992222, 16993959..16994104,16995413..16995605,17005796..17005906, 17009632..17009865,17011172..17011285,17012103..17012216, 17013105..17013293,17013699..17013854,17015146..17015379, 17031886..17032008,17040545..17040880,17043886..17044145, 17066644..17066725,17082552..17082606)) /locus_tag="PAL_GLEAN10017477" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007219 - Notch signaling pathway [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]; GO_process: GO:0030154 - cell differentiation [Evidence IEA]" /codon_start=1 /product="Neurogenic locus notch like protein 2" /protein_id="ELK05970.1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR000800" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR010660" /db_xref="InterPro:IPR011656" /db_xref="InterPro:IPR013091" /db_xref="InterPro:IPR013111" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR022336" /db_xref="UniProtKB/Swiss-Prot:Q04721" /translation="MSFERVGDSPQVVLLVDLALQCRDGYEPCVNEGICVTYHNGTGY CKCPEGFVGEYCQHRDPCERNRCQHGGTCVAQALLGKATCQCAPGFTGEDCQHSTAHP CYASPSCQNGGTCRVLSREDYACTCPVGFTGKLCEWTDACLSHPCANGSTCTTVANQF SCRCLAGFTGQKCEADVNECDVPGQCQHGGTCVNLPGSYQCQCPPGFTGQHCESLYVP CAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTY NCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGGDCSENID DCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQ YICTCPQGYKGADCTEDVDECTMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMD VNECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEIDECQSNPCVNSGQCVDRVN RFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGALCEENID NCDPDPCHHGQCQDGIDSYTCVCNPGYMGAICSDQIDECHSGPCLNEGRCIDLVNGYQ CNCPPGTSGVNCEINFDDCASNPCVHGVCVDGVNRYSCVCSPGFTGQRCNIDIDECAS NPCRKGATCINDVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCD AGWVGINCEVDRNECLSNPCQNGGTCDNLVNGYRCACKAGFKGYNCQVNINECASNPC LNQGTCFDDISGYTCHCALPYTGRNCQTVLAPCTPNPCENAAVCKEAPNFESYTCLCA PGWQGQRCTIDIDECVSKPCMNHGLCHNTQGSYVCECPPGFSGLDCEEDIDDCLANPC QNGGSCADGVNAFSCLCLPGFTGDKCQTDMNECLSEPCRNGGTCSDYVNSYTCKCQAG FEGVHCENNIDECTESSCFNGGTCVDGVNSFSCLCPVGFTGPFCLHEINECSSHPCLN EGVCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCIQEKAESWCLCPSGWA GAYCDVPNVSCEVAASRRXINAGNSHHCQCPAGYTGSYCEQQLDECSSNPCQHGATCS DFVGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCE ENIDDCAKGPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGDINECLSSPCSSDGSLDC VQLVNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSG ARCQSSCGQVKCRRGERCVHTASGPRCFCPSPQDCAPGCASSPCQHGGTCSPQRQPPY YSCRCPPLFRGSRCELYTAPTSTPAATCLSQYCADKARDGVCDEACNSHACQWDGGDC SLTMENPWANCSSLLPCWDYINNQCDELCNTAECLFDNFECQGSSKTCKYDKYCADHF KDNHCDQGCNSEECGWDGLDCAADQPENLAEGTLVIVVLLPPEQLLQDARSFLRALGT LLHTNLRIKRDAQGDLMVYPYYGERSAAMKKQRMTRRSLPDDDEQEVDGSKVFLEIDN RQCVQDSDQCFKNTDAAAALLASHAIQGTLSYPLVSVVSESLPPRPTQLLYLLAVAVV IILFILLLGVIMAKRKRKHGSLWLPEGFTLRRDSSNHKRREPVGQDAVGLKNLSVQVS EANLIGSGTSEHWVDDEGPQAKKAKAEDEALLSEEDDPIDRRPWTQQHLEAADIRRTP SLALTPPQAEQEVDVLDVNVRGPDGCTPLMLASLRGGSSDVSDEDEDAEDSSANIITD LVYQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADANAQDNMGRCPLHAAVA ADAQGVFQILIRNRVTDLDARMNDGTTPLILAARLAVEGMVAELISCQADVNAVDDHG KSALHWAAAVNNVEATLLLLKNGANRDMQDNKEETPLFLAAREGSYEAAKILLDHFAN RDITDHMDRLPRDVARDRMHHDIVRLLDEHNVTPSPPGTVLTSALSPVICGPNRPFLS LKHTPMGKKPRRPNAKNAMPASLPNLAKEAKEAKGSRRKKSLSDKGQLSESSVTLSPV DSLESPHTYVSDTTSSPMITSPGLLQASPSPLLAAAAPPGPVHAQHALSFSGLHEIQP LAHGAGTTLPSVSQLLSHHHMVPPGSGAAGSMGRLHPVPAPGAHGDE" assembly_gap 16972270..16972281 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16982595..16982625 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16991103..16991144 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 16997799..16997904 /estimated_length=106 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17049289..17049328 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17052440..17052651 /estimated_length=212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17072043..17072097 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17086872..17086887 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17102526..17103152 /estimated_length=627 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17109301..17109325 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17121052..17121079 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17134460..17134469 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17163935..17163990 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17164771..17164782 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17174427..>17188820) /locus_tag="PAL_GLEAN10017480" mRNA complement(join(<17174427..17174581,17178156..17178302, 17180462..17180622,17183210..17183319, 17188746..>17188820)) /locus_tag="PAL_GLEAN10017480" /product="Vesicle-trafficking protein SEC22b" CDS complement(join(17174427..17174581,17178156..17178302, 17180462..17180622,17183210..17183319,17188746..17188820)) /locus_tag="PAL_GLEAN10017480" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="Vesicle-trafficking protein SEC22b" /protein_id="ELK05971.1" /db_xref="InterPro:IPR001388" /db_xref="InterPro:IPR010908" /db_xref="InterPro:IPR011012" /db_xref="UniProtKB/Swiss-Prot:Q4KM74" /translation="MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKL NEQSPTRCTLEAGPMAFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKK VPTVSRPYSFIEFDTYIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRG EALSALDSKANNLSSLSKKYRQDAKYLNMRSTYAKLAAVAVFFIMLIVYVRFWWL" assembly_gap 17179068..17179087 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17180023..17180172 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17199270..>17236941 /locus_tag="PAL_GLEAN10017481" mRNA join(<17199270..17199454,17231052..17231107, 17236544..>17236941) /locus_tag="PAL_GLEAN10017481" /product="hypothetical protein" CDS join(17199270..17199454,17231052..17231107, 17236544..17236941) /locus_tag="PAL_GLEAN10017481" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05972.1" /translation="MQRTDGGSCCRAPRRAHHAPFWSGDAARAPQSLPPSLGGEGRCP EPAGSWAAAAAATAPWMRDYFAEDDGEMIPRTSQAAAFLSDTKDRGPPAQPQTWRSAE KFPFGQTHYLKAFEKPPQVRTQALRDFEKVSNMGGLLLSQVEGLPRESDVLHKYHPRL SPDCGHAYLHGVPFKSIRPDKPLDGKLRAECRGVWAIASASAPPSHFYPCCF" assembly_gap 17217704..17217748 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17232442..17233898 /estimated_length=1457 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17241308..17242825 /estimated_length=1518 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17253803..17253958 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17255777..>17298399 /locus_tag="PAL_GLEAN10017482" mRNA join(<17255777..17255917,17280784..17280860, 17283531..17283654,17283875..17284050,17287252..17287369, 17298220..>17298399) /locus_tag="PAL_GLEAN10017482" /product="Myomegalin" CDS join(17255777..17255917,17280784..17280860, 17283531..17283654,17283875..17284050,17287252..17287369, 17298220..17298399) /locus_tag="PAL_GLEAN10017482" /codon_start=1 /product="Myomegalin" /protein_id="ELK05973.1" /db_xref="InterPro:IPR012943" /db_xref="UniProtKB/Swiss-Prot:Q5VU43" /translation="MSNGYRTLSQHLNDLKKENFSLKLRIYFLEERMQQKYEASREDI YKRNIELKVEVESLKRELQDKKQHLDKTGADAETLNSQNEAELRRQFEERQQETEHVY ELLENKIQLLQEESRLAKNEAPWMAALAEAEKECNLELSEKLKGDTKGGADAAGDRVR PDPYTEALAQRDGRIEELSQSLATQEKLVEQLSQEKQQLLHLLEGPTSMEVQSGVCMP LKAQKTLYMDVHTWRPPGQSIFPCLSVHPKFDTQGRVTYNCVVLNETGRQLKQ" assembly_gap 17273927..17273975 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17279394..17279586 /estimated_length=193 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17280988..17281017 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17283409..17283452 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17299795..>17323089 /locus_tag="PAL_GLEAN10017483" mRNA join(<17299795..17300919,17307365..17307496, 17308206..17308325,17308552..17308644,17308776..17308988, 17309858..17310016,17310909..17311022,17311199..17311336, 17312051..17312241,17313136..17313322,17315770..17315937, 17316101..17316182,17317487..17317578,17320383..17320499, 17320817..17320954,17321748..17321860,17322915..>17323089) /locus_tag="PAL_GLEAN10017483" /product="Myomegalin" CDS join(17299795..17300919,17307365..17307496, 17308206..17308325,17308552..17308644,17308776..17308988, 17309858..17310016,17310909..17311022,17311199..17311336, 17312051..17312241,17313136..17313322,17315770..17315937, 17316101..17316182,17317487..17317578,17320383..17320499, 17320817..17320954,17321748..17321860,17322915..17323089) /locus_tag="PAL_GLEAN10017483" /codon_start=1 /product="Myomegalin" /protein_id="ELK05974.1" /db_xref="UniProtKB/Swiss-Prot:Q5VU43" /translation="MKEICRICARELCGNQRRWIFHTASKLNLQVLLSHVLGKDVSRD GKAEFACSKCAFMLDRIYRFDTVIARIEALSIERLQKLLLEKDRLKFCIASMYRKNND DSGAETKAGNGTVDISGLPDVRYSALLQEDFAYSGFECWVENEDQIQELHSCHASEGP GTRPRRCRGCAALRVADSDYEAICKVPRKVARSISCGPSSRWSTSICTEEPALSEVGP PDLPNTKVPPDGESMEEGTPGSSVESLDASVQASPPQQKDEDTERGAKELVKCDCCSD EQTAQHMCNHKLELALSMIKGLDYKPIQSPRGSRLPIPVKSSPPGARPGPIMADGVSS GFLNRSLKPLYKTPVSYPLEISDLQELWDDLCEEYLPLRVQPMTEESLRQQKLNSNET IITQQPVSDSHVAELQEKIQQIEATNKILQEKLNEMDYELKSAQESTQKQDGVIQGLK ETLKSRESETEELYQVIEGQNDTMAKLREMLHQSELGQLHSSEGASAAQQQVALLDLQ SALFCSQLEIQKLQRVVRQKERQLADAERCVQFAEAAAHDREQQREASWQHNQELRKA LQQIQGELQNKSQQLLTLETEKYNEIRTQEQHIQHLNHSLSHKEQLLQEFRELLQYRD NSDKAFEANEMLLEKLRQRIQDRDVALERAIDEKFSSLEEKEKELRQLRLAVRERDHD LERLRGVLSSNEATMQSLESLLRAKGLEVEQLSATCQNLQWLKEEMETKFGRWQKEQE SIIQQLQTSLHDRNKEVEARLYATLLCKLGPGQSEIAEELCQRLQRKERALQDLLSDR NRQAAEHEVEIQGLLQSVSAREQASQAAAERMVQALMERTSELQALRQYLGGKDFMVS QALISNQPTEVTCISPHLGEQIDQGSVHLPSGGDNSPLTAKGDTSLPRPSLGDSDAVA GLEKELSNAKEELELMAKKERESRMELSALQSMMAMQEEELQVQAADLESLTRTVQIK EDLIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEASGNRRQQLLLTLEG LVDERSRLNEALQAERQLYSSLVKFHAHPESSERDRTLQVELEGAQVLRGRLEEVLGR SLERLSRLETLAAIGGGELESVRGRHKHAF" assembly_gap 17302609..17302664 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17324404..17324537 /estimated_length=134 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17344082..17344105 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17353389..17354840 /estimated_length=1452 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17361927..17361963 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17364796..17364838 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17377254..17377285 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17384154..>17391834) /locus_tag="PAL_GLEAN10017484" mRNA complement(join(<17384154..17384231,17386219..17386287, 17386991..17387124,17387894..17388014,17388254..17388347, 17389117..17389283,17391763..>17391834)) /locus_tag="PAL_GLEAN10017484" /product="5'-AMP-activated protein kinase subunit beta-2" CDS complement(join(17384154..17384231,17386219..17386287, 17386991..17387124,17387894..17388014,17388254..17388347, 17389117..17389283,17391763..17391834)) /locus_tag="PAL_GLEAN10017484" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="5'-AMP-activated protein kinase subunit beta-2" /protein_id="ELK05975.1" /db_xref="InterPro:IPR006828" /db_xref="UniProtKB/Swiss-Prot:O43741" /translation="MEPVLDPSFPYPSLAICEIGKPIQLPGDKEFVSWQQDLEDSARP AQQARPTVIRWSEGGEAVFISGSFNNWSAKIPLIKSHNDFVAILDLPEGEHQYKFFVD GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLTSSPPGP YGQEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI KDSVMVLSATHRYKKKYVTTLLYKPI" gene <17392134..>17392538 /locus_tag="PAL_GLEAN10017485" mRNA <17392134..>17392538 /locus_tag="PAL_GLEAN10017485" /product="hypothetical protein" CDS 17392134..17392538 /locus_tag="PAL_GLEAN10017485" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05976.1" /translation="MRWQVTLYLLRGKRQETANALVSVPPISTSSQSALIYSMLSALR VINIWTAITLLSPPSGLSAECLQTATFLKVLGIDSKVFRQRGWSVSSPGGITRHHRPA GVTPNHWFSHLRSWARKKHNLSHHIYEVWGQN" assembly_gap 17393116..17394035 /estimated_length=920 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17394900..17394926 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17397631..17397650 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17397741..>17414075) /locus_tag="PAL_GLEAN10017486" mRNA complement(join(<17397741..17398095,17400193..17400265, 17402587..17402939,17405211..17405410,17408507..17408649, 17409418..17409580,17411972..17412160, 17413941..>17414075)) /locus_tag="PAL_GLEAN10017486" /product="Dimethylaniline monooxygenase [N-oxide-forming] 5" CDS complement(join(17397741..17398095,17400193..17400265, 17402587..17402939,17405211..17405410,17408507..17408649, 17409418..17409580,17411972..17412160,17413941..17414075)) /locus_tag="PAL_GLEAN10017486" /note="GO_function: GO:0004499 - flavin-containing monooxygenase activity [Evidence IEA]; GO_function: GO:0050660 - FAD or FADH2 binding [Evidence IEA]; GO_function: GO:0050661 - NADP or NADPH binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Dimethylaniline monooxygenase [N-oxide-forming] 5" /protein_id="ELK05977.1" /db_xref="InterPro:IPR000960" /db_xref="InterPro:IPR002257" /db_xref="InterPro:IPR020946" /db_xref="UniProtKB/Swiss-Prot:P49326" /translation="MTKKRIAVIGAGASGLPSIKCCLEEGLEPVCFERTGDIGGLWRF QEIPEEGRASIYKSVIINTSKEMMCYSDYLIPDHFPNYMHNSQVLEYFRMYAKEFDLL KYIRFKTNVCSVTKQPDFSTSGQWEVVTECAGKKEVNVFDGVMVCTGHHTYAHLPLDS FPGIEKFQGQYFHSREYKDPQSFTGKRIIVIGIGNSGGDLAVELSSVAKQVFLSTRRG SWILNRVGDKGYPQDVVSLTRFKQLFLQMCHESLINTYLENQLNQRFNHEMYGLKPKH RALSQHPTINDDLPNRILSGLVKVKGNVKEFTERAAIFEDGSREDDIDVVIFATGYSF AFPFLKDVVKTTKNKILLYKKVFPPNLEKPTLAIIGLIQPVGAIMPISELQGRWVAQV FKGLKTLPSQSEMITEITKIQEKLEKRYVESPRHTIQTDYVAIMDDLADLVGVKPNLL SLAFTDPKLALQLFLGPCTPIQYRLRGPGKWGGAREAILTTEDRIRKPMMTRAIENSS SSTSTITMARFMQAVVLFAVIVAYFELF" assembly_gap 17413796..17413843 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17423106..17423124 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17426272..17426650 /estimated_length=379 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17435614..>17510899 /locus_tag="PAL_GLEAN10017487" mRNA join(<17435614..17435865,17438544..17438650, 17439183..17439297,17444022..17444188,17445433..17445584, 17446250..17446342,17447658..17447754,17449153..17449226, 17450348..17450458,17452906..17453020,17453560..17453713, 17455544..17455709,17459661..17459809,17460546..17460709, 17461221..17461417,17462469..17462567,17472733..17472803, 17474350..17474464,17510403..>17510899) /locus_tag="PAL_GLEAN10017487" /product="Chromodomain-helicase-DNA-binding protein 1-like protein" CDS join(17435614..17435865,17438544..17438650, 17439183..17439297,17444022..17444188,17445433..17445584, 17446250..17446342,17447658..17447754,17449153..17449226, 17450348..17450458,17452906..17453020,17453560..17453713, 17455544..17455709,17459661..17459809,17460546..17460709, 17461221..17461417,17462469..17462567,17472733..17472803, 17474350..17474464,17510403..17510899) /locus_tag="PAL_GLEAN10017487" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Chromodomain-helicase-DNA-binding protein 1-like protein" /protein_id="ELK05978.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000330" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q86WJ1" /translation="MTLQQRVWPVRRGYGNQARSSVPVSEHSLGVCRNVHSLHLWCFP FLGLRLRSYQLEGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPF LIICPLSILSNWKEEMERFAPGLSCVTYAGDKEERAHLQQDLRQELRFHVLLTTYEFS AAFSLLLTGTPVQNSLRELYALLALLEPGVFPREQAEEFVQRYQDIEREPEAGSELHR LLRPFLLRRVKAEVASELPRKTEVVLYHGLSALQKRYYKAVLMKDLDAFENEVAKKVK LQNILSQLRKCVNHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSRGHRVLL FSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFVFLLSTRAGGV GMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEMVCGKAT AKLQLASTVVEGGHLTLGTQKPAASASLQLSEILKFGLDKLLSSEGSSMDEMDLESIL GETEDGQWACDVPPTAEGGNGELEEAKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQK TLLEKTSQEGRLLRNKGRVLIPGLVEGATKRKQILSPEELEDRRNKRQAAAAKRKRLM EEKRRRKEEAEREKKVAWWVSSHYRSFCLPSEDSEAESGEDDGAPQLGDEDSDSTSIK YVSGDVTHPQAGAEDAVIVHCVDDSGCWGRGGLFTALEKRSAEPRKIYELAGKMKDLS LGGVLLFPIDDKESRNEGQDLLALIVAQHRDRANVLSGIKMAALEEGLKKIFLAAKKK KVYYLFSTLSFLDICYSSTAILVMLVSFQEKVISHECCLSQIFFLMTCAGTKSVLLAA IAYDHHVAIFHLLQYLLLMSLKFCVYLLAGTWMCALVTSAVAPCGPNQINYLLCDIPL FLMLSCSDASLSESVLHVASATSGLSPCLFTSVSYTLITSAILRLPPARD" assembly_gap 17480452..17480648 /estimated_length=197 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17493276..17493310 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17498419..17498458 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17501753..17501774 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17504918..17504973 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17532505..17532571 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17540813..17540836 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17550579..17550701 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17566969..17567086 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17572485..>17608297) /locus_tag="PAL_GLEAN10017488" mRNA complement(join(<17572485..17572563,17576112..17576263, 17608073..>17608297)) /locus_tag="PAL_GLEAN10017488" /product="hypothetical protein" CDS complement(join(17572485..17572563,17576112..17576263, 17608073..17608297)) /locus_tag="PAL_GLEAN10017488" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05979.1" /translation="MMLPECSIALVLLFARGTFRKRITLYSVMSAFDSHKRSIGIYFH SRRALGEKKSYRDYRQDFEKQNDAMKSLRLSFALRHGRLLEPLAPTTPINDGRGGDGD DNTSHFRSSIYSSLSVFLSGYTVRQLSENALEIARLVSAFRGARMNDKR" assembly_gap 17578323..17578736 /estimated_length=414 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17595715..17595751 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17610734..17610779 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17617347..17617402 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17628476..17629123 /estimated_length=648 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17634358..17635788 /estimated_length=1431 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17640773..>17651830 /locus_tag="PAL_GLEAN10017489" mRNA join(<17640773..17640825,17641754..17642070, 17643099..17643288,17644192..17644291,17645720..17646583, 17646779..17648003,17649205..17649465,17650713..>17651830) /locus_tag="PAL_GLEAN10017489" /product="B-cell CLL/lymphoma 9 protein" CDS join(17640773..17640825,17641754..17642070, 17643099..17643288,17644192..17644291,17645720..17646583, 17646779..17648003,17649205..17649465,17650713..17651830) /locus_tag="PAL_GLEAN10017489" /codon_start=1 /product="B-cell CLL/lymphoma 9 protein" /protein_id="ELK05980.1" /db_xref="UniProtKB/Swiss-Prot:O00512" /translation="MHPSNPKVRDSPSGNAQSSPKSKQEVMVRPPTVMSPSGNPQLDS KFSNQGKQGGSASQSQPSPCDSKSGGHTPKALPGPGGSMGLKNGAGNGAKGKGKRERS ISADSFDQRDPGTPNDDSDMKECNSADHIKSQDSQHTPHSMTPSNAAAPRPSTPSHGQ TTAPEPTPAQKTPAKVVYVFSTEMANRAADAVLKGQVETIVSFHIQNTSSSKADRSTA PANTQLSALRSDLKPVPPQPTAPAGQDQNASQNTRLQPTPPITAPAPKPAAPPRPLDR DSPGVENKLIPAVGSPASSTPLPPDGAGSNSTPNNRAVTPVSQGSSSSSADPKAPPPA AVPGGEPPSLGENPDGLSQEQLEHRERSLQTLRDIQRMLFPDEKEFTGQGGGPQQSTG VLDGPQKKPEGPIQAMMAQSQSLGKGPGPRTDVGVLLGPQGHRDVPFSPDEMVAPSLN SQPGPIGPDHLDHMTPEQIAWLKLQQEFYEEKRRKQEQVVVQQCALQDVMAHPHGPRS MRLPGFAGMINSEMEGPSVPNPASRPGLSGVSWPDDVPKIPDGRNFPPGQGVFSGPGR GERFPNPQGLSEEMFQQQLAEKQLGLPPGMSVEGIRPGMDMSRMIAGSQRHMEPGNNP IFPRIPVEGPLSPSRGDFPKGMPPQMGPGRELEFGMVPGGMKADVGLSVSMGSSAQML PQKVREAGAGPDEMMKLRPGGTDMLPAQQKMVPLPFGEHPQQEFGMGPRPFLPTSQGP GSGGGLRNLREPVGPDQRTNSRLSHMPPLPLNPSSNPPGLNTAPTVQRGLGRKPLDVS VAGSQVHSPGINPLKSPTMRQVQSPMLGSPSGNLKSPQTPSQLAGMLAGPAAAASIKS PPVLGSAAASPVHLKSPSLPAPSPGWTSSPKPPLQSPGIPPSHKAPLAMASPAMLGSV ESGGPPPPTASQPASVNIPGGLPSSTPYTMPPEPTLSQNPLSIMMSRMSKFAMPSSTP LYHDAIKTVASSDDDSPPARSPNLPSMNNMPGMGINTQNPRISGPNPVVPMPTLSPMG MTQPLSHSNQMPSPNAMGPNIPPHGVPMGPGLMTHNPIMGHGSQEPPMVPQGRLGFPQ GFPPVQSPPQQVPFPHNGPSGGQGNFPGGMGFPGEGPLGRPSNLPQTSADAALCKPGG PGGPDSFAVLGSSVPSVFTDPDLQEVIRPGATGIPEFDLSRIIPSEKPSQTLQYFPRG EVPGRKQPQGPGPGFSHMQGMMGEQAPRMGLALPGMGGPGPVGTPDIPLGTAPSMPGH SPMRPPAFLQQGMMGPHHRMMSPAQSTMPGQPTLMSNPAAAVGMIPGKDRGPAGLYTH PGPVGSPGMMMSMPGMMGPQQNIMIPPQMRPRGMAADVGMGGFSQGPGNPGNMMF" assembly_gap 17646601..17646700 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17653502..17653725 /estimated_length=224 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17662715..17662786 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17665435..17665475 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17670943..>17686319) /locus_tag="PAL_GLEAN10017490" mRNA complement(join(<17670943..17671086,17671665..17671830, 17673258..17673353,17674631..17674728,17675357..17675489, 17676260..17676347,17679011..17679090,17679430..17679560, 17679679..17679810,17686098..>17686319)) /locus_tag="PAL_GLEAN10017490" /product="Lysophosphatidic acid phosphatase type 6" CDS complement(join(17670943..17671086,17671665..17671830, 17673258..17673353,17674631..17674728,17675357..17675489, 17676260..17676347,17679011..17679090,17679430..17679560, 17679679..17679810,17686098..17686319)) /locus_tag="PAL_GLEAN10017490" /note="GO_function: GO:0003993 - acid phosphatase activity [Evidence IEA]" /codon_start=1 /product="Lysophosphatidic acid phosphatase type 6" /protein_id="ELK05981.1" /db_xref="InterPro:IPR000560" /db_xref="UniProtKB/Swiss-Prot:Q9NPH0" /translation="MIARAFGARLWAPLGVLASLGYYLQQRRLALAHPRAADGQQPPV DRNLLKLKMVQVVFRHGARSPLKPLPQQEQQVEWNPRLLEVPPQTRFDYTVTSLAGGP QPYSPFDSAYRETVLKGGMFAGQLTSVGMSQMFALGERLRKNYVEDVPFLSPTFDPQE VFVRSTNIYRNLESTRCLLAGLFRYQKEGPITIYTDEASSEVLYPNYQNCWNLRERTR SRTQTASLQPGISEDLKKVREGMGIASGDGVDFRLLFDNMAAEQVHGLLSCPMLEHFA RVIEQRAVDVALYVQNGDREGLQMTVGPFLHLLESNLLSAVDPATPPGDTRKLYLYAV HDMTLIPLLTALGIFDHKWPPFAVDVTIELYQHQKSKEWFVQLYYHGEKQVPRGCPDQ LCPLDKFLNSMSVYILTPEKYHTLCSQAQVTELRNGE" assembly_gap 17672652..17672689 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17697216..17697288 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17700702..17700927 /estimated_length=226 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17702226..17702349 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17723787..>17724863) /locus_tag="PAL_GLEAN10017491" mRNA complement(<17723787..>17724863) /locus_tag="PAL_GLEAN10017491" /product="Gap junction alpha-5 protein" CDS complement(17723787..17724863) /locus_tag="PAL_GLEAN10017491" /note="GO_component: GO:0005922 - connexon complex [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]" /codon_start=1 /product="Gap junction alpha-5 protein" /protein_id="ELK05982.1" /db_xref="InterPro:IPR000500" /db_xref="InterPro:IPR002264" /db_xref="InterPro:IPR013092" /db_xref="InterPro:IPR019570" /db_xref="UniProtKB/Swiss-Prot:P33725" /translation="MGDWSFLGEFLEEVHKHSTVIGKVWLTVLFIFRMLVLGTAAESS WGDEQADFQCDTIQPGCENVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAVHHVRM EEKRKLREAERAREARGAGPCEYPVGEKAELSCWEEANGRIVLRGTLLNTYVCSILIR TTMEVAFIVGQYLLYGVFLDTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAGLS LVLSLAELYHLGWKKFRQRFAKSRPGVAECQLPGPAAGLAQSCTPPPAFSQCLENGPG GKFFNPFSNQVASQQNTDNLATEQVRGQEQVPGEGFIHVHYSQKPEVPSEVSSGHRLP HSYQSDKRRLSKASSKARSDDLSV" assembly_gap 17729642..17729794 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17747063..17747081 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17753360..17753376 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17767334..17767368 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17767968..17768303 /estimated_length=336 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17772730..17772760 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17779366..17779392 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17796777..17797077 /estimated_length=301 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17799399..17799514 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17804514..17804524 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17806927..17806995 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17809936..17810006 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17816687..>17818009 /locus_tag="PAL_GLEAN10017492" mRNA <17816687..>17818009 /locus_tag="PAL_GLEAN10017492" /product="Gap junction alpha-8 protein" CDS 17816687..17818009 /locus_tag="PAL_GLEAN10017492" /note="GO_component: GO:0005922 - connexon complex [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]" /codon_start=1 /product="Gap junction alpha-8 protein" /protein_id="ELK05983.1" /db_xref="InterPro:IPR000500" /db_xref="InterPro:IPR002266" /db_xref="InterPro:IPR013092" /db_xref="InterPro:IPR019570" /db_xref="UniProtKB/Swiss-Prot:P48165" /translation="MGDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFV WGDEQSDFVCNTQQPGCENVCYDEAFPISHIRLWVLQIIFVSTPSLVYVGHAVHHVRM EEKRKEREAEELCQQAAGDSGERGPLPADQGSIKKSSSSSKGTKKFRLEGTLLRTYIC HIVFKTLFEVGFVVGHYFLYGFRILPLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLS VASVSLFLNILEMSHLGLKRIRSAFKRQVEQPLGEIPEKSLHSIAVSSIQKAKGYQLL EEEKIVSHYFPLTEVGMVETSPLSAKPFGQFEEKMGTGPLGDLSRAYQETLPSYAQVG AQEVEAEEPPAEEGAEAEVAEKRQEADRVSTEGQETNDELEGDRVETPGAGKEGEKEE LPAEKASKQGLPAEKAPSLCPELTGDDTRPLSRLSKASSRARSDDLTV" gene complement(<17829619..>17829939) /locus_tag="PAL_GLEAN10017493" mRNA complement(<17829619..>17829939) /locus_tag="PAL_GLEAN10017493" /product="hypothetical protein" CDS complement(17829619..17829939) /locus_tag="PAL_GLEAN10017493" /codon_start=1 /product="hypothetical protein" /protein_id="ELK05984.1" /translation="MMLESIKKLMPKRKGGSCLRFRLTEATARSGRGTPYTGGLCPRT ATGAAARQPDAIKLRPSQPISGCIERFPAGAESQGAGPGGTPLWGGARETPLWGGAQL KGAE" gene <17844122..>17866361 /locus_tag="PAL_GLEAN10017494" mRNA join(<17844122..17844251,17844663..17844764, 17848936..17849056,17849682..17849762,17857609..17857718, 17859579..17859667,17860248..17860340,17863295..17863390, 17864991..17865080,17865946..17866011,17866080..>17866361) /locus_tag="PAL_GLEAN10017494" /product="Protein GPR89" CDS join(17844122..17844251,17844663..17844764, 17848936..17849056,17849682..17849762,17857609..17857718, 17859579..17859667,17860248..17860340,17863295..17863390, 17864991..17865080,17865946..17866011,17866080..17866361) /locus_tag="PAL_GLEAN10017494" /codon_start=1 /product="Protein GPR89" /protein_id="ELK05985.1" /db_xref="InterPro:IPR022535" /db_xref="UniProtKB/Swiss-Prot:Q9Y302" /translation="MAFDACFSSRYFHWKVNLCVILLVLVFTVPFYIGYFIVSNIRLL HKQRLLFSCLLWLTFMYFFWKLGDPFPILSPKHGILSIEQLISRVGVIGVTLMALLSG FGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRMAMTRRTMFQKGEVH NRPSGFWRMIKSVTTSAPGSENLTLIQQEVDALEELSRQLFLETADLYATKERIEYSK TFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVK FWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLAQIMCFNHFLPP VPHCIRSEFWVSVCGFQGMYFVSSVLLIRMSMPLEYRAIITQVLGELQFSFYHRWFDV IFLVSALSSILFLYLAHKQAPEKHMTP" gene complement(<17868499..>17878474) /locus_tag="PAL_GLEAN10017495" mRNA complement(join(<17868499..17868858,17869779..17869965, 17872020..17872132,17872236..17872432,17874520..17874715, 17875531..17875667,17877308..17877548, 17878265..>17878474)) /locus_tag="PAL_GLEAN10017495" /product="Na(+)/H(+) exchange regulatory cofactor NHE-RF3" CDS complement(join(17868499..17868858,17869779..17869965, 17872020..17872132,17872236..17872432,17874520..17874715, 17875531..17875667,17877308..17877548,17878265..17878474)) /locus_tag="PAL_GLEAN10017495" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Na(+)/H(+) exchange regulatory cofactor NHE-RF3" /protein_id="ELK05986.1" /db_xref="InterPro:IPR001478" /db_xref="UniProtKB/Swiss-Prot:Q5RCF7" /translation="MASTFNPRECKLSKQEGQHYGFFLRIEKDTDGHLVRVIEKGSSA EKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDETSYEKAVKTKVDL RELGQEPSANGKTPSPVANGGTQTPTQPRLCYLVKEGSSYGFSLKTVQGKKGVYMTDI TPQGVAMKAGVLADDHLMEVNGENVEDATHEEVVEKVRKSGSRVMFLLVDKETDKHHR EQNIKFERETASLQFLPLQPRAVEMKKGSSGYGFHLKSSPEQKGQVIKDIDPGSPAEA AGLKTNDLLVAVNGECVGSLGHDDVVEMIRKGGDQISLLVVDKETDELYRLSTGSLCF HSRAHGVSTGVRCRLMRVGPISAGWIICLLGQERPEGSVQEAPAPAAPLDGPSPDATE EAEHKPKLCRLVKGEQGYGFHLNALRGQPGSFVKEVQQGSPADLAGLEDEDIVIEVNG VNVLDEPYETVVDRVQSSGNEVTLLVCGKVAYDYFQAEKIPIVSSMADPLDAAPDTAE GSPAGSEPGSPAGSEPGXXXXXXXXXXXXXXXXASAVT" assembly_gap 17868518..17868563 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17910024..>17918036 /locus_tag="PAL_GLEAN10017496" mRNA join(<17910024..17910090,17910736..17911062, 17914210..17914347,17916980..17917076,17917605..17917774, 17917894..>17918036) /locus_tag="PAL_GLEAN10017496" /product="CD160 antigen" CDS join(17910024..17910090,17910736..17911062, 17914210..17914347,17916980..17917076,17917605..17917774, 17917894..17918036) /locus_tag="PAL_GLEAN10017496" /codon_start=1 /product="CD160 antigen" /protein_id="ELK05987.1" /db_xref="InterPro:IPR003599" /db_xref="UniProtKB/Swiss-Prot:O95971" /translation="MAPGRGCFALAVLLVIADIQLGGCMNISSSVSQEGERLSIICTV WHKEGEAEGVVVFLCKNRTQDCSPETSLEQLRLKRYRGPDGGSERSSQLVFTIDRAMP SNSGIYQCCARSQKSDIHLQGHFFSLSVTEPGNYTVMGLQGTGRRELSHSKGALSSGF RQEKLWAMLVTSLLALQGFTDVSVRAGGGGSTQAPRTPSTRNLAKRSLRVGALLLRAD AAHDALLIGLMSLTFPEEMRLDAREKETEACKSQRSPFGSNNLSWKKKVTSQQCPVTE NHRGKGLSVHSENRTVRPLPPPPPAHSTSAPYPFFLE" assembly_gap 17921693..17921758 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17921964..>17969613) /locus_tag="PAL_GLEAN10017497" mRNA complement(join(<17921964..17922095,17922762..17922877, 17925001..17925094,17926000..17926072,17927243..17927314, 17938780..17938991,17949069..17949126,17953012..17953070, 17969512..>17969613)) /locus_tag="PAL_GLEAN10017497" /product="RING finger protein 115" CDS complement(join(17921964..17922095,17922762..17922877, 17925001..17925094,17926000..17926072,17927243..17927314, 17938780..17938991,17949069..17949126,17953012..17953070, 17969512..17969613)) /locus_tag="PAL_GLEAN10017497" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="RING finger protein 115" /protein_id="ELK05988.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR018957" /db_xref="UniProtKB/Swiss-Prot:Q9D0C1" /translation="MAEASAAGAGSGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESG FIEEVTDDSSFLGGGGSRMDNSTSTHFAEFWRNLDHTMIIQDFRPFLSSNPLDQDNRA SERGHQTHTDFWGPSRPPRLPMTRRYRSQGSTRPDRSPAIEGIIQQFFAGFFANSAVP GSPHPLSWSGLLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTV TQEQVDTGLECSVCKEDYTVGEEVRQLPCNHFFHSSCIVPWLELHDTCPICRKSLNGE DSTWQTQSSEASASNRFSSDSQLHDRWTF" assembly_gap 17930185..17930215 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17936821..17936855 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17956221..17956233 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17967100..17967120 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <17970214..>17982594 /locus_tag="PAL_GLEAN10017498" mRNA join(<17970214..17970325,17971079..17971245, 17971774..17972029,17972135..17972320,17973375..17973463, 17976424..17976528,17976659..17976751,17978139..17978219, 17978473..17978524,17978832..17978892,17979355..17979505, 17980218..17980319,17980455..17980504,17980932..17981081, 17982516..>17982594) /locus_tag="PAL_GLEAN10017498" /product="DNA-directed RNA polymerase III subunit RPC3" CDS join(17970214..17970325,17971079..17971245, 17971774..17972029,17972135..17972320,17973375..17973463, 17976424..17976528,17976659..17976751,17978139..17978219, 17978473..17978524,17978832..17978892,17979355..17979505, 17980218..17980319,17980455..17980504,17980932..17981081, 17982516..17982594) /locus_tag="PAL_GLEAN10017498" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO_process: GO:0006350 - transcription [Evidence IEA]" /codon_start=1 /product="DNA-directed RNA polymerase III subunit RPC3" /protein_id="ELK05989.1" /db_xref="InterPro:IPR008806" /db_xref="InterPro:IPR013197" /db_xref="UniProtKB/Swiss-Prot:Q2TBL4" /translation="MAKGLGMLPRKHVDWDTEAERQRLASEELGEINEQTFALRLLST MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRNGSQSLRVIAHDTGTSLDQVKKALCVLI QHNLVIYQVHKRGVVEYEAQCSRVLRMLRYPRYIYIAKTLYSDTGELIVEELLLNGKM TMSAVVKKVADRLTETMEDGKTMDYAEVSNTFMRLADTHFVQRCPMVPATENSDPGPP PPAPTLVINEKDMYLVPKLSLIGKGKRRRSSEDDATGEPKAKRPKHTTDNKEPIPDDG IYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRVSEVTTPSGAPFTQPLSS HEIFRSLPVGYNIAKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALGSLATA TLESVVQERFGSRCARIFRLVLQKKHLEQKQVEDFAMIPAKEAKDMLYKMLSENFISL QEIPKTPDHAPSRTFYLYTVSILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKS QRVEAIIASMQATGAEEAQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFL LESYIESTMKR" assembly_gap 17984819..17985081 /estimated_length=263 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17988167..17988413 /estimated_length=247 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<17988811..>17993570) /locus_tag="PAL_GLEAN10017499" mRNA complement(join(<17988811..17988911,17989101..17989234, 17989399..17989567,17989648..17989781,17990479..17990635, 17991328..17991433,17991663..17991797,17992302..17992392, 17992631..17992681,17992918..17993002, 17993156..>17993570)) /locus_tag="PAL_GLEAN10017499" /product="E3 SUMO-protein ligase PIAS3" CDS complement(join(17988811..17988911,17989101..17989234, 17989399..17989567,17989648..17989781,17990479..17990635, 17991328..17991433,17991663..17991797,17992302..17992392, 17992631..17992681,17992918..17993002,17993156..17993570)) /locus_tag="PAL_GLEAN10017499" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 SUMO-protein ligase PIAS3" /protein_id="ELK05990.1" /db_xref="InterPro:IPR003034" /db_xref="InterPro:IPR004181" /db_xref="UniProtKB/Swiss-Prot:Q9Y6X2" /translation="MVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSV QMKIKELYRRRFPRKSLGPSDLSLLSLPPGTPPVGSPGPLAPIPPALLAPGTLLGPKR EVDMHPPLPQPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQV QQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLP PTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTL LQKLRAKGIRNPDHSRALRKMRLTVPCRALTCAHLQSFDAALYLQMNEKKPTWTCPVC DKKAPYDSLIIDGLFMEILNSCSDCDEIQFMEDGSWCPMKPKKEASEVCPPPGYGLDG LQYSPVQEGNPSENKKKVEVIDLTIESSSDEEDLPPSKKHCPVTSAAIPALPGSKGVL TSSHQPSSVLRSPAMGTLGGDFLSSLPLPEYPPAFPLGADIQGLDLFSFLQTESQVSG PPLPLKISDLRSLFSGH" assembly_gap 17995211..17995667 /estimated_length=457 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17996076..17996282 /estimated_length=207 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 17997348..17997438 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18000272..>18006109) /locus_tag="PAL_GLEAN10017500" mRNA complement(join(<18000272..18000331,18000914..18000979, 18001229..18001318,18002864..18004879,18005041..18005078, 18005703..18005887,18005964..>18006109)) /locus_tag="PAL_GLEAN10017500" /product="Ankyrin repeat domain-containing protein 35" CDS complement(join(18000272..18000331,18000914..18000979, 18001229..18001318,18002864..18004879,18005041..18005078, 18005703..18005887,18005964..18006109)) /locus_tag="PAL_GLEAN10017500" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Ankyrin repeat domain-containing protein 35" /protein_id="ELK05991.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="UniProtKB/Swiss-Prot:Q8N283" /translation="MEPFPLAPRFLMLQLQGMTCEKFWSGLMLCRWLVLVCGSPAHTE GEVTSSALILACEKGSAEVAELLLSHGADVGAVDSMGHDALYYGMRTQDKALWKLLQQ ALSRRRRGGQELAQHPDVASKAPPSEPQVGSPPKNSWKAEPEEEQEDEEDEAPCSDEW RWKYEEERRKVSKLEQELGRKEEECKAQAAAYLGLENQIREQVQELGLLLSQELGAPG GQGSPLRPGGDGMEQGCPLDLLAERIQELKKQQRAAAAGAANLVLAPEKAEDSAPGEG PYKAHGRSQPEEQRPLQSPRSETVGNITGQQLPANGGEALGPDHTEQLLNGQKERPQA PGARPTGTVVEPTGTAATPQLLLQLREELAAVWREKDAAWGALSRPVLEGALGTPQAE AAAAAWEKMEARLEQVLVRLDRAKAGLQETPEAPAQEPKEGAPKVGPETITKEDEGRE QRAPGARGEPLGAPGGEQMPGGGPAKGPLEKEVSALRLSNSNLLEELGTLGRERQRLQ GELQSLSQRLQREFVPKPEAQVQLQQLRRSVGLLTDELAMEKEATEKLRKRLASQSSG LRGLWDCLPPDLVGKGSAGGPATQPLEELQACISTLVARHREAQQVLARLEEENQRLR GSPAQRGEPGASSKVPACPEVAALEQDLGKLEEELRAVQATMSGKSQEIGKLKKLLYQ ATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKALLEKYNTACREMGRLREAV AEERRRSGNLAARAAEQERQAGEMRGRSEQFEKTAELLREKTEHLLGACRDKEAKIKE LLKKLEQLSEEVLAVRGENARLALQLQDSQKNHEEVISTYRNHLLNAAQGYMEQDVYN ILLRILSIQE" gene complement(<18019022..>18029364) /locus_tag="PAL_GLEAN10017501" mRNA complement(join(<18019022..18019084,18019380..18019493, 18019718..18019867,18021160..18021273,18021416..18021496, 18021753..18021866,18022037..18022121,18022469..18022627, 18022722..18022798,18022945..18023037,18023188..18023329, 18023468..18023553,18023755..18023868,18024324..18024409, 18024502..18024668,18025055..18025185,18026027..18026230, 18026359..18026502,18026737..18026885,18027087..18027231, 18027473..18027546,18027738..18027903,18028112..18028262, 18028929..18029077,18029251..>18029364)) /locus_tag="PAL_GLEAN10017501" /product="Integrin alpha-10" CDS complement(join(18019022..18019084,18019380..18019493, 18019718..18019867,18021160..18021273,18021416..18021496, 18021753..18021866,18022037..18022121,18022469..18022627, 18022722..18022798,18022945..18023037,18023188..18023329, 18023468..18023553,18023755..18023868,18024324..18024409, 18024502..18024668,18025055..18025185,18026027..18026230, 18026359..18026502,18026737..18026885,18027087..18027231, 18027473..18027546,18027738..18027903,18028112..18028262, 18028929..18029077,18029251..18029364)) /locus_tag="PAL_GLEAN10017501" /note="GO_component: GO:0008305 - integrin complex [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007155 - cell adhesion [Evidence IEA]" /codon_start=1 /product="Integrin alpha-10" /protein_id="ELK05992.1" /db_xref="InterPro:IPR000413" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR013517" /db_xref="InterPro:IPR013519" /db_xref="InterPro:IPR013649" /db_xref="UniProtKB/Swiss-Prot:O75578" /translation="MDVVIVLDGSNSIYPWSEVQTFLRRLVGRLFIDPEQIQVGLVQY GESPVHEWSLGDFRTKEEVVRAARNLSRREGRETKTAQAIMVACTEGFSQSHGGRPEA ARLLVVVTDGESHDGEELPAALKACEAGRVTRYGIAVLGHYIRRQRDPSSFLREIRAI ASDPDERFFFNVTDEAALTDIVDALGDRIFGLEGSRGENESSFGLEMSQIGFSTHRLK DGILFGMVGAYDWGGSVLWLEEGHRLFPPRTALEDEFPPALQNHAAYLGYSVSSMFLR GGRRLFLSGAPRFRHRGKVIAFQLKKDGAVRVAQSLQGEQIGSYFGSELCPLDTDRDG TTDVLLVAAPMFLGPQNKETGRVYVYLVGQQPLLTFQGTLQPEPAQDARFGFAMGALP DLNQDGFADVAVGAPLEDGHRGALYLYHGTQNGVRPRPAQRIAAVSMPQALSYFGRSV DGRLDLDGDDLVDVAVGAQGAAVLLSSQPIVHLAPSLDVTPPAISVVQRDCRRRGQEA ACLSAALCFQVTSRTRGRWDRRFHLRFTASLDEWTAGARAAFDGSGQRLPAADTSDYL RPVVLTVTFALDNTTKRGPVLDEGSPTSIRKLVPFSKDCGPDNECVTDLVLRADMDIR GSRQDPFLVRGGRRKVLVSVILENRMENAYNTSLSLSFSRNLHLASFTPQRDRPVKVE CAAPAPHARLCSVGHPVFPTGAKVTFLLEFEFSCSALLSRVLVRLTATREGCLSRGVS LSLPLPPTPHRLYSNSLESSETLRDNTAEASAYVQYEPHLLFSSESTLHRYEVHPYGT LPVGPGPEFKTTLKVQNLGCYVVSGLIISAFLPAVAHGGNYFLSLSQVITNNASCTVQ NLTEPPGHPVHPEDLQHTSRLNGSNTRCQVVRCHLGWLAKGTEVSVGLLRLVHNEFFR KAKFKSVTVVSTFELGAEEGSVLQLTEASRWSEVGPEAKAESCENSEGGDGSLLEVIQ TRPILISLWILIGSVLGGLLLLALLVFCLWKLGFFARKIPEEEKREEKLEQ" assembly_gap 18020013..18020470 /estimated_length=458 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18024311..18024322 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18030207..>18032696) /locus_tag="PAL_GLEAN10017502" mRNA complement(join(<18030207..18030505,18030721..18030830, 18031018..18031129,18032645..>18032696)) /locus_tag="PAL_GLEAN10017502" /product="Integrin alpha-10" CDS complement(join(18030207..18030505,18030721..18030830, 18031018..18031129,18032645..18032696)) /locus_tag="PAL_GLEAN10017502" /codon_start=1 /product="Integrin alpha-10" /protein_id="ELK05993.1" /db_xref="InterPro:IPR013519" /db_xref="UniProtKB/Swiss-Prot:O75578" /translation="MELPLIPHLCWPLMFLTGLCSPFNLDVHHPRLFPGPPETEFGYS VLQHVGGGRRWMLVGAPWDGPSGDRRGDVYRCPVGGSHNAPCAKGHLGDYPLGNSSRP AVNMHLGMSLLETDGDGGFMVSSGKGGGWVSEGSWQRKEPYVRETGLCGGGTEFKTLE SEEGNLGEGPQCLLLLGACSVGALPSLRAT" gene complement(<18034333..>18038727) /locus_tag="PAL_GLEAN10017503" mRNA complement(join(<18034333..18034738,18037166..18037367, 18037781..18037896,18038672..>18038727)) /locus_tag="PAL_GLEAN10017503" /product="Peroxisomal membrane protein 11B" CDS complement(join(18034333..18034738,18037166..18037367, 18037781..18037896,18038672..18038727)) /locus_tag="PAL_GLEAN10017503" /codon_start=1 /product="Peroxisomal membrane protein 11B" /protein_id="ELK05994.1" /db_xref="UniProtKB/Swiss-Prot:Q9Z210" /translation="MDAWVRFSAQSQARERLCRAAQYACSLLGHALQKHGASPELQRQ IRQLEGHLSLGRKLLRLGNSADALESAKRAVHLSDVVLRFCITVSHLNRALYFACDNV LWAGKSGLAPRVDQEKWAQRSFRYYLFSLIMNLSRDAYEIRLLMEQESSACSRRQKGS GGGVPGGMETGGPGGPGTPAGGLPQLALKLQLRVLLLARVLRGHPPLLLDVVRNACDL FIPLDKLGLWRCGPGIVGLCGLVSSILSILTLICPWLRLKP" gene complement(<18042946..>18044452) /locus_tag="PAL_GLEAN10017504" mRNA complement(join(<18042946..18042991,18043105..18043241, 18043522..18043658,18043840..18043917,18044050..18044109, 18044386..>18044452)) /locus_tag="PAL_GLEAN10017504" /product="RNA-binding protein 8A" CDS complement(join(18042946..18042991,18043105..18043241, 18043522..18043658,18043840..18043917,18044050..18044109, 18044386..18044452)) /locus_tag="PAL_GLEAN10017504" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_process: GO:0006396 - RNA processing [Evidence IEA]" /codon_start=1 /product="RNA-binding protein 8A" /protein_id="ELK05995.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR008111" /db_xref="UniProtKB/Swiss-Prot:Q27W01" /translation="MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEE GSRARMREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNI HLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR GGRRRSRSPDRRRR" assembly_gap 18048843..18048945 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18049344..>18067797) /locus_tag="PAL_GLEAN10017505" mRNA complement(join(<18049344..18049586,18049927..18050004, 18050372..18050467,18054701..18054841,18057301..18057464, 18065352..18065425,18067757..>18067797)) /locus_tag="PAL_GLEAN10017505" /product="LIX1-like protein" CDS complement(join(18049344..18049586,18049927..18050004, 18050372..18050467,18054701..18054841,18057301..18057464, 18065352..18065425,18067757..18067797)) /locus_tag="PAL_GLEAN10017505" /codon_start=1 /product="LIX1-like protein" /protein_id="ELK05996.1" /db_xref="UniProtKB/Swiss-Prot:Q8IVB5" /translation="MGPGPNSLAFVQKHPAVLREAVEAVVRSFAKHTQGYGRVNVVEA LQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEAR RSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFML ESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMA LDWVSREQSVPGALSRELASTERELDEARLAGKELRFHKEKKDILMLAAGQLGNMHSS NC" assembly_gap 18065437..18065594 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18068101..>18069588) /locus_tag="PAL_GLEAN10017506" mRNA complement(<18068101..>18069588) /locus_tag="PAL_GLEAN10017506" /product="Ankyrin repeat domain-containing protein 34A" CDS complement(18068101..18069588) /locus_tag="PAL_GLEAN10017506" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Ankyrin repeat domain-containing protein 34A" /protein_id="ELK05997.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="UniProtKB/Swiss-Prot:Q5BJT1" /translation="MLHTEGHALLRAVGQGKLRLARLLLEGGAYVNEGDAQGETALMA ACRARYDDPQNKARMVRYLLEQGADPNIADRLGRTALMHACAGGGGAAVASLLLAHGA DPSVRDHAGASALVHALDRGDRETLATLLDACKAKGTEVIIITTDTSPSGTKKTRQYL NSPPSPGVEDPAPAPPSPGVCTSPSEIQLQTAGGGRGLISPRTQEEEEKRDVFEFPLP KPPDDPSPSEPLPKPPRHPPKPLKRLNSEPWGLVAPPQPVPPAEGRPGLERLTAEFNG LTLTGRPRLSRRHSTEGPEAPPPWAEKVMGGGPLSRRNTAPEAQESGPPSGLRQKLSR MEPVELDTPGNMCPDSPECSRPSLERRRYSASPLTLPLAGSAPSPRQSQESLPGAVSP LSGRRRSPGLLERRGSGTLLLDHISQTRPGFLPPLNVSPHPPIPDIRPQPGGRAPSLP APPQAGAPGSPRTKRKLVRRHSMQTEQIRLLGGFQSLGGPGEPGR" gene <18078867..>18081657 /locus_tag="PAL_GLEAN10017507" mRNA join(<18078867..18078992,18079333..18079462, 18080308..18080376,18080693..18080860,18080987..18081060, 18081175..18081288,18081571..>18081657) /locus_tag="PAL_GLEAN10017507" /product="DNA-directed RNA polymerase III subunit RPC7-like protein" CDS join(18078867..18078992,18079333..18079462, 18080308..18080376,18080693..18080860,18080987..18081060, 18081175..18081288,18081571..18081657) /locus_tag="PAL_GLEAN10017507" /codon_start=1 /product="DNA-directed RNA polymerase III subunit RPC7-like protein" /protein_id="ELK05998.1" /db_xref="UniProtKB/Swiss-Prot:Q1RMR0" /translation="MASRGGGRGRGRGQLTFNMEAVGIGKGDALPPPTLQPSPLFPPL EFHPVPLPSGEEGEYVLALKQELRGAMRQLPYFIRPAVPKRDVERYSDKYQMSGPIDN AIDWNPDWRRLPRELKIRVRKLQKERECIWRKRKERFPSSAGGGRRLRVVLPAPPIPT RISQWTTILLPKKPPKTTEDKEETIQKLETLEKKEEEVTSEEDEEKEEEEEKEEEEEE EYDEEEHEEETDYIMSYFDNGEDFGGDSDDNMDEAIY" assembly_gap 18083801..18083817 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18084155..18084200 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18092278..>18094737) /locus_tag="PAL_GLEAN10017508" mRNA complement(join(<18092278..18092313,18092443..18092594, 18092703..18092859,18092969..18093225,18093351..18093453, 18093672..18093819,18093939..18094011, 18094488..>18094737)) /locus_tag="PAL_GLEAN10017508" /product="Thioredoxin-interacting protein" CDS complement(join(18092278..18092313,18092443..18092594, 18092703..18092859,18092969..18093225,18093351..18093453, 18093672..18093819,18093939..18094011,18094488..18094737)) /locus_tag="PAL_GLEAN10017508" /codon_start=1 /product="Thioredoxin-interacting protein" /protein_id="ELK05999.1" /db_xref="InterPro:IPR011021" /db_xref="InterPro:IPR011022" /db_xref="InterPro:IPR014756" /db_xref="UniProtKB/Swiss-Prot:Q9H3M7" /translation="MVMFKKIKSFEVVFSEPDKVYSSGEKVTGRVIVEVCEVTRVKAV RVLACGMAKVLWMQGSQQCKQTLEYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFG FELPQGPLGTSFKGKYGRVDYWVKAFLDRPSQPTQETKKNFEVMDIVDINTPDLRAPV SAKKEKKVSCMFIPDGRVSVSARIDRKGFCEGDEISIHADFENTCSRIVVPKAAIVAR HTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKIRPSILGCSILRVEYFL LIYVSIPGSKKIILDLPLVIGGRSGLSSRTSSMASQTSSEMSWVDLNIPGTPEAPPCY MDIIPEDHRLESPTTPLLDDTDGSQDSPIFMYAPEFKFMPPPTYTEVDPCILNNNVQ" gene complement(<18108149..>18110328) /locus_tag="PAL_GLEAN10017509" mRNA complement(join(<18108149..18108757,18109259..18109350, 18110232..>18110328)) /locus_tag="PAL_GLEAN10017509" /product="Hemojuvelin" CDS complement(join(18108149..18108757,18109259..18109350, 18110232..18110328)) /locus_tag="PAL_GLEAN10017509" /codon_start=1 /product="Hemojuvelin" /protein_id="ELK06000.1" /db_xref="InterPro:IPR009496" /db_xref="InterPro:IPR010536" /db_xref="UniProtKB/Swiss-Prot:Q6ZVN8" /translation="MGDPGRSPSLRFPHGGPPTLSTVTLLLLLCGYGAWPLLDNDFLF VQATSFPVASGTNATTTRKLTVXXXXXXXXYQAEVDNLPAAFEDGSINGGDRPGGASL SIGTANPGSHVEIRAAYIGTTIIIRETAGQLSFSIKVAEDVARAFSAEQDLQLCVGGC PPSQRLSRSERNRRGAVSIDTARRLCKKGLPVEDAYFHSCVFDVLISGDPNFTVAAQA ALEDARAFLPDLEKLHLFPSDAGVPLCSATLPAPLLSGLFVLWLCIQ" assembly_gap 18108727..18108747 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18109479..18109743 /estimated_length=265 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18127210..18127339 /estimated_length=130 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18132036..18132894 /estimated_length=859 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18136007..18136189 /estimated_length=183 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18137614..>18140565 /locus_tag="PAL_GLEAN10017510" mRNA join(<18137614..18137799,18140431..>18140565) /locus_tag="PAL_GLEAN10017510" /product="hypothetical protein" CDS join(18137614..18137799,18140431..18140565) /locus_tag="PAL_GLEAN10017510" /codon_start=1 /product="hypothetical protein" /protein_id="ELK06001.1" /translation="MSWQIETTDPTEKAGPLPEEPSRPLVATSEMTPTGRGQPQKQLR DPGGSGKGARMRKRWHTREADEAPDLASTHLQATSSLPKNRERKLRKNQRPTSSFAVS EIAF" assembly_gap 18140992..18141536 /estimated_length=545 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18142538..18143310 /estimated_length=773 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18145411..18150294 /estimated_length=4884 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18153123..18154245 /estimated_length=1123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18163265..18163687 /estimated_length=423 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18182982..>18190636 /locus_tag="PAL_GLEAN10017511" mRNA join(<18182982..18183183,18188083..18188334, 18189237..18189518,18190335..>18190636) /locus_tag="PAL_GLEAN10017511" /product="High affinity immunoglobulin gamma Fc receptor I" CDS join(18182982..18183183,18188083..18188334, 18189237..18189518,18190335..18190636) /locus_tag="PAL_GLEAN10017511" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="High affinity immunoglobulin gamma Fc receptor I" /protein_id="ELK06002.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="UniProtKB/Swiss-Prot:P12314" /translation="MESVTLWCEGPRLREDDPTQWFLNGTAIQTLTPSYTIAAASVSD VGEYTCLTGLSVLSDPVQLEIHENWLLLQVSSRVVTEGNPLALRCHGWQNKLLYNVLF YQNGKIFHFSPKNSEYTILKTNLSHNGIYHCSGTGKHKFTSAGVSITVKELFPAPVLR ASSFSILEGSPVNLSCETKPPPQRPAVRLYFSFHVGGRVLRDRTSSSEYQIVTATRED SGFHWCEASTEDGNVIKRSPELKLQVLGLQSPTHLWFHVLFYLVVVTMFLMNTVFYVI IRKELQRKKKWNSEISLDSAHTRKVSSYLQRDRHLEEELKCQEQEQLQERAQQKAQDG EQQQRQLSSCV" assembly_gap 18196342..18196566 /estimated_length=225 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18203067..>18203447) /locus_tag="PAL_GLEAN10017513" mRNA complement(<18203067..>18203447) /locus_tag="PAL_GLEAN10017513" /product="Histone H2B type 2-F" CDS complement(18203067..18203447) /locus_tag="PAL_GLEAN10017513" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H2B type 2-F" /protein_id="ELK06003.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q5QNW6" /translation="MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYK VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL LPGELAKHAVSEGTKAVTKYTSSK" gene complement(<18204606..>18205016) /locus_tag="PAL_GLEAN10017514" mRNA complement(<18204606..>18205016) /locus_tag="PAL_GLEAN10017514" /product="Histone H3" CDS complement(18204606..18205016) /locus_tag="PAL_GLEAN10017514" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H3" /protein_id="ELK06004.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:P84239" /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" gene <18210649..>18210960 /locus_tag="PAL_GLEAN10017515" mRNA <18210649..>18210960 /locus_tag="PAL_GLEAN10017515" /product="Histone H4" CDS 18210649..18210960 /locus_tag="PAL_GLEAN10017515" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0016986 - transcription initiation factor activity [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]; GO_process: GO:0006352 - transcription initiation [Evidence IEA]" /codon_start=1 /product="Histone H4" /protein_id="ELK06005.1" /db_xref="InterPro:IPR001951" /db_xref="InterPro:IPR004823" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q28DR4" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG G" assembly_gap 18212768..18214066 /estimated_length=1299 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18214659..18215456 /estimated_length=798 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18216912..18218267 /estimated_length=1356 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18219970..18220260 /estimated_length=291 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18223257..>18223921) /locus_tag="PAL_GLEAN10017516" mRNA complement(join(<18223257..18223514,18223787..>18223921)) /locus_tag="PAL_GLEAN10017516" /product="Histone H3.2" CDS complement(join(18223257..18223514,18223787..18223921)) /locus_tag="PAL_GLEAN10017516" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H3.2" /protein_id="ELK06006.1" /db_xref="InterPro:IPR000164" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q64400" /translation="MDGQRGTFDFSRPAQSGKDCAYKDGCGGPGLRSCAPPLCCSARV PIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDT NLCAIHAKRVTIMPKDIQLARRIRGERA" assembly_gap 18223557..18223747 /estimated_length=191 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18224925..>18225317) /locus_tag="PAL_GLEAN10017517" mRNA complement(<18224925..>18225317) /locus_tag="PAL_GLEAN10017517" /product="Histone H2A type 2-A" CDS complement(18224925..18225317) /locus_tag="PAL_GLEAN10017517" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H2A type 2-A" /protein_id="ELK06007.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q6GSS7" /translation="MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERV GAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVT IAQGGVLPNIQAVLLPKKTESHHKAKGK" gene <18225672..>18226052 /locus_tag="PAL_GLEAN10017518" mRNA <18225672..>18226052 /locus_tag="PAL_GLEAN10017518" /product="Histone H2B type 2-E" CDS 18225672..18226052 /locus_tag="PAL_GLEAN10017518" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H2B type 2-E" /protein_id="ELK06008.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q16778" /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYK VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL LPGELAKHAVSEGTKAVTKYTSSK" gene complement(<18231897..>18232277) /locus_tag="PAL_GLEAN10017519" mRNA complement(<18231897..>18232277) /locus_tag="PAL_GLEAN10017519" /product="Histone H2B type 2-E" CDS complement(18231897..18232277) /locus_tag="PAL_GLEAN10017519" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H2B type 2-E" /protein_id="ELK06009.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q16778" /translation="MPEPAKSAPAPKKGSKKHQTKAQKKDGKKRKRSRKESYSIYVYK VLKQVRHRHGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL LPGELAKHAVSEGTKAVTKYTSSK" assembly_gap 18234104..18243732 /estimated_length=9629 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18244258..>18244638) /locus_tag="PAL_GLEAN10017520" mRNA complement(<18244258..>18244638) /locus_tag="PAL_GLEAN10017520" /product="Histone H2B type 2-E" CDS complement(18244258..18244638) /locus_tag="PAL_GLEAN10017520" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H2B type 2-E" /protein_id="ELK06010.1" /db_xref="InterPro:IPR000558" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q16778" /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYK VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL LPGELAKHAVSEGTKAVTKYTSSK" gene <18244966..>18245355 /locus_tag="PAL_GLEAN10017521" mRNA <18244966..>18245355 /locus_tag="PAL_GLEAN10017521" /product="Histone H2A type 2-C" CDS 18244966..18245355 /locus_tag="PAL_GLEAN10017521" /note="GO_component: GO:0000786 - nucleosome [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006334 - nucleosome assembly [Evidence IEA]" /codon_start=1 /product="Histone H2A type 2-C" /protein_id="ELK06011.1" /db_xref="InterPro:IPR002119" /db_xref="InterPro:IPR007125" /db_xref="InterPro:IPR009072" /db_xref="UniProtKB/Swiss-Prot:Q64523" /translation="MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERV GAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVT IAQGGVLPNIQAVLLPKKTESHKAKSK" gene complement(<18248870..>18256908) /locus_tag="PAL_GLEAN10017522" mRNA complement(join(<18248870..18248989,18256804..>18256908)) /locus_tag="PAL_GLEAN10017522" /product="hypothetical protein" CDS complement(join(18248870..18248989,18256804..18256908)) /locus_tag="PAL_GLEAN10017522" /codon_start=1 /product="hypothetical protein" /protein_id="ELK06012.1" /translation="MSPLNFRLGPFYLRLGLGYRSSDQEHDARRSRRNAQLLHDANSY LQERDYVQEEGEEEKKGEFREEAEEVRIGF" assembly_gap 18252466..18252477 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18252730..18252751 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18254593..18255008 /estimated_length=416 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18257233..>18257643 /locus_tag="PAL_GLEAN10017523" mRNA <18257233..>18257643 /locus_tag="PAL_GLEAN10017523" /product="BolA-like protein 1" CDS 18257233..18257643 /locus_tag="PAL_GLEAN10017523" /codon_start=1 /product="BolA-like protein 1" /protein_id="ELK06013.1" /db_xref="InterPro:IPR002634" /db_xref="UniProtKB/Swiss-Prot:Q3T138" /translation="MLSGQLGRRLFPMAGRVCLSRGSAGSGAFGPVEAAIRTKLEQAL NPEVLELRNESSGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHAALSEELAGPVH ALAIQARTPAQWRENPQLDASPPCLGGSKKTRTP" gene complement(<18261746..>18270308) /locus_tag="PAL_GLEAN10017524" mRNA complement(join(<18261746..18261929,18262331..18262490, 18263629..18263835,18264649..18264782,18264996..18265160, 18265819..18265907,18266086..18266196,18266435..18266524, 18267107..18267240,18267355..18267506,18268297..18268477, 18269687..>18270308)) /locus_tag="PAL_GLEAN10017524" /product="Synaptic vesicle glycoprotein 2A" CDS complement(join(18261746..18261929,18262331..18262490, 18263629..18263835,18264649..18264782,18264996..18265160, 18265819..18265907,18266086..18266196,18266435..18266524, 18267107..18267240,18267355..18267506,18268297..18268477, 18269687..18270308)) /locus_tag="PAL_GLEAN10017524" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Synaptic vesicle glycoprotein 2A" /protein_id="ELK06014.1" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="UniProtKB/Swiss-Prot:Q7L0J3" /translation="MEEGFRDRAAFIRGAKDIAKEVKKHAAKKVVKGLDRVQDEYSRR SYSRFEEDDDDDDFPAPADGYYRGEGTQDEEEGGASSDATEGHDEEDEIYEGEYQGIP RAESGGKGERMADGAPLAGVRGGLGDGEGPAGGRGEAQRRKEREELAQQYEAILRECG HGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVG AFLWGGLADRLGRRQCLLISLSVNSIFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIV FSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWR VFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKRVHDTNMRAKGHPERVF SVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFGPEYRRITLMM MGVWFTMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRG GQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINSVFYNTDLFEYKF VNSRLVNSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGR LRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKR TTAFGFLNALCKLAAVLGISIFTSFVGITKAAPILFASAALALGSSLALKLPETRGQV LQ" gene complement(<18280773..>18284682) /locus_tag="PAL_GLEAN10017525" mRNA complement(join(<18280773..18280960,18281141..18281314, 18282749..18282955,18283270..18283812,18284056..18284184, 18284649..>18284682)) /locus_tag="PAL_GLEAN10017525" /product="Splicing factor 3B subunit 4" CDS complement(join(18280773..18280960,18281141..18281314, 18282749..18282955,18283270..18283812,18284056..18284184, 18284649..18284682)) /locus_tag="PAL_GLEAN10017525" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="Splicing factor 3B subunit 4" /protein_id="ELK06015.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q6AYL5" /translation="MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHM PKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANI FIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE AMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPP SAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAGGHGPP SAGSPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPP PRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPP PYGYQRGPLPPPRPTPRPPVPPRGPLRGPLPQ" assembly_gap 18284745..18284772 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18286075..>18292934) /locus_tag="PAL_GLEAN10017526" mRNA complement(join(<18286075..18286221,18286541..18286834, 18287250..18287435,18287691..18287864,18288162..18288328, 18288862..18288932,18289163..18289229,18289669..18289793, 18289876..18289964,18290106..18290193,18290456..18290591, 18290714..18290792,18291274..18291416,18291583..18291643, 18291872..18291993,18292427..18292517, 18292869..>18292934)) /locus_tag="PAL_GLEAN10017526" /product="Myotubularin-related protein 11" CDS complement(join(18286075..18286221,18286541..18286834, 18287250..18287435,18287691..18287864,18288162..18288328, 18288862..18288932,18289163..18289229,18289669..18289793, 18289876..18289964,18290106..18290193,18290456..18290591, 18290714..18290792,18291274..18291416,18291583..18291643, 18291872..18291993,18292427..18292517,18292869..18292934)) /locus_tag="PAL_GLEAN10017526" /note="GO_function: GO:0016791 - phosphatase activity [Evidence IEA]; GO_process: GO:0016311 - dephosphorylation [Evidence IEA]" /codon_start=1 /product="Myotubularin-related protein 11" /protein_id="ELK06016.1" /db_xref="InterPro:IPR010569" /db_xref="InterPro:IPR017906" /db_xref="InterPro:IPR022587" /db_xref="UniProtKB/Swiss-Prot:A4FU01" /translation="MWWGGRGQSFDIAPQKEQPEMGLSGPKSVQEGGIPEPRSRQLGS RLASGCLPGEQTLAWAPGVRKGLEPELPGTLICTNLRVTFQPCGWRRSQDTPLSSEYD FALVNIGRLEAVSGLSRVQLHRPGALLKFIPEEILIHGRDFRLLRIGFEAGGLEPQAF QVTMAIVQARAQSSRAQPYTGITLSKAGQSSGSRKPSIPLLETSEDWETERKKQGASS WRVSLVNERFDVATSLPRYFWVPNRTLDSEVRRAFSHFHQGRGPRLCWHHPGGSDLLR CGGFYAASDPNKEDIRAAESMLQAGHADVVLVDAVDELPSLADVRLAHLRLRALCLPD SSVAEDKWLSALEGTRWLDYVRSCLRKASDISVLVTSRVRSVVLQERGDRDFNGLLSS LVQLLSAPEARTLLGFQSLVQREWVAAGHPFLTRLGGTRVSEKAPVFLLFLDCVWQLL QQFPAEFEFSEFFLLALHDSVRVPDTLTFLRDTPWERGKQSGQFNSYTQVYTPGYSQP AAGNSVNPQLSVWDWDLRYSNEQILQFHNLGYDPEHCPDSWLLPRQQSSFMVPGPPSS VWLFSRGALTPLNQLCPWRDSPSLLAVSSRWLPRPAISSESLADQEWGLPSYWGACPL PSGLLLPGYLGPQIRLWRRCYLRGRPEVQMGLSAPTISGLQDELSHLQELLRKWTPRI SPEDHSKNRDPNTILSQSH" assembly_gap 18298217..18298385 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18299380..>18320174) /locus_tag="PAL_GLEAN10017527" mRNA complement(join(<18299380..18300780,18301537..18301621, 18302474..18302588,18303178..18303327,18303654..18303781, 18305404..18305516,18311927..18312054,18312975..18313076, 18314481..18314708,18316571..18316759,18319773..18319923, 18320106..>18320174)) /locus_tag="PAL_GLEAN10017527" /product="OTU domain-containing protein 7B" CDS complement(join(18299380..18300780,18301537..18301621, 18302474..18302588,18303178..18303327,18303654..18303781, 18305404..18305516,18311927..18312054,18312975..18313076, 18314481..18314708,18316571..18316759,18319773..18319923, 18320106..18320174)) /locus_tag="PAL_GLEAN10017527" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="OTU domain-containing protein 7B" /protein_id="ELK06017.1" /db_xref="InterPro:IPR002653" /db_xref="InterPro:IPR003323" /db_xref="InterPro:IPR009060" /db_xref="UniProtKB/Swiss-Prot:Q6GQQ9" /translation="MSGKVTLQKGRVKRYLEWYYGFVVETPNFDLCPPYISCLRVRSD HMTPDMDAVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGNLPSPFS EGSGGSRTPEKGFSDRESARPPRPTLQRQDDIVQEKRLSRGISHASSSIVSLARSHVS SNGGGGGSSEHPLEMPVCAFQLPDLTVYSEDFRSFIERDLIEQSMLVALEQAGRLNWW VSVDPTCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGAEKEALR RRWRWQQTQQNKESGLVYTEDEWQKEWNELIKLASSEPRMHLGANGANCGGVESSEEP VYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPASQCHR SPLVLAYDQAHFSALVSMEQKESAKEQAVIPLTDSEHKLLPLHFAVDPGKGWEWGRDD NDNVRLASVILSLEVKLHLLHSYMNVKWVPVSSDAQRPLSETSHFQDTVHRGVTALFH VAIPPAMALGSPMSQVEGTEVPGPSPDPEQRDNRQRCSCFSQAPLAQPESPTASAGDE ARSTPESGESDKESVGSSSASNEGGRRKEKSKRDREKDKKRADSVANKLGSFGKTLGS KLKKNMGGLMHSKGSRPGGVGTGSGTSSGAETLEKRKKSSLKSWKGGKEEAAGDGPVS EKPSAESVGNGGSKYSQEVMQSLSIMRTAMQGEGKFIFVGTLKMGHRQQYQEEMIQRY LSDAEERFLAEQKQKEAERKIMNGGVGSGPPPAKKPEPDGGEEPLTAPLVESKALAYS AGYPGGFTIPRPSGGGVHCQEPRRQLAGGPCGGGLPPYATFPRQCPPGRPSPHQDSSP APELGSHPRDGVHRGSLLPPAFRVAEPYSNGYREPPEPDGWAGGPRGLPPTQTKCKQP NCSFYGHPETSNFCSCCYREELRRREREPGGELLVHRF" assembly_gap 18303442..18303466 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18335754..18335781 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18347065..18347617 /estimated_length=553 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18355137..18355223 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18357552..18357574 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18380288..18380430 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18380520..>18429004 /locus_tag="PAL_GLEAN10017529" mRNA join(<18380520..18380612,18381238..18381372, 18383616..18383676,18386087..18386166,18387434..18387502, 18387616..18387753,18388175..18388285,18390455..18390589, 18390961..18391074,18391488..18391655,18399549..18399707, 18399913..18400020,18400828..18400949,18410827..18410958, 18428917..>18429004) /locus_tag="PAL_GLEAN10017529" /product="Vacuolar protein sorting-associated protein 45" CDS join(18380520..18380612,18381238..18381372, 18383616..18383676,18386087..18386166,18387434..18387502, 18387616..18387753,18388175..18388285,18390455..18390589, 18390961..18391074,18391488..18391655,18399549..18399707, 18399913..18400020,18400828..18400949,18410827..18410958, 18428917..18429004) /locus_tag="PAL_GLEAN10017529" /note="GO_process: GO:0006904 - vesicle docking involved in exocytosis [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="Vacuolar protein sorting-associated protein 45" /protein_id="ELK06018.1" /db_xref="InterPro:IPR001619" /db_xref="UniProtKB/Swiss-Prot:O08700" /translation="MNVVFAVKQYVSKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEI LQKEVYLFERIDSPNREIMKHLKAICFLRPTKENVDHLIQELRRPKYSIYFIYFSNVI SKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQ GLTALLLSLKKCPMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDR CDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNM YLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTV VGELSRLVSERNLLEVSEVEQELACQNDHSSALQNVKRLLQNPKVTEFDAARLVMLYA LHYERHSSNSLPGLIMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITK QFLKGLKGIENVYTQHQPFLHETLDHLIKGKLKENLYPYLGPSTLRDRPQDIIVFVIG GATYEEALTVYNLNRATPGVRTVLGGTTVHNTESFLEEVLASGLHSRSKESSQVTARS ASRR" assembly_gap 18423597..18423612 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18433353..18434054 /estimated_length=702 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18434530..>18442155 /locus_tag="PAL_GLEAN10017530" mRNA join(<18434530..18434688,18439037..18439177, 18439924..18440028,18440342..18440443,18441451..>18442155) /locus_tag="PAL_GLEAN10017530" /product="Pleckstrin like proteiny domain-containing family O member 1" CDS join(<18434530..18434688,18439037..18439177, 18439924..18440028,18440342..18440443,18441451..18442155) /locus_tag="PAL_GLEAN10017530" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Pleckstrin like proteiny domain-containing family O member 1" /protein_id="ELK06019.1" /db_xref="InterPro:IPR001849" /db_xref="UniProtKB/Swiss-Prot:A4IFK0" /translation="PPRQGPQDGNHQSAPPEKVGWVRKFCGKGIFREIWKNRYVVLKG DQLYISDKEVKDEKNIQEVFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSKQPGNTAP NLIFLAVSPEEKESWISALSSAITRAKNRVLDEVTVEEDSYLAHPTRDRAKIQHSRRP PTRGHLMAVASTSTSDGMLTLDLIQEEDPSPEEPTSCAESFRVDLDKSVAQLAGSRRR ADSDRIQPSADRAGGLPRPWQKPDKGATYTPQAPKKLTPAEKGRCASLEEILSQRDTA PACTLQLRAEDPPTLIPPHPGQLSRIQDLVARKLEKTQELLAEVQGLGDGKRKAKDPP RSPPDSESEQLLLETERLLGEASSNWSQAKRVLQEVRELRDLYRQMDLQTPDPHLRQT TQHSQYRKSLM" assembly_gap 18436959..18437021 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18477866..>18487592) /locus_tag="PAL_GLEAN10017531" mRNA complement(join(<18477866..18477936,18478467..18478521, 18481434..18481606,18482693..18482858,18483599..18483721, 18484556..18484705,18487539..>18487592)) /locus_tag="PAL_GLEAN10017531" /product="Acidic leucine-rich nuclear phosphoprotein 32 family member E" CDS complement(join(18477866..18477936,18478467..18478521, 18481434..18481606,18482693..18482858,18483599..18483721, 18484556..18484705,18487539..18487592)) /locus_tag="PAL_GLEAN10017531" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Acidic leucine-rich nuclear phosphoprotein 32 family member E" /protein_id="ELK06020.1" /db_xref="InterPro:IPR001611" /db_xref="UniProtKB/Swiss-Prot:P97822" /translation="MEMKKRINLELRNRAPEEVTELVLDNCLCVNGEIEGLNDTFKKL EFLSMANVELSSLARLPSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKD LSTVEALQNLKNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQDDNEAPDSEE EDDEDGDEDDEDEEEDEAGPPEGFEEEEEEEEDDDDEDEPGSELGEGEEEVGLSYLMK EEIQDEEDDDDYVEEGEEEEEEEEEGLRGEKRKRDAEDDGEEEDD" assembly_gap 18486952..18487192 /estimated_length=241 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18489369..18489383 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18501283..18501457 /estimated_length=175 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18503278..>18508953 /locus_tag="PAL_GLEAN10017532" mRNA join(<18503278..18503332,18505281..18505304, 18506154..18506333,18506718..18506860,18507077..18507172, 18507359..18507425,18507615..18507772,18507878..18507998, 18508931..>18508953) /locus_tag="PAL_GLEAN10017532" /product="Carbonic anhydrase 14" CDS join(18503278..18503332,18505281..18505304, 18506154..18506333,18506718..18506860,18507077..18507172, 18507359..18507425,18507615..18507772,18507878..18507998, 18508931..18508953) /locus_tag="PAL_GLEAN10017532" /codon_start=1 /product="Carbonic anhydrase 14" /protein_id="ELK06021.1" /db_xref="InterPro:IPR001148" /db_xref="UniProtKB/Swiss-Prot:Q9ULX7" /translation="MMFFMLLLEVIWILAADGGQHHWTYEGPHGQHHWQASYPECGSH AQSPINIQTDRVTFDPELPAVQPHGYDQPGLKPLDLHNNGHTVQLSLPPSLYLEGLPR KYVAAQLHLHWGQKGSPGGSEHQINSEATAAELHIVHYDSESYHALSEAAQRPQGLAV LGILIEVGETKNPAYEHILSHLHKIRYKGQNTSVPPFDVGGLLPPLRAQFFRYNGSLT TPPCYQSVLWTVFSRRAQISLEQLEKLQETLFSSETDPSELLVQNYRAPQPLNQRPVF ASFIQDMDKIFP" gene complement(<18510069..>18512657) /locus_tag="PAL_GLEAN10017533" mRNA complement(join(<18510069..18510133,18510459..18510582, 18510976..18511103,18511260..18511382,18511614..18511687, 18511842..18512012,18512545..>18512657)) /locus_tag="PAL_GLEAN10017533" /product="Gamma-secretase subunit APH-1A" CDS complement(join(18510069..18510133,18510459..18510582, 18510976..18511103,18511260..18511382,18511614..18511687, 18511842..18512012,18512545..18512657)) /locus_tag="PAL_GLEAN10017533" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0016485 - protein processing [Evidence IEA]; GO_process: GO:0043085 - positive regulation of catalytic activity [Evidence IEA]" /codon_start=1 /product="Gamma-secretase subunit APH-1A" /protein_id="ELK06022.1" /db_xref="InterPro:IPR009294" /db_xref="UniProtKB/Swiss-Prot:Q8BVF7" /translation="MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLV SLLLASVVWFILVHVTDPSDSRLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLA SLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTS AFLTAAIILLHTFWGVVFFDACERRRYWTLGLVVGSHLLTSGLTFLNPWYEASLLPIC AVTVSMGLWAFITAGGSLQSIQRSLSCRRQEDSQVMVYSALRIPPED" assembly_gap 18511720..18511758 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18514462..18514493 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18515235..>18526287 /locus_tag="PAL_GLEAN10017534" mRNA join(<18515235..18515280,18523532..18523827, 18524003..18524078,18524341..18524419,18524544..18524655, 18525766..>18526287) /locus_tag="PAL_GLEAN10017534" /product="hypothetical protein" CDS join(18515235..18515280,18523532..18523827, 18524003..18524078,18524341..18524419,18524544..18524655, 18525766..18526287) /locus_tag="PAL_GLEAN10017534" /codon_start=1 /product="hypothetical protein" /protein_id="ELK06023.1" /db_xref="UniProtKB/Swiss-Prot:Q8N365" /translation="MEVLFAAILAVPLILVNSDFGFPSDSEGEDKGAHGPRPDTVGQR EDSRPSPGPIRRRQRPKVSGNRHTASHSAQRGLASPMAGCGVKRSRDGELETSLNVQG CTTEGDLLFARKCKELQGFIRPLTDLLNGLKMGRFERGLSSFQQSVAMDRIQRIVGVL QKPQMGERYLGTLLQVEGMLKTWFPHIAAQKSSLGSSRHQLTKHFPSRHSYPAASPAP PVEKLDQTQLGHLLLKPKRPWHLTEWPAMNPTWIHTTPICNPCLSSPGSVSFGSGPLG TGTSIGVILFLQHGEQPFTHSAPTTPVPPTTESPVIPGDPKKLSGEGPRCHSLPVTLP SDWTCTLFPPNLTPTARERTMGHPKQMRSHPPGALDVHPLSP" assembly_gap 18517426..18517445 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18530869..>18540376 /locus_tag="PAL_GLEAN10017535" mRNA join(<18530869..18530951,18540196..>18540376) /locus_tag="PAL_GLEAN10017535" /product="28S ribosomal protein S21, mitochondrial" CDS join(18530869..18530951,18540196..18540376) /locus_tag="PAL_GLEAN10017535" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="28S ribosomal protein S21, mitochondrial" /protein_id="ELK06024.1" /db_xref="InterPro:IPR001911" /db_xref="UniProtKB/Swiss-Prot:P82920" /translation="MAKHLKFIARTVMVQEGNMEGAYRTLNRILTMDGLIEDIKRRRY YEKPCRRRQRESYESCRRIYNMEMARKVNFLMRKNRADPWQGC" gene <18548486..>18563585 /locus_tag="PAL_GLEAN10017536" mRNA join(<18548486..18548630,18549299..18549429, 18551377..18551523,18552879..18552962,18553265..18553485, 18554087..18554393,18555064..18555230,18556181..18556260, 18557476..18557619,18558310..18558409,18558742..18558855, 18559977..18560095,18560380..18560463,18561506..18561567, 18563439..>18563585) /locus_tag="PAL_GLEAN10017536" /product="U4/U6 small nuclear ribonucleoprotein Prp3" CDS join(18548486..18548630,18549299..18549429, 18551377..18551523,18552879..18552962,18553265..18553485, 18554087..18554393,18555064..18555230,18556181..18556260, 18557476..18557619,18558310..18558409,18558742..18558855, 18559977..18560095,18560380..18560463,18561506..18561567, 18563439..18563585) /locus_tag="PAL_GLEAN10017536" /note="GO_process: GO:0006397 - mRNA processing [Evidence IEA]" /codon_start=1 /product="U4/U6 small nuclear ribonucleoprotein Prp3" /protein_id="ELK06025.1" /db_xref="InterPro:IPR002483" /db_xref="InterPro:IPR010541" /db_xref="InterPro:IPR013881" /db_xref="UniProtKB/Swiss-Prot:O43395" /translation="MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDK KKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEIS KESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQL SFISPPTPQPKTTSSSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLA LKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTH RMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGK FEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDS YIIPNGFDLTEQNPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRR QTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQ KAHEEANAARKLTAEQRKVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFKIEANAGQ LYLTGVVVLHKDVNVVVVEGGPKSQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAV KKTNKCVLVWEGTAKDRSFGDMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLEST D" assembly_gap 18558519..18558686 /estimated_length=168 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18573783..>18635987 /locus_tag="PAL_GLEAN10017537" mRNA join(<18573783..18573987,18600521..18600650, 18617484..18617584,18618425..18618502,18619786..18619838, 18620395..18620521,18621923..18622098,18627848..18628130, 18629297..18629557,18631033..18631233,18633355..>18635987) /locus_tag="PAL_GLEAN10017537" /product="Regulation of nuclear pre-mRNA domain-containing protein 2" CDS join(18573783..18573987,18600521..18600650, 18617484..18617584,18618425..18618502,18619786..18619838, 18620395..18620521,18621923..18622098,18627848..18628130, 18629297..18629557,18631033..18631233,18633355..18635987) /locus_tag="PAL_GLEAN10017537" /codon_start=1 /product="Regulation of nuclear pre-mRNA domain-containing protein 2" /protein_id="ELK06026.1" /db_xref="InterPro:IPR006569" /db_xref="InterPro:IPR006903" /db_xref="InterPro:IPR008942" /db_xref="UniProtKB/Swiss-Prot:Q5VT52" /translation="MAAGGGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGL SSWCIENKKHHTTIVYHWMKWLRRSAYPHRLNLFYLANDVIQNCKRKNAIIFRESFAD VLPEAAALVKDPSVSKSIERIFKIWEDRNVYPEEMIMALREALSTTFKTQKQLKENLN KQPNKQWKKSQTSTNPKAALKSKIVAEFRSQALIEELLLYKRSEDQIELKEKQLSTMR VDVCSTETLKCLKDKTGGKKFSKEFEEASAKLEEFVNGLDKQVKNGPSLTEALENAGI FYEAQYKEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESPVPSPSMDAPSPTGS ESPFQGMGGEESQSPAVESEKSATPEPATDNRDVEDMELSDVEDDGSKIIVEDRKEKP VEKAAASTSAPTKPTESVPKTSSCTPVPAPMTATPPLPKPVNTALLSPSPALALPNLA NVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPASPGNLSSGLKTPAPATTASHNPL ANILSKVEITPESILSALSKTQTQSAPALQGLSSLLQSVTGNPVPASEAASQSTAVSP ANTTVSSVKGRSLPSGAQPFIPKSFSYSPNSSVSEVSSTSASKVSLGQSPGLPSTTFK LPSNSLGFTGAHNASSAAPPSEVAMCQSSEVSKPKLESESTSPSLEMKIHNFLKGNPG FSGLNLNIPILSSLGSSAPAESHPSDFQRGPTSTSVDNIDGTPVRDERSGTPTQDEMM DKPTSSSVDTMSLLSKIISPGSSTPSSTRSPPPGREESYPRDLSNAVSTYRPFGLGSD SPYKQPADGMERPSSLMDSAQEKFYPDTSFQEDEDYRDFEYSGPPPSAVMNLEKKPAK SILKSSKLSDTAEYQPILSSYSHRAQGFGVQSAFPPAVRALLDSTEDCDRLSASPGLL GAFGLRGNEPGSNRSPSPSKNDSFFAPDSNHNSLSQAAPGHLSLPQKQYPDSPHPGPQ RPLFSPQNTLAAPAGHAPTSGVEKVLAATISTTSTIEFKNMLKNASRKPSEDKHFGQA PSKGASGDGVGLSNLAQPSLTATDQQQQEEHFRIETRVSSSCLDLPDSTEEKGAPIET LGYHHAPHRRVSGEPIQTVESVRVPGKGNRGHGREASRVGWFDLSTSGSSFDNGPSSA SELASLGGGGSGGLAGFKAAPYKERAPQFQESVGSFRSNSFNSTFEHHLPPAPLEHGT PFPREPVGPASAPPAPAKDHGGVFPREAAAHLPSVDLXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXAASPWVPRTETPSTGAV" assembly_gap 18574929..18574939 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18616631..18616682 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18621357..18621404 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18624026..18624051 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18635464..18635931 /estimated_length=468 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18642354..18642387 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18645071..>18655141 /locus_tag="PAL_GLEAN10017538" mRNA join(<18645071..18645145,18645445..18645641, 18645945..18646068,18646895..18647019,18647810..18647927, 18648025..18648089,18648347..18648425,18649467..18649613, 18649773..18649871,18650158..18650375,18650778..18650940, 18651152..18651289,18651460..18651537,18652803..18652903, 18653157..18653258,18653423..18653495,18654035..18654149, 18654993..>18655141) /locus_tag="PAL_GLEAN10017538" /product="Threonyl-tRNA synthetase, mitochondrial" CDS join(18645071..18645145,18645445..18645641, 18645945..18646068,18646895..18647019,18647810..18647927, 18648025..18648089,18648347..18648425,18649467..18649613, 18649773..18649871,18650158..18650375,18650778..18650940, 18651152..18651289,18651460..18651537,18652803..18652903, 18653157..18653258,18653423..18653495,18654035..18654149, 18654993..18655141) /locus_tag="PAL_GLEAN10017538" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO_function: GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016876 - ligase activity, forming aminoacyl-tRNA and related compounds [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO_process: GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]; GO_process: GO:0043039 - tRNA aminoacylation [Evidence IEA]" /codon_start=1 /product="Threonyl-tRNA synthetase, mitochondrial" /protein_id="ELK06027.1" /db_xref="InterPro:IPR002314" /db_xref="InterPro:IPR002320" /db_xref="InterPro:IPR004095" /db_xref="InterPro:IPR004154" /db_xref="InterPro:IPR006195" /db_xref="InterPro:IPR012676" /db_xref="InterPro:IPR012947" /db_xref="InterPro:IPR018163" /db_xref="UniProtKB/Swiss-Prot:Q9BW92" /translation="MGLYQRWRRFQLPGLQACGLHTVREAAVPTPPHWLVERLGLFEE LWAAQAKRLASVAQKEHRTIKISLPGGQKVEAVAWNTTPYQLARQISSTLADTAVAAQ VNGEPYDLERPLETDSDLRFLTFDSTEGKAVFWHSSTHVLGAAAEQLLGAILCRGPST ESGFYHDFFLGKDRSVRGSELPVLERVCQELAAAALPFRRLEASQDQLRQLFKDNPFK LRLIEEKVTGPTATVYGCGTLVDLCRGPHLRHTGQIGGLKLLTNSSSLGRSSGGPETL QRVSGIAFPTAEQLRAWEEQREEAELRDHRRLGKEQELFFFHELSPGSCFFLPRGTRV YNALVSLIRAEYTRRGFSEVKTPTLFSTKLWELSGHWEHYQEDMFALQSPGSNRPASS QGDHCSGHPTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGSLGG LTRLRCFQQDDAHIFCAPDQLDAEIRGCLDFLRSVYAVLGFSFRLALSTRPTGFLGEP RLWDQAEQVLQRALEEFGEPWDLSPGDGAFYGPKIDVYLQDALGRPHQCGTIQLDFQL PLRFDLQYKGQAGALERPVLIHRAVLGSVERMLAVLAESCGGKWPLWLSPFQVVVIPV GTEQEEYAREAQQSLQAAGLVGDLDADCGLTLSRRVRRAQLANYNFQFVVGPREQSKG TVNIRTRDNRRLGERDLPEAVRRLLELQSARTPNAEEIF" gene <18655930..>18661133 /locus_tag="PAL_GLEAN10017539" mRNA join(<18655930..18655999,18657209..18657259, 18657339..18657440,18657560..18657640,18657748..18657894, 18658536..18658858,18659124..18659498,18660005..18660225, 18660382..18660469,18660903..>18661133) /locus_tag="PAL_GLEAN10017539" /product="Extracellular matrix protein 1" CDS join(18655930..18655999,18657209..18657259, 18657339..18657440,18657560..18657640,18657748..18657894, 18658536..18658858,18659124..18659498,18660005..18660225, 18660382..18660469,18660903..18661133) /locus_tag="PAL_GLEAN10017539" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_component: GO:0005615 - extracellular space [Evidence IEA]" /codon_start=1 /product="Extracellular matrix protein 1" /protein_id="ELK06028.1" /db_xref="InterPro:IPR008605" /db_xref="InterPro:IPR020858" /db_xref="UniProtKB/Swiss-Prot:Q16610" /translation="MGTMPRAALVLACLAVASVASEEASKASGQRELGPEYLQEVGYA APPSPPRTRALPVDHPDTPQHGPQFEAQSEVQPPPSQEAGPVQEEELPPPQLSVKKEG SHAQDHLHPPEAIPLQKGIPLQKEIPLQKEIPLQKEMPASQLPIEQKEQKPASSTRHV SPEPESSNSAQQCPQGRPRGGWGHHLDGFPPGRPCPDNLDQICLPTRQHVVYGPWNLP QSGHSHLSRQGDTLNMLETGYSRCCRCQSYMNRLDCAKLVWEDAMTQFCEAEFSVKTR PHWCCKRQGEARLSCFQEEAPRPHYKPRACSGPPPVVSSGPELPFPPGEPTLDNIKNI CHLRRFRSVPRNLPATDPIQRQLQALTRLEGELQRCCRLGSNHTCAWKAWEETLDRYC DQEQAIKTHHHSCCHHPPSPARDDCFARRAPFPNYDRDILTIDLSRVTPNIMGYLCGN QRVITKHKHIPGLIRNITSRCCDLPAPEQACCAEEEKAAFIDDLCGPRRNFWRDSAFC CKLNLGDEQTNCFNNNYLRNVALVAGDFGETKDQGEQKPTRGTNTSPTPESKEE" assembly_gap 18671599..18671826 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18676147..>18698266 /locus_tag="PAL_GLEAN10017541" mRNA join(<18676147..18676247,18677067..18677257, 18693023..18693154,18693877..18694013,18694381..18694585, 18694773..18694945,18695048..18695159,18695573..18695702, 18696010..18696214,18696527..18696703,18697077..18697283, 18697384..18697563,18697855..18697981,18698130..>18698266) /locus_tag="PAL_GLEAN10017541" /product="ADAMTS-like protein 4" CDS join(18676147..18676247,18677067..18677257, 18693023..18693154,18693877..18694013,18694381..18694585, 18694773..18694945,18695048..18695159,18695573..18695702, 18696010..18696214,18696527..18696703,18697077..18697283, 18697384..18697563,18697855..18697981,18698130..18698266) /locus_tag="PAL_GLEAN10017541" /note="GO_component: GO:0005578 - proteinaceous extracellular matrix [Evidence IEA]; GO_component: GO:0031012 - extracellular matrix [Evidence IEA]; GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0008237 - metallopeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="ADAMTS-like protein 4" /protein_id="ELK06029.1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR010294" /db_xref="InterPro:IPR010909" /db_xref="InterPro:IPR013273" /db_xref="UniProtKB/Swiss-Prot:Q6UY14" /translation="MDCSKLGTLPPGCFLSWSLAKKRKVDTESWFYSQYIQDPRFDEG GPLQLVPPTKPSQPTKHLHTYHVCLTVDLRVKNWGAENERLALRPLRPRVPFPTLTPL YPPPQPCPPEQPDPRALQCSAFDSQEFMGQLYQWEPFTEVQGFQRCELNCRPRGFRFY VRHTEKVQDGTLCQPGALDICVAGRCLSPGCDGILGSGRRPDGCGVCGGDDSTCRLIS GNLTDRGGPLGYQKILRIPAGASRLQVAQFRPSSNYLAVRGPGGRSIINGNWAVDPPG SYAAGGTVFQYNRPPREEGAGESLSAEGPTTQPVDVYMIFQEENPGVFYQYVISSPPP NLETPTPEPRVPQLQPGVWRPVYLCVSRESGEELDERSCAVGTRPPGSPEPCHGPPCP PTWEAGDWTSCSRSCGPGTQHRQLRCRQEFGAGGSSVPLERCGHLPRPNITQPCQLRL CGHWEVRSAWSQCAVRCGRGQRSRQVRCVGSNGDEVSERECATGPPRPPSREACDMGP CTTAWFHSDWSAKCSAECGTGIQRRSVVCLGSGEAAGAGPEGAGAGAGEQSCAPGSRP PDMRACSPGPCEMTWCWYAGPWAECSADCGPGTQRRDIICVSKLGAEFNVTSPSNCSH LPRPPALQPCQGQDCQDRWFSTPWSPGGVQTREVQCLTANQTLSVRCPLHLRPSRKRP CNSQPCSQRPDDQCKDSSPHCPLVVQARLCVYPYYTATCCRSCAHVLERAPPEPA" assembly_gap 18688231..18688779 /estimated_length=549 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18696738..18696809 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18710960..>18712568) /locus_tag="PAL_GLEAN10017542" mRNA complement(join(<18710960..18711076,18711622..18711869, 18712208..>18712568)) /locus_tag="PAL_GLEAN10017542" /product="Induced myeloid leukemia cell differentiation protein Mcl-1 like protein" CDS complement(join(18710960..18711076,18711622..18711869, 18712208..18712568)) /locus_tag="PAL_GLEAN10017542" /note="GO_process: GO:0042981 - regulation of apoptosis [Evidence IEA]" /codon_start=1 /product="Induced myeloid leukemia cell differentiation protein Mcl-1 like protein" /protein_id="ELK06030.1" /db_xref="InterPro:IPR000712" /db_xref="InterPro:IPR002475" /db_xref="InterPro:IPR013281" /db_xref="UniProtKB/Swiss-Prot:Q7YRZ9" /translation="MEVPAADAIMSPEEELDGYEPEPLGKRPAVLPLLELVGEASNGP GTDGSLPSTPPPSEEEEEDELYRQSLQIISRYLREQATGAKDAKPLGGPAATSRKALE TLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMVHVFSDGVTNWGRIVTLIS FGAFVAKHLKSINQESCIEPLAESITDILVRTKRDWLVKQRGWDGFVEFFHVEDLEGG IRNVLLAFAGVAGVGAGLAYLIR" assembly_gap 18712642..18713178 /estimated_length=537 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18728787..18728822 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18732568..>18735861) /locus_tag="PAL_GLEAN10017543" mRNA complement(join(<18732568..18732738,18733998..18734123, 18735805..>18735861)) /locus_tag="PAL_GLEAN10017543" /product="Alpha-endosulfine" CDS complement(join(18732568..18732738,18733998..18734123, 18735805..18735861)) /locus_tag="PAL_GLEAN10017543" /codon_start=1 /product="Alpha-endosulfine" /protein_id="ELK06031.1" /db_xref="InterPro:IPR006760" /db_xref="UniProtKB/Swiss-Prot:O43768" /translation="MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSL GQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQD LPQRKSSLVTSKLAG" gene complement(<18749598..>18789885) /locus_tag="PAL_GLEAN10017544" mRNA complement(join(<18749598..18750025,18756843..18756957, 18758115..18758246,18768976..18769170,18776014..18776097, 18776790..18776866,18778485..18778742,18779918..18780069, 18784722..18784785,18787915..18788133, 18789606..>18789885)) /locus_tag="PAL_GLEAN10017544" /product="Golgi phosphoprotein 3-like protein" CDS complement(join(18749598..18750025,18756843..18756957, 18758115..18758246,18768976..18769170,18776014..18776097, 18776790..18776866,18778485..18778742,18779918..18780069, 18784722..18784785,18787915..18788133,18789606..18789885)) /locus_tag="PAL_GLEAN10017544" /note="GO_process: GO:0007067 - mitosis [Evidence IEA]" /codon_start=1 /product="Golgi phosphoprotein 3-like protein" /protein_id="ELK06032.1" /db_xref="InterPro:IPR003511" /db_xref="InterPro:IPR008628" /db_xref="UniProtKB/Swiss-Prot:A6H7F6" /translation="MTLDKSVLQKQHPMNGHDCERRKALSERWSVLHPASGPSGSGNF GGGRGGGFGGSDSFGCGGNFSGRGGFGGSHGGGGHGGSGGGYNRVSNDGGIGLFQVRH GGQALGVPGVPCAALGGKGDLDRGQKAPVAPPRATVDGRRMRIGQSACCVVLLSSSPA PVPQTLHLCVKILREDKNCPGSTQLVKCKNQSSESSMSSADTKKASILLIRKIYVLMQ NLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKDGDCEGVIFEGEPMYLNVGEVPTPFH TFKVKVTTEKERMENIDSAILSPKPLKTPLQKILMDKDDGDDEQEHYIKPNLICEEDE IMRSKESPDLSVSHSQVEQLVSKTSELDVSESKTRSGKIFQNKMKQLRMTTLTHRARR TEVGRNSEKKVESEGDANQDRTPDNEDSGDSKDIRLTLMEEVLLLGLKDKEGYTSFWN DCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLDETLKHI KATEPTETVQTWIELLTGETWNPFKLQYQLRNVRERIAKNLVEKGILTTEKQNFLLFD MTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMDKRTLALLVLAHSSDVLENVFSSL TDDRYDVAMNRAKDLVELDPEVEGTKHSATEMIWAVLAAFNKS" assembly_gap 18763927..18763947 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18776930..18776995 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18795940..>18806872) /locus_tag="PAL_GLEAN10017545" mRNA complement(join(<18795940..18796039,18797689..18797791, 18798623..18798788,18799826..18800053,18801504..18801653, 18802438..18802560,18806747..>18806872)) /locus_tag="PAL_GLEAN10017545" /product="Cathepsin S" CDS complement(join(18795940..18796039,18797689..18797791, 18798623..18798788,18799826..18800053,18801504..18801653, 18802438..18802560,18806747..18806872)) /locus_tag="PAL_GLEAN10017545" /note="GO_function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Cathepsin S" /protein_id="ELK06033.1" /db_xref="InterPro:IPR000668" /db_xref="InterPro:IPR013201" /db_xref="UniProtKB/Swiss-Prot:Q8HY81" /translation="MKWLACVLLGCSAAVAQLQRDPTLDRHWDLWKKTYSKHYREKIE EVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVISLMGSLTVPSQWQ RNVTYKSNPNQKLPDSLDWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLV SLSAQNLVDCSTEKYSNKGCNGGFMTSAFQYIIDNNGIDSEASYPYKAQDGKCQYDSK FRAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDQSCTLKV NHGVLVVGYGNLDGKDYWLVKNSWGLNFGDKGYIRMARNSGNHCGIASYPSYPEI" assembly_gap 18803683..18804001 /estimated_length=319 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18805819..18806250 /estimated_length=432 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18820170..>18827853) /locus_tag="PAL_GLEAN10017546" mRNA complement(join(<18820170..18820269,18822111..18822216, 18822481..18822646,18825987..18826205,18826944..18827099, 18827184..18827306,18827731..>18827853)) /locus_tag="PAL_GLEAN10017546" /product="Cathepsin K" CDS complement(join(18820170..18820269,18822111..18822216, 18822481..18822646,18825987..18826205,18826944..18827099, 18827184..18827306,18827731..18827853)) /locus_tag="PAL_GLEAN10017546" /note="GO_function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Cathepsin K" /protein_id="ELK06034.1" /db_xref="InterPro:IPR000668" /db_xref="InterPro:IPR013201" /db_xref="UniProtKB/Swiss-Prot:Q3ZKN1" /translation="MWGLKVLLLLPAVSFALYPEEILDTHWELWKKSYGKQYDSKVDE TSRRLIWEKNLKHISIHNLEAALGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSR SNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKL LNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGK AAKCRGYKEIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLN HAVLAVGYGIQKGRKHWIIKNSWGENWGNKGYVLMARNKNNACGIANLASFPRM" assembly_gap 18827599..18827651 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18831911..18832137 /estimated_length=227 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18834047..>18896310 /locus_tag="PAL_GLEAN10017548" mRNA join(<18834047..18834184,18896074..>18896310) /locus_tag="PAL_GLEAN10017548" /product="hypothetical protein" CDS join(18834047..18834184,18896074..18896310) /locus_tag="PAL_GLEAN10017548" /note="GO_component: GO:0031224 - intrinsic to membrane [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="ELK06035.1" /db_xref="InterPro:IPR020066" /translation="MAVEHVAHWNLNDDEAAGPATVARLPPPLLSASGTVLWSARPAQ ELEYDKSEGIPEEVTTAGQAQEVCAPMDEFSSVDVDKGFAIAFVVFLFLFLMGMIFRC AKLVTNPYKADFTTTEPSQPQS" assembly_gap 18842531..18842562 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18855317..18855331 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18874126..18874183 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18874788..18874835 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 18896723..18896734 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18903126..>18923794 /locus_tag="PAL_GLEAN10017549" mRNA join(<18903126..18903385,18903947..18904098, 18908480..18908514,18908943..18909042,18909674..18909799, 18909968..18910169,18910715..18910788,18911667..18911857, 18912576..18912705,18913371..18913536,18913628..18913786, 18914532..18915155,18915586..18915702,18919922..18920091, 18920659..18921287,18921878..18921906,18922016..18922148, 18922414..18922579,18922936..18923147,18923402..18923490, 18923677..>18923794) /locus_tag="PAL_GLEAN10017549" /product="Histone-lysine N-methyltransferase SETDB1" CDS join(18903126..18903385,18903947..18904098, 18908480..18908514,18908943..18909042,18909674..18909799, 18909968..18910169,18910715..18910788,18911667..18911857, 18912576..18912705,18913371..18913536,18913628..18913786, 18914532..18915155,18915586..18915702,18919922..18920091, 18920659..18921287,18921878..18921906,18922016..18922148, 18922414..18922579,18922936..18923147,18923402..18923490, 18923677..18923794) /locus_tag="PAL_GLEAN10017549" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0018024 - histone-lysine N-methyltransferase activity [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]" /codon_start=1 /product="Histone-lysine N-methyltransferase SETDB1" /protein_id="ELK06036.1" /db_xref="InterPro:IPR001214" /db_xref="InterPro:IPR001739" /db_xref="InterPro:IPR002999" /db_xref="InterPro:IPR003606" /db_xref="InterPro:IPR003616" /db_xref="InterPro:IPR007728" /db_xref="InterPro:IPR016177" /db_xref="UniProtKB/Swiss-Prot:Q15047" /translation="MSSLPGCLGLDAATAAVESEEIAELQQAVVEELGISMEELRQFI DEELEKMDCVQQRKKQLAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSK LGLQYRDSSSEDEASRPTEIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKS AQDVQKFMDAVNKKSSSQELHKGALSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTL IAIQTVGPGKKYKVKFDNKGKSLLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWL YAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCRDFIE EYITAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGS TRLEPMFSMKTSSASALEKKHGGQLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKPME LPQPAAPPAPPGPPTPPAPPLSPQAGDIESLESQLAQSRKQVAKKSTSFRPGSVGSGH SSPASPALSENVSSGKPGINQTYSSPGPSCSXXXXPPALPALPAFHGMLERAPAEPSY RAPMEKLFYLPHVCSYTCLSRVRPILSEQYRGKNPLLVPLLYDFRRMTARRRVNRKMG FHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYIL DITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDK SKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCNCDPNMCTNRL VQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYF ANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCK DEDFSTSSVWRSYATRRQTRGQKENGVSETASKDSRPPDLGPPHIPVPLAIPMGGCNP PSSEETPKNKVASWLSCNSVSEGGFADSDSHSSFKTSEGGEGRAAGGRGEAEKASTSG LGLKDEGDIKPAKKEDPDDRNKMSVVMESARNYGYNPSPMKTEGLRRPPSKTSMHQSR RLLASAQPHADDVLTLSSSTESEGDSGASRKPAAGQTAATAVDSDDIQTISSGSEGDD FEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYD GEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTE LTWDYNYEVGSVEGKELLCCCGAIECRGRLL" assembly_gap 18914553..18914563 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<18925283..>18928183) /locus_tag="PAL_GLEAN10017550" mRNA complement(join(<18925283..18925420,18925623..18925776, 18925889..18925995,18926176..18926304,18926491..18926583, 18926810..18926860,18926962..18927019,18927235..18927353, 18927524..18927641,18928011..>18928183)) /locus_tag="PAL_GLEAN10017550" /product="LAG1 longevity assurance like protein 2" CDS complement(join(18925283..18925420,18925623..18925776, 18925889..18925995,18926176..18926304,18926491..18926583, 18926810..18926860,18926962..18927019,18927235..18927353, 18927524..18927641,18928011..18928183)) /locus_tag="PAL_GLEAN10017550" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="LAG1 longevity assurance like protein 2" /protein_id="ELK06037.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR006634" /db_xref="InterPro:IPR009057" /db_xref="UniProtKB/Swiss-Prot:Q96G23" /translation="MLQTLYDYFWWERLWLPVNLTWADLEDRDGRVYAKASDLYITLP LALLFLIIRYFFELYVATPLAALLNVKEKTRLRAAPNPTLEHFYLTSGKHPKQAEVEL LSRQSGLSGRQVERWFRRRRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWF YDLRKVWEGYPIQSMIPSQYWYYMIELSFYWSLLFSIASDVKRKDFKEQIIHHVATII LISFSWFANYIRAGTLIMALHDSSDYLLESAKMFNYAGWKNTCNNIFIVFAVVFIITR LVILPFWILHCTVVYPLELYPAFFGYYFFNSMMGVLQALHIFWAYLILRMAHKFITGK VEDERSDREETESSEGEEPAAGGGAKSRPLANGHPILNNHHPKND" assembly_gap 18932490..18933341 /estimated_length=852 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18939856..>18946989 /locus_tag="PAL_GLEAN10017551" mRNA join(<18939856..18939930,18940096..18940192, 18940744..18940838,18941058..18941171,18941376..18941466, 18942469..18942548,18942741..18942800,18943287..18943371, 18943513..18943608,18943692..18943750,18946572..18946694, 18946927..>18946989) /locus_tag="PAL_GLEAN10017551" /product="Annexin A9" CDS join(18939856..18939930,18940096..18940192, 18940744..18940838,18941058..18941171,18941376..18941466, 18942469..18942548,18942741..18942800,18943287..18943371, 18943513..18943608,18943692..18943750,18946572..18946694, 18946927..18946989) /locus_tag="PAL_GLEAN10017551" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_function: GO:0005544 - calcium-dependent phospholipid binding [Evidence IEA]" /codon_start=1 /product="Annexin A9" /protein_id="ELK06038.1" /db_xref="InterPro:IPR001464" /db_xref="InterPro:IPR009116" /db_xref="InterPro:IPR018502" /db_xref="UniProtKB/Swiss-Prot:Q3ZC08" /translation="MSVTSRKARPSLTQEILSYLGLANKTAAWGTLGTLRTFLSFSVD KDVQRLLRAIAGQGVDRHAIVDVLTNRSKEQRQVISRAFQERTQQDLLTSLQAALSGN LERIVVALLRPAAHFDAQELRTALKDSGPANEVIVEILATRAPPQLQECLAVYKHDFQ VEAEEDIKSATSGTLQDLFLALAKGDRESCSEVIDYHLAEQDVQALKQADQPGSEETW VLILTQRNPEHLIRVFDQYQRRTGHAPERTVRDRFHGDAQIALLSLASVIRNTPLYFA NKLHEALQETEPDNQALMRILISRSETDLLSIRAEYKKKFGKSLYSSLQDAVKGDCRL ALLALCRAEDL" gene complement(<18948336..>18952870) /locus_tag="PAL_GLEAN10017552" mRNA complement(join(<18948336..18948476,18948657..18948809, 18949133..18949324,18950122..18950264,18950593..18950695, 18951029..18951187,18951597..18951661,18952080..18952137, 18952376..>18952870)) /locus_tag="PAL_GLEAN10017552" /product="Protein FAM63A" CDS complement(join(18948336..18948476,18948657..18948809, 18949133..18949324,18950122..18950264,18950593..18950695, 18951029..18951187,18951597..18951661,18952080..18952137, 18952376..18952870)) /locus_tag="PAL_GLEAN10017552" /codon_start=1 /product="Protein FAM63A" /protein_id="ELK06039.1" /db_xref="InterPro:IPR007518" /db_xref="UniProtKB/Swiss-Prot:Q8N5J2" /translation="MEHHQPECPPSGETRTAEAVSPENHEVVSEPDEHDQDRDAGDAD GAAGDANGAAGDADGAAGDANGADQVSLPANGAAGDADGAAGDADVAAGDADVVAGEQ EPVHQVLLPAQGQDELESLRGGGARSFLTHLLEHPAFLLKPVNQNFPDYSPYFFNLNK WYKIFVKLPPQKEVITSDELMAHLGDCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKL ATGLDVNVRFTGVSDFEYTPECSVFDLLGVPLYHGWLVDPQSPEAVSAVGKLSYNQLV EKIITCKHSSDTSLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHF STMTKHKGHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSEFHLSHSLGKGPGAEG GSDSPEKQRQVDQDYLIALFLQQQQRPQGTSGXXXXXXXXXXXXXXYQQQQGVQPVPA RAPSPQNLCPCAHPRQTGDQLLNPVQGRGATSGRPAGERRQRPKQESDCVLL" assembly_gap 18948713..18948752 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <18957374..>18971030 /locus_tag="PAL_GLEAN10017553" mRNA join(<18957374..18957412,18962915..18963007, 18963538..18963740,18965121..18965305,18965998..18966156, 18967012..18967106,18968705..18968863,18970602..>18971030) /locus_tag="PAL_GLEAN10017553" /product="Protein prune like protein" CDS join(18957374..18957412,18962915..18963007, 18963538..18963740,18965121..18965305,18965998..18966156, 18967012..18967106,18968705..18968863,18970602..18971030) /locus_tag="PAL_GLEAN10017553" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0016462 - pyrophosphatase activity [Evidence IEA]; GO_function: GO:0016787 - hydrolase activity [Evidence IEA]; GO_function: GO:0030145 - manganese ion binding [Evidence IEA]" /codon_start=1 /product="Protein prune like protein" /protein_id="ELK06040.1" /db_xref="InterPro:IPR001667" /db_xref="InterPro:IPR004097" /db_xref="UniProtKB/Swiss-Prot:Q86TP1" /translation="MEDYLQGCRAALQESRPLHVVLGNEACDLDSMVSALTLAFYLAK TTEAEEVFVPVLNIKRSELPLRGDSVFFLQKIHIPESLLIFRDEIDLHALHQAGQLTL ILVDHHALPRSDAALEEAVAEVIDHRPIEQKCCPPCHVSVELVGSCATLVTERILQGA PEILDRQTAALLHGTIILDCVNMDLKIGRATLKDKNCVEKLEALFPDLPERSDIFDSL QKAKFDVSGLTTEQMLRKDQKTISRQGIKMVISAIYMDLEAFLQRSGLIADLRAFCQA HSCDVLVAMTIFFNTHNEPVRHLAIFCPHAALRMTICGVLERSSSPSLNLTPAPSIHP NLQAYLQGNTQIFRKKLLPLLQEALSAYSDSKATPSGQHETAGVSGEQVDKELDGAGA LLFPRLSQDEEEPSLPPTPMNSLVDECPLDQGLPKLSAEAIFEKCSQISLSQSTTSSV SKK" gene <18973075..>18979842 /locus_tag="PAL_GLEAN10017555" mRNA join(<18973075..18973118,18974237..18974301, 18974523..18974747,18977401..18977583,18977767..18977869, 18978045..18978176,18978961..18979047,18979232..18979330, 18979806..>18979842) /locus_tag="PAL_GLEAN10017555" /product="Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein" CDS join(18973075..18973118,18974237..18974301, 18974523..18974747,18977401..18977583,18977767..18977869, 18978045..18978176,18978961..18979047,18979232..18979330, 18979806..18979842) /locus_tag="PAL_GLEAN10017555" /codon_start=1 /product="Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein" /protein_id="ELK06041.1" /db_xref="InterPro:IPR001251" /db_xref="InterPro:IPR022181" /db_xref="UniProtKB/Swiss-Prot:Q7Z465" /translation="MGSLPEAGEKPLGLGLLPEEADASEGPGGPKRDAQAGTPSTLAL CGQRPMRKRLSAPGLLLNLTKEPGDDGASPTHSVPSSPGGSSDLEVDELETPSDSEQL DSGHEFDWEDELPQAEGLRPSEAAEGLGQGCVWDVAGEDGHRWRVFRTGQREQRVDMT AIEPYKKALSHGGYHGDGLNAVIVFASCYLPRSSIPNYTYVMEHLFRYMVGTLELLVA ENYLLVHLSGGTSRAQVPTLGWMRQCYRTLDRRLRKNLRALVVVHATWYVKAFLALLR PFISSKFTRKIRFLNSLAELAQLISLDQVHIPEAVRQLDQDLRGSGGI" gene complement(<18985261..>19035310) /locus_tag="PAL_GLEAN10017556" mRNA complement(join(<18985261..18985711,19029610..19029756, 19030021..19030194,19030433..19030585,19030867..19030998, 19031324..19031541,19031858..19031946,19032131..19032250, 19032417..19032507,19032732..19032833,19033175..19033231, 19033368..19033431,19033714..19033828, 19035196..>19035310)) /locus_tag="PAL_GLEAN10017556" /product="Semaphorin-6C" CDS complement(join(18985261..18985711,19029610..19029756, 19030021..19030194,19030433..19030585,19030867..19030998, 19031324..19031541,19031858..19031946,19032131..19032250, 19032417..19032507,19032732..19032833,19033175..19033231, 19033368..19033431,19033714..19033828,19035196..19035310)) /locus_tag="PAL_GLEAN10017556" /codon_start=1 /product="Semaphorin-6C" /protein_id="ELK06042.1" /db_xref="InterPro:IPR001627" /db_xref="UniProtKB/Swiss-Prot:Q9H3T2" /translation="MPRAPRFMPWLLLLLLSLPHTQAAFPQDPLPLLTSDLQGTSPLS WFRGLEDDAVVAELGLDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTW RSQDVENCAVRGKLTDECYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGISSLQQEGE ELSGQARCPFDTAQSNVAVFAEGSLYSATAADFQASDAVVYRSLGSQPPLRSAKYDSK WLREPHFIHAFEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHW TSFLKLRLNCSVPGDSAFYFDVLQALTGPVDLFGRSALFGVFTTQTNSIPGSAVCAFY LDDIERGFEGKFKEQRSLDGPWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVL TFIKAHPLLDPAVPPATRQPLLTLTSRALLTQVAVDGAAGPYGNTTVLFLGSNDGTVL KVLPPGGQPGGREPILLEEIDAYSPSRCSGKRAAHTARRVIGLELDTEGHRLFVAFSG CIIYLPLSRCARHGACRRRGAGADAFQGKPGQAVEQFSGLVAPPGRVSHLRNPANTSS PRLGTLILCRDGKRKEEFEWENQGWRVQKGRERGVQTADRRREEPAVGIVCAGGCLPP KALVFFEANLPFLKNQVLLSETSTRSSPEEMLPHQIPPRTSALGPRFALSA" assembly_gap 18991058..18991348 /estimated_length=291 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19022480..19022530 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19027226..19027851 /estimated_length=626 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19039216..19039344 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19048307..>19048861 /locus_tag="PAL_GLEAN10017559" mRNA <19048307..>19048861 /locus_tag="PAL_GLEAN10017559" /product="Tumor necrosis factor, alpha-induced protein 8-like protein 2" CDS 19048307..19048861 /locus_tag="PAL_GLEAN10017559" /codon_start=1 /product="Tumor necrosis factor, alpha-induced protein 8-like protein 2" /protein_id="ELK06043.1" /db_xref="InterPro:IPR008477" /db_xref="UniProtKB/Swiss-Prot:B2KI57" /translation="MESFSSKSLALQAEKKLLSKMAGRSVAHLFIDETSSEVLDELYR VSKEYTHSRPQAQRVIKDLIKVAVKVAVLHRSGCFSPGELALAARFRQKLHQGAKTAL SFGEVAFTFEAAVLTDLLTECRDMLLELVAHHLTPKSHNRIRHVFDHFSDQGLLTALY GPDFTQHLGKICDGLRKLLDEGKL" gene complement(<19050390..>19055494) /locus_tag="PAL_GLEAN10017560" mRNA complement(join(<19050390..19050528,19050935..19051299, 19055315..>19055494)) /locus_tag="PAL_GLEAN10017560" /product="LysM and putative peptidoglycan-binding domain-containing protein 1" CDS complement(join(19050390..19050528,19050935..19051299, 19055315..19055494)) /locus_tag="PAL_GLEAN10017560" /note="GO_process: GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]" /codon_start=1 /product="LysM and putative peptidoglycan-binding domain-containing protein 1" /protein_id="ELK06044.1" /db_xref="InterPro:IPR002482" /db_xref="InterPro:IPR018392" /db_xref="UniProtKB/Swiss-Prot:A0JNI1" /translation="MASPSRQAPLGGSGLLQGSRARSYGSLVQSACSPVRERRLEHPL APGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPILTEPRDLFNGLDSEEE KDGEEEGQPRKDKAGPLSAERKKQETGAGRANGQAPPTPGQEPPTPIQDLSASDFLKK LDSQISLSKKAAAQKLNKGESGAPGEDSGLRLSPPRMQQRAVLGPVPLTRTSRTRTLR DQEDEIFKL" gene <19056378..>19058969 /locus_tag="PAL_GLEAN10017561" mRNA join(<19056378..19056428,19056695..19056765, 19057013..19057101,19057211..19057308,19057421..19057509, 19058526..19058720,19058870..>19058969) /locus_tag="PAL_GLEAN10017561" /product="Sodium channel modifier 1" CDS join(19056378..19056428,19056695..19056765, 19057013..19057101,19057211..19057308,19057421..19057509, 19058526..19058720,19058870..19058969) /locus_tag="PAL_GLEAN10017561" /codon_start=1 /product="Sodium channel modifier 1" /protein_id="ELK06045.1" /db_xref="UniProtKB/Swiss-Prot:Q9BWG6" /translation="MSFKREGDDWSQLNVLKKRRVGDLLASYIPEDEALMLRDGRFAC AICPHRPVLDTLAMLTAHRAGKKHLSSLQLFYGKKQPGKGTEQNPRQQSELERKETKA EAPLLTQTRLITQNALHRAPHYNSCCRRKYRPEAPRPPASRSPLPPPEVELHSRKISR DPEPGAGPQAEESAPASSAAPVSPTRRRALDRYLTLRSSGWIPDGRGRWVKDENVEFD SDEEEPPDPPLD" gene complement(<19060019..>19062862) /locus_tag="PAL_GLEAN10017562" mRNA complement(join(<19060019..19060171,19060408..19060551, 19060925..19061032,19061119..19061249,19061386..19061475, 19061960..19062076,19062406..19062562, 19062740..>19062862)) /locus_tag="PAL_GLEAN10017562" /product="Tropomodulin-4" CDS complement(join(19060019..19060171,19060408..19060551, 19060925..19061032,19061119..19061249,19061386..19061475, 19061960..19062076,19062406..19062562,19062740..19062862)) /locus_tag="PAL_GLEAN10017562" /note="GO_component: GO:0005856 - cytoskeleton [Evidence IEA]; GO_function: GO:0005523 - tropomyosin binding [Evidence IEA]" /codon_start=1 /product="Tropomodulin-4" /protein_id="ELK06046.1" /db_xref="InterPro:IPR004934" /db_xref="UniProtKB/Swiss-Prot:Q0VC48" /translation="MSSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENML LPAGLRQRDQTKKSPTGPLDRDALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKR EIPAEEQITLEPELEEALAHATDAEMCDIAAILGMYTLMSNKQYYDAICSGEICNTEG ISSVVQPDKYKPVPDEPPNPTKIEEILKSVRSNDKNLEEVNLNNIQDIPIAMLTELCA AMKTNTHVRSFSLVATKSGDPIANAVADMLRENRSVQSLNIESNFISSTGLMAVLKAV RENATLTELRVDNQRQWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTR NNELRE" assembly_gap 19061478..19061511 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19064773..>19074214) /locus_tag="PAL_GLEAN10017563" mRNA complement(join(<19064773..19065160,19065487..19065631, 19069806..19069982,19070384..19070498,19070672..19070817, 19074091..>19074214)) /locus_tag="PAL_GLEAN10017563" /product="Vacuolar protein sorting-associated protein 72 like protein" CDS complement(join(19064773..19065160,19065487..19065631, 19069806..19069982,19070384..19070498,19070672..19070817, 19074091..19074214)) /locus_tag="PAL_GLEAN10017563" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Vacuolar protein sorting-associated protein 72 like protein" /protein_id="ELK06047.1" /db_xref="InterPro:IPR008895" /db_xref="InterPro:IPR013272" /db_xref="UniProtKB/Swiss-Prot:Q5R5V9" /translation="MSLAGGRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEARGDD EYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEEPRRKRRVVTTAYKEPLKSLRPRKVS TPAGGSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKG PHCERPLTQEELLREAKITEELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVT VPLVGEPGPREETVDVEGLEPAPTASALTASTGPGPAVPPARCSRTFITFSDDATFEA WFPQGRAPKVPVREVCPVTHRPALYRDPVTDIPYATARAFKIIREAYKKYITAHGLPP AASALGPGPPPPEPLPGSGPRALRQKIVIK" assembly_gap 19077641..19077653 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19079670..>19109290 /locus_tag="PAL_GLEAN10017564" mRNA join(<19079670..19079694,19094146..19094177, 19095702..19095782,19097552..19097682,19098111..19098228, 19098402..19098554,19099231..19099530,19102007..19102212, 19102958..19103041,19103842..19103890,19104088..19104172, 19105192..19105338,19105528..19105657,19108875..19108997, 19109206..>19109290) /locus_tag="PAL_GLEAN10017564" /product="Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha" CDS join(19079670..19079694,19094146..19094177, 19095702..19095782,19097552..19097682,19098111..19098228, 19098402..19098554,19099231..19099530,19102007..19102212, 19102958..19103041,19103842..19103890,19104088..19104172, 19105192..19105338,19105528..19105657,19108875..19108997, 19109206..19109290) /locus_tag="PAL_GLEAN10017564" /note="GO_function: GO:0016307 - phosphatidylinositol phosphate kinase activity [Evidence IEA]; GO_process: GO:0046488 - phosphatidylinositol metabolic process [Evidence IEA]" /codon_start=1 /product="Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha" /protein_id="ELK06048.1" /db_xref="InterPro:IPR002498" /db_xref="InterPro:IPR016034" /db_xref="UniProtKB/Swiss-Prot:Q99755" /translation="MELGTMAQVSGVKRSMTSEAPCASGMPIKKIGHRGVDSTGETTY KKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYN DFRFKTYAPVAFRYFRELFGIRPDDYLYSLCNEPLIELFSSGASGSLFYVSSDDEFII KTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRS VKMHIKYDLKGSTYKRRASQKEREKPLPTLKDLDFLQDIPDGLFLDADMYNALCKTLQ RDCLVLQSFKIMDYSLLVSIHNIDHAQREPSSSETQCSTDTRRLAPQKALYSTAMESI QGEARRGGTIETHDHMGGIPARNSKGERLLLYIGIIDILQSYRFIKKLEHSWKALVHD GDTVSVHRPSFYAERFQRFMCSTVFKKIPLKPSPSKKFRSGSSFSRRGAPSSNSCVTY QSSVSGELKAQVTTKAEVEPGVHLGRPDVLPQTPPLEKVSEVSPIPDSSSSPVVGETL QMLCTSSSLLEKLEIEESDSSHVSVWGVGEVNALKGIKRMHWWTGASEQKTSDDLEQD SAISVIPRCQLLPQQC" assembly_gap 19085467..19085537 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19116443..>19124481 /locus_tag="PAL_GLEAN10017565" mRNA join(<19116443..19116468,19120282..19120422, 19121621..19121735,19122094..19122180,19122428..19122496, 19122641..19122856,19123161..19123269,19123440..19123571, 19123655..19123722,19124311..>19124481) /locus_tag="PAL_GLEAN10017565" /product="26S proteasome non-ATPase regulatory subunit 4" CDS join(19116443..19116468,19120282..19120422, 19121621..19121735,19122094..19122180,19122428..19122496, 19122641..19122856,19123161..19123269,19123440..19123571, 19123655..19123722,19124311..19124481) /locus_tag="PAL_GLEAN10017565" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="26S proteasome non-ATPase regulatory subunit 4" /protein_id="ELK06049.1" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR003903" /db_xref="InterPro:IPR007198" /db_xref="UniProtKB/Swiss-Prot:P55036" /translation="MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSN PENNVGLITLANDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQG KNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTL NGKDGTGSHLVTVPPGPSLADALISSPILAGEGGAMLGLGASDFEFGVDPSADPELAL ALRVSMEEQRQRQEEEARRAAAASAAEAGIAASGTEDSDDALLKMTIGQQEFGRPGLP DLSSMTEEEQIAYAMQMSLQGAEFGQAEAADIDASSAMDTSEPAKEEDDYDVMQDPEF LQSVLENLPGVDPNNEAIRNAMGSLASQATKEGKKDKKEEDKK" gene complement(<19125023..>19128030) /locus_tag="PAL_GLEAN10017566" mRNA complement(join(<19125023..19125306,19127868..>19128030)) /locus_tag="PAL_GLEAN10017566" /product="hypothetical protein" CDS complement(join(19125023..19125306,19127868..19128030)) /locus_tag="PAL_GLEAN10017566" /codon_start=1 /product="hypothetical protein" /protein_id="ELK06050.1" /translation="MSTRLQNSSRGAGSASRTLHPRSLQRTRLLTAGAWLLKVFLFPL DPGPRRALSLHNKGLREFYILFHPLQKIVLASWCSGKCRVHRPHLAEVRPLGSLIFRC LLPALPSLSPPLTQPGSEPLCSPNAHGPHQHRPFPLTGTAQLFLVG" gene <19132197..>19137024 /locus_tag="PAL_GLEAN10017567" mRNA join(<19132197..19134311,19134460..19134638, 19135005..19135181,19135261..19135423,19135568..19136112, 19136265..19136406,19136539..>19137024) /locus_tag="PAL_GLEAN10017567" /product="Zinc finger protein 687" CDS join(19132197..19134311,19134460..19134638, 19135005..19135181,19135261..19135423,19135568..19136112, 19136265..19136406,19136539..19137024) /locus_tag="PAL_GLEAN10017567" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 687" /protein_id="ELK06051.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q8N1G0" /translation="MGDMKTPDFDDLLAAFDIPDIDANEAIHSGPEENEGPGGSVKPE PSVGGESGEAAAAAPGDGPGVPAQASDLGLPAADISAVSVIVKNTVCPEQSESLVGSS EGEEAGAGGVTKEGPVGPRLMQNGFGGPEPSLPGTPHPPAPPSVGSWKENSTEGKAPL DLFDHFGPESGEHPDPLPLSAPSPPREGAVTPPPFPSPFELARENGPALLPPGSPPLL GALKQGGCSPLHPPGPAQRASGLSPEAAGIPASASPPRVAGGPFFKQSPGHHSPLASP EVPSCQPLKEEEDEGPVDKSPTASPQSPSSGAEAADEDSNDSPASSSSSRPLKVRIKT IKTSCGSVTRTVTRVPSDPDPPAPLAEGTFLAEASLLKLSPVAPTPEAPKVVSVQLGD GTRLKGTVLPVATIQNASTAMLMAASVARKAVVLPGGTATSPKMMAKNVLGLVPQALP KAEGRAGLGTGGQKVNGASVVMVQPSKPATAPGAGGGTVISRTQSSLVEAFNKILNSK NLLPAYRPNLSPPAEAGLALPPSGYRCLECGDAFSLEKSLARHYDRRSMRIEVTCNHC ARRLVFFNKCSLLLHAREHKEKGLVMQCSHLVMRPVALDQMVGQPDVTPLLAVPPALG PPALAVLPALGKGDGAIASAIAAVAAEAPVLPLSAEPPAAPATSASTCFRCLECREQC RDRAGMAAHFQQLGPPAPGATSNVCPTCPMMLSNRCSFSAHQRMHKNRAPHVCPECGD SFLQASFQAHLREACLHFSRRVGYRCPSCAVVFGGVNSIKSHIQTSHCEVFHKCPICP MAFKSAPSAHAHLYTQHPSFHAQQAKMIYKCAMCDTVFTHKPLLSSHFDQHLLPQRVS VFKCPSCPLLFAQKRTMLEHLKNTHQSGRSGEETAGKGAEGALLTPKAEPEERAVSRG GAAPPVEVSSSSSEEEEVPSSPEPPRPTRRPRRDLGTKGAKAGGGGPGGWTCGLCHSW FPERDEYVAHMKKEHGKVSEVGCRGGLGLSPRGSGAVSELALSIPTLLSQSVKKFPCR LCERSFCSAPSLRRHVRVNHEGIKRVYPCRYCTEGKRTFSSRLILEKHVQVRHGLPLG AQSPGRGSIVVRGPGARAQGPGLKRRQSSDSCSEEPDSTTPPAKAPRGGPGPGGPLRY RSAGPLEQSLMVGLRVEGGTQQCLDCGLCFASPGSLSRHRFISHKKKRGGGAAALGLG AGDEEAPTPRSDPDGGEPPSPASGGPLTCKVCGKSCDSPLNLKTHFRTHGMAFIRARQ GGSGDN" assembly_gap 19137636..19137750 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19138513..>19169495) /locus_tag="PAL_GLEAN10017568" mRNA complement(join(<19138513..19138694,19139778..19139898, 19140143..19140275,19142660..19142925,19143663..19143786, 19143911..19144015,19144382..19144491,19145954..19146181, 19147291..19147518,19154046..19154979, 19169377..>19169495)) /locus_tag="PAL_GLEAN10017568" /product="Phosphatidylinositol 4-kinase beta" CDS complement(join(19138513..19138694,19139778..19139898, 19140143..19140275,19142660..19142925,19143663..19143786, 19143911..19144015,19144382..19144491,19145954..19146181, 19147291..19147518,19154046..19154979,19169377..19169495)) /locus_tag="PAL_GLEAN10017568" /note="GO_function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]" /codon_start=1 /product="Phosphatidylinositol 4-kinase beta" /protein_id="ELK06052.1" /db_xref="InterPro:IPR000403" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/Swiss-Prot:Q9UBF8" /translation="MVPASCLSPFQLNTLGFGVTHNSLVTLPRSPCYPVGRRVDLEAR SLAVAMGDTVVEPAPLEPTSEPTSGPPGNNGASLSVITEGVGELPVIDPEVAQKACQE VLEKVRLSHGCVTVCSKGTPLELVNGEGVDSEIRCLDDPPAQIREEEDEVGATVASGT AKGARRRRQNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRDE DVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSIDFSLQCALLLGAYSSDMHISTQ RHSRGTKLRKLILSDELKPAHRKRELPCSSPAPDTGLSPSKRTHQRSKSDATASISLS SNLKRTASNPKVENEDEPVRLAPEREFIKSLMAIGKRLATLPTKEQKTQRLISELSLL NHKLPARVWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECENFDTTSVPAR IPENRIRSTRSVENLPECGITHEQRAGSFSTVPNYDNDDEAWSVDDIGELQVELPEVH TNSCDNISQFSVDSITSQESKEPVFIAAGDIRRRLSEQLAHTPTAFRRDPEDPSAVAL KEPWQEKVRRIREGSPYGHLPNWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWDQERV PLWIKPYKILVISADSGMIEPVVNAVSIHQVKKQSQLSLLDYFLQEHGSYTTEAFLSA QRSFVQSCAGYCLVCYLLQVKDRHNGNILLDAEGHIIHIDFGFILSSSPRNLGFETSA FKLTTEFVDVMGGLDGDMFNYYKMLMLQGLIAARKHMDRVVQIVEIMQQGSQLPCFHG SSTIRNLKERFHMSMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM" assembly_gap 19139631..19139744 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19161845..19161957 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19162281..19162292 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19169631..19169656 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19169676..>19173391) /locus_tag="PAL_GLEAN10017570" mRNA complement(join(<19169676..19170659,19170784..19170881, 19171133..19171334,19171643..19171724,19171869..19171988, 19172181..19172300,19172540..19172622,19173029..19173062, 19173276..>19173391)) /locus_tag="PAL_GLEAN10017570" /product="DNA-binding protein RFX5" CDS complement(join(19169676..19170659,19170784..19170881, 19171133..19171334,19171643..19171724,19171869..19171988, 19172181..19172300,19172540..19172622,19173029..19173062, 19173276..19173391)) /locus_tag="PAL_GLEAN10017570" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="DNA-binding protein RFX5" /protein_id="ELK06053.1" /db_xref="InterPro:IPR003150" /db_xref="UniProtKB/Swiss-Prot:P48382" /translation="MAEDEPDAKSPKTGGRAPSGGAEAGEPTTLLQRLRGTISKAVQN KVEGILQDVQKFSDNDKLYLYLQLPSGPSTGDKSSEPSTLSNEEYMYAYRWIRNHLEE HTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYC YSGIRRKTLVSMPPLPGLDLKGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKR SFGSIVEVARFLLQQHLISARSAHAHVLKAVGLAEEEEHAPRERSSKPKNGVETPEGG AQKKERPAQPPQEPEARAGAGPPARGERRKSAAESPAAAPAANPQVNALVARLPPLLP RAPRALIAPIRVSPSILAPKPSGALKLAALPLPCRAGGPQAAVPIINMILPTVPALSG PGPGPGQAPLAGLQGPEGRELGVGGGPRPQDRGVKRTAEVPGSEANGQDPAAKAAKQE VEGTGSDAKRKRGRPRKKSGGSRESNSTPDKAAAAVDSAQASRFPRETWASEAGSAPA GGSQSSGPGGEAERGTALAQGQEDGAVSRGGRGPSSRYAKGGEDTTLLSPLKVSVIKG SRSHKEAALSVEGEVDSAAQGNKDSKGHVPQSSSSQERRDPRATPP" gene complement(<19180565..>19184921) /locus_tag="PAL_GLEAN10017571" mRNA complement(join(<19180565..19180727,19180939..19181057, 19181188..19181280,19181491..19181612,19181704..19181782, 19182241..19182419,19182685..19182867,19183416..19183536, 19184046..19184312,19184605..19184717, 19184915..>19184921)) /locus_tag="PAL_GLEAN10017571" /product="Selenium-binding protein 1" CDS complement(join(19180565..19180727,19180939..19181057, 19181188..19181280,19181491..19181612,19181704..19181782, 19182241..19182419,19182685..19182867,19183416..19183536, 19184046..19184312,19184605..19184717,19184915..19184921)) /locus_tag="PAL_GLEAN10017571" /note="GO_function: GO:0008430 - selenium binding [Evidence IEA]" /codon_start=1 /product="Selenium-binding protein 1" /protein_id="ELK06054.1" /db_xref="InterPro:IPR008826" /db_xref="UniProtKB/Swiss-Prot:Q13228" /translation="MKGPREEIIYLPCVYRNTDIEAPDYLATVDVDPKSPQYCQVIHR LPMPNLKDELHHSGWNTCSSCYGDSSKSRTKLVLPCLISSRVYVVDVGAEPRAPKLHK ARSLPLPLRDPVGRRPAQLSCLQFSGRVIEPKDIHAKCGLAYLHTSHCLPSGEVMISS LGDLEGNGKGGFVLLDGETLEVKGTWERPGGAAPLGYDFWYQPRHNVMISTEWAAPNV FRDGFNLADVEAGRYGSLLTVWDWQRHEIVETLPLQDGLSPLEIRFLHDPAAAQGFVG CALSSTIQRFFKNKGGTWSVEKVIQVPPKKVKGWMLPEMPGLITDILLSLDDRFLYFS NWLHGDLRQYDISDPQKPRLTGQLFLGGSIVKGGPVQVLEDKELTAQPEPLVVKGKRV VGGPQMIQLSLDGKRLYVTTSLYSAWDKQFYPELIREGSVMLQVDVNTVNGGLKLNPN FLVDFGKEPLGPVLAHEPRYPGGDCSSDIWL" assembly_gap 19190389..19190403 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19196605..19196631 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19203767..>19229406) /locus_tag="PAL_GLEAN10017573" mRNA complement(join(<19203767..19205438,19205568..19205592, 19205852..19205964,19206136..19206192,19206607..19206747, 19206893..19207062,19207164..19207298,19209554..19209700, 19210108..19210170,19212608..19212723,19213723..19213877, 19214242..19214579,19215208..19215314,19217397..19217588, 19217696..19217980,19219224..19219332,19220144..19220319, 19228206..19228364,19229283..>19229406)) /locus_tag="PAL_GLEAN10017573" /product="hypothetical protein" CDS complement(join(19203767..19205438,19205568..19205592, 19205852..19205964,19206136..19206192,19206607..19206747, 19206893..19207062,19207164..19207298,19209554..19209700, 19210108..19210170,19212608..19212723,19213723..19213877, 19214242..19214579,19215208..19215314,19217397..19217588, 19217696..19217980,19219224..19219332,19220144..19220319, 19228206..19228364,19229283..19229406)) /locus_tag="PAL_GLEAN10017573" /codon_start=1 /product="hypothetical protein" /protein_id="ELK06055.1" /translation="MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTTVSV SQQPAAAPVPIAAHASVAGHLSTSTTVSSSGAQNSDSTKKTLVTLIANNNAGNSLVQQ GGQPLILTQNPAPGLGTMVSQPVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNV RPVQNAMNQVGIVLNVQQGQTVRPITLVPGTQFVKPTVGVPQVFSQMAPVRPGSTMPV RPTTNTFTTVIPATLTIRSTVPQSQAQQTKSTPSTSTTPTATPPTSLGQLAVQPPGQS NQTPNPKLVSITSFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPMVVSNNSSA HGSQRTSGPESSMKVTSSVPVFDLQDGGRKICPRCSAQFRVTEALRGHMCYCCPEMVE YQKKGKSLDSEPSVPSAAKPPSPEKTTPVASTPSSTPIPALSPPAKAPEPNEAVGDAA QTKLIMLVDDFYYGRDGGKVAQLTNFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVEL DQQNGEVDGHTICQHCYRQFSTPFQLQCHLENVHSPYESTIAAVRVEQRPHPPASFPS LSYNTDLRSLCPSLAWVMLAGPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHF RMIHEDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCNKCRLQFLFAKDKIEHKL QHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTAPVSSGDAPPSSLQEAGPLASTDPLP VFLYPPVQRNVQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSR AYANHMINNHVPRKSPKYLALFKNSVSGIRLACSSCTFVTSVGDAMAKHLVFNPSHGS SSVLPRGLTWISHSRHGQSRERVHDRSSKNLYPPPPFPSHKAATVKSAGATPAEPEEL LAPAAQALPSPASTATPPPTPTHPQPIALPPSAPEGAECLNVDDQEEGSPGLQEPEAA SGGGNSGGLGRKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQTSQGE HLEGKYLSLEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVR FMLRHHLTPHARRAVAHSLPKGVAENAGLFIEFVQRQIHKQDLPLSMIVAVDEISLFL DAEVLSSDDRKENALQTVGTGEPWCDVVLAILADGTVLPTLVFCRGQVDQPADVPDSI LLEAKETGYSDDEIMELWSTRVWQKHTACQRGKGMLVMDCHRTHLSEEVLAMLSASST LPAVVPAGCSSKIQPLDVCIKRTVKNFLHKKWKERAREMADTAWDSAFLLQLVLAWLA EVLAVIGDCPELVQRSFFVASVLPGPDGNMNSPTRNADMQEELIASLEEQLKLSGEQS EEPSASTPRPRSSPEETVEPESLHQLFEGESETESFYGFEEADLDLMEI" assembly_gap 19208238..19208297 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19227340..19227385 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19242850..19243775 /estimated_length=926 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19254305..19255277 /estimated_length=973 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19273667..19273738 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19279610..19280116 /estimated_length=507 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19284957..>19287742 /locus_tag="PAL_GLEAN10017574" mRNA join(<19284957..19285073,19287485..>19287742) /locus_tag="PAL_GLEAN10017574" /product="Cingulin" CDS join(19284957..19285073,19287485..19287742) /locus_tag="PAL_GLEAN10017574" /codon_start=1 /product="Cingulin" /protein_id="ELK06056.1" /db_xref="UniProtKB/Swiss-Prot:B0KWC9" /translation="MEKEEMEEELTEKIEALQRELGQARAGAGDSRQVEELKKDLCRA QEELKDLRAERQSQEVAGRLRERELEKQLRAETDRGRGLEQQNVQLQKTLQQLRQDCE DASKARGVGTGLRRWRLRGLEG" gene <19288030..>19293507 /locus_tag="PAL_GLEAN10017575" mRNA join(<19288030..19288230,19288564..19288821, 19289712..19289882,19290421..19290582,19291430..19291519, 19291798..19291881,19291994..19292112,19292429..19292537, 19292883..19293046,19293366..>19293507) /locus_tag="PAL_GLEAN10017575" /product="Cingulin" CDS join(19288030..19288230,19288564..19288821, 19289712..19289882,19290421..19290582,19291430..19291519, 19291798..19291881,19291994..19292112,19292429..19292537, 19292883..19293046,19293366..19293507) /locus_tag="PAL_GLEAN10017575" /note="GO_component: GO:0016459 - myosin complex [Evidence IEA]; GO_function: GO:0003774 - motor activity [Evidence IEA]" /codon_start=1 /product="Cingulin" /protein_id="ELK06057.1" /db_xref="InterPro:IPR002928" /db_xref="UniProtKB/Swiss-Prot:P59242" /translation="MAAEAEAAVLGQRRTAVETTLRETQEENDEFRRCILGLEQQLKE ARGLAEGGEVAEARLRDKVQRLEAEKQRLEGALDAAQEEEGSLAAAKRALEARLDEAQ RALARMAQEQQALSRALEEEGKQREALRQAKAELEEQKRLLDRTVARLNKELEQIGDD SRQALQQLQAQLEEYKEKARREVADAQRQAKEWASEAEKNSGGLSRLQDETQRLRQAL QASQADRDTAQLDKELLAQRLQGLEQEAENKKRSQDDRTRQLKGLEEKVSRLEAELDE ERSTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQNKDLKSRLASSE GFQKPSSSFSQLESQNRELQERLQAEEREKTVLQSTNRKLERRVKELSIQIDDERQHV NDQKDQLSLKVKALKRQVDEAEEEIERLDGLRKKAQRELEEQHEVNEQLQARIKAVEK DSWRKASRSAAESALQHEGLSSDEEFDRVYDPSSIASLLTESNLQTSSC" assembly_gap 19297848..19297879 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19300031..>19325862 /locus_tag="PAL_GLEAN10017577" mRNA join(<19300031..19300066,19309940..19310041, 19313037..19313123,19313684..19313773,19315429..19315494, 19317453..19317566,19320576..19320704,19321257..19321351, 19323156..19323261,19324216..19324299,19325104..19325204, 19325799..>19325862) /locus_tag="PAL_GLEAN10017577" /product="Tuftelin" CDS join(19300031..19300066,19309940..19310041, 19313037..19313123,19313684..19313773,19315429..19315494, 19317453..19317566,19320576..19320704,19321257..19321351, 19323156..19323261,19324216..19324299,19325104..19325204, 19325799..19325862) /locus_tag="PAL_GLEAN10017577" /codon_start=1 /product="Tuftelin" /protein_id="ELK06058.1" /db_xref="UniProtKB/Swiss-Prot:P27628" /translation="MEEESTNPGLGKAGRKTYAVVSGCSTSNALASELVESNDGHEEI IKVYLKGKSGDKMIHEKNINQLKSEVQYIQEARNCLQKLREDISSTLERDPAEPHRRQ EIQVVLEKPNGFSQSPRTLCSGPPEVDAYAEGDAESLRRTVRDLLAKLQEAERQHQSD RVAFEVTVSRYQREAEQSHVALQRAEDRAGQRETEVGELQRRLLGMQTEHQALLAKVR EGEMALEELRSQSADCRAEQEKAADLESEVARLREKIHHLDDMLKSQQRKVRQMIEQL QNSKAVIQSKDTTIQELKEKITYLEAENLEMHDRMEHLIEKQISHSNFSTQTWATTEN LGGVRIAKPPSPKPMPLIRVVET" assembly_gap 19309786..19309921 /estimated_length=136 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19312910..19312943 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19320276..19320306 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19323306..19323352 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19331238..19331281 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19346078..19346441 /estimated_length=364 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19362326..19362398 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19365844..>19403729 /locus_tag="PAL_GLEAN10017578" mRNA join(<19365844..19365971,19368327..19368558, 19380927..19381119,19382744..19382808,19384360..19384464, 19387353..19387431,19391962..19392125,19396491..19396580, 19401852..19402001,19402298..19402426,19402798..19402857, 19403682..>19403729) /locus_tag="PAL_GLEAN10017578" /product="Sorting nexin-27" CDS join(19365844..19365971,19368327..19368558, 19380927..19381119,19382744..19382808,19384360..19384464, 19387353..19387431,19391962..19392125,19396491..19396580, 19401852..19402001,19402298..19402426,19402798..19402857, 19403682..19403729) /locus_tag="PAL_GLEAN10017578" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0035091 - phosphoinositide binding [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]" /codon_start=1 /product="Sorting nexin-27" /protein_id="ELK06059.1" /db_xref="InterPro:IPR000159" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001683" /db_xref="UniProtKB/Swiss-Prot:A5PKA5" /translation="MVANLKLGLTEEEVRPQQAPLVPGDSWRTPRLGVCDGFQGSSLN GVNVEGATHKQVVDLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAV PISVPTYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPG KWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRV ALPDGTAVTVRVKKNSTTDQVYQAIAAKVGMDSMTVNYFALFEVINHSFVRKLAPNEF PHKLYVQNYTSAVPGTCLTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKA EEKSYQLQKLYEQRKMVMYLNMLRTCEGYNEIIFPHCACDSRRKGHVITAISITHFKL HACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMH ECFERVFCELKWRKENIFQTARSQQRDVAT" assembly_gap 19403934..19403974 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19409123..19409171 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19410915..19410965 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19414212..>19426022) /locus_tag="PAL_GLEAN10017579" mRNA complement(join(<19414212..19414339,19414939..19415082, 19415691..19415756,19416084..19416233,19416462..19416603, 19416747..19416890,19417854..19417933,19418024..19418152, 19418552..19418600,19424592..19424674, 19425878..>19426022)) /locus_tag="PAL_GLEAN10017579" /product="CUG-BP- and ETR-3-like factor 3" CDS complement(join(19414212..19414339,19414939..19415082, 19415691..19415756,19416084..19416233,19416462..19416603, 19416747..19416890,19417854..19417933,19418024..19418152, 19418552..19418600,19424592..19424674,19425878..19426022)) /locus_tag="PAL_GLEAN10017579" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="CUG-BP- and ETR-3-like factor 3" /protein_id="ELK06060.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q08E07" /translation="MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYT GLHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGML GKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRT LPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAAL VAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAA LGVNGYSPVPTQPAGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTGPDGC NIFIYHLPQEFTDSEVLQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI QAMNGFQIGMKRLKVQLKRPKDANRPY" assembly_gap 19415375..19415670 /estimated_length=296 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19419289..19419552 /estimated_length=264 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19426722..19426735 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19430887..19431109 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19431127..>19437987 /locus_tag="PAL_GLEAN10017580" mRNA join(<19431127..19431210,19431692..19431768, 19435314..19435360,19437836..>19437987) /locus_tag="PAL_GLEAN10017580" /product="hypothetical protein" CDS join(19431127..19431210,19431692..19431768, 19435314..19435360,19437836..19437987) /locus_tag="PAL_GLEAN10017580" /codon_start=1 /product="hypothetical protein" /protein_id="ELK06061.1" /db_xref="UniProtKB/Swiss-Prot:A6NNX1" /translation="MATLQGGLLESDPGALSPAQLEQLRDLKIQTRIANEKYLRTHKE VEFLISGFFREMFLQRPDNVREFASENPNEAFSKKHTRRGPLLRSVISDSLGTVPGRS SLQHSRLSVFEKLARAL" gene complement(<19445322..>19451870) /locus_tag="PAL_GLEAN10017581" mRNA complement(join(<19445322..19445456,19445581..19445664, 19446145..19446246,19447276..19447326,19447533..19447657, 19448071..19448209,19451832..>19451870)) /locus_tag="PAL_GLEAN10017581" /product="39S ribosomal protein L9, mitochondrial" CDS complement(join(19445322..19445456,19445581..19445664, 19446145..19446246,19447276..19447326,19447533..19447657, 19448071..19448209,19451832..19451870)) /locus_tag="PAL_GLEAN10017581" /codon_start=1 /product="39S ribosomal protein L9, mitochondrial" /protein_id="ELK06062.1" /db_xref="InterPro:IPR009027" /db_xref="InterPro:IPR020070" /db_xref="UniProtKB/Swiss-Prot:Q2TBK2" /translation="MRGQVQEFRVRVPRWWKVPLAGEGRKPRLHRRHRVYRLVEDTKH RPKENLELILTQSVDELGVRGDLVSVKKSVGRNRLLPQGLAVYPSPENKKLFEEEKLL RQEGKLEKIQTRAGEATVKFLRSCHLEVGMRNNIKWELNPEIVARHFLKNLGVVVAPH ALKLPEEAITRWGEYWCEVTVNGLDTVRVPMSVVNFERPKTKRYKYWLAQQAARGMAP TSPQTL" assembly_gap 19448215..19448635 /estimated_length=421 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19450262..19450338 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <19452241..>19453870 /locus_tag="PAL_GLEAN10017582" mRNA join(<19452241..19452464,19452943..19453028, 19453728..>19453870) /locus_tag="PAL_GLEAN10017582" /product="Ornithine decarboxylase antizyme 3" CDS join(19452241..19452464,19452943..19453028, 19453728..19453870) /locus_tag="PAL_GLEAN10017582" /note="GO_function: GO:0004857 - enzyme inhibitor activity [Evidence IEA]; GO_function: GO:0008073 - ornithine decarboxylase inhibitor activity [Evidence IEA]" /codon_start=1 /product="Ornithine decarboxylase antizyme 3" /protein_id="ELK06063.1" /db_xref="InterPro:IPR002993" /db_xref="InterPro:IPR016181" /db_xref="UniProtKB/Swiss-Prot:Q9UMX2" /translation="MSTRADHHHSLSLPFQAGNLTVLATDPRLHQAPVQLDFHFRLTP KTSAHWHGLLCDHRLFLDIPYRALDRGNRESLTATLEYVEEKTDVDSVFVNFQNSRND RGALLRAFSYMGFELVRPDHPALPPWDNAIFMVYPLERDLGHLHSEPP" gene complement(<19456268..>19462246) /locus_tag="PAL_GLEAN10017583" mRNA complement(join(<19456268..19456320,19456498..19456594, 19456854..19456955,19457179..19457330,19457620..19457684, 19457927..19458099,19458288..19458448,19459317..19459676, 19459745..19459888,19460523..19460712,19461318..19461424, 19462123..>19462246)) /locus_tag="PAL_GLEAN10017583" /product="Tudor and KH domain-containing protein" CDS complement(join(19456268..19456320,19456498..19456594, 19456854..19456955,19457179..19457330,19457620..19457684, 19457927..19458099,19458288..19458448,19459317..19459676, 19459745..19459888,19460523..19460712,19461318..19461424, 19462123..19462246)) /locus_tag="PAL_GLEAN10017583" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]" /codon_start=1 /product="Tudor and KH domain-containing protein" /protein_id="ELK06064.1" /db_xref="InterPro:IPR002999" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR008191" /db_xref="InterPro:IPR018111" /db_xref="InterPro:IPR018351" /db_xref="UniProtKB/Swiss-Prot:Q9Y2W6" /translation="MSTERTSWTTLSTVQKIALGLGIPASAAVAYILYRRYRESREER LTFVGEDDVEMEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLIS GFPVQVCKAKAAIHQILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITC DKESEGTLLLSRLIKISGTQKEVAAAKATGHSSRPSPCSPQHLILEKVSEDEELRKRI AHSAETRVPRKQPISVRREAMAEPGAAGEPALWHSAGARTQQASPPGAPPHRGGGDVA IVGPEEGSWETPNSDSVQKSGAQTSPETSMFEIPSPDFSFHADEFLEVYVSASEHPNH FWIQIIGSRSLQLDKLVSEMTQHYENSLPEDLTVHVGDIVAAPLPTNGSWYRARVLGT LENGNLDLYFVDFGDNGDCPLRDLRALRSDFLSLPFQAVECSLARIGPAGEQWEEEAL DEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSSGKKLDIGLELVRKGYAVE LPEDMEENRAVSDTLHDAATETDISASSVLTETRKSPEERANTLSCLSLSEAASMSGD DNLEDDFLI" assembly_gap 19467155..19467326 /estimated_length=172 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<19473809..>19475590) /locus_tag="PAL_GLEAN10017584" mRNA complement(<19473809..>19475590) /locus_tag="PAL_GLEAN10017584" /product="Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4" CDS complement(19473809..19475590) /locus_tag="PAL_GLEAN10017584" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4" /protein_id="ELK06065.1" /db_xref="InterPro:IPR000372" /db_xref="InterPro:IPR000483" /db_xref="InterPro:IPR001611" /db_xref="InterPro:IPR003591" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:Q6UY18" /translation="MATATTPKQAWHPWRPLLILLLLLGGSGGSCPPACDCTSQPRAV LCAHRRLEAVPGGLPPDTELLDLSGNRLWGLQRGMLSRLGLLQELDLSDNQLSALEPG AFLGLQSLLTLRLQGNRLRILGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQQ LEVGDNHLVFVAPGAFAGLAKLRSLTLERCNLSTVPGRALARLPELGALRLRDLDIGR LPAGALRGLGQLQELEIHRWPALEALEPGSLAGLNLSSLAITCCNLSAVPFQALHHLS FLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADN ALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLWLLRLRGRLDFGSSAPACAGPQHVQ GKSLRDFSDILPPGHFTCQPALIRKSGPRWVIAEEGGRAIFSCSGDGDPAPTVSWMRP QGARLGRAGRVRVLEDGTLEIRSVQLRDRGPYVCVVSNVAGNDSLRTWLEVIRVEPPN GTLSDPNITTPGGPGPFFLDSRGVAMVLAVGFLPFLTSVTLCFGLIALWSKSKGRVKH HMTFDFVAPRPSGDKKSGGNRVTAKLF" gene complement(<19480035..>19516410) /locus_tag="PAL_GLEAN10017585" mRNA complement(join(<19480035..19480196,19483026..19483135, 19484295..19484405,19484588..19484695,19484850..19484982, 19485880..19486127,19486228..19486743,19488150..19488291, 19488583..19488668,19511732..19511856,19512131..19512241, 19514152..19514290,19515274..19515475, 19516288..>19516410)) /locus_tag="PAL_GLEAN10017585" /product="Nuclear receptor ROR-gamma" CDS complement(join(19480035..19480196,19483026..19483135, 19484295..19484405,19484588..19484695,19484850..19484982, 19485880..19486127,19486228..19486743,19488150..19488291, 19488583..19488668,19511732..19511856,19512131..19512241, 19514152..19514290,19515274..19515475,19516288..19516410)) /locus_tag="PAL_GLEAN10017585" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO_function: GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Nuclear receptor ROR-gamma" /protein_id="ELK06066.1" /db_xref="InterPro:IPR000536" /db_xref="InterPro:IPR001628" /db_xref="InterPro:IPR001723" /db_xref="InterPro:IPR003079" /db_xref="InterPro:IPR006683" /db_xref="InterPro:IPR008946" /db_xref="UniProtKB/Swiss-Prot:P51449" /translation="MIRTGFQVAARLGHRRALPGGPRVLPGLSPTSAFGSSVDSLVSI FCLKKTDFKDYALPNPSWCPDMLSLYQEFLEKTKTNEWVKIPSFKSNKDHIQGFKLPS ELAVTSDKDDRRLFTRCIQVEGQGYEYVIFFQPSQKKSVCLFQPGPYLEGIPGFAHGG SLTALVDEAFSKTAYLAGEGLLTISLNIRFQNLIPLGSLAVMNIDVEKIEDQKLYMRC IIQSRDQQTVYAKSSAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQHCNVAYS CTRQRNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQR QQQQREQAARTSPSGEQGADPLSRTLGLPDGQLPLGASPDLPEASACPPGLLRAPGSG PGSPYSSSLAKAGLNGALYHLEYSPERGKAEGRASAYSLGSQLTPDRCELRFEAPRHP GLGAPGQSPDSYCSPGIHSTPEVPYASLTGIGSRRVAVEGAAGRGAAQQRGALHLRVV GRGRLSRGPAFSSASEHLVQNVCKSYRETCQLRLEDLLRQRPHLFSREEVAGYQRKST WEMWERCARRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEVVLVRMCRAYNA DNHTVFFEGKYGGVELFRALGCGELISSIFDFSRSLSALRLSEDEIALYTALVLINAS RPGLQEKRKVEQLQYNLELAFHHHLCKTHRQGILAKLPPKGKLRSLCSQHVEKLQTFQ HLHPIVVQAAFPPLYKELFSTEIESPEGLSQ" assembly_gap 19481087..19481165 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19487304..19487553 /estimated_length=250 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19490707..19492289 /estimated_length=1583 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19494860..19495104 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19504195..19504249 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19508410..19509045 /estimated_length=636 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19509704..19509745 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19519754..19520561 /estimated_length=808 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 19522327..19525975 /estimated_length=3649 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(ALWS01086890.1:1..34548,gap(34),ALWS01086891.1:1..34019, gap(55),ALWS01086892.1:1..3285,gap(3420),ALWS01086893.1:1..12655, gap(39),ALWS01086894.1:1..9748,gap(1777),ALWS01086895.1:1..12273, gap(49),ALWS01086896.1:1..29554,gap(23),ALWS01086897.1:1..9066, gap(39),ALWS01086898.1:1..3142,gap(3407),ALWS01086899.1:1..9292, gap(710),ALWS01086900.1:1..9889,gap(3010),ALWS01086901.1:1..17090, gap(115),ALWS01086902.1:1..19654,gap(141),ALWS01086903.1:1..10787, gap(24),ALWS01086904.1:1..17820,gap(57),ALWS01086905.1:1..1101, gap(42),ALWS01086906.1:1..5885,gap(41),ALWS01086907.1:1..61768, gap(419),ALWS01086908.1:1..40172,gap(511),ALWS01086909.1:1..7239, gap(27),ALWS01086910.1:1..924,gap(94),ALWS01086911.1:1..6037, gap(528),ALWS01086912.1:1..47347,gap(28),ALWS01086913.1:1..10987, gap(40),ALWS01086914.1:1..11206,gap(70),ALWS01086915.1:1..16124, gap(20),ALWS01086916.1:1..5753,gap(63),ALWS01086917.1:1..775, gap(19),ALWS01086918.1:1..1862,gap(16),ALWS01086919.1:1..76181, gap(75),ALWS01086920.1:1..19280,gap(37),ALWS01086921.1:1..1165, gap(36),ALWS01086922.1:1..16192,gap(19),ALWS01086923.1:1..12555, gap(687),ALWS01086924.1:1..49157,gap(50),ALWS01086925.1:1..59656, gap(106),ALWS01086926.1:1..4279,gap(78),ALWS01086927.1:1..28149, gap(28),ALWS01086928.1:1..13312,gap(69),ALWS01086929.1:1..4706, gap(339),ALWS01086930.1:1..8583,gap(522),ALWS01086931.1:1..18210, gap(38),ALWS01086932.1:1..13961,gap(1289),ALWS01086933.1:1..47218, gap(16),ALWS01086934.1:1..4266,gap(23),ALWS01086935.1:1..14470, gap(84),ALWS01086936.1:1..11429,gap(58),ALWS01086937.1:1..9296, gap(39),ALWS01086938.1:1..3457,gap(2890),ALWS01086939.1:1..3359, gap(174),ALWS01086940.1:1..9661,gap(40),ALWS01086941.1:1..205, gap(18),ALWS01086942.1:1..10265,gap(16),ALWS01086943.1:1..19937, gap(39),ALWS01086944.1:1..13195,gap(639),ALWS01086945.1:1..7657, gap(23),ALWS01086946.1:1..9146,gap(19),ALWS01086947.1:1..676, gap(181),ALWS01086948.1:1..7336,gap(616),ALWS01086949.1:1..2083, gap(83),ALWS01086950.1:1..13771,gap(45),ALWS01086951.1:1..60979, gap(4594),ALWS01086952.1:1..6232,gap(5582),ALWS01086953.1:1..15887, gap(39),ALWS01086954.1:1..70956,gap(2079),ALWS01086955.1:1..1928, gap(620),ALWS01086956.1:1..11775,gap(50),ALWS01086957.1:1..31735, gap(29),ALWS01086958.1:1..67068,gap(44),ALWS01086959.1:1..71264, gap(33),ALWS01086960.1:1..25607,gap(693),ALWS01086961.1:1..2023, gap(11),ALWS01086962.1:1..3451,gap(218),ALWS01086963.1:1..30966, gap(14),ALWS01086964.1:1..10520,gap(70),ALWS01086965.1:1..1006, gap(33),ALWS01086966.1:1..61359,gap(1600),ALWS01086967.1:1..15809, gap(1682),ALWS01086968.1:1..22668,gap(52),ALWS01086969.1:1..8085, gap(305),ALWS01086970.1:1..57938,gap(40),ALWS01086971.1:1..3207, gap(74),ALWS01086972.1:1..12966,gap(33),ALWS01086973.1:1..13585, gap(48),ALWS01086974.1:1..18964,gap(14),ALWS01086975.1:1..33017, gap(22),ALWS01086976.1:1..10873,gap(18418),ALWS01086977.1:1..17652, gap(21),ALWS01086978.1:1..20709,gap(32),ALWS01086979.1:1..14033, gap(88),ALWS01086980.1:1..21511,gap(43),ALWS01086981.1:1..25067, gap(18),ALWS01086982.1:1..12742,gap(736),ALWS01086983.1:1..17986, gap(16),ALWS01086984.1:1..54614,gap(16),ALWS01086985.1:1..24618, gap(55),ALWS01086986.1:1..1917,gap(110),ALWS01086987.1:1..16481, gap(41),ALWS01086988.1:1..9861,gap(11),ALWS01086989.1:1..10121, gap(17),ALWS01086990.1:1..5604,gap(15),ALWS01086991.1:1..17773, gap(324),ALWS01086992.1:1..3305,gap(29),ALWS01086993.1:1..10267, gap(211),ALWS01086994.1:1..30066,gap(29),ALWS01086995.1:1..82725, gap(16),ALWS01086996.1:1..13788,gap(42),ALWS01086997.1:1..2275, gap(12),ALWS01086998.1:1..114246,gap(10),ALWS01086999.1:1..11527, gap(38),ALWS01087000.1:1..42592,gap(105),ALWS01087001.1:1..9585, gap(443),ALWS01087002.1:1..52183,gap(20),ALWS01087003.1:1..9059, gap(3336),ALWS01087004.1:1..6267,gap(25),ALWS01087005.1:1..100910, gap(29),ALWS01087006.1:1..18659,gap(122),ALWS01087007.1:1..3099, gap(1450),ALWS01087008.1:1..17278,gap(130),ALWS01087009.1:1..5999, gap(259),ALWS01087010.1:1..29988,gap(155),ALWS01087011.1:1..9192, gap(34),ALWS01087012.1:1..3670,gap(2960),ALWS01087013.1:1..62736, gap(129),ALWS01087014.1:1..28747,gap(52),ALWS01087015.1:1..29881, gap(57),ALWS01087016.1:1..20624,gap(31),ALWS01087017.1:1..6092, gap(149),ALWS01087018.1:1..302,gap(30),ALWS01087019.1:1..17768, gap(323),ALWS01087020.1:1..22472,gap(45),ALWS01087021.1:1..19607, gap(20),ALWS01087022.1:1..3838,gap(114),ALWS01087023.1:1..1228, gap(608),ALWS01087024.1:1..16256,gap(649),ALWS01087025.1:1..24726, gap(41),ALWS01087026.1:1..10334,gap(98),ALWS01087027.1:1..5070, gap(15),ALWS01087028.1:1..84522,gap(43),ALWS01087029.1:1..14300, gap(50),ALWS01087030.1:1..20246,gap(32),ALWS01087031.1:1..15983, gap(54),ALWS01087032.1:1..27179,gap(24),ALWS01087033.1:1..1242, gap(21),ALWS01087034.1:1..50336,gap(99),ALWS01087035.1:1..3990, gap(12),ALWS01087036.1:1..18094,gap(707),ALWS01087037.1:1..3963, gap(98),ALWS01087038.1:1..51679,gap(43),ALWS01087039.1:1..25238, gap(65),ALWS01087040.1:1..9901,gap(436),ALWS01087041.1:1..14869, gap(229),ALWS01087042.1:1..23393,gap(39),ALWS01087043.1:1..10968, gap(31),ALWS01087044.1:1..57388,gap(26),ALWS01087045.1:1..20538, gap(47),ALWS01087046.1:1..6234,gap(18),ALWS01087047.1:1..2955, gap(147),ALWS01087048.1:1..17006,gap(29),ALWS01087049.1:1..47469, gap(360),ALWS01087050.1:1..15679,gap(44),ALWS01087051.1:1..45090, gap(51),ALWS01087052.1:1..1504,gap(55),ALWS01087053.1:1..8479, gap(101),ALWS01087054.1:1..2581,gap(23),ALWS01087055.1:1..2862, 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