LOCUS KB030407 13457055 bp DNA linear CON 19-MAR-2015 DEFINITION Pteropus alecto unplaced genomic scaffold scaffold110, whole genome shotgun sequence. ACCESSION KB030407 ALWS01000000 VERSION KB030407.1 DBLINK BioProject: PRJNA171993 BioSample: SAMN01103203 KEYWORDS WGS. SOURCE Pteropus alecto (black flying fox) ORGANISM Pteropus alecto Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus. REFERENCE 1 (bases 1 to 13457055) AUTHORS Zhang,G., Cowled,C., Shi,Z., Huang,Z., Bishop-Lilly,K.A., Fang,X., Wynne,J.W., Xiong,Z., Baker,M.L., Zhao,W., Tachedjian,M., Zhu,Y., Zhou,P., Jiang,X., Ng,J., Yang,L., Wu,L., Xiao,J., Feng,Y., Chen,Y., Sun,X., Zhang,Y., Marsh,G.A., Crameri,G., Broder,C.C., Frey,K.G., Wang,L.F. and Wang,J. TITLE Comparative analysis of bat genomes provides insight into the evolution of flight and immunity JOURNAL Science 339 (6118), 456-460 (2013) PUBMED 23258410 REFERENCE 2 (bases 1 to 13457055) AUTHORS Zhang,G., Cowled,C. and Wang,L. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.06 Genome Coverage :: 110x Sequencing Technology :: Illumina HighSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..13457055 /organism="Pteropus alecto" /mol_type="genomic DNA" /submitter_seqid="scaffold110" /db_xref="taxon:9402" /chromosome="Unknown" /sex="male" /tissue_type="kidney" /geo_loc_name="Australia: Anglican Church Grammer School, East Brisbane" /collection_date="Nov-2008" gene <343..>68629 /locus_tag="PAL_GLEAN10014264" mRNA join(<343..437,1404..1621,3903..3970,5146..5259, 7799..7963,9715..9861,12452..12595,14677..14805, 19454..19549,20987..21094,24066..24366,27357..27438, 28956..29124,30892..30976,31895..31965,32675..32997, 35186..35309,36651..36708,41889..41942,42644..42732, 44007..44093,48286..48322,48672..48839,49970..50034, 51721..51795,54237..54363,56328..56422,57724..57842, 60916..60981,63101..63311,63438..63533,66810..66904, 68110..>68629) /locus_tag="PAL_GLEAN10014264" /product="Ubiquitin carboxyl-terminal hydrolase 40" CDS join(343..437,1404..1621,3903..3970,5146..5259,7799..7963, 9715..9861,12452..12595,14677..14805,19454..19549, 20987..21094,24066..24366,27357..27438,28956..29124, 30892..30976,31895..31965,32675..32997,35186..35309, 36651..36708,41889..41942,42644..42732,44007..44093, 48286..48322,48672..48839,49970..50034,51721..51795, 54237..54363,56328..56422,57724..57842,60916..60981, 63101..63311,63438..63533,66810..66904,68110..68629) /locus_tag="PAL_GLEAN10014264" /note="GO_function: GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]" /codon_start=1 /product="Ubiquitin carboxyl-terminal hydrolase 40" /protein_id="ELK17093.1" /db_xref="InterPro:IPR001394" /db_xref="UniProtKB/Swiss-Prot:Q9NVE5" /translation="MGGTGNLWAARPEEGEVTGRPGRPRDAASGVGVIFSFTMFGDLF EEDYSSVSNNQYGKGKKLKTKALEPPAPREFTNLSGIRNQGGTCYLNSLLQTLHFTPE FREALFSLDPEELGSLEEKDKPDAKVRIIPLQLQRLFAQLLLVDQEAASTADLTDSFG WTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLISRLYHGTIVNQIVCKECKNVSE KQEDFLDLTVAVKNVSGLEDALWNMYVEEEVFDYDNLYHCGTCDRLVNAAKSAKLRKL PPFLTVSLLRFNFDFVKCERYKETSCYTFPLQINLKPFCEQTELDDLEYMYDLFSVII HKGGCYGGHYHVYIKDVDHLGNWQFQEEKSKPDANLKDIQNEDKIDDPLMILKAILLQ EESNLIPVDQLGQKLLKKIGISWNKKFRKQHGPLRKFLKLHSQIFLLSSDGNTVSLLK NCSLQAESGFQRSDQQIFKTLPSESPGLNDRSSCPHWFDINDSRVQPIREKDIEQQFE GKESAYMLFYRKSQLQRPPEARANPRYRVPCHLLNEMDAANIELQTKRAECDSTNNNF ELHLHMGPHYHFFNGALHPVSQTESVWDLIFDKRKTLGDLRQSIFQLLEFWEGDMVLS VAKFLPAGLHVYQTLDGDDLALCELDLADEEDIFVWNGVEVGGAQIPTGSDCEPLLLN VLHLATSSEGEKCEHLTESTHVFPSNAEVGSVFTALAIPAGVAFVVSAEPAGEEHWTA IPEGDLKRTFKEQGLRNGSSLLVQDSSNDDNSLLTKQGKWITSANEINWIQVKNVCQS QSEEEQVKIPATVNTVVFDIRIKAIKELKLMKELAENSCLRPFDRNGKLLCPVPDSYT LKEAELKMGSSLGLCPGKAPTSSQLFLFFAVGSDIQPGTEMEIIVEETISVRDCLKIM LEKSGLAGNIMHMRDLNAGYCEAASRGSHIGELAEASRCVRPTALPFSDLIRVEAVAP LSGREGDKWHLRKMDWCYEAGEPLCEEGAALTELTIRSGDTLLLIEGKLPPLGFLKVP IWWYQPQGTSGQWKSHLDQANCTPSQGGVWRPPSTQGAPGDTHAEVPLCYLGDVDISE EATLVELKSQAMTLPAFSEFLVPSPAFLRAWTVESKRPGRLLRMDQQQLREYKLGRRT EICLEPLQKGENLGPQEVLLRTQMRLPGVRAYGLPQDLVWDTARGGTAGTLRQRVADF YSLPVEKIEVAKYFPEKFEWLPVSSWNQQITKRKKKKKQESLQGAPYYLKDGDTIGVK NLLVDDDEDFSTVRDDVGKEKQKQLALGKKKSHSKSPDLVEPTVPVTVPVTVPVTVPV TASVSPAAKKPFGCRAAAFSPVQRHLAGPRDQKLLSPSTSAVSDSSGSHQCTCRHRTR LVLVPVPKQLLARHGRQRARGLGVPATNSPLPRAGTPSGPRLPHEPTAASSRQASALH HWATQRAPEGAGTDLATSHRCRSDAASHHT" assembly_gap 24972..25451 /estimated_length=480 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 38628..38690 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<77010..>146135) /locus_tag="PAL_GLEAN10014265" mRNA complement(join(<77010..77099,77807..77937,78930..79047, 83454..83573,84379..84471,84551..84662,86112..86263, 86520..86654,87623..87736,88770..88877,89096..89192, 91004..91114,93958..94054,95305..95433,96557..96706, 97213..97486,97565..97664,97763..97857,98951..99038, 99872..100011,102785..102893,105528..105690, 106409..106511,106632..106757,107060..107166, 107972..108104,108376..108480,144329..144409, 145995..>146135)) /locus_tag="PAL_GLEAN10014265" /product="Diacylglycerol kinase delta" CDS complement(join(77010..77099,77807..77937,78930..79047, 83454..83573,84379..84471,84551..84662,86112..86263, 86520..86654,87623..87736,88770..88877,89096..89192, 91004..91114,93958..94054,95305..95433,96557..96706, 97213..97486,97565..97664,97763..97857,98951..99038, 99872..100011,102785..102893,105528..105690, 106409..106511,106632..106757,107060..107166, 107972..108104,108376..108480,144329..144409, 145995..146135)) /locus_tag="PAL_GLEAN10014265" /note="GO_function: GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007205 - activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]" /codon_start=1 /product="Diacylglycerol kinase delta" /protein_id="ELK17094.1" /db_xref="InterPro:IPR000756" /db_xref="InterPro:IPR001206" /db_xref="InterPro:IPR001660" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR002219" /db_xref="InterPro:IPR010993" /db_xref="InterPro:IPR011510" /db_xref="UniProtKB/Swiss-Prot:Q16760" /translation="MLMSPFLWFQTVIKEGVLSKQNSSFQRSRRRYFKLRGRTLYYAK TAKSIIFDEVDLTDASVAESSTKNVNNSFTVITPCRKLILCADNRKEMEDWIAALKTV QNREHFEPTQYSMDHFSGMHNWYACSHARPTYCNVCREALSGVTSHGLSCEVCKFKAH KRCAVRATSNCKWTTLASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCTVCDKTCGSVL RLQDWRCLWCKAMVHTACKESLLTRCPLGLCKVSVIPPTALNSIDSDGFWKATCPPSC TSPLLVFVNSKSGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDTFRILV CGGDGSVGWVLSEIDSLNLHKQCQLGVLPLGTGNDLARVLGWGSACDDDTQLPQILEK LERASTKMLDRWSVMAYETKPPRPASSSTVVTEDFSEGSEVQQILFYEDSVAAHLSKI LTSDQHSVVISSAKVLCETVKDFVARVGKAYEKTAEGSEESEAVAKKCSVLKEKLDSL LKTLDDESQALSSLPTPPPTIAEEAEDGDGLGSGCGSAVDRSVGSACPARPQIFRPRE QLMLRANSLKKAIRQIIEHTEKAVDEQNAQTQEQERLVLGLSESEGKKDLKSDDRLCH SGSCAAAKCRSLRKVSRSPCEKLISKGSLSLGSSASLPPQSGNRDGLPALNTKILFPN VRAGMSGSLPGGSVISRLLINADPFNSEPENLEYYTEKCVMNNYFGIGLDAKISLDFN NKRDEHPEKCRSRTKNMMWYGVLGTKELLHRTYKNLEQKVLLECDGRPIPLPSLQGIA VLNIPSYAGGTNFWGGTKEDDTFAAPSFDDKILEVVAVFGSMQMAVSRVIKLQHHRIA QCRTVKISILGDEGVPVQVDGEAWIQPPGYIRIIHKNRAQMLTRDRAFESTLKSWEDK QKCELPRPPSFSLHAETLSEEEATQMDQFGQAAGALIHSIREIAQSHRDMEQELAHAV NASSKAMDRVYNKPRTAEGLTGSGVLDMVNNFRALRSETELLLAGRVALQLDPPQKER LGAALAEMDQQLRKLADAPWLCQPTEPSDEENVTLDLSKRSRSGKFRLVTKFKKEKNN KNREAHGSLGAPAHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSELLHLERRDLKDL GVTKVGHMKRILCGIKELSRSPPAAEA" assembly_gap 88113..88144 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 113535..113582 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 146520..147314 /estimated_length=795 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 150563..150585 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 159146..159221 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 170899..171490 /estimated_length=592 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<180521..>203157) /locus_tag="PAL_GLEAN10014268" mRNA complement(join(<180521..180785,183439..183516, 185610..185747,188062..188134,190081..190165, 191166..191301,192253..192329,195966..196159, 197857..197910,199811..199895,203095..>203157)) /locus_tag="PAL_GLEAN10014268" /product="S-arrestin" CDS complement(join(180521..180785,183439..183516, 185610..185747,188062..188134,190081..190165, 191166..191301,192253..192329,195966..196159, 197857..197910,199811..199895,203095..203157)) /locus_tag="PAL_GLEAN10014268" /note="GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007600 - sensory perception [Evidence IEA]" /codon_start=1 /product="S-arrestin" /protein_id="ELK17095.1" /db_xref="InterPro:IPR000698" /db_xref="InterPro:IPR011021" /db_xref="InterPro:IPR011022" /db_xref="InterPro:IPR014756" /db_xref="UniProtKB/Swiss-Prot:P08168" /translation="MAASKSTPNQVIFKKISRDKSNPYLFLPQVTIYLGKRDYIDHVD QVEPVDGVVLVDPELVIFLASWSLFVSVTCAFRYGQEDIDVIGLSFRRDLYFSRVQVF PPVGAATTSTKLQETLMKKLGDNTYPFLLTCCGVDFEVKAFATDSADGEDEKIPRKSS VRLLIRKVQHAPTKMGPQPRAEAAWQFFMSDKPLHLAVSLSKEIYFHGEPIPVTVTVT NNTEKTVKKIKALVEQVANVVLYSSDYYVKPVASEEAQEKVPPNSTLTTTLTLVPLLA NNRERRGIALDGKIKHEDTNLASSTIIKEGIDRTVLGILVSYQIKVKLTVSGEVATEV PFRLMHPQPQDPGQSCSALGFLWSLSACRFITCLLLGFLDPVTEPGLAVASSRCLGQP RKRCSSLSHELGASPSSVSAWRT" assembly_gap 180888..180906 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 193017..193042 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<211998..>245934) /locus_tag="PAL_GLEAN10014269" mRNA complement(join(<211998..212091,212752..212853, 213669..213716,213856..214005,216119..216224, 216463..216583,221414..221485,222184..222254, 225273..225378,227777..227882,228774..228830, 229489..229575,231915..231980,235276..235527, 236392..236465,237416..237521,242267..242360, 245820..>245934)) /locus_tag="PAL_GLEAN10014269" /product="Autophagy-related protein 16-1" CDS complement(join(211998..212091,212752..212853, 213669..213716,213856..214005,216119..216224, 216463..216583,221414..221485,222184..222254, 225273..225378,227777..227882,228774..228830, 229489..229575,231915..231980,235276..235527, 236392..236465,237416..237521,242267..242360, 245820..245934)) /locus_tag="PAL_GLEAN10014269" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Autophagy-related protein 16-1" /protein_id="ELK17096.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR013923" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="InterPro:IPR020472" /db_xref="UniProtKB/Swiss-Prot:Q676U5" /translation="MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLE KSDLHSVLAQKLQAEKPDIPNRHEISPGHDGAWSDSQLQEMAQLKMKHQEELTELHKK RGELAQLVIDLNNQMQQKDREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQ TLKDEYDALQITFTALEEKLRKTSEENQELVTRWMAEKAQEANRLNAENEKDSRRRQA RLQKELAEAAKEPLPVEQDDDIEVIVDETTEHTEETSPMRAISRAATKRLSQPAGGLL DSITNIFGRRSVSSLPVPQDSADTHPGSSGKEVRVPTTALCAFDAHDGEVNAVQFSPG SRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASR IWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAG SSCNDIVCTEQCVMSGHFDKKIRFWDIRSETIVREMELLGKITALDLNPERTELLSCS RDDLLKIIDLRVNAVRQTFSASGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLS GKVEKVLSKQHGSPVNAVAWAPSGSHVVSVDKGSRAVLWSEY" assembly_gap 220054..220345 /estimated_length=292 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 225117..225187 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 236707..236716 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 241377..241771 /estimated_length=395 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 254028..254037 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 260636..260697 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<271445..>334655) /locus_tag="PAL_GLEAN10014271" mRNA complement(join(<271445..271635,272548..273164, 276806..277072,278953..279049,279884..280033, 282912..282999,285676..285758,286989..287102, 289307..289396,292879..292960,297236..297324, 297491..297599,299102..299240,299832..299928, 302464..302581,303053..303249,305264..305366, 307174..307280,316626..316836,317827..317898, 318063..318143,322898..322985,328803..328943, 332183..332354,334523..>334655)) /locus_tag="PAL_GLEAN10014271" /product="Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 1" CDS complement(join(271445..271635,272548..273164, 276806..277072,278953..279049,279884..280033, 282912..282999,285676..285758,286989..287102, 289307..289396,292879..292960,297236..297324, 297491..297599,299102..299240,299832..299928, 302464..302581,303053..303249,305264..305366, 307174..307280,316626..316836,317827..317898, 318063..318143,322898..322985,328803..328943, 332183..332354,334523..334655)) /locus_tag="PAL_GLEAN10014271" /note="GO_function: GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA]" /codon_start=1 /product="Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 1" /protein_id="ELK17097.1" /db_xref="InterPro:IPR000300" /db_xref="InterPro:IPR005135" /db_xref="UniProtKB/Swiss-Prot:Q92835" /translation="MRFFTKLDQLIEFYKKENMGLVTHLQYPVPLEEEEAGDEPEEET EGVPSPPELPPRNILLSAGPCEAKEAPLLSENPRATEFSRPSLSETLFQRLQSMDTSG LPEEHLKAIQDYLSTQLTLDSDFMKTGCTSLPHLKKLTVFLCKELYGEVIRTLPSLES LQRLFDQQLSPGLRPRPQVPGEANPINMVTKLSQLTSLLSSIEDKVKALLHEGPESPH RRSLIPPVTFEVKAESLGIPQKLQLKVDVESGKLIIKKTKDSSEDKFYSHNKSKAPHH SRNAFIVLVSAPAGDQPVVGGWRILQLIKSQKFLNKLVILVETEKEKTLRKEYVFADS KKREGFCQLLQQMKNKHSEQPEPDMITIFIGTWNMGNAPPPKKITSWFLSKGQGKTRD DSADYIPHDIYVIGTQEDPLGEKEWLEILKNSLQEITSMTFKTITIHTLWNIRIVVLA KPEHENRISHICTDNVKTGIANTLGNKGAVGVSFMFNGTSLGFVNSHLTSGSEKKLRR NQNYMNILRFLALGDKKLSPFNITHRFTHLFWLGDLNYRVELPTWEAETIIQKIKQQQ YADLLSHDQLLMERKDQKVFLHFEEEEITFAPTYRFERLTRDKYAYTKQKATGMKYNL PSWCDRVLWKSYPLVHVVCQSYGSTSDIMTSDHSPVFATFEAGVTSQFVSKNGPGTVD SQGQIEFLSCYATLKTKSQTKFYLEFHSSCLESFVKSQEGENEEGSEGELVVKFGETL PKLKPIISDPEYLLDQHILISVKSSDSDESYGEGCIALRLEATETQLPIYTPLTHHGE MTGHFRGEIKLQTSQGKKREKLYDFVKTERDESSGPKSLKTLTSHDPAKQWEPANRVP LCSGSSITEIINPSYMGVGPFTHMKQALSPEQQPTAWSYDQPFKDPSLGPGRGESPPT PPSQPPISPKKFSPATTSRSPCPRTQESRPSDVGKNTVEPLPQEDPKLAKPEMFENPL YGSVSSFPKLVPRKEQESPKMLRKEPPPCPDPGTMSPSIMLSKSQEAEGSKATGKLVP PPTPFLSPTPRLRSYTCSPAPESRPAAGDKGQGKPKAPASSQAPVPAKRPIKPSRSEL SQQAPPTPAQRPPLPVKSPAVLHLQHSKGRDYRENAELPHHGKHRPEDSPLGRAALQV RWVKPLVSCQRDRSPEEQRKATRTPAGTSCGLLLPSFLGRTLDFSGETQLVWSAADAG CETRPRG" assembly_gap 276374..276729 /estimated_length=356 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 285332..285375 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 295145..295175 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 311023..311061 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 341047..341114 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 342434..342445 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 388685..388754 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<400622..>403025) /locus_tag="PAL_GLEAN10014274" mRNA complement(join(<400622..401560,402825..>403025)) /locus_tag="PAL_GLEAN10014274" /product="Sialidase-2" CDS complement(join(400622..401560,402825..403025)) /locus_tag="PAL_GLEAN10014274" /codon_start=1 /product="Sialidase-2" /protein_id="ELK17098.1" /db_xref="InterPro:IPR002860" /db_xref="InterPro:IPR011040" /db_xref="UniProtKB/Swiss-Prot:Q9Y3R4" /translation="MASCSVLQKERVFQSGAHAYRIPALLYLPQQKTLLAFAEKRTSK KDEHAELIILRRGSYDASTQQVQWHAQEEVAQAQLEGHRSMNPSPVYDEKTGILFLFF IAIPSQISEHHQLHSRVNVTLLCQVTSTDHGRSWSPARDLTSSAIGPAYKEWATFAVG PGHCLQLHNRTQSLVVPAYAYRNLQGHQQPCPFSFCFISHDHGLTWERGSFVTQDTLE CQVAEVGGAKQRVVYLNARSSLHARVQAESTNDGLDFGGIQPVQKLVEPPHGCHGSVV SFPSPSGESESSGTWLLYTHPTDPQQRSNLGAYLNTRPPAPEAWSQPTLLARGSCAYS DLQSLGTGLDGSPQFGCLYESDNYEEIVFLMFTLKQAFPAEFSSR" assembly_gap 404556..404894 /estimated_length=339 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 413308..413334 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 427581..427610 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <441061..>505889 /locus_tag="PAL_GLEAN10014275" mRNA join(<441061..441322,445056..445170,473346..473488, 478947..479245,494786..494946,496151..496303, 497692..497821,498639..498713,500959..501048, 502002..502165,502618..502773,503450..503529, 504224..504328,505699..>505889) /locus_tag="PAL_GLEAN10014275" /product="Ephexin-1" CDS join(441061..441322,445056..445170,473346..473488, 478947..479245,494786..494946,496151..496303, 497692..497821,498639..498713,500959..501048, 502002..502165,502618..502773,503450..503529, 504224..504328,505699..505889) /locus_tag="PAL_GLEAN10014275" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]" /codon_start=1 /product="Ephexin-1" /protein_id="ELK17099.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR001849" /db_xref="UniProtKB/Swiss-Prot:Q8N5V2" /translation="METRYPEDVEKPREKSGSGSWEVDEPAKVRPEFGSGEERMPHAD QIEDKEPHRYIPIQRNSIFNHTVRHKSKDTARDAREPKAGLRAGSLENGKSLKEPRTL NLPQSGMSLWQIPTRTNPGAQRTSESSSTPGNGTTPEECPALADSPTTLTEALQRIHP IPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIRANTPGSPASEEMDGEEEE EEEEELASPPERKALPQICLLSNPHSRFNLWQDLPEIRSSGVLDILQPEEIKLQEAMF ELVTSEASYYKSLSLLVSHFMENERLKKILHPSESHILFSNVLDVMAVSERFLLELER RMEENVVISDVCDIVHHYAANDFSVYITYVSNQTYQERTYKQLLQEKAAFRELITQLE LDPKCRGLPLSSFLILPFQRITRLKLLVQNILKRVEERSERECTASDAHRELELVVKA CNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTK KLFQEIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLL ENSDDREATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQ PDELTLELADILNILDKTEDGWIFGERLHDQERGWFPSNTTEEILNPKIRSQNLKECF RVHKMDDPQRSQNKDRRKLGSRNRQ" assembly_gap 441543..441603 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 452416..452486 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 465612..465658 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 472180..472497 /estimated_length=318 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 479999..480015 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 485099..485392 /estimated_length=294 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 489514..489581 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 508616..509032 /estimated_length=417 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 513087..513121 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 522853..523075 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<529362..>542910) /locus_tag="PAL_GLEAN10014278" mRNA complement(join(<529362..529429,533336..533483, 538878..539033,541934..542056,542854..>542910)) /locus_tag="PAL_GLEAN10014278" /product="PERQ amino acid-rich with GYF domain-containing protein 2" CDS complement(join(529362..529429,533336..533483, 538878..539033,541934..542056,542854..542910)) /locus_tag="PAL_GLEAN10014278" /codon_start=1 /product="PERQ amino acid-rich with GYF domain-containing protein 2" /protein_id="ELK17100.1" /db_xref="UniProtKB/Swiss-Prot:Q6Y7W8" /translation="MSVTAVTADTFRTLNPPAPLPSSSTWGQQSSTTACQSQATLSLA EIQKLEEERERQLREEHSNLHTSIGNSVWGSINTGPPNQWASDLVTNIWSNADTKNSN MGFWDDAVKEDSVWGMNHSALHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSL LGFSVNASSERLNMGEIETLDDY" assembly_gap 534744..535848 /estimated_length=1105 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<547628..>612856) /locus_tag="PAL_GLEAN10014279" mRNA complement(join(<547628..547834,548974..549135, 551011..551111,552781..552881,553887..553994, 555027..555118,558102..558268,564040..564199, 565187..565383,568345..568533,568616..568778, 568870..569087,572445..572624,593707..593747, 594554..594665,598793..598904,607557..607652, 608570..608699,612819..>612856)) /locus_tag="PAL_GLEAN10014279" /product="PERQ amino acid-rich with GYF domain-containing protein 2" CDS complement(join(547628..547834,548974..549135, 551011..551111,552781..552881,553887..553994, 555027..555118,558102..558268,564040..564199, 565187..565383,568345..568533,568616..568778, 568870..569087,572445..572624,593707..593747, 594554..594665,598793..598904,607557..607652, 608570..608699,612819..612856)) /locus_tag="PAL_GLEAN10014279" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="PERQ amino acid-rich with GYF domain-containing protein 2" /protein_id="ELK17101.1" /db_xref="InterPro:IPR003169" /db_xref="UniProtKB/Swiss-Prot:Q6Y7W6" /translation="MTALLPGRDQSWRLRALSSGGSITSPPLSPALPKYKLADYRYGR EEMLALFLKDNKIPSDLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLR LTGRGGGGTVVGAPRGRSSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSW EERGDRRFEKPGRKDVGRPNFEEGGPASVGRKHEFIRSESENWRIFREEQNGEDEDGG WRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGS IDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVEEGEECS DSEGSHNEEAKEPDKTHKKEAEKTDRIGVEASEDTPQTLTSSARPGTPSGHQPQEAPP FERKEEPKTEQTEKAEEESRTENSLSTKVPSRGDEMVPDVQQPLSQIPSDTASPLLIL PPPVPSSGPALRPVGTPVVGAPGMGGVSAEPDEEEGLKHLEQQAEKMVAYLQDSALDD ERLASKPQEHRAKGVSIPLVHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSL LVKRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHL QYQQFLIQQQYAQVLAQQQKAALSSQQQQQLALLLQQFQALKMRIADQNVISSVTRSV SVPDTGSIWEPQPTASQPPVWEGGSVWDLPLDTATPGPALEQLQQMEKAKAAKLEQER REAEMRAKREEEERKRQEELRRQQEDILRRQQEEERKRREEEELVRRKQEEALRRQRE QEIALRRQREEEERQQQEEALRRMEERRREEEERRKQEELLRKQVTRWLTLLTVARTR S" assembly_gap 557512..557558 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 623932..623954 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<645867..>681748) /locus_tag="PAL_GLEAN10014281" mRNA complement(join(<645867..646001,654798..654932, 660882..661029,681738..>681748)) /locus_tag="PAL_GLEAN10014281" /product="EF-hand domain-containing protein D1" CDS complement(join(645867..646001,654798..654932, 660882..661029,681738..681748)) /locus_tag="PAL_GLEAN10014281" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="EF-hand domain-containing protein D1" /protein_id="ELK17102.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:Q17QM6" /translation="MFKLYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKSMIKEVDED FDGKLSFREFLLIFHKAAAGELQEESGLMALAKLSEIDVALEGVRGAKDFFEAKVQAL SSASKFEAELKAEQEERKREEEKRRIRQAAFRELKAAFST" assembly_gap 658784..658805 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 670439..670684 /estimated_length=246 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 681890..682266 /estimated_length=377 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 682555..682604 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 716337..716379 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 721972..721982 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<722209..>735991) /locus_tag="PAL_GLEAN10014282" mRNA complement(join(<722209..722254,725181..725251, 727099..727135,728838..728974,729072..729224, 730415..730519,734292..734426,735433..735547, 735912..>735991)) /locus_tag="PAL_GLEAN10014282" /product="Eukaryotic translation initiation factor 4E type 2" CDS complement(join(722209..722254,725181..725251, 727099..727135,728838..728974,729072..729224, 730415..730519,734292..734426,735433..735547, 735912..735991)) /locus_tag="PAL_GLEAN10014282" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0003743 - translation initiation factor activity [Evidence IEA]; GO_process: GO:0006413 - translational initiation [Evidence IEA]" /codon_start=1 /product="Eukaryotic translation initiation factor 4E type 2" /protein_id="ELK17103.1" /db_xref="InterPro:IPR001040" /db_xref="UniProtKB/Swiss-Prot:O60573" /translation="MTRGRPELKLQQWGRVGEMVRSGKKGRLKDDDSGDHDQNEENST QKDGEKEKMERDKSQSISKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNI KQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLR KGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRD TLRRVLNLPPNTIMEYKTHTDSIKTPGRLGPQRLLFRTACGLSLPHSEVGCEAHAAHD TWAWEEFHGLVNSSGR" assembly_gap 740517..741013 /estimated_length=497 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<742774..>748504) /locus_tag="PAL_GLEAN10014284" mRNA complement(join(<742774..742947,743242..743375, 743588..743804,744503..744608,744813..744927, 745109..745309,745639..745736,747275..747384, 747868..748007,748444..>748504)) /locus_tag="PAL_GLEAN10014284" /product="Acetylcholine receptor subunit gamma" CDS complement(join(742774..742947,743242..743375, 743588..743804,744503..744608,744813..744927, 745109..745309,745639..745736,747275..747384, 747868..748007,748444..748504)) /locus_tag="PAL_GLEAN10014284" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]" /codon_start=1 /product="Acetylcholine receptor subunit gamma" /protein_id="ELK17104.1" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:P13536" /translation="MEAGPSPLGQMGPLCSLPSPGAQGRNQEERLLADLMHNYDPHLR PAERDSDLVNVSLKLTLTNLISLQWCDYRLRWDPQDYEGLWVLRVPSAMVWRPDVVLE NKSQTYSTNEINLQLSQEDGQTIEWIFIDPEAFTENGEWAIRHRPAKMLLATEAPAEE AGHQKVVFCLLIQRKPLFYVINIIAPCVLISSVAILIYFLPAKAGGQKCTVAINVLLA QTVFLFLVAKKVPETSQAVPLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMAR GVFLRLLPQLLRMHIRPLAPVAVQKARPQLQNGSSAGWPLTGGEEVARRLPRSELLFR QRQRHGLVRAALEKLEKGPEPGQSQELCGSLKQAAPAIQACVEACNFIARARHQQSHF DSGNEEWFLVGRVLDRVCFLAMLSLFVCGTAGIFLMAHYNRVPPLPFPGDPRPYLPSP D" assembly_gap 746568..746608 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 747528..747574 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<753251..>760245) /locus_tag="PAL_GLEAN10014287" mRNA complement(join(<753251..753433,754089..754505, 755377..755491,755581..755692,757923..758032, 758450..758838,759793..759935,760194..>760245)) /locus_tag="PAL_GLEAN10014287" /product="Acetylcholine receptor subunit delta" CDS complement(join(753251..753433,754089..754505, 755377..755491,755581..755692,757923..758032, 758450..758838,759793..759935,760194..760245)) /locus_tag="PAL_GLEAN10014287" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]" /codon_start=1 /product="Acetylcholine receptor subunit delta" /protein_id="ELK17105.1" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:P02716" /translation="MKGPVLTLGLLAALVMCGWGLNEEERLIRHLFVEKHYNKELRPA ARKEESVQISLALTLSNLISLGWTDSRLQWDEEEFGNISVLRLPPDMLWLPEIVLENK LSGSPARPPLSLGLASSRAMSLPLQTQASDCPPSSASPSPAIPKLAGAHCGPCPCPSA MTAPSRFPTPATCWSVLQDLTYFPFDWQNCSLKFSSLKYTAKEITLSLKQDEEDGRSY PVEWVIIDPEGFTGGEKTSMAISVLLAQSVFLLLISKRLPATSLAIPLIGKFLLFGMV LVTMVVVICVIVLNIHFRTPSTHVLSEGVKKLFLETLPELLHMSRPAEDGPGPSALIR RSSSLGYISKAEEYFSLKSRSDLMFEKQSARHGLAQRLTTARGSPVAWGLFGPAVGGG VGAGLMPTSGLTSTGRPPAGSEQAQEELFSELKPAVDGANFIVNHMRDQNSYNEEKDC WNRVARTVDRLCLFVVTPIMIVGTAWIFLQGAYNQPPPQPFPGDPFSYLEQDKRFI" assembly_gap 756766..756926 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 761226..761240 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 770911..770945 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 794743..795267 /estimated_length=525 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <796164..>803230 /locus_tag="PAL_GLEAN10014289" mRNA join(<796164..796949,797535..797603,797703..797813, 797889..797981,798140..798264,798942..799164, 799668..799766,799986..800060,800277..800380, 800681..800863,801501..801568,801762..801886, 802225..802290,802648..802743,802945..803021, 803131..>803230) /locus_tag="PAL_GLEAN10014289" /product="Endothelin-converting enzyme-like 1" CDS join(796164..796949,797535..797603,797703..797813, 797889..797981,798140..798264,798942..799164, 799668..799766,799986..800060,800277..800380, 800681..800863,801501..801568,801762..801886, 802225..802290,802648..802743,802945..803021, 803131..803230) /locus_tag="PAL_GLEAN10014289" /note="GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_function: GO:0008237 - metallopeptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Endothelin-converting enzyme-like 1" /protein_id="ELK17106.1" /db_xref="InterPro:IPR008753" /db_xref="InterPro:IPR018497" /db_xref="UniProtKB/Swiss-Prot:Q9JHL3" /translation="MEAPYSMTAHYDEFQEVKYVSRCGTGGARGSSLPPGFPLGAGRS ASGARAGLPRWNRREVCLLSGLVFAAGLCAILAAMLALKYLGPGAAGGGTCSEGCPER KAFARAARFLAANLDASIDPCQDFYSFACGGWLRRHAIPDDKLTYGTIAAIGEQNEER LRRLLARPGGGPGGAAQRKVRAFFRSCLDMREIERLGPRAMLEVIEDCGGWDLGGGTD RPGTAARWDLNRLLYKAQGVYSAAALFSLTVSLDDRNSSRYVIRIDQDGLTLPEKTLY LAQDEESEKILAAYRVFMERLLSLLGADAVEQKAREILQLEQRLANITVSEYDDLRRD VSSMYNKVTLGQLQKITPHLRWKWLLDQIFQENFSEDEEVVLLATDYMQQVSQLIRST PRRILHNYLVWRVVVVLSEHLSPPFREALHELAREMEGSDKPQELARVCLGQANRHFG MALGALFVHEHFSATSKAKVQQLVGDIKYILGQRLEELDWMDAETKAAARAKLQYMMV MVGYPDFLLKPEAVDKEYEFEVHEKTYFKNILNSIRFSIQLSVKKIRQEVDKSTWLLP PQALNAYYLPNKNQMGKGPVLAGAGSEVGQSPANQTLPVVFPAGILQPTLYDPDFPQS LNYGGIGTIIGHELTHGYDDWGGQYDRSGNVLHWWTEASYSRFLRKAECIVHLYDNFT VYNQRVNGKHTLGENIADMGGLKLAYYAYQKWVREHGPEHPLHRLKYTHNQLFFIAFA QNWCIKRRSQSIYLQVLTDKHAPEHYRVLGSVSQFEEFGRAFHCPKDSPMNPAHKCSV W" assembly_gap 810188..810200 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 815344..815591 /estimated_length=248 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 816337..818400 /estimated_length=2064 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 825859..830003 /estimated_length=4145 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<839452..>1080657) /locus_tag="PAL_GLEAN10014291" mRNA complement(join(<839452..839604,840155..840256, 841496..841600,841752..841882,842231..842369, 845205..845291,845953..846136,872138..872217, 903075..903308,915334..915441,927876..927991, 955689..955768,987186..987359,994599..994670, 1000288..1000535,1002488..1002588,1031230..1031464, 1079992..1080149,1080609..>1080657)) /locus_tag="PAL_GLEAN10014291" /product="DIS3-like exonuclease 2" CDS complement(join(839452..839604,840155..840256, 841496..841600,841752..841882,842231..842369, 845205..845291,845953..846136,872138..872217, 903075..903308,915334..915441,927876..927991, 955689..955768,987186..987359,994599..994670, 1000288..1000535,1002488..1002588,1031230..1031464, 1079992..1080149,1080609..1080657)) /locus_tag="PAL_GLEAN10014291" /note="GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0004540 - ribonuclease activity [Evidence IEA]" /codon_start=1 /product="DIS3-like exonuclease 2" /protein_id="ELK17107.1" /db_xref="InterPro:IPR001900" /db_xref="UniProtKB/Swiss-Prot:Q8IYB7" /translation="MESTLAPGGLTYKWSGGVSSVVGPHGVGASPGDKKSKNKSVRGK KKSIFETYMSKEDVSEGLKRGTLIQVIKPESCDKETDGAYESDLPEELCGSHLLQQSL KGDNDSPDVIIEAQFDDSDSEDGHGNTQSVLVDGVKKLSGWVHEKGKEDAGASGTKDE STSVAQDTRALPEKSLQRSAKVVYIVEKKHSRAAAGFLKLLADKNSELFKKYALFSPS DHRVPRIYVPLKDCPQDFVTRPKDYADTLFICRIVDWKEDSNFALGCFQPPFFSVHIN MKLFTLKLQDLSHLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTI PPEELSKRRDLRKDCVFTIDPSTARDLDDALSCKPLADGNAYEVGVHIADVSYFVPEE SDLDKVAAERATSVYLVQKVVPMLPRPLCEELCSLNPMTDKLTFSVIWTLTPEGKILD EWFGRTVICSCTKLSYEHAQSMIESPTESILGTELPPMSPEHTREEVHRAVLSLHRIA KELRKQRFSDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVA HKIFRAFPERALLRRHPPPQTKMLSDLEEFCDQMGLPMDFSSAGALNKSLTKLFGNDK YSLARKEVLTNMCSRPMQYFCSGALQDQEQFRHYALNVPLYTHFTSPIRRFADIMVHR LLAAALGYREPPGVEPDALQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLESE AMVLGVLNQAFDVLVLRYGVQKRIYCNALPLRSHRFQKVGKKPELMLVWEPETLEQEP VQQVITIFSLVEVVLRAETAALKYSAILKHPGTEGLLGPQDREGHDHEDEQED" assembly_gap 842006..842018 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 842379..842605 /estimated_length=227 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 867844..867864 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 873859..873893 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 878260..878274 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 925340..925566 /estimated_length=227 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 949741..950213 /estimated_length=473 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 961857..961984 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1002611..1002627 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1031497..1031513 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1038300..1039233 /estimated_length=934 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1047283..1047319 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1065647..1065714 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1066319..1066371 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1072779..1073481 /estimated_length=703 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1102314..1102497 /estimated_length=184 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1112301..1112342 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1131691..1131776 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1137463..>1138565 /locus_tag="PAL_GLEAN10014295" mRNA join(<1137463..1137834,1138278..>1138565) /locus_tag="PAL_GLEAN10014295" /product="C-type natriuretic peptide" CDS join(1137463..1137834,1138278..1138565) /locus_tag="PAL_GLEAN10014295" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005179 - hormone activity [Evidence IEA]" /codon_start=1 /product="C-type natriuretic peptide" /protein_id="ELK17108.1" /db_xref="InterPro:IPR000663" /db_xref="InterPro:IPR002406" /db_xref="UniProtKB/Swiss-Prot:P55207" /translation="MGAGTEGEPPRPAPGYRRACHWPGRPGGREDDISRRLDYKGASG AADSERTQPALRSSGTRVRIAHRSRASLLRALLPACTRCRQCASLHPTGTMHLSQLLA CVLLLMLLSLRPSEAKPGAAPKVQRTPQGEELAVSQAEGGGQKKRDKTPGGGGANPKG DQSRLFRDLRVETKARAAWARHLQENPNARKNKGIKKGSNKGCFGLKLDRIGSTSGLG C" assembly_gap 1139604..1139641 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1164644..1164928 /estimated_length=285 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1190300..>1206582) /locus_tag="PAL_GLEAN10014296" mRNA complement(join(<1190300..1190458,1196040..1196145, 1197961..1198163,1199911..1199999,1202462..1202537, 1206421..>1206582)) /locus_tag="PAL_GLEAN10014296" /product="COP9 signalosome complex subunit 7b" CDS complement(join(1190300..1190458,1196040..1196145, 1197961..1198163,1199911..1199999,1202462..1202537, 1206421..1206582)) /locus_tag="PAL_GLEAN10014296" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="COP9 signalosome complex subunit 7b" /protein_id="ELK17109.1" /db_xref="InterPro:IPR000717" /db_xref="UniProtKB/Swiss-Prot:Q2KI56" /translation="MAGEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFG ELLELANVQELAEGANAPYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIV SLASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGR DIQKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHSRTQQQVEAEVTNIKK TLKATASSSAQEMEQQLAERECPPHTEQRQPTKKMSKVKGLVSSRH" assembly_gap 1194001..1194203 /estimated_length=203 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1200610..1200869 /estimated_length=260 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1214248..1214283 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1221324..1221343 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1223064..1223181 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1233370..1234302 /estimated_length=933 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1244157..>1250283 /locus_tag="PAL_GLEAN10014297" mRNA join(<1244157..1244473,1246712..1246800,1247417..1247542, 1248274..1248379,1250202..>1250283) /locus_tag="PAL_GLEAN10014297" /product="Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta" CDS join(1244157..1244473,1246712..1246800,1247417..1247542, 1248274..1248379,1250202..1250283) /locus_tag="PAL_GLEAN10014297" /codon_start=1 /product="Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta" /protein_id="ELK17110.1" /db_xref="InterPro:IPR008015" /db_xref="InterPro:IPR014756" /db_xref="UniProtKB/Swiss-Prot:Q9XT54" /translation="MTALQERSDEYYPLPRPKELLAFPRMLCDCGFRATELGIQMPKP KSCAHLQLHQDQERRSGFSSCYTAKESQPPTGEGRLQVAVGKRVWLLGNNNNNKKTPK LYPLNWMNLRDAETGKILWQGTEDLSVPEVEHEARVPKKILKCKAVSRELNFSSAEQM EKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVII ETKFFDDDLLVSTSRVRLFYV" assembly_gap 1262309..1262528 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1262535..>1266410) /locus_tag="PAL_GLEAN10014298" mRNA complement(join(<1262535..1262824,1263325..1263421, 1263652..1263723,1266366..>1266410)) /locus_tag="PAL_GLEAN10014298" /product="Prothymosin alpha" CDS complement(join(1262535..1262824,1263325..1263421, 1263652..1263723,1266366..1266410)) /locus_tag="PAL_GLEAN10014298" /codon_start=1 /product="Prothymosin alpha" /protein_id="ELK17111.1" /db_xref="InterPro:IPR004931" /db_xref="UniProtKB/Swiss-Prot:P06454" /translation="MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEEN GEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAEAATGKRAAEDDEVGSGLR GRGLGSCTVAGGADGTQVCLGCCMFLSGSLILNRKEHGPSFPDPLELPVGAEEVGGWA QWVGRGP" assembly_gap 1264618..1264867 /estimated_length=250 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1265526..1265542 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1265867..1265903 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1266845..1266892 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1299498..1299610 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1323550..1323579 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1324266..1324491 /estimated_length=226 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1336792..>1337910) /locus_tag="PAL_GLEAN10014299" mRNA complement(<1336792..>1337910) /locus_tag="PAL_GLEAN10014299" /product="hypothetical protein" CDS complement(1336792..1337910) /locus_tag="PAL_GLEAN10014299" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17112.1" /db_xref="UniProtKB/Swiss-Prot:Q53QW1" /translation="MTTVPSEEATATSISTHGDSRSSESPTLGSQSQASLRADVPVAN GTSASAEWQDVDQASIKPDTSEAVSLPGDKDKHEDAAEFSQEPKLVHLAPGSLQMSVS LQNQVQDRPVQNARMTQSLQIFQHGSLVNEETPQTAGVLDGEQELALSTPSAVAQSPQ NVPAVSTADADIQLDTLATGTTEAVVEKPERPEALHPDTEALPSAEFQVVPELDVTHY SGDLQAPPSPRGSVPPLPGPSIAALGRPLDSSLYMASGEDNYLHSMTSLLAGGEGSIR SLADVLVWSEDTLGMATGLLASSRSSVTDLLRSTGPRLRSASSILRNASLVISSGLAA GTNSAMLFIVRMLERAEQRTIEGIRSAVRYLTSHLTPR" assembly_gap 1338628..1338925 /estimated_length=298 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1355485..1355778 /estimated_length=294 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1357436..>1361032 /locus_tag="PAL_GLEAN10014300" mRNA join(<1357436..1358285,1360650..>1361032) /locus_tag="PAL_GLEAN10014300" /product="Neuromedin-U receptor 1" CDS join(1357436..1358285,1360650..1361032) /locus_tag="PAL_GLEAN10014300" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0001607 - neuromedin U receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="Neuromedin-U receptor 1" /protein_id="ELK17113.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR005390" /db_xref="InterPro:IPR005391" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q9HB89" /translation="MSPRDARSPVLCNGSRALGLFDPEDLNLTDEQLRLKYLGPQQTE LFVPICVTYLLIFVVGAVGNGLTCTVILCHKAMRTPTNYYLFSLAVSDLLVLLVGLPL ELYEMWRNYPFLLGAGGCFFRTLLFETVCLASVLNVTALSVERYVAVVHPLQARSVVT RTHVRRVLGAVWGLAVLCSLPNSSLHGIQQLDLPCRGTVPGSAVCTLVRPRALYNLVV QTTTLLFFCLPMATISVLYLLIGLRLRHEKLLLLRQGAKSRARASDSRRLWRLQDRSR RQVTKMLFALVVVFATCWAPFHIDRLMWSFVSHWTEGLHLAFQYVHVISGVFFYLSSA ANPVLYSLMSSRFRNSFWKALCLGTWCHHCRPCRSSHRLSKVTTGSTLCDVGSLGNRA RPLAENGDPEGRQETDPV" assembly_gap 1369484..1369526 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1372784..>1391473 /locus_tag="PAL_GLEAN10014301" mRNA join(<1372784..1372940,1373847..1373970,1375636..1375793, 1391382..>1391473) /locus_tag="PAL_GLEAN10014301" /product="Nucleolin" CDS join(1372784..1372940,1373847..1373970,1375636..1375793, 1391382..1391473) /locus_tag="PAL_GLEAN10014301" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="Nucleolin" /protein_id="ELK17114.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q4R4J7" /translation="MFAEKLISPHRKGATWAKLPKDRSAKLGDHEKRNENREEDEVKT RELDPDEEDQNAKTLLIKNLPDKVTQHELKEVFEDAFQISLVSKDGMSKRIAYVDFKS QANAERAREEKQGTEVGGLAIVLDSVAEKSQGQEDRDGQSRTQRAGPNLLDVEEKADD VSGRGAAAGDSGTVII" assembly_gap 1394320..1396348 /estimated_length=2029 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1396733..>1401995 /locus_tag="PAL_GLEAN10014303" mRNA join(<1396733..1397171,1397558..1397740,1397850..1397936, 1398129..1398270,1398681..1398805,1399657..1399780, 1400206..1400363,1400835..1400958,1401193..1401326, 1401865..>1401995) /locus_tag="PAL_GLEAN10014303" /product="Nucleolin" CDS join(1396733..1397171,1397558..1397740,1397850..1397936, 1398129..1398270,1398681..1398805,1399657..1399780, 1400206..1400363,1400835..1400958,1401193..1401326, 1401865..1401995) /locus_tag="PAL_GLEAN10014303" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="Nucleolin" /protein_id="ELK17115.1" /db_xref="InterPro:IPR000504" /db_xref="UniProtKB/Swiss-Prot:Q4R4J7" /translation="MVSPTKKVAVATPAKKAVVTPGKKAAATPAPGKKAAVTPAKAVA TPGKKGATPGKALVATPGKKGAATPAKGAKNGKNAKKEDSDEEDDDSEEEDEDEEEED EDEDEFEPAVMKAAAAAPASDDDEDEDDDDDEDDDDDEDDDEEDDSEEEPMEITPAKG KKTPAKAVPVKAKSTAEDEDEEEDDEDDEEEEEEDDEEEEEEEEEEEEPVKEAPGKRK KEMAKQKAAPEAKKQKVEATEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVV DVRIGVSRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKDRDARTLLA KNLPYKVTQDELKEVFEDAMEIRLVSKDGKSKGIAYIEFKTEADAEKTLEEKQGTEID GRSISLYYTGEKGQSQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIK VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPS KTLFVKGLSEETTEETLKESFDGSVRARIVTDRETGSSKG" assembly_gap 1402349..1402823 /estimated_length=475 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1418347..1418396 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1418687..1418735 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1423033..1423073 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1425499..1425539 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1427458..1427811 /estimated_length=354 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1453328..1453337 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1459326..>1459694 /locus_tag="PAL_GLEAN10014306" mRNA <1459326..>1459694 /locus_tag="PAL_GLEAN10014306" /product="hypothetical protein" CDS 1459326..1459694 /locus_tag="PAL_GLEAN10014306" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17116.1" /translation="MYWVSRRARPRVRREGRGLGEHIPERQAGCFPGQPSQKIQKALP SRGHQSLALARTWRGTRHGKRMAPFLGLGPTEWSFLNVSSSSQDKLTPNRLKGQETLG VRVSLCGCLSVVCLSASPEL" gene complement(<1463493..>1541348) /locus_tag="PAL_GLEAN10014307" mRNA complement(join(<1463493..1463612,1469606..1469710, 1497782..1497837,1541165..>1541348)) /locus_tag="PAL_GLEAN10014307" /product="LisH domain-containing protein ARMC9" CDS complement(join(1463493..1463612,1469606..1469710, 1497782..1497837,1541165..1541348)) /locus_tag="PAL_GLEAN10014307" /codon_start=1 /product="LisH domain-containing protein ARMC9" /protein_id="ELK17117.1" /db_xref="UniProtKB/Swiss-Prot:Q5R629" /translation="MAWSGLLCVRGSPGRCSRTAYGRVRVTSEMGTVVGSVSCGRARR PGWSGGHRAVGDVVTRCEELPDGVLESDDDEDEDDEEDHDTMEADLDKDELIQPQLGE LSGEKLLTTEYLGIMTNTGKTRRKGPGSVQWSGAEPLRRPVTPGGHRNGYPV" assembly_gap 1469956..1469990 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1474306..1474368 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1502124..1503090 /estimated_length=967 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1514968..1515009 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1518783..1519022 /estimated_length=240 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1534206..1534273 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1535687..1539907 /estimated_length=4221 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1544618..1549332 /estimated_length=4715 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1550221..>1551837) /locus_tag="PAL_GLEAN10014310" mRNA complement(join(<1550221..1550477,1551654..>1551837)) /locus_tag="PAL_GLEAN10014310" /product="LisH domain-containing protein ARMC9" CDS complement(join(1550221..1550477,1551654..1551837)) /locus_tag="PAL_GLEAN10014310" /codon_start=1 /product="LisH domain-containing protein ARMC9" /protein_id="ELK17118.1" /db_xref="UniProtKB/Swiss-Prot:Q5R629" /translation="MPGRPSRLWVSLSPAVLVPPLQITPEYLQSVCARLFSNQMRQSL AHSVDFTRPGTVRLCAHETLQQLHQQLVEAERRSMTYLKRYNKIQADYHNLIGVTAEL VDSLEATVSGKMVSKTPIRSRLFRDQEVAWAWAVLTVIPGPSQP" assembly_gap 1553338..1557494 /estimated_length=4157 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1558097..1558132 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1560973..>1561404 /locus_tag="PAL_GLEAN10014311" mRNA <1560973..>1561404 /locus_tag="PAL_GLEAN10014311" /product="hypothetical protein" CDS 1560973..1561404 /locus_tag="PAL_GLEAN10014311" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17119.1" /translation="MQVDDDDDDEEEEEEEKEEEWTPFYASKPEAVCQAAAEQKQRGR GHCQEPQSKTHTPGPVYDAQHAGYEKAGTGPKPARARGLDQRRREQAWGAEETSWDVS LDGQNCAGGTVTSESSKAAAWRPSEHSMLTPEGHSCTSAPP" assembly_gap 1562610..1562645 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1567925..>1570779) /locus_tag="PAL_GLEAN10014312" mRNA complement(join(<1567925..1568053,1568747..1568902, 1570214..1570405,1570774..>1570779)) /locus_tag="PAL_GLEAN10014312" /product="LisH domain-containing protein ARMC9" CDS complement(join(1567925..1568053,1568747..1568902, 1570214..1570405,1570774..1570779)) /locus_tag="PAL_GLEAN10014312" /codon_start=1 /product="LisH domain-containing protein ARMC9" /protein_id="ELK17120.1" /db_xref="UniProtKB/Swiss-Prot:Q2KI89" /translation="MQRDLIAAFDSGDQKAFFASWEEHVPSSLRDGDTLARKLEFYLH IHFAIYLLKHSVGRPVGRFVLRDKEDLDERISYFKTYLETKGAALSQTTEFLPFYALP FVPNPRAHPSFKELFQTQCVAVPSSFIVQQNSSVTPEEQPAIRRSGGRLTRDSWLAVE " gene complement(<1572835..>1575383) /locus_tag="PAL_GLEAN10014314" mRNA complement(join(<1572835..1572980,1575344..>1575383)) /locus_tag="PAL_GLEAN10014314" /product="hypothetical protein" CDS complement(join(1572835..1572980,1575344..1575383)) /locus_tag="PAL_GLEAN10014314" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17121.1" /translation="MAGGVAGPEEGWTGIEDEAVEQGGGIHPGEAALEFVGVIVDKFL KMSQQGPWGQGWGYSHN" assembly_gap 1581015..1581066 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1589983..1590191 /estimated_length=209 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1593656..>1675722) /locus_tag="PAL_GLEAN10014315" mRNA complement(join(<1593656..1593802,1607000..1607146, 1607660..1607746,1609239..1609331,1610198..1610367, 1615013..1615115,1623273..1623389,1626136..1626250, 1655274..1655338,1656401..1656496,1657417..1657613, 1658337..1658448,1660017..1660190,1660667..1660745, 1661219..1661307,1662506..1662634,1663559..1663619, 1665005..1665087,1665178..1665231,1667022..1667165, 1669769..1669974,1672979..1673148,1673338..1673411, 1675708..>1675722)) /locus_tag="PAL_GLEAN10014315" /product="26S proteasome non-ATPase regulatory subunit 1" CDS complement(join(1593656..1593802,1607000..1607146, 1607660..1607746,1609239..1609331,1610198..1610367, 1615013..1615115,1623273..1623389,1626136..1626250, 1655274..1655338,1656401..1656496,1657417..1657613, 1658337..1658448,1660017..1660190,1660667..1660745, 1661219..1661307,1662506..1662634,1663559..1663619, 1665005..1665087,1665178..1665231,1667022..1667165, 1669769..1669974,1672979..1673148,1673338..1673411, 1675708..1675722)) /locus_tag="PAL_GLEAN10014315" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="26S proteasome non-ATPase regulatory subunit 1" /protein_id="ELK17122.1" /db_xref="InterPro:IPR002015" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q5R5S4" /translation="MPRDMEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQF AALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAD LPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPG MLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDIL EKLNLRTVGTPIASVPGSTNTGTVPGSEKDSDSMETEEKTGSVPVGKTPEASPEPKDQ TLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCG TTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAY QEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYD LLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIA LVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVN DDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAI NLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAK FGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTP TCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKE KEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQ PFKPLSIGGIIILKDTSEDVEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD" assembly_gap 1603366..1606073 /estimated_length=2708 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1683377..>1715780) /locus_tag="PAL_GLEAN10014316" mRNA complement(join(<1683377..1683516,1686911..1687024, 1689427..1689621,1715390..>1715780)) /locus_tag="PAL_GLEAN10014316" /product="hypothetical protein" CDS complement(join(1683377..1683516,1686911..1687024, 1689427..1689621,1715390..1715780)) /locus_tag="PAL_GLEAN10014316" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17123.1" /db_xref="UniProtKB/Swiss-Prot:A6NCS6" /translation="MKKGKRKKPDARRRGSNSQHGSSESTSASAPQQITSVSTPQQPS SAPAPQQITSGSTPQQPSPAPAPQQPSSAPAPQQTTSASTSQQPSSGSTSQQPESQAL PGPESSQSARGLLCQKPGTKSSPGAKKTVAEAGPEDAVAPGLRLLEALLRTVFGHQAG GPVQAAVYCPGHPASSLAVQAAACRVLQAAGPARPVEGAWERPGLPALLACFSWGPWS RGKDADATSPSVPAQDTFQDSEEELALTAIFPNGDCEDPEKGSRACDGVVHPPAEPPG ASR" assembly_gap 1688414..1688456 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1689631..1690105 /estimated_length=475 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1692790..1692833 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1719038..>1778569) /locus_tag="PAL_GLEAN10014317" mRNA complement(join(<1719038..1719355,1774631..1774763, 1777611..>1778569)) /locus_tag="PAL_GLEAN10014317" /product="hypothetical protein" CDS complement(join(1719038..1719355,1774631..1774763, 1777611..1778569)) /locus_tag="PAL_GLEAN10014317" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17124.1" /translation="MGHDAHTKLFDDKVVAENIQAAVDIGETQGQLQEQADVLPSSAL HDKAVPHQELQEETQMDRKKRDHKDSQTGRYRPDAGPLLDPLLGVVPTADQNVNAPEG AETYDTHGKKKAKYLEGDEDLGAPGAVGHVVEARVLFYFPVEVVNGDTPGPHQDPDGA ADPEDLPGGPAVADQERVLDGQEPVQANEADREDAAVHADKVDTLRQGTEGWEGSPHV VQDHLEREGEHQQQVEDCQVDHVDGGGGILRPPPLQEGVEASDGQQVEKQAQEEGGDV GRQPHDFHQLIHVMEGAVLAFVELTHVLSYINDRVGRVHLTLQNWAASKIQVTYSWGQ QPPPHLTCCLGPLKAPVLASSGIHANQLVAPLRDEEAEARRRMETLLCSVFAAPRAAV EVHTAVFSPCRPEGILDFQRTAGQAHKVAARGCVPVVDRGTQTDGEEPEGEGWERQRP RASPPHPVGNFKYRGRPVR" assembly_gap 1719404..1719685 /estimated_length=282 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1725093..1725112 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1725867..1725930 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1738703..1738728 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1747989..1748055 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1760375..1760426 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1762343..1762396 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1794910..1795113 /estimated_length=204 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1795521..1795596 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1805223..>1809725) /locus_tag="PAL_GLEAN10014319" mRNA complement(join(<1805223..1805314,1805857..1806007, 1806513..1806623,1807358..1807546,1809651..>1809725)) /locus_tag="PAL_GLEAN10014319" /product="Integral membrane protein 2C" CDS complement(join(1805223..1805314,1805857..1806007, 1806513..1806623,1807358..1807546,1809651..1809725)) /locus_tag="PAL_GLEAN10014319" /codon_start=1 /product="Integral membrane protein 2C" /protein_id="ELK17125.1" /db_xref="InterPro:IPR007084" /db_xref="UniProtKB/Swiss-Prot:Q06AV4" /translation="MGMVVLLMGLVFASVYIYRYFFLAQLARDNFFHCGVFYEDSLSS QARTRMELEEDVKIYLEDNYERINVPVPQFGGGDPADIIHDFQRGLTAYHDISLDKCY VIELNTTIVLPPRNFWELLMNVKRGTYLPQTYIIQEEMVVTEHVSDKEALGSFIYHLC NGKDTYRLRRRATRRRINKRGAKSCNAIRHFENTFVVETVICGVV" assembly_gap 1805691..1805799 /estimated_length=109 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1807827..1808025 /estimated_length=199 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1813633..1813696 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1817228..1817609 /estimated_length=382 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1840837..>1863677) /locus_tag="PAL_GLEAN10014320" mRNA complement(join(<1840837..1841025,1841638..1841781, 1845160..1845225,1848237..1848296,1863546..>1863677)) /locus_tag="PAL_GLEAN10014320" /product="Calcium-binding protein 39" CDS complement(join(1840837..1841025,1841638..1841781, 1845160..1845225,1848237..1848296,1863546..1863677)) /locus_tag="PAL_GLEAN10014320" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Calcium-binding protein 39" /protein_id="ELK17126.1" /db_xref="InterPro:IPR013878" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q9Y376" /translation="MKEILYGTNEKEPQTEAVAQLAQELYNSGLLGTLVADLQLIDFE DLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMT KYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEF LSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA" assembly_gap 1869616..1869708 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1871548..1871557 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1883286..1883324 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1887857..1888609 /estimated_length=753 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1916028..1916568 /estimated_length=541 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1931307..1931326 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1953532..1953577 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1973750..1973798 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1977241..1977276 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1984920..>1988604 /locus_tag="PAL_GLEAN10014321" mRNA join(<1984920..1985075,1988272..>1988604) /locus_tag="PAL_GLEAN10014321" /product="Nuclear autoantigen Sp-100" CDS join(1984920..1985075,1988272..1988604) /locus_tag="PAL_GLEAN10014321" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]" /codon_start=1 /product="Nuclear autoantigen Sp-100" /protein_id="ELK17127.1" /db_xref="InterPro:IPR004865" /db_xref="UniProtKB/Swiss-Prot:P23497" /translation="MFPIFQNKETIVHEILNHFKKNKVEIANAITKPFPFFESLRDLS FITEEMYNDSQEACRNLVPVGKVVYQMLCNLEKTFDGSLXXXXXXLKEYPDLIPIHRS FENGNQLFPLPLGVHVSFIYLLSHSFNKYSQNAYHVPGPVVGGVNISNSEQNRHVLRS HH" assembly_gap 1988365..1988381 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1994623..1994669 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2002488..>2090568) /locus_tag="PAL_GLEAN10014322" mRNA complement(join(<2002488..2002745,2003520..2003663, 2004220..2004291,2004578..2004698,2006369..2006484, 2012962..2013000,2015183..2015325,2016974..2017078, 2018368..2018415,2022899..2022955,2032254..2032307, 2033292..2033348,2037518..2037601,2038214..2038267, 2039387..2039476,2040120..2040173,2041232..2041315, 2042885..2042968,2043696..2043842,2046150..2046233, 2046682..2046828,2049439..2049501,2050769..2050852, 2053650..2053818,2054004..2054166,2079937..2079962, 2088946..2089008,2089752..2089895,2090488..>2090568)) /locus_tag="PAL_GLEAN10014322" /product="Nuclear autoantigen Sp-100" CDS complement(join(2002488..2002745,2003520..2003663, 2004220..2004291,2004578..2004698,2006369..2006484, 2012962..2013000,2015183..2015325,2016974..2017078, 2018368..2018415,2022899..2022955,2032254..2032307, 2033292..2033348,2037518..2037601,2038214..2038267, 2039387..2039476,2040120..2040173,2041232..2041315, 2042885..2042968,2043696..2043842,2046150..2046233, 2046682..2046828,2049439..2049501,2050769..2050852, 2053650..2053818,2054004..2054166,2079937..2079962, 2088946..2089008,2089752..2089895,2090488..2090568)) /locus_tag="PAL_GLEAN10014322" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Nuclear autoantigen Sp-100" /protein_id="ELK17128.1" /db_xref="InterPro:IPR000770" /db_xref="InterPro:IPR001487" /db_xref="InterPro:IPR001965" /db_xref="InterPro:IPR004865" /db_xref="InterPro:IPR010919" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR019787" /db_xref="UniProtKB/Swiss-Prot:P23497" /translation="MKPYLGCQKCHRESEVLTRQMGPEEQLRKETSQCVGELMILNDI KKKLNKRSYFKVGMFVRDMRLIFRSHRASYKCSDFVLMKIRLEKEFEKNFKELHSASY VEGMPAEDQNIDKKVFCEIVFSHFRRHKVEIANAIKKPFPFLEVLRDRGHISNKMYDD SQESARNLVPVQRVVYNVLSTLETTFDLSLLEALFSEVNMQEYPDLIQIRKSFENAIQ EKICYQESDNEEREERTTTQLSLEQGTGENSYHSLTWAQPDSLNNSGTTSPENGLSEH LSEIEQINARRNTTNGSSDALESQQADERQAQESESAESCEQVPIQVNNGDAREETAS SLSGAEERAKLPNHEIKINSCSVLLRDIKKEKPYFNSRNQQQAEARTDCNQASDIIVI SSEDSAESSDEDEPSEAHTGELRRQPVFNDFGSLESSEAEETQEATCSGLHTALATTG VRKSPTCRKRLWKTVRRSDDSSESSADAVPFRAWRSELRSGPDKDPEDIGNQSTWEMS NKKRRINDGDYSELNNREEHQETSSSALRHESGVPRSQEARTEGSHASDMMDAMDIEY NSTSEKQSEKRREKKRYTCKIKSLHKGKNKWRKPVNAGPLKRGKKRGPRIPKDENMDF QPPILSVTCGQAKGLLYKDKIKQGISQKCIRMENGTLVTLKEFEIEGKHEKSKNWRLS VRCGGWPLKHLIENGFLPDPPRTRKKPENSNTCKVCRKGGTLYCCDTCPSSFHEKCHI QHIDANRSPWSCIFCQIESIQKSSPESQARYQESEVLERRMLPKEQLKCEFLLLKIYC CSISSYFALKPHYSTELSRALKKPMWLNKIRKKLIRKLYSQVMWFVRDMRLIFQNHKE IYKDTKFINLGSQLETTFETNFQKIFAIQTISFSVSLSPSFCNAARFYLPLRNLTKNM MTPVSSLTILLVQTYHAFFFTFFIAIHLFF" assembly_gap 2011550..2011570 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2027123..2027174 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2051942..2052313 /estimated_length=372 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2056813..2057766 /estimated_length=954 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2085947..2086271 /estimated_length=325 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2091388..>2109852) /locus_tag="PAL_GLEAN10014323" mRNA complement(join(<2091388..2091561,2093337..2093450, 2096594..2096736,2098815..2098919,2105033..2105086, 2106856..2106948,2109771..>2109852)) /locus_tag="PAL_GLEAN10014323" /product="Nuclear body protein SP140-like protein" CDS complement(join(2091388..2091561,2093337..2093450, 2096594..2096736,2098815..2098919,2105033..2105086, 2106856..2106948,2109771..2109852)) /locus_tag="PAL_GLEAN10014323" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Nuclear body protein SP140-like protein" /protein_id="ELK17129.1" /db_xref="InterPro:IPR000770" /db_xref="InterPro:IPR010919" /db_xref="UniProtKB/Swiss-Prot:Q9H930" /translation="MINNFESLESSEKELQEANCSRPQMVPVRRRGDSSESSVKNEHP GAWSPELRSDPDEKGTVNLEKNSTLGKSKGKRRLKVNTNESVNFQSEILPVTCGTVKG MLYKNKLKQGAIVKSIQSEDGNWFTPREFEVKGGYEKSSNWKLSVRCGGKTLKRLMEI PPPGLHRTPQFLLKPLPDVHSKVKEEHTSVRASSQSACWPSGLTGDIDIVLPSSRETQ MYVRSAMMEESCFVATLVQDPFMRTVTCHLWKLRGL" gene complement(<2113326..>2136879) /locus_tag="PAL_GLEAN10014324" mRNA complement(join(<2113326..2113513,2115691..2115771, 2117815..2117983,2119094..2119256,2136848..>2136879)) /locus_tag="PAL_GLEAN10014324" /product="Nuclear autoantigen Sp-100" CDS complement(join(2113326..2113513,2115691..2115771, 2117815..2117983,2119094..2119256,2136848..2136879)) /locus_tag="PAL_GLEAN10014324" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]" /codon_start=1 /product="Nuclear autoantigen Sp-100" /protein_id="ELK17130.1" /db_xref="InterPro:IPR004865" /db_xref="UniProtKB/Swiss-Prot:P23497" /translation="MACGGGNLIARMSAVNQNIDRTLVCEIALKHFKKYKVEISDAIE TTFPFLEILRDRGFITNKIYEDSQDSCRNLVPVQRVVYGVLSEVEKTFDLSLLETLFS DVIMKSYPALNRIYESFKAVIQQGTCQESDEKERKENLNTPKSLEQGTTSPEKGPSEH LSETEQINVKRKYTTNDNNNALESLQVKEQGAQESEPADKTEWRSVMSMK" assembly_gap 2140251..2141876 /estimated_length=1626 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2150112..>2295404 /locus_tag="PAL_GLEAN10014326" mRNA join(<2150112..2150171,2257622..2257782,2260243..2260390, 2262868..2263036,2264389..2264655,2264972..2265049, 2267365..2267442,2269947..2270015,2274929..2275078, 2277086..2277166,2278212..2278370,2280996..2281061, 2281567..2281716,2283990..2284058,2287855..2287953, 2288299..2288441,2292159..2292271,2293024..2293132, 2293367..2293438,2294010..2294150,2295291..>2295404) /locus_tag="PAL_GLEAN10014326" /product="Sp110 nuclear body protein" CDS join(2150112..2150171,2257622..2257782,2260243..2260390, 2262868..2263036,2264389..2264655,2264972..2265049, 2267365..2267442,2269947..2270015,2274929..2275078, 2277086..2277166,2278212..2278370,2280996..2281061, 2281567..2281716,2283990..2284058,2287855..2287953, 2288299..2288441,2292159..2292271,2293024..2293132, 2293367..2293438,2294010..2294150,2295291..2295404) /locus_tag="PAL_GLEAN10014326" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Sp110 nuclear body protein" /protein_id="ELK17131.1" /db_xref="InterPro:IPR000770" /db_xref="InterPro:IPR001487" /db_xref="InterPro:IPR001965" /db_xref="InterPro:IPR004865" /db_xref="InterPro:IPR010919" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR019787" /db_xref="UniProtKB/Swiss-Prot:Q9HB58" /translation="MDSISEKGTVGCNEVQKEGSLGPSLRVAKHRLPVLPTGISRHSP SLPGATPWLTLWLTPTLGKEKEQVTNSAFRMFTMTPALENALLQQFMYQKLEISYAIR KPFPFFEGLRDKSFITERMYRESLEACRNLVPVYRVVYNILSQLEDTFSLSFLQLLFS QINLREYPDLKMILNSFLSVVNSYGGRSKATLTLPEAPANSLERSSCQTLLSLPPPQH PPSRHLTPGPRISTPGASPQHVVEVLGEPSSPAGPARVLLTVTQKKRITPVTNLTTHT NDEADSQQMPSTPSTAMQMIRNDSPEPNNAKELQEASSTAPNKKGKKRKRYSWSTPRK RHKKKSVPRGTASPGYGIQETLQEVNQVTQKKNSSTRNVEVVTRAQKARDECAQTSGL EEVSDDASETNEGKTSQEPPSTPPRIMQDSLDCGSKVSIGKSSGEKRKCKYSAVFYEG GFDVTLTGHYVHQATRDIQARKSQKKRKKNSRSSSKRRQKKSLPKGTASPEHRIQEKL QVADRATQRKDNSTTSSQMVTRAQKAKTKCAQTSGLEEKEREIDVCSSSTRSCQKNTP QKKKNEDETVDFHSPELPVTCGEAKGILYKEMMGKGTSVKCIENEEGVWLTLREFEIE GKKAHSKNWKQSVRCGGLPLAQLIEKTSGNCEVCCRGGPLLCCDTCPRAFHKNCHIPS AEAERSPWSCTFCRMKASSRSRQHRRKSVALARRMSPEEQLKCEFLLLKAYCHPQGSF FVATPRNMKDYAEPFKEAMWLDLMKERLAEKEYTMAWFVRDMRLIFLNHKNFYKASNL SQVGLDLEANFEKDLNELLIFNEANENSFQSLP" assembly_gap 2174325..2177420 /estimated_length=3096 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2183135..2183251 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2187081..2194057 /estimated_length=6977 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2203533..2203602 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2225821..2229140 /estimated_length=3320 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2242222..2242948 /estimated_length=727 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2246304..2246319 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2251135..2253896 /estimated_length=2762 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2285809..2286164 /estimated_length=356 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2293570..2293641 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2302260..2302328 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2317315..2318552 /estimated_length=1238 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2319993..2320043 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2338831..2338906 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2353373..2353552 /estimated_length=180 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2359477..>2377255 /locus_tag="PAL_GLEAN10014330" mRNA join(<2359477..2359735,2365123..2365266,2369647..2369766, 2369828..2370628,2377104..>2377255) /locus_tag="PAL_GLEAN10014330" /product="Monocarboxylate transporter 14" CDS join(2359477..2359735,2365123..2365266,2369647..2369766, 2369828..2370628,2377104..2377255) /locus_tag="PAL_GLEAN10014330" /note="GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Monocarboxylate transporter 14" /protein_id="ELK17132.1" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="UniProtKB/Swiss-Prot:Q7RTX9" /translation="MYTSHEDIGYDFEDDPKDKKTLKPHPDIDGGWAWMMVLSSFFVH ILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRRT AIIGGLVNSLGWVLSAYAANVHYLFITFGVTAGFGSGMAYLPAVVMVGRYFQKRRALA QGLSTTGTGFGAFLSAVSLNLCVCGALMRPLAPEKEGQDAVGRDPQALPAHAAAAEFV KSRGPRGRAAEKEDGREHEEALGDLGAPACAEKAGRAKDMCAFRLLKTVSQLTLRVRK GFWDWYAGYFGAASLFTNRMFVAFIFWALFAYSSFVIPFIHLPEIVNLYNLSEQNDVF PLTSIIAIVHIFGKVILGIVADLPCISVWNVFLMANFTLVLSIFILPLMHTYAGLAVI CALIGFSSGYFSLMPVVTEDLVGIEHLANAYGIIICANGISALLGPPFAGWIYDITQK YDYSFYICGLLYLVGIFFLLIQPCIQIIEQSRKKYMGGARV" assembly_gap 2369768..2369816 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2387476..>2413644) /locus_tag="PAL_GLEAN10014331" mRNA complement(join(<2387476..2387661,2396031..2396203, 2412980..2413108,2413449..>2413644)) /locus_tag="PAL_GLEAN10014331" /product="F-box only protein 36" CDS complement(join(2387476..2387661,2396031..2396203, 2412980..2413108,2413449..2413644)) /locus_tag="PAL_GLEAN10014331" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="F-box only protein 36" /protein_id="ELK17133.1" /db_xref="InterPro:IPR001810" /db_xref="InterPro:IPR022364" /db_xref="UniProtKB/Swiss-Prot:Q8NEA4" /translation="MEMRFASDKPKCLWKSSALTADPLPGSVLCNDIFIHQTMHNGAF PGLVHVTDALWKKNTHRSHLPSPSIQSQVIFRWWKISLRSEYRSAKPGEVKESHPYFL ENSHLQVQIALVFGAKILDYVFNLCEGKLDYLERLSDSLLLHIISYLDLEDIASLSQT SQRFSKLCISDKLWEPIVQSACDDITPEMRALAKDVGWRQLFFANKLQLQQKFRKRGR HGHQRGSQA" assembly_gap 2410297..2410313 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2434544..2434571 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2437014..2437059 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2437995..2438328 /estimated_length=334 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2449902..2453764 /estimated_length=3863 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2454842..2455013 /estimated_length=172 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2491521..>2581225 /locus_tag="PAL_GLEAN10014332" mRNA join(<2491521..2491618,2504621..2505423,2519801..2519906, 2521429..2521565,2527134..2527217,2528230..2528325, 2535426..2535574,2538341..2538376,2538461..2538556, 2539420..2539512,2539709..2539870,2541468..2541536, 2541626..2541791,2544078..2544195,2544313..2544469, 2546306..2546459,2547564..2547792,2548095..2548213, 2550422..2550629,2552874..2552974,2553198..2553372, 2554501..2554642,2555413..2555604,2557226..2557377, 2558963..2559120,2559511..2559584,2559666..2559837, 2561931..2562082,2562984..2563126,2564218..2564374, 2565713..2565811,2571878..2571992,2572265..2572419, 2573398..2573562,2576670..2576834,2579601..2579695, 2580216..2580319,2581029..>2581225) /locus_tag="PAL_GLEAN10014332" /product="Putative E3 ubiquitin-protein ligase TRIP12" CDS join(2491521..2491618,2504621..2505423,2519801..2519906, 2521429..2521565,2527134..2527217,2528230..2528325, 2535426..2535574,2538341..2538376,2538461..2538556, 2539420..2539512,2539709..2539870,2541468..2541536, 2541626..2541791,2544078..2544195,2544313..2544469, 2546306..2546459,2547564..2547792,2548095..2548213, 2550422..2550629,2552874..2552974,2553198..2553372, 2554501..2554642,2555413..2555604,2557226..2557377, 2558963..2559120,2559511..2559584,2559666..2559837, 2561931..2562082,2562984..2563126,2564218..2564374, 2565713..2565811,2571878..2571992,2572265..2572419, 2573398..2573562,2576670..2576834,2579601..2579695, 2580216..2580319,2581029..2581225) /locus_tag="PAL_GLEAN10014332" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO_process: GO:0006464 - protein modification process [Evidence IEA]" /codon_start=1 /product="Putative E3 ubiquitin-protein ligase TRIP12" /protein_id="ELK17134.1" /db_xref="InterPro:IPR000569" /db_xref="InterPro:IPR004170" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR018123" /db_xref="UniProtKB/Swiss-Prot:Q14669" /translation="MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSCSSSSAVIVP QPEDPDRANTSERQKTGQVPKKDNSRGVKRSASPDYNRTNSPSSAKKPKALQHTESPS ETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKSGATGSSRSQKRKRTESSCIKSG SVSESTGAEERSAKPTKLASKSAASAKAGCSTITDSSSAASTSSSSSAVASASSTVPP GARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSSKFDWAARFSPKVSLPKTK LSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTTGSCAS ASRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEIPQGAAASSSVAGAVGM TTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQ GLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHAC RALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQA GGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKS VESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFS LMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL MPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGED EISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQL MKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNH AVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESL LTSPPKACTNGSGSLGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLS DVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSA QSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGS NPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYL TSKSEKDAVNREIRLKRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQM EQFPVKVHDFPSGNGTGGRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPL ALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGE HLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRADGVCPSVSNPLEVYLIPTPPE NITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQD PLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSD SQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEF YALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAK VKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVY HLEDIVRQKKRLEQDKSQTKESLRYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGG KDIPVTIHNLEEYLRLDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNY LKLPDYSSIEIMREKLLIAAREGQQSFHLS" assembly_gap 2501785..2501817 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2529534..2529592 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2575922..2575973 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2605727..2606550 /estimated_length=824 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2632632..2632802 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2634476..2634651 /estimated_length=176 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2638485..2638525 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2652528..>2870189 /locus_tag="PAL_GLEAN10014334" mRNA join(<2652528..2652761,2713031..2713105,2715402..2715496, 2717712..2717878,2743887..2744032,2773431..2773584, 2789244..2789357,2809558..2809782,2835747..2835869, 2855370..2855501,2864903..2865149,2870078..>2870189) /locus_tag="PAL_GLEAN10014334" /product="Delta and Notch-like epidermal growth factor-related receptor" CDS join(2652528..2652761,2713031..2713105,2715402..2715496, 2717712..2717878,2743887..2744032,2773431..2773584, 2789244..2789357,2809558..2809782,2835747..2835869, 2855370..2855501,2864903..2865149,2870078..2870189) /locus_tag="PAL_GLEAN10014334" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Delta and Notch-like epidermal growth factor-related receptor" /protein_id="ELK17135.1" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR013111" /db_xref="UniProtKB/Swiss-Prot:Q8NFT8" /translation="MQASKSCEIRVLTDAQEKKDLALAIELMELIIPTLLINILPAAR SPCSLLRMRTDFTASFPSAEINKSLCSPWKKQQQATVTLPTWQPKTGQKVVEMKWDQV EVIPDIACGNASSNSSAGGRLASFEVPQNTSVKIRQDATASLILLWKVTATGFQQCSL IDGRSVTLLQAPGGLVLLEEMLALGQNHFIGFVNDSVTKSIVALRLTVVVKASTCVPG ASHASDVECSGRGRCTTKPSEATFSCHCDEPYVGTFCEEFDACQRKPCQNSASCVDAK EQQDGSNFTCVCLAGYTGELCQSKIDYCILDSCRNGATCISNLSGFTCQCPEGYFGST CEEKVDPCASSPCQNNASCFADGVRFSCGCSAGFTGPTCAQLVDFCALSPCAHGTCRS VGTSYKCLCDPGYHGLYCEEEYNECLSAPCLNAATCRDLVNGYECVCLAEYKGEECDI DINECDSNPCHHAGTCLDQSNGYTCHCPHGWVGANCEIHLQWKSGHMAESLTNMPRHS LYIIIGALCVAFVLMLIILIVGICRISRIEYQGSSRPAYEEFYSCRSIDSEFSNALAS IRHARFGKKARPAMYDVTPIAYEDYSPDDKPLVTLIKTKDL" assembly_gap 2653731..2654016 /estimated_length=286 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2654555..2655966 /estimated_length=1412 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2667524..2667587 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2750075..2750109 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2754259..2754806 /estimated_length=548 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2810694..2810721 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2847199..2847221 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2889946..2889957 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2916851..2916869 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2919341..2919361 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2927385..2927782 /estimated_length=398 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2935698..2935716 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2957342..2958101 /estimated_length=760 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2977595..2983559 /estimated_length=5965 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2987097..2988582 /estimated_length=1486 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2992860..2993939 /estimated_length=1080 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3001276..3003413 /estimated_length=2138 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3005481..3009005 /estimated_length=3525 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3046067..3046090 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3051304..3051361 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3076115..3076133 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3095806..3095860 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3096202..3096215 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3115000..3115010 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3120023..3120050 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3124903..3124916 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3136217..3136253 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3136577..3136615 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3142733..3142776 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3198714..3198754 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3234642..3234660 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3291268..3291287 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3297214..3297232 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3300693..3300742 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3326457..3327716 /estimated_length=1260 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3330701..3330715 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3356870..3356889 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3360283..3360315 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3388479..3388514 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3451536..3452137 /estimated_length=602 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3454727..3454750 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3464065..3464185 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3466489..3467003 /estimated_length=515 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3484748..3486757 /estimated_length=2010 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3496833..3496862 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3503191..3503225 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3555697..3555754 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3603912..3604042 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3614846..3614884 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3626204..3626215 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3636654..3636669 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3638208..3638242 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3671623..>3757634 /locus_tag="PAL_GLEAN10014337" mRNA join(<3671623..3671898,3689920..3690033,3725827..3725886, 3727456..3727590,3731083..3731338,3732817..3736588, 3748047..3748232,3750154..3750240,3752483..3752535, 3752625..3752812,3757491..>3757634) /locus_tag="PAL_GLEAN10014337" /product="A-kinase anchor protein SPHKAP" CDS join(3671623..3671898,3689920..3690033,3725827..3725886, 3727456..3727590,3731083..3731338,3732817..3736588, 3748047..3748232,3750154..3750240,3752483..3752535, 3752625..3752812,3757491..3757634) /locus_tag="PAL_GLEAN10014337" /codon_start=1 /product="A-kinase anchor protein SPHKAP" /protein_id="ELK17136.1" /db_xref="InterPro:IPR018292" /db_xref="UniProtKB/Swiss-Prot:Q2M3C7" /translation="MTKVTPTRKCQCQQVELQRPTQSEKLIFDQLYRVSSLLNMEMTH WNVFSFVFWGTNSIAESPLMCEVSTPEQGGASGSSGSSLGSSVTACKKVLRSNSLLES TDYWLQNQRTPCQIGFVEDKSENPICASVCFVNLDVNKDECSTEHLQQRLVNVSPDLP KLINSMNVQQPKENEIVLLSGLTSGNLQTDFEVSQCPWLPDICLVQCARGNRPNSTNC IIFEINKFLIGLELVQERQLTLEASVSKVEDDTNCSLSSIEDDFLTASEHLEEDSEVE EHMNGYENLNVSAHVMESKKPKETTQEEWNYNKEKSLYTLEDKYVSKYHTSLIKAEGS LEKVAEDTTLQSLDPSAKPSEWKGEAVGNESLATNYYYSENFKGQVEKLQALYIPSNA YFSRMFKKDGPSACGTVTEHGSYLEPGDHEDGTNPLLPIQEGEATTGEYATTLAESVL QDAFLRLSQSRPTPPRESAVGVSAGSAPLPRGCSTEDAMVPRSWNELPRIVVVQSPDG SDAAPEPGISSWPEMKVSVETSGVASGENSQRHPQSALEVALACAATVIGTISSPQAT ERLKMEQESLVSKGPLGGSEPLQTQAPPVPTEHSISEYSFPSALCGLTQVASAVAVCG LSETAEVKYPGQLSGLLSAAESATAVPALCNLVAGGDMELGNEAIAEALLKEAALVLT RPNTYSSMGDLMESVTRRIMDTASQPQSLCSENVLGMELAQALSSVVLKHSIDEVHQK NKIIDSHNGRPSSETLDAVMESINRLLFSVICFTFRKMSHLVQLGECPTILSKDTVGW KETEPGCQPADRAASQAWTKAAEHSSSRPPGNPRSTGLVINDLIDDVHPKQDSKGLAK PGLCQNPTLQSELSCSPRVPGFPTAKTSPKGLYQKGTMGKDTKIPHRRPSHNENECRF SSEGKRTPTVTKHSSWDAEDSFSPNTQEKCSRASPLNNEVQVDLSLLGSDLPLPAQSM LRAKHTDLYCITDFAEELAETIVSMATEIAAICLDNSKGKQPWFCAWKRGNEFLVTPN ISCRSLKRKKDSQASGATVRKHKPPRLSEIKRKTDEHPELKEKLMNRVVDESMNLEDI PDSVSIFANEVAAKIMNLTEFSMVDGVWQAQSFPRNRLHSGDRWNRLKASSCESIAEE DMSVRASVNSLGLMSTLSQPVSRDSSVSKQSSCESITDEFSRFMVNQMENEGRGFELL LDYYAGKNASSILNSAMQQACRKNDHLSVRPSCPSKQSSTESITEEFYRYMLRDAERE SRDSTSSRRSSQDWTAGLLSPSLRSPFCYRQSSMPDSRSLGPRLTVNAPLKANSLDGF AQNSQRDFLSVQPVGSASSSGLCKSDSCLYWRGGTDQITSMLIHETWANSIEALMRKN KIITDDGQAADAAPGDSPSQVDKCAHRLASSRVQSGPILLVQESVEYPRRDSVTENQH PPVLAPSRSASLTNHNGLDSKNETSLCHDGVPPNHRGRSLCSREVPLIQIETDQREEC VGEPEHVLSEGSPLEETEQHLKEEKVPDVVRGEDTAQTVCQNRSDSLDAGAVPEADVS TEDRATDEVPNPPGSSGESTDSWSQLANEEDNPDDTSSFLQLSERSMSNGDSSATSSI GITDPDIYQGSMPSSPMIHELVEEKEILHGQPEHIEEGVSQLPAGAAGDRQGSLLVIN FDLEPGCPDAELRATLQWIAASELGIPTIYFKKSQESRIEKFLDVVRLVHQKSWKVGD IFHAVVQYCKMHEEQKDGTPSLFDWLLELG" assembly_gap 3685325..3685341 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3710100..3710119 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3711486..3711584 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3723233..3723304 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3737039..3737606 /estimated_length=568 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3763298..3763417 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3765581..3765592 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3792197..>3827460) /locus_tag="PAL_GLEAN10014338" mRNA complement(join(<3792197..3792231,3799255..3799369, 3799929..3800031,3800893..3801029,3802755..3802862, 3805647..3805746,3809482..3809604,3811511..3811569, 3812956..3813100,3816571..3816643,3824547..3824560, 3827342..>3827460)) /locus_tag="PAL_GLEAN10014338" /product="WD repeat-containing protein 69" CDS complement(join(3792197..3792231,3799255..3799369, 3799929..3800031,3800893..3801029,3802755..3802862, 3805647..3805746,3809482..3809604,3811511..3811569, 3812956..3813100,3816571..3816643,3824547..3824560, 3827342..3827460)) /locus_tag="PAL_GLEAN10014338" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="WD repeat-containing protein 69" /protein_id="ELK17137.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="InterPro:IPR020472" /db_xref="UniProtKB/Swiss-Prot:Q0P593" /translation="MRSGAPLLFGRFHGYEAGPLGVPERENEAQEPPASLLPTSSFLK RIMLEYEKSGKLKTKSIDLLDLSPSTDVNALVEEIQKAEPLITASRSDQVKLLVQRLQ DKLTQHSSHQFYLFKILRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHT LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNP QSTVVATGSMDTTAKLWDIQNGEEVFTLTVHTTISALLQGHSAEIISLSFNTSGNRII TGSFDHTVTVWDAGTGRKVYILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNG KCMITLTGHNDEILDSCFDYTGKLIATASADGSKDNTCRIWR" assembly_gap 3819024..3819533 /estimated_length=510 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3831331..3831355 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3839034..3839068 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3844888..3844942 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3850878..3850997 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3860118..>3862923) /locus_tag="PAL_GLEAN10014339" mRNA complement(join(<3860118..3860139,3861605..3861719, 3862845..>3862923)) /locus_tag="PAL_GLEAN10014339" /product="C-C motif chemokine 20" CDS complement(join(3860118..3860139,3861605..3861719, 3862845..3862923)) /locus_tag="PAL_GLEAN10014339" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008009 - chemokine activity [Evidence IEA]; GO_process: GO:0006955 - immune response [Evidence IEA]" /codon_start=1 /product="C-C motif chemokine 20" /protein_id="ELK17138.1" /db_xref="InterPro:IPR001811" /db_xref="UniProtKB/Swiss-Prot:P78556" /translation="MMSSSKTLLLAALMSVLLLHLCSKSEAASSFDCCLGYTEHAIHP RFLLGFTQQLASEACDINAVIQRIKKM" assembly_gap 3866675..3866762 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3874446..3874476 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3886723..3886815 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3894846..3895431 /estimated_length=586 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3902669..3902817 /estimated_length=149 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3908088..3908105 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3909886..3910080 /estimated_length=195 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3916985..3917598 /estimated_length=614 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3919146..>3939855 /locus_tag="PAL_GLEAN10014340" mRNA join(<3919146..3919978,3920920..3920975,3921498..3921690, 3923381..3923522,3939595..>3939855) /locus_tag="PAL_GLEAN10014340" /product="Thiamine transporter 2" CDS join(3919146..3919978,3920920..3920975,3921498..3921690, 3923381..3923522,3939595..3939855) /locus_tag="PAL_GLEAN10014340" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005542 - folic acid binding [Evidence IEA]; GO_function: GO:0008518 - reduced folate carrier activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Thiamine transporter 2" /protein_id="ELK17139.1" /db_xref="InterPro:IPR002666" /db_xref="InterPro:IPR016196" /db_xref="UniProtKB/Swiss-Prot:Q4R877" /translation="MTNEIFPVWTYSYLVLLLPVFILTDYVRYKPVLILQGISFIITW LLLLFGQGVKAMQVVEFFYGIVTATEVAYYAYIYSVVSPEHYQKVSGYCRGITLVART MASVLAQLLVSLAKISEFYLNVISLVSVSMAFLFSLCLPMPKKSMFFHAKPSKEVQKP SSTDAVIEEPHEGRTSGCDEEKPTSETLTTLEKLDDGQWSGPKPENVALRVFMQWFQD LKECYSSKRLFYWSLWWALSTAGYNQILNYVQVLWEYKAPSQNSFVYNGAVEAIATFG GKSDPDDIKAETGVEMKISKGAVAAFAVGYVKVNWDLLGEMALAIFSVVNAGSLFLMH YTTDIWACYAGYLIFKSGYMLLITIAVFQIAVNLSVERYALVFGINTFIALVIQTLIT IIVVDQRGLNLPISIQLTNDTFPVWTYSYLVLLLPVFILTDYVCYEPVIVLEAISFII TSLLLLFGQGVRTTQVVEFFYGLAFVTEVAYSAYLYSVVSPEHY" assembly_gap 3920300..3920348 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3939901..>3980381 /locus_tag="PAL_GLEAN10014341" mRNA join(<3939901..3940423,3944178..3944232,3949668..3949815, 3957148..3957268,3979807..>3980381) /locus_tag="PAL_GLEAN10014341" /product="Thiamine transporter 2" CDS join(3939901..3940423,3944178..3944232,3949668..3949815, 3957148..3957268,3979807..3980381) /locus_tag="PAL_GLEAN10014341" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005542 - folic acid binding [Evidence IEA]; GO_function: GO:0008518 - reduced folate carrier activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Thiamine transporter 2" /protein_id="ELK17140.1" /db_xref="InterPro:IPR002666" /db_xref="UniProtKB/Swiss-Prot:Q9BZV2" /translation="MASVLAQLLVSLAKISYFYLNVISLVSVSMAFLFSLCLPMPKKS MFFHAKPSKEVQKPSSTEAVIEEPHEGRTSGCDEEKPTSETLTTLGKLDDGQWSGPKP ENVALRVFMQWFQDLKECYSSKRLFYWSLWWALSTAGYNQVLSNVQTLWEYKAPSQSS PIDNGAVEALATFGGALAAFTVVHVKVNWDLLGVRFQIAIDLSVERYALVFGINTFVA SVIQTVMMVTVVDKRGLGLPVDILFLVYGSYFSVIAEIFLMRSIYIIYSARCRKKKRS FSGDNLKTGQNNNKEVTKYHVPGPRMEYLRAAWQTRASDLPHLLNIHLTSLKSSLLTP WGAVAVVAVVVAVAVAVVAAVAAVVAAVVAAVAAVVAAVAVAAAPPADATGSAAAPTA APAAVAAVAAAAVSPWSAAAAAPVAVAPVAVVPVAVGRAVGRAVASRSAVASRNAVAR SSAAARWPAEAPVEFAGIALERG" assembly_gap 3947606..3947707 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3954049..3954122 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3965964..3966033 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3966300..3966849 /estimated_length=550 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3967408..3967473 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4001769..>4069917) /locus_tag="PAL_GLEAN10014342" mRNA complement(join(<4001769..4001828,4002399..4002490, 4003468..4003626,4011518..4011610,4012393..4012472, 4014849..4015029,4016053..4016262,4018330..4018449, 4022438..4022591,4023815..4023977,4027672..4027787, 4050546..4050639,4069823..>4069917)) /locus_tag="PAL_GLEAN10014342" /product="Arf-GAP domain and FG repeat-containing protein 1" CDS complement(join(4001769..4001828,4002399..4002490, 4003468..4003626,4011518..4011610,4012393..4012472, 4014849..4015029,4016053..4016262,4018330..4018449, 4022438..4022591,4023815..4023977,4027672..4027787, 4050546..4050639,4069823..4069917)) /locus_tag="PAL_GLEAN10014342" /note="GO_function: GO:0008060 - ARF GTPase activator activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0032312 - regulation of ARF GTPase activity [Evidence IEA]" /codon_start=1 /product="Arf-GAP domain and FG repeat-containing protein 1" /protein_id="ELK17141.1" /db_xref="InterPro:IPR001164" /db_xref="UniProtKB/Swiss-Prot:P52594" /translation="MPESHLHFERPLLAAVLTTLKVISALQIQQAERGLNPPHRVKSI SMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRW YVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPALHLNKGTPSQSPVV GRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTVTANFANFAHFNSHAAQNSANADFAN FDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAGSVNANFAHFDNFPKSSSADFGTFN TSQTHQTASTVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVG SVVSVPSQPSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVGASAQT QPAPSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPAGF GTPAPYSLPTSFSGSFQQPAFPAQAAFPQQPAFPQQPNGAGFAAFGQTKPVVTPFGQV AAAGVSSNPFMSGAPTGQFPAGSSSTNPFL" assembly_gap 4066040..4066739 /estimated_length=700 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4077325..4077393 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4079214..4080480 /estimated_length=1267 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4090937..4090967 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4144871..>4171832) /locus_tag="PAL_GLEAN10014344" mRNA complement(join(<4144871..4145002,4147496..4147580, 4155765..4155923,4162675..4162763,4166127..4166296, 4167165..4167385,4171774..>4171832)) /locus_tag="PAL_GLEAN10014344" /product="Mitochondrial fission factor" CDS complement(join(4144871..4145002,4147496..4147580, 4155765..4155923,4162675..4162763,4166127..4166296, 4167165..4167385,4171774..4171832)) /locus_tag="PAL_GLEAN10014344" /codon_start=1 /product="Mitochondrial fission factor" /protein_id="ELK17142.1" /db_xref="InterPro:IPR008518" /db_xref="UniProtKB/Swiss-Prot:Q9GZY8" /translation="MPGDAPWISCQGLDAGGELEVSGTAFPSPSAAEMAEISRIQYEM EYTEGISQRMRVPEKLKVAPPNADLEQEFQEGVPNASVIMQVPERIVVAGNNEDIPFS RPADLDIIQSTSFKPLALKTPPRVLTLSERPLDFLDLERPPPTPQNEEVRAVGRLKRE RSMSENAVRQNGQLVRTDSLVTPSPQQVRVCPPHMLPEDGANLSSARGILSLIQSSTR RAYQQILDVLDENRRYGISNTDTTIEGTSDDMTVVDAASLRRQIIKLNRRLQLLEEEN KERAKREMVMYSITVAFWLLNSWLWFRR" assembly_gap 4160357..4160368 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4167651..4167705 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4185491..4186297 /estimated_length=807 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4196573..4197951 /estimated_length=1379 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4201791..4203058 /estimated_length=1268 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4223123..4223173 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4252936..4252974 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4282312..4282467 /estimated_length=156 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4292521..4292583 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4313469..4313662 /estimated_length=194 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4326742..4326757 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4330198..4330387 /estimated_length=190 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4338159..4338223 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4356243..4356321 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4374699..4374744 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4380705..4380792 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4403909..4403938 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4414123..4414134 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4422454..4422471 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4424723..>4425205) /locus_tag="PAL_GLEAN10014347" mRNA complement(join(<4424723..4424911,4425131..>4425205)) /locus_tag="PAL_GLEAN10014347" /product="hypothetical protein" CDS complement(join(4424723..4424911,4425131..4425205)) /locus_tag="PAL_GLEAN10014347" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17143.1" /translation="MNTAPITQFLLTRGSRNGKCRYIRQNNPVKQVVSSPSTNGTPGL MQTPCPEAWCRAHPPPHHRVQGPLLQPLTPILSTLFPSAVHAM" gene complement(<4431280..>4485300) /locus_tag="PAL_GLEAN10014348" mRNA complement(join(<4431280..4431374,4473921..4474043, 4481638..4481694,4484660..4484748,4485125..>4485300)) /locus_tag="PAL_GLEAN10014348" /product="Rhomboid domain-containing protein 1" CDS complement(join(4431280..4431374,4473921..4474043, 4481638..4481694,4484660..4484748,4485125..4485300)) /locus_tag="PAL_GLEAN10014348" /codon_start=1 /product="Rhomboid domain-containing protein 1" /protein_id="ELK17144.1" /db_xref="InterPro:IPR003903" /db_xref="UniProtKB/Swiss-Prot:Q5RBS4" /translation="MKDTCADDFAGSPFAGKCVAITVPSAVSLAVRFAGQWGVNMQLS ALLRAQIDTILTRDRASFAGHLSGILVGLMYTHGPLKNIMEACAGMFPSDIHQPRQQY YFNNSGYGGFQDHPREEEHRSYAAYTAGLSEEEQLERAVRASLRDQGRSRNSPPPYGF RLSSEEEMRRKRLHRFDFQ" assembly_gap 4453906..4453944 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4463213..4463253 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4501646..4501726 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4510588..4510612 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4515514..>4517334) /locus_tag="PAL_GLEAN10014350" mRNA complement(join(<4515514..4515650,4516902..>4517334)) /locus_tag="PAL_GLEAN10014350" /product="Rhomboid domain-containing protein 1" CDS complement(join(4515514..4515650,4516902..4517334)) /locus_tag="PAL_GLEAN10014350" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]" /codon_start=1 /product="Rhomboid domain-containing protein 1" /protein_id="ELK17145.1" /db_xref="InterPro:IPR022764" /db_xref="UniProtKB/Swiss-Prot:Q8TEB9" /translation="MQRRTRGLNTGLLLLLSQICYVGVNNIPPVTLAALALNTWFFLS PLKPLYGSCLSVEKCFQQKDWQRLLLSPFHHADDWHLYFNMVSLLWKGINLERRLGSK WFAYVIATFSLLTGVVYLFLELAFAEFMDEPSFRMNCAVGFSGVLFALKVLNNHYFPG GFVSVMGFPVPNKFACWAELVAIHLMVPG" assembly_gap 4530562..4531097 /estimated_length=536 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4537981..4538033 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4551139..4551163 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4569566..4569870 /estimated_length=305 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4570688..4570851 /estimated_length=164 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4571019..>4574735 /locus_tag="PAL_GLEAN10014351" mRNA <4571019..>4574735 /locus_tag="PAL_GLEAN10014351" /product="Insulin receptor substrate 1" CDS 4571019..4574735 /locus_tag="PAL_GLEAN10014351" /note="GO_function: GO:0005158 - insulin receptor binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Insulin receptor substrate 1" /protein_id="ELK17146.1" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR002404" /db_xref="UniProtKB/Swiss-Prot:P35568" /translation="MASPPETDGFSDVRKVGYLRKPKSMHKRFFVLRAASEAGGPARL EYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVALYTRDEHFAIAADSEAE QDSWYQALLQLHNRAKGHHDGASALGAGGGGSSCSGSSGLGEAGEDLSYGDGPPGPAF KEVWQVILKPKGLGQTKNLIGIYRLCLTSKTISFVKLNSEAAAVVLQLMNIRRCGHSE NFFFIEVGRSAVTGPGEFWMQVDDSVVAQNMHETILEAMRAMSDEFRPRSKSQSSSNC SNPITVPLRRHHLNNPPPSQVGLTRRSRTESITATSPASMVGGKQGSFRVRASSDGEG TMSRPASVDGSPVSPSTNRTHAHRHRGSSRLHPPLNHSRSIPMPSSRCSPSATSPVSL SSSSTSGHGSTSDCLFPRRSSASVSGSPSDGGFISSDEYGSSPCDFRSSFRSVTPDSL GHTPPARGEEELSNYICMGGKGASTLTAPNGHYILPRGGNGHRYIPGAGLGMSPALAG DEAASAADLDNRFRKRTHSAGTSPTISHQKTPSQSSVASIEEYTEMMPAYPPGGGSGG RLPGYRHSAFVPTQSYPEEGLEGHPLERRGGHNRPDTSTLHTDDGYMPMSPGVAPVPS SRKGSGDYMPMSPKSVSAPQQIVRRHPQRVDPNGYMMMSPSGSCSPDIGGGPSSSSSS SAAPSGSSYGKPWTNGVGGHHSHAPPHPKLPAESSGSKLLSCTGDYMNMSPVGDSNTS SPSDCYYGPEDPQHKPVLSYYSLPRSFKHTQRPGELEETARHQHLRLSSSSGRLLYAA AAEDSSSSTSSDSLGGGHCGARPEPGLPHHLHHQVLQSHLPRKVDTAAQTNSRLARPT RLSLGDPKASTLPRAREQQQRPALLHPPEPKSPGEYVNIEFGCDQPGYLCGPVASHSS PSIRCPSQLQPAPKEEETGTEEYMNMDLGPGRRATWQESPGVQPGRVGPAPPGTANMS RPTRAVPSGRGDYMTVQVGRPRQSYVDTSPVAPVSYADIRTGIVEEARLPGAPAAAPS SSSAAPASPTVPQGAGEPEARSSLLGGPQGPGGMSAFTRVNLSPSCNQSAKVIRADPQ ACRRRHSSETFSSTPNATRAGNTVPFGGGAAVGGTGGGSGSSTEDVKRHSSASFENVW LRPGELGGAPKEPAQVCGTAGGLENGLNYIDLDLVKDVKQRPQERPPQSQPPAPPPQH QPMGSSESSSTNRSSEDVSAYASISFQKQPEDLQ" assembly_gap 4577743..4577820 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4585751..4585786 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4606744..4606782 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4615376..4615421 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4647116..4647160 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4665542..4665579 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4671922..4675698 /estimated_length=3777 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4676931..4676968 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4681069..4681096 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4744143..4744387 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4764298..4764367 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4781911..4781958 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4803742..4803781 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4811379..4811423 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4841692..4841713 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4879691..4879707 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4884003..4884232 /estimated_length=230 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4911191..4911234 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5035975..5035986 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5059682..5059710 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5068105..5068126 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5069782..5070296 /estimated_length=515 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5080444..5080474 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5114096..5114141 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5121781..5121804 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5131161..5131175 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5138496..5138515 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5142389..5143798 /estimated_length=1410 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5145085..5145103 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5154746..5154763 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5247108..5247143 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5289706..5289753 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5313857..5313935 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5324561..5324594 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5355953..>5577125) /locus_tag="PAL_GLEAN10014352" mRNA complement(join(<5355953..5356180,5394041..5394144, 5417840..5418046,5448324..5449418,5487624..5487925, 5576920..>5577125)) /locus_tag="PAL_GLEAN10014352" /product="hypothetical protein" CDS complement(join(5355953..5356180,5394041..5394144, 5417840..5418046,5448324..5449418,5487624..5487925, 5576920..5577125)) /locus_tag="PAL_GLEAN10014352" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17147.1" /db_xref="UniProtKB/Swiss-Prot:Q9P242" /translation="MMSSNPEKDPLDTFLQYIEDLGMKAYDGLVIQNASDIARENDRL RNETNLAYLKEKNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLP HPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVNSTATSK SGKAPERTEVSTKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLT RDSSLSQASSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQ DSKCDLDHHSCSSQCATPTVPDLDFAKSSVPCTPKGLLCDIPPPFPNLLSHRPPLLVF PPAPVQCSPNSDESPLTPLEVTKLPVLENVSYMKQQAGASPSSLPSHSSGHPKLEKDQ SGALGPAPATSVLSSSPPPPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPP PYDAVHSGSLSRSSPSVPHSTTRPVSQDGGKMVNASVNTYGSAPSGSRSRTPTSPLEE LTSLFTSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDSKERGHHGASSR EPVKAQEWDGTPGPPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPS VTPLRQASDLQQSQVACMPWFHGDHTMLEMIEKKRCLCKEIKARQKTEKGLCKQDSMP ILPSWKKNAGAKKYSPPPYSKQQTVFWDTAI" assembly_gap 5367771..5367886 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5379136..5379264 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5382045..5382095 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5397635..5397750 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5398143..5398229 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5447893..5447942 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5620978..5621000 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5647541..5647565 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5665597..5665637 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5677069..5677095 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5696558..5696679 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5749893..5749945 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5764439..5764450 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5802934..5802976 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5813410..5814065 /estimated_length=656 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5856518..5856639 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5868476..>6037981 /locus_tag="PAL_GLEAN10014354" mRNA join(<5868476..5868637,5878476..5878562,5915591..5915710, 5926206..5926295,5942605..5942687,5949329..5949401, 5949678..5949800,5950057..5950191,5959013..5959196, 5960493..5960578,5960853..5960936,5961058..5961213, 5966118..5966339,5966553..5966675,5967770..5967852, 5972684..5972806,5974504..5974583,5976315..5976502, 5977001..5977066,5978797..5978889,5982769..5982892, 5983072..5983193,5983562..5983648,5986199..5986291, 5986730..5986848,5988758..5988827,5992182..5992295, 5992842..5992913,5994320..5994466,5997076..5997159, 5999506..5999602,6001144..6001188,6002732..6002907, 6003033..6003149,6004314..6004425,6005144..6005265, 6005355..6005469,6005552..6005618,6005844..6005891, 6006409..6006510,6008537..6008661,6009955..6010067, 6011671..6011808,6012467..6012649,6013182..6013292, 6014275..6014490,6015978..6016035,6016359..6016457, 6019085..6019191,6020193..6020315,6020454..6020567, 6027819..6027965,6030132..6030342,6031575..6031765, 6033651..6033751,6033928..6034066,6037865..>6037981) /locus_tag="PAL_GLEAN10014354" /product="Dedicator of cytokinesis protein 10" CDS join(5868476..5868637,5878476..5878562,5915591..5915710, 5926206..5926295,5942605..5942687,5949329..5949401, 5949678..5949800,5950057..5950191,5959013..5959196, 5960493..5960578,5960853..5960936,5961058..5961213, 5966118..5966339,5966553..5966675,5967770..5967852, 5972684..5972806,5974504..5974583,5976315..5976502, 5977001..5977066,5978797..5978889,5982769..5982892, 5983072..5983193,5983562..5983648,5986199..5986291, 5986730..5986848,5988758..5988827,5992182..5992295, 5992842..5992913,5994320..5994466,5997076..5997159, 5999506..5999602,6001144..6001188,6002732..6002907, 6003033..6003149,6004314..6004425,6005144..6005265, 6005355..6005469,6005552..6005618,6005844..6005891, 6006409..6006510,6008537..6008661,6009955..6010067, 6011671..6011808,6012467..6012649,6013182..6013292, 6014275..6014490,6015978..6016035,6016359..6016457, 6019085..6019191,6020193..6020315,6020454..6020567, 6027819..6027965,6030132..6030342,6031575..6031765, 6033651..6033751,6033928..6034066,6037865..6037981) /locus_tag="PAL_GLEAN10014354" /note="GO_function: GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_function: GO:0051020 - GTPase binding [Evidence IEA]" /codon_start=1 /product="Dedicator of cytokinesis protein 10" /protein_id="ELK17148.1" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR010703" /db_xref="InterPro:IPR021816" /db_xref="UniProtKB/Swiss-Prot:Q96BY6" /translation="MGCTASIVLLQAFRSVVQRSCPHICSRRQEEPSHEILPLESDDE MSRPRTLIIMDSIQRERVAVHLQSEPIRSDAVDTQNKLRQEKPRLLEPLDYETVIEEL EKTYQNDPLQDLLFFPSDDFSTATVPWDIRTLYSTVPEDAERKAENLLVKEACKFYSS QWYVVNYKYEQYSGDIRQLPRAEYKPEKLPSHSFEVDHEDADKDEDTTSHSSSKGGGG AGGTGVFKSGWLYKGNFNSTVNNTITVRSFKKRYFQLTQLPDNSYIMNFYKDEKISKE PKGCIFLDSCTGVVQNNRLRKYAFELKMNDLTYFVLAAETECDMEEWIHTLNRILQIS PEGPLQGRRSAELTDLGLDSLDNSITCECAPEETDSSENSLHPDFAKYLTETEETVKA TRNMERLNLFSMDPDIDTLKLQKKDLLESESVIKPFEEKAAKRIMIICKALTFSLQGC VTENENDPITNIEPFFVSVALYDLRNSRKISADFHVDLNHTAVRQMLSGAPVALENGN SDTVTPRQSEEPHVKGFPEEWLKFPKQAIFSVSNPHSEIVLVAKIEKVLMGNIASGAE PYIKNPDSNKYAQKILKSNRQFCSKLGKYRMPFAWAMRSVFKDNQGNVDRDSRFSPLY RHESSKISTEDLLKLVSDYRRADRISKMQTIPGSLDITVENIPLEHPNCVTSSFIPVK PFNVTAQPEPTVEVEEFVYDSTKYCRPYRVYKNQIYIYPKHLKYDSQKCFNKARNITV CIEFKNSDDEGAKPMKCIYGKPGGPLFTSAAYTAVLHHSQNPDFSDEVKIELPTQLHE KHHILFSFYHVTCDINAKANAKKKEVLETSVGYAWLPLMKHDQIASQEYNIPIATSLP PNYLSFQDSASGKHGGSDIKWVDGGKPLFKVSTFVVSTVNTQDPYVNAFFRQCQKREK DMSQSPTSNFIRSCKNLLNVEKIHAIMSFLPIILNQLFKVLVQNEEDEISTTVTRVLT DIVAKCHEEQLDHSVQSYIKFVFKTKACKERTIHEELTKSVTGLLKSNDSTTVRHVLK HSWFFFAIILKSMAQHLIDTNKIQLSRAQRFPESYQNELDNLVMVLSDHVIWKYKDAL EETKRANHSVARFLKRCFTFMDRGFVFKMVNNYISMFSSGELKTLCQYKFDFLQEVCQ HEHFIPLCLPIRSANIPDPLTPSESTQELHASDMPEYSVTNEFCRKHFLIGILLREVG FALQEDQDIRHLALAVLKNLMAKHSFDDRYREPRKQAQIASLYMPLYGMLLDNMPRIY LKDLYPFTINTSNQGSRDDLSTNGGFHSQSAMKHANSVDTSFSKDVLNSIAAFSSIAI STVNHADSRASLASLDSNPSTNEKSSEKTDNCEKIPRPLSLIGSTLRFDKLDQAETRS LLMCFLQIMKTISEETLIAYWQRAPSPEVSDFFSILDVCLQNFRYLGKRNIIRKIAAA FKFVQSTQNNGTLKGSNPSCQTSGLLTQWMNTSSGHEGHKQHRSQTLPIIRGKNALSN PKLLQMLDNTMTSNSNEIDIVHHVDTEANVATEVCLTILDLLSLFTQIHHRQLQQSEC QNSLMKRVFDTYMLFFQVNQSATALKHVFASLRLFVCKFPAAFFQGPADLCGSFCYEV LKCCNHRSRSTQTEASALLYFFMRKNFEFNKQKSIVRSHLQLIKAVSQLIADAGIGGS RFQHSLAITNNFANGDKQMKNSNFPAEVKDLTKRIRTVLMATAQMKEHEKDPEMLVDL QYSLANSYASTPELRRTWLESMAKIHARNGDLSEAAMCYIHIAALIAEYLKRKGYWKM EKICTPSLLLEDIHPCDSNPLLTTPSGGSMFSMGWPAFLSITPNIKEEGAMKEDSGMQ DTPYNENILVEQLYMCVEFLWKSERYELIADVNKPIIAVFEKQRDFKKLSDLYYDIHR SYLKVAEVVNSEKRLFGRYYRVAFYGQGFFEEEEGKEYIYKEPKLTGLSEISQRLLKL YADKFGADNVKIIQDSNKVNPKDLDPKYAYIQVTYVTPFFEEKEIEDRKTDFEMHHNI KRFVFETPFTLSGKKHGGVEEQCKRRTVLTTSHLFPYVKKRIQVISQSSTELNPIEVA IDEMSKKVSELNQLCTMEEVDMIRLQLKLQGSVSVKVNAGPMAYARAFLEETNAKKYP DNQVKLLKEIFRQFADACGQALDVNERLIKEDQLEYQEELRSHYKDMLGELSAIMNEQ ITCRDDLAKRGLERTFTRVTSKATAAPPTVSISPCVEI" assembly_gap 5872171..5872558 /estimated_length=388 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5900311..5900483 /estimated_length=173 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5903849..5903889 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5921141..5922130 /estimated_length=990 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6014687..6014733 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6043933..6046273 /estimated_length=2341 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6083042..6084047 /estimated_length=1006 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6085135..6085220 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6097980..6098031 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6102928..6103255 /estimated_length=328 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6167870..>6246366 /locus_tag="PAL_GLEAN10014356" mRNA join(<6167870..6168067,6186891..6187004,6213504..6213664, 6214640..6214754,6216640..6216868,6220717..6220862, 6221599..6221775,6222998..6223168,6223750..6223857, 6225871..6225995,6226637..6226733,6228149..6228293, 6236494..6236661,6243386..6243531,6246235..>6246366) /locus_tag="PAL_GLEAN10014356" /product="Cullin-3" CDS join(6167870..6168067,6186891..6187004,6213504..6213664, 6214640..6214754,6216640..6216868,6220717..6220862, 6221599..6221775,6222998..6223168,6223750..6223857, 6225871..6225995,6226637..6226733,6228149..6228293, 6236494..6236661,6243386..6243531,6246235..6246366) /locus_tag="PAL_GLEAN10014356" /note="GO_component: GO:0031461 - cullin-RING ubiquitin ligase complex [Evidence IEA]; GO_function: GO:0031625 - ubiquitin protein ligase binding [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]" /codon_start=1 /product="Cullin-3" /protein_id="ELK17149.1" /db_xref="InterPro:IPR001373" /db_xref="InterPro:IPR016158" /db_xref="InterPro:IPR016159" /db_xref="InterPro:IPR019559" /db_xref="UniProtKB/Swiss-Prot:Q9JLV5" /translation="MTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVL HKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILM YMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA IRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEAR INEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLAC MYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFL QESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDK AMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEG MFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRH AFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTR KHILQVSTFQMTILMLFNNREKYTFEVCINIPERELVRALQSLACGKPTQRVLTKEPK SKEIENGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAI VRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYT YVA" assembly_gap 6197761..6207238 /estimated_length=9478 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6210348..6210380 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6231305..6232845 /estimated_length=1541 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6257748..6257907 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6262266..6262945 /estimated_length=680 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6266157..6266371 /estimated_length=215 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6280262..6280526 /estimated_length=265 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6405238..6405270 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6423953..6423991 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6426271..6426305 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6457445..6457493 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6476331..6476372 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6485469..6485506 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6504335..6504932 /estimated_length=598 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6511082..6511885 /estimated_length=804 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6522836..6522848 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6543225..>6566552 /locus_tag="PAL_GLEAN10014359" mRNA join(<6543225..6543498,6546276..6546503,6551418..6551615, 6559016..6559214,6561122..6561222,6563069..6563155, 6565547..6565630,6566515..>6566552) /locus_tag="PAL_GLEAN10014359" /product="Glia-derived nexin" CDS join(6543225..6543498,6546276..6546503,6551418..6551615, 6559016..6559214,6561122..6561222,6563069..6563155, 6565547..6565630,6566515..6566552) /locus_tag="PAL_GLEAN10014359" /note="GO_function: GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]" /codon_start=1 /product="Glia-derived nexin" /protein_id="ELK17150.1" /db_xref="InterPro:IPR000215" /db_xref="UniProtKB/Swiss-Prot:P07093" /translation="MPEGTMSWHFPCFLLATVTLPSACLQFNPRPLEELGSDIGIQVF NQIVKSRPRDNIIVSPHGIASALGMLQLGASGRTKLQLAMMMKYNVNGLGKMLKRINK AIVSKKNKDVVTVANAMFVEKASKLEAPFVARNKDVFQCKVWNLNFESPASACDSINA WVKNETRGMIDNLLSPDLIDGVLTKMVLVNALYFKGLWKSRFRPENTKKRTFVAADGK SYQVPMLAQLSLFQSGSTSTPSGLWYNFIELPYHGDSISMLIALPSESSTPLSAIIPH ISTKTIDSWKSMMVPKRVQVILPKFTAVTQTDLKEPLKALGIIDMFDPLKANFAKISR SENLHVSQILQKAKIEVSEDGTRASAVTAAILIARSSPPWFIVDRPFLFFIRHNPTGA FLFMGQINKP" assembly_gap 6563588..6563627 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6574492..>6580714) /locus_tag="PAL_GLEAN10014360" mRNA complement(join(<6574492..6574663,6575470..6575648, 6577463..6577931,6580533..>6580714)) /locus_tag="PAL_GLEAN10014360" /product="39S ribosomal protein L44, mitochondrial" CDS complement(join(6574492..6574663,6575470..6575648, 6577463..6577931,6580533..6580714)) /locus_tag="PAL_GLEAN10014360" /note="GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0004525 - ribonuclease III activity [Evidence IEA]; GO_process: GO:0006396 - RNA processing [Evidence IEA]" /codon_start=1 /product="39S ribosomal protein L44, mitochondrial" /protein_id="ELK17151.1" /db_xref="InterPro:IPR000999" /db_xref="UniProtKB/Swiss-Prot:Q2KIS2" /translation="MASGLVRLLLLRGPRCLLAPVVLTSAPPVRGVKKGFRAAFRFQK ELERWRLLRSPPPPVRRSEKPNWDYHAEIQAFGHRLQENFSLELLKTAFVNSCYIKSE EAKRQKLGIEKEAVLLNLKDNQELSDQGSSFSQACLTQFLEDAYPDLPTEGVRSLVDF LSGEEVVCHVARNLAVEQLTLSAEFPVPPAVLQQTFFAAIGALLQSSGPERTALFIRD FLITQMTGKELFEIWKIANPMGLLVEELKKRNISAPESRLTRQSGSTTALAVYFVGLY CEKKLIAEGPGETVLVAEEEAARVALRKLYGLTENRRPWDYSKPKENLRSEKTIAAS" assembly_gap 6575661..6575738 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6584434..6584718 /estimated_length=285 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6591670..6591687 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6622575..6622600 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6633426..6634912 /estimated_length=1487 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6645816..6646150 /estimated_length=335 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6653400..6653443 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6655350..6655502 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6660288..>6700600 /locus_tag="PAL_GLEAN10014362" mRNA join(<6660288..6660350,6686017..6686195,6687938..6688046, 6695679..6695816,6700565..>6700600) /locus_tag="PAL_GLEAN10014362" /product="AP-1 complex subunit sigma-3" CDS join(6660288..6660350,6686017..6686195,6687938..6688046, 6695679..6695816,6700565..6700600) /locus_tag="PAL_GLEAN10014362" /note="GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="AP-1 complex subunit sigma-3" /protein_id="ELK17152.1" /db_xref="InterPro:IPR011012" /db_xref="InterPro:IPR022775" /db_xref="UniProtKB/Swiss-Prot:Q7TN05" /translation="MNLTDDKIHSGSIVLYGMQNKIHFILLFSRQGKLRLQKWYTTLP DKERKRITREIIQIVLSRGHRTSSFIDWKELKLVYKRYASLYFCCAIENQDNELLTLE TVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKLAVKAIEDSDM LQETLEEYMNKPTF" assembly_gap 6668324..6668351 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6701709..6701729 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6706292..6706321 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6747493..6747519 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6794759..6794787 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6795286..>6797142 /locus_tag="PAL_GLEAN10014363" mRNA <6795286..>6797142 /locus_tag="PAL_GLEAN10014363" /product="Secretogranin-2" CDS 6795286..6797142 /locus_tag="PAL_GLEAN10014363" /note="GO_component: GO:0005615 - extracellular space [Evidence IEA]" /codon_start=1 /product="Secretogranin-2" /protein_id="ELK17153.1" /db_xref="InterPro:IPR001990" /db_xref="UniProtKB/Swiss-Prot:P13521" /translation="MAEAKSHQLGAALFLIPLIFLIFGAEAASFHRNQLLQKEPDLRL ENVQRFPSPEMIRALEYIEKLRQQARKEESSPDYNSYQGVSVPLQQKENGDESHLPES SRDSLSEDEWMRIILEALRQAENEPQSALKENKAYALNSENFPIDMPADYETQQWPER KLKHMRFPPMYEENSRDNPFKRTNEIVEEQYTPQSLATLESVFQELGKLTGSNNQKRE RVDEEQKLYTDDEDDIYKANNIAYEDVVGGEDWNPVEEKIESQTQEEVRDSKENTEKN EQINDEMKRSGQLGLQDEDLRKESKDQLSDDVSKVIAYLKRLVNAAGSGRSQNGQNGE RATRLFEKPLDSQSIYQLIEISRNLQIPPEDLIDMLKTGEKPNGSVEPEQELELPIDL DDISEVDLDHPGMFQNKMLSKNGYPKTPVRAVIEALPDGLSVEDVLNLLGMESDANQK LPYFPGQYNREKVLPRLPYGPGRSKANQLSKGTWMPDVENRQMAYENLNDKDQDLGEY LARMLVKYPEIINSNQMKRVLGPVSSEDDLQEENQIEQAIKEHLNQGSSPETDKLASV SKRLPVGAPKNDDTPNRQYLDEDLLMKVLEYLNQEKAEKGREHIAKRAMENM" assembly_gap 6800315..6800338 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6800825..6800874 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6849248..6849303 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6859997..6862253 /estimated_length=2257 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6925875..6925941 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6935828..6935862 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6973232..6973252 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6985992..6986002 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7035055..7035119 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7057265..7057809 /estimated_length=545 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7059928..7059937 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7065465..7065500 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7074345..7074361 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7085420..7085435 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7086204..7086218 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7107886..7107930 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7134302..7134345 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7141443..>7141952) /locus_tag="PAL_GLEAN10014364" mRNA complement(<7141443..>7141952) /locus_tag="PAL_GLEAN10014364" /product="Potassium voltage-gated channel subfamily E member 4" CDS complement(7141443..7141952) /locus_tag="PAL_GLEAN10014364" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]" /codon_start=1 /product="Potassium voltage-gated channel subfamily E member 4" /protein_id="ELK17154.1" /db_xref="InterPro:IPR000369" /db_xref="UniProtKB/Swiss-Prot:Q9WTW3" /translation="MLKMDPLNSTHPSTEAPGSPLQSHAPSSGGNGNEYFYILVVMSF YGIFLIGIMLGYMKSKRREKKSSLLLLYKDEERLWGEAMKPLPVVSGLRSVQVPMMFN MLQESMAPALSCTLCSMEGDSVSSESSSPDVHLTIQEEGADDELGETSETPLNESSEG SSENIHQNS" assembly_gap 7144607..7145726 /estimated_length=1120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7169806..7169833 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7177746..7177777 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7192125..7192139 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7197384..7198200 /estimated_length=817 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7200171..7200205 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7211866..>7266073) /locus_tag="PAL_GLEAN10014365" mRNA complement(join(<7211866..7212023,7216219..7216376, 7217727..7217841,7219173..7219364,7220210..7220284, 7221909..7222081,7223336..7223466,7224747..7224818, 7225072..7225195,7226390..7226576,7236179..7236436, 7238268..7238406,7247820..7247929,7249188..7249365, 7265972..>7266073)) /locus_tag="PAL_GLEAN10014365" /product="Long-chain-fatty-acid--CoA ligase 3" CDS complement(join(7211866..7212023,7216219..7216376, 7217727..7217841,7219173..7219364,7220210..7220284, 7221909..7222081,7223336..7223466,7224747..7224818, 7225072..7225195,7226390..7226576,7236179..7236436, 7238268..7238406,7247820..7247929,7249188..7249365, 7265972..7266073)) /locus_tag="PAL_GLEAN10014365" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Long-chain-fatty-acid--CoA ligase 3" /protein_id="ELK17155.1" /db_xref="InterPro:IPR000873" /db_xref="UniProtKB/Swiss-Prot:O95573" /translation="MYAKNKFKNKKLLGTREVLNEEDEVQPNGKIFKKVILGHYNWLS YEDVFIRAFNFGNGLQVLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLG GPAIVHGLNETEVTNIITSKELLQTKLKDIVSLVPRLRHIVTVDGKPPTWSEFPKGVI VHTMAAVQALGAKASMDNRPQSKPAPTDIAVIMYTSGSTGLPKGVMISHSNIIAGVTG MAERIPRLGCVLLARCAHARRCGVYVCRYINVCYLAVSPLESIYNNRPQSKPAPTDIA VIMYTSGSTGLPKGVMISHSNIIAGVTGMAERIPRLGCVLLARCAHARREEDIYIGYL PLAHVLELSGELVCLSHGCCIGYSSPQTLADQSSKIKKGSKGDTSMLRPTLMAAVPEI MDRIYKNVMNKVNEMSSFQRNLFILAYNYKMEQISKGRSTPLLIFRKVRSLLGGNIRI LLCGGAPLSATTQRFMNICFCCPVGQGYGLTECAGAGTITEVWDYNTGRVGAPLVCCE IKLKNWEEGGYFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKADFFEDENGQRWLCTG DIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLSLIDNICAYANSYHSYV IGFVVPNQKELTELARKKGLKGTWEELCNSCEMENEVLKVLSEAAVSASLEKFEIPVK IRLSPEPWTPETGLVTDAFKLKRKELKTHYQADIERMYGRK" assembly_gap 7227291..7234469 /estimated_length=7179 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7239166..7245939 /estimated_length=6774 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7253340..7257011 /estimated_length=3672 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7259864..7262927 /estimated_length=3064 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7270578..7270749 /estimated_length=172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7300255..7301060 /estimated_length=806 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7319256..7319291 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7373455..7373510 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7378008..7378032 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7381359..7381410 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7385454..>7412758) /locus_tag="PAL_GLEAN10014367" mRNA complement(join(<7385454..7385608,7394096..7394295, 7394835..7395009,7412665..>7412758)) /locus_tag="PAL_GLEAN10014367" /product="2-acylglycerol O-acyltransferase 1" CDS complement(join(7385454..7385608,7394096..7394295, 7394835..7395009,7412665..7412758)) /locus_tag="PAL_GLEAN10014367" /note="GO_function: GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups [Evidence IEA]" /codon_start=1 /product="2-acylglycerol O-acyltransferase 1" /protein_id="ELK17156.1" /db_xref="InterPro:IPR007130" /db_xref="UniProtKB/Swiss-Prot:Q70VZ7" /translation="MKVEFAPLNIPLARRLQTAAVLYFVLCFLVLGPVSVSKKSVSHV LSKETGGNISVIVLGGAEESLDAHPGKFTLFIRQRKGFVKIALTCGAYLVPVFSFGEN ELFKQISNPEGSWLRTLQNRMQKVMGFALPLFHARGIFQYNFGLIPYRKPIYSVVGHP IPVHQTPNPTSEQVEELHQTYMEELRKLFEEHKGKYGIPENETLIFR" gene <7424178..>7481470 /locus_tag="PAL_GLEAN10014368" mRNA join(<7424178..7424235,7426497..7426552,7429342..7429496, 7430875..7430944,7431534..7431649,7435377..7435527, 7436318..7436426,7437384..7437454,7438900..7438961, 7439828..7439879,7443093..7443154,7443432..7443639, 7444146..7444226,7447563..7447655,7451365..7451482, 7463114..7463269,7481319..>7481470) /locus_tag="PAL_GLEAN10014368" /product="Phenylalanyl-tRNA synthetase beta chain" CDS join(7424178..7424235,7426497..7426552,7429342..7429496, 7430875..7430944,7431534..7431649,7435377..7435527, 7436318..7436426,7437384..7437454,7438900..7438961, 7439828..7439879,7443093..7443154,7443432..7443639, 7444146..7444226,7447563..7447655,7451365..7451482, 7463114..7463269,7481319..7481470) /locus_tag="PAL_GLEAN10014368" /note="GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]; GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]" /codon_start=1 /product="Phenylalanyl-tRNA synthetase beta chain" /protein_id="ELK17157.1" /db_xref="InterPro:IPR005146" /db_xref="InterPro:IPR005147" /db_xref="InterPro:IPR009061" /db_xref="InterPro:IPR020825" /db_xref="UniProtKB/Swiss-Prot:Q9NSD9" /translation="MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEI ISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPI GEIQKLIITEETAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIG THDLDTLSGPFTYTAKRPSDIRFKPLNKTKEYTACELMNIYKNDNHLKHYLHIIENKP LYPVICDSNGVILSMPPIINGNHSKITVNTRNVFIECTGTDFTKAKIVLDIIVTTFSE YCENQFTVEAAEVVFPNGKSYTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRM YLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFP LNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVA RTTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDPSRDVGARNYRHLCAVYYNKNPGF EIIHGLLDRIMQLLDVPPGEKKGGYVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHP DVITKFELTMPCSSLEINIEPFL" assembly_gap 7442761..7442820 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7461156..7461169 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7470401..7470467 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7492524..>7525078) /locus_tag="PAL_GLEAN10014369" mRNA complement(join(<7492524..7493075,7509802..7509951, 7512796..7512885,7515449..7515628,7525040..>7525078)) /locus_tag="PAL_GLEAN10014369" /product="Sphingosine-1-phosphate phosphatase 2" CDS complement(join(7492524..7493075,7509802..7509951, 7512796..7512885,7515449..7515628,7525040..7525078)) /locus_tag="PAL_GLEAN10014369" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]" /codon_start=1 /product="Sphingosine-1-phosphate phosphatase 2" /protein_id="ELK17158.1" /db_xref="InterPro:IPR000326" /db_xref="UniProtKB/Swiss-Prot:Q8IWX5" /translation="MRIDGKLSILGLTLVMYIGQVAKDILKWPRPSSPPVVKLEKRVI AEYGMPSTHAMAATAISFTLLISTVDRYQYPFALGLMMAVVFSTLVSLSRLYTGMHTV LDSSGENCEPIAAAYGVQGLPRAVIGPMGREPVYASSGYDWQPPLGLALASDVLGGVL ITAVLIVLTYPAWTLIDHLDSASPLFPVCAIIVPFFLCYNYPVSDYYSPTRADTTTIL AAGAGTTIGFWINHFFQLVSESTQSLPVIRNIPSLTTDMVVLGLTKFAVGIVLILLVR QLVQNLSLQVLYSWFKVLTRNKEARQRLEIEVPYKFVTYTSVGICATTIVPMLHRFLG LL" assembly_gap 7510060..7510075 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7549391..7549805 /estimated_length=415 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7557661..7557680 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7561164..7561702 /estimated_length=539 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7566198..7566287 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7580516..>7580794) /locus_tag="PAL_GLEAN10014370" mRNA complement(<7580516..>7580794) /locus_tag="PAL_GLEAN10014370" /product="Sphingosine-1-phosphate phosphatase 2" CDS complement(7580516..7580794) /locus_tag="PAL_GLEAN10014370" /codon_start=1 /product="Sphingosine-1-phosphate phosphatase 2" /protein_id="ELK17159.1" /db_xref="UniProtKB/Swiss-Prot:Q8IWX5" /translation="MAELLWSLQDSQLVARFQRRCGLFPAPDEGPRENGAGPVEGAAL VPGVGHHSATSRKGAEGPANGLRRAQAPQVTAGQVLVREGGGRGSPAD" assembly_gap 7622783..7622866 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7641590..7642396 /estimated_length=807 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7651665..7657324 /estimated_length=5660 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7660048..7660104 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7660402..7660478 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7665667..7665686 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7668087..>7673667 /locus_tag="PAL_GLEAN10014371" mRNA join(<7668087..7668171,7669466..7669701,7671041..7671167, 7672335..7672593,7673571..>7673667) /locus_tag="PAL_GLEAN10014371" /product="Paired box protein Pax-3" CDS join(7668087..7668171,7669466..7669701,7671041..7671167, 7672335..7672593,7673571..7673667) /locus_tag="PAL_GLEAN10014371" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Paired box protein Pax-3" /protein_id="ELK17160.1" /db_xref="InterPro:IPR001523" /db_xref="InterPro:IPR009057" /db_xref="UniProtKB/Swiss-Prot:P24610" /translation="MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGV FINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIG GSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSK FGKGEEEEVDLERKEAEESEKKAKHSIDGILSERGKRRRARGPSRRRQLRPDAGHARA AKSRLVSRSSSLVPAAPGTVAAKLVPSWTFIARLLDRLLAYRNSSFPNQ" assembly_gap 7689619..7690617 /estimated_length=999 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7703699..7703737 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7706581..7706622 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7727839..>7759180 /locus_tag="PAL_GLEAN10014373" mRNA join(<7727839..7727932,7730368..7730573,7739392..7739557, 7740450..7740664,7758406..7758652,7759146..>7759180) /locus_tag="PAL_GLEAN10014373" /product="Paired box protein Pax-3" CDS join(7727839..7727932,7730368..7730573,7739392..7739557, 7740450..7740664,7758406..7758652,7759146..7759180) /locus_tag="PAL_GLEAN10014373" /note="GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Paired box protein Pax-3" /protein_id="ELK17161.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR022106" /db_xref="UniProtKB/Swiss-Prot:P23760" /translation="MKISTYYYPNGITVRESASNDLSFSQAEEVFASAPQSDEGSDID SEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW FSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQPTAIPQAVSDP SSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNP AIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLD SLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA" assembly_gap 7761211..7761245 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7765926..7766083 /estimated_length=158 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7846163..7846219 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7850840..7850865 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7912974..7913038 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7975654..7975700 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7976183..7976193 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8000500..8000521 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8019388..8019414 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8041398..8041428 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8092602..8092631 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8107562..8107977 /estimated_length=416 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8119455..8119778 /estimated_length=324 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8126762..8126811 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8186974..8186992 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8207286..8207314 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8208654..>8235614 /locus_tag="PAL_GLEAN10014375" mRNA join(<8208654..8208744,8211858..8211925,8216086..8216749, 8235170..8235278,8235527..>8235614) /locus_tag="PAL_GLEAN10014375" /product="Ephrin type-A receptor 4" CDS join(8208654..8208744,8211858..8211925,8216086..8216749, 8235170..8235278,8235527..8235614) /locus_tag="PAL_GLEAN10014375" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005003 - ephrin receptor activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]" /codon_start=1 /product="Ephrin type-A receptor 4" /protein_id="ELK17162.1" /db_xref="InterPro:IPR001090" /db_xref="InterPro:IPR008979" /db_xref="UniProtKB/Swiss-Prot:Q03137" /translation="MAGIFYFVLFSFLFGICNAVTGSRVYPANEVTLLDSKSVQGELG WIASPLEGGWEEVSIMDEKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIK FTLRDCNSLPGVMGTCKETFNLYYYESDNDKERFIRESQFAKIDTIAADESFTQVDIG DRIMKLNTEIRDVGPLSKKGFYLAFQDVGACIALVSVRVFYKKCPLTVRNLAQFPDTI TGADTSSLVEVRGSCVNNSEEKDVPKMYCGADGEWLVPIGNCLCNAGHEERNGECQVQ NGFALLCVEALALFLPQPVQTKEVLRWPQNPLLASSAFQFPLGPALLAVTLQSSVNEF ALPFP" assembly_gap 8235668..8235695 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8264735..>8334590 /locus_tag="PAL_GLEAN10014376" mRNA join(<8264735..8264834,8267443..8267598,8282914..8283252, 8307443..8307567,8308595..8308754,8309887..8309998, 8318147..8318205,8320054..8320167,8320421..8320606, 8324277..8324338,8324796..8325005,8326862..8327011, 8330475..8330668,8333981..8334136,8334476..>8334590) /locus_tag="PAL_GLEAN10014376" /product="Ephrin type-A receptor 4" CDS join(8264735..8264834,8267443..8267598,8282914..8283252, 8307443..8307567,8308595..8308754,8309887..8309998, 8318147..8318205,8320054..8320167,8320421..8320606, 8324277..8324338,8324796..8325005,8326862..8327011, 8330475..8330668,8333981..8334136,8334476..8334590) /locus_tag="PAL_GLEAN10014376" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Ephrin type-A receptor 4" /protein_id="ELK17163.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR001660" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR010993" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011510" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P54764" /translation="MTILYFLLMFVKARGKEKLVSTFKEQKPSVLQIACKIGYYKALS TDATCAKCPPHSYSVWEGATSCTCDRGFFRADNDAASMPCTRPPSAPLNLISNVNETS VNLEWSSPQNTGGRQDISYNVVCKRCGAGDSSKCRPCGSGVHYTPQQNGLKTTKVSIT DLLAHTNYTFEIWAVNGVSKYNPSPDQSVSVTVTTNQAAPSSIALVQAKEVTRYSVAL AWLEPDRPNGVILEYEVKYYEKDQNERSYRIVRTAARNTDIKGLNPLTSYVFHVRART AAGYGDFSEPLEVTTNTVPSRIIGDGANSTVLLVSVSGSVVLVVILIAAFVISRRRSK YSKAKQEADEEKHLNQGVRTYVDPFTYEDPNQAVREFAKEIDASCIKIEKVIGVGEFG EVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAA RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDV WSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKER SDRPKFGQIVNMLDKLIRNPNSLKRTGTENSRPNTALLDPSSPEFSAVVSVGDWLQAI KMDRYKDNFTAAGYTTLEAVVHMNQDDLARIGITAVTHQNKILSSVQAMRTQMQQIHG RMVPV" assembly_gap 8273694..8273713 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8337732..8337765 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8350426..8350464 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8365793..8365814 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8377144..8377156 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8390649..8390676 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8403295..8404033 /estimated_length=739 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8426912..8426941 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8431657..8431677 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8497660..8498138 /estimated_length=479 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8548057..8548120 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8565565..8565735 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8586320..8586368 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8594862..8594920 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8630304..8633804 /estimated_length=3501 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8655774..8655790 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8678175..8678189 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8685591..8685616 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8736672..8736706 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8752370..8752454 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8766374..8766502 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8777238..8777257 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8780711..8780780 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8797206..8797253 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8799313..8799583 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8832191..8838944 /estimated_length=6754 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8841440..8844816 /estimated_length=3377 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8852698..8852707 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8855665..8855751 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8874670..8874679 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8909278..8909974 /estimated_length=697 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8929545..8929601 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8992023..8992033 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9004762..9004804 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9013838..9013851 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9034748..9034780 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9039833..9039871 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9044410..9044621 /estimated_length=212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9053148..9053165 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9063375..9063554 /estimated_length=180 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9090198..9090304 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9115594..9116492 /estimated_length=899 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9122737..9122903 /estimated_length=167 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9129593..9129635 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9157433..9157513 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9187554..9187605 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9190285..9190297 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9205000..9205034 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9207802..9207915 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9218527..9218648 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9255375..9255435 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9298450..9298483 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9350655..9350674 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9352393..9352436 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9360794..9360827 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9401997..9402010 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9415507..9415524 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9451780..9451830 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9480889..9480986 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9485635..9486510 /estimated_length=876 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9501710..9502594 /estimated_length=885 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9512527..9516556 /estimated_length=4030 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9526232..9526255 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9542282..9542313 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9549501..9549541 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9577284..9577489 /estimated_length=206 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9579619..9579648 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9645536..9646471 /estimated_length=936 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9657343..9657421 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9664856..9664880 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9679122..9679145 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9702093..9702167 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9712917..9712964 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9722597..9723574 /estimated_length=978 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9729550..>9739118) /locus_tag="PAL_GLEAN10014377" mRNA complement(join(<9729550..9729627,9730299..9730472, 9730642..9730811,9731134..9731387,9731857..9732023, 9732892..9733110,9733562..9733756,9733945..9734093, 9734456..9734674,9734842..9735067,9735676..9735860, 9736354..9736453,9736899..9737082,9737358..9737493, 9737938..9738118,9738276..9738424,9738902..>9739118)) /locus_tag="PAL_GLEAN10014377" /product="Anion exchange protein 3" CDS complement(join(9729550..9729627,9730299..9730472, 9730642..9730811,9731134..9731387,9731857..9732023, 9732892..9733110,9733562..9733756,9733945..9734093, 9734456..9734674,9734842..9735067,9735676..9735860, 9736354..9736453,9736899..9737082,9737358..9737493, 9737938..9738118,9738276..9738424,9738902..9739118)) /locus_tag="PAL_GLEAN10014377" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_function: GO:0005452 - inorganic anion exchanger activity [Evidence IEA]; GO_function: GO:0008509 - anion transmembrane transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006820 - anion transport [Evidence IEA]" /codon_start=1 /product="Anion exchange protein 3" /protein_id="ELK17164.1" /db_xref="InterPro:IPR001717" /db_xref="InterPro:IPR002979" /db_xref="InterPro:IPR003020" /db_xref="InterPro:IPR011531" /db_xref="InterPro:IPR013769" /db_xref="InterPro:IPR016152" /db_xref="UniProtKB/Swiss-Prot:P48751" /translation="MTSPREEVTEPNGTLSPGPWDAESQGSGMAPAPSPRDSLASEDL EMFVLDLEDCDLGESTRGQLSPMAGGPACHRLEDNPGMRRHLVKKPSRTQGGRGSPGG LAPILRRKKKKKKLDRRPHEVFVELNELMLDRSQEPHWRETARWIKFEEDVEEETERW GKPRVASLSFRSLLELRRTIAHGAALLDLEQTTLPGIAHLVVETMIVSDQIRPEDRAS VLRTLLLKHSHPNDDKDSGFFPRNTSSSSVNSVLGNHHPTPSHGPDGAVPTMADDLGE PAPLWPHDPDAKEKPLHMPGGDSHRGKSLKLLEKIPEDAEATVVLVGCVPFLEQPAAA FVRLNEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIATLMSDKLFHEAAYQ ADDRQDLLSAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQTKVEMTT RGSCVAPGKELSVELGGSEATPEDDPLRRTGSVFGGLVRDVKRRYPHYPSDLRDALHS QCVAAVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLV VGFSGPLLVFEEAFFKFCRAQDLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPF TQEIFAFLISLIFIYETFHKLYKVFTEHPLLPFYPPERALEAGPDLNGSALPPTEGPP GPRNQPNTALLSLILMLGTFLIAFFLRKFRNSRFLGGKKLTVPTGLSVTSPDKRTWFI PPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLKGSGFHLDLLL IGSLGGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTGVLI ASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLILMPAKHHPEQPY VTKVKTWRMHLFTCIQLGCIALLWVVKSTAASLAFPFLLLLTVPLRRCLLPRLFQDRE LQALDSEDAEPNFDEDGQDEYNELHMPV" gene complement(<9739474..>9742297) /locus_tag="PAL_GLEAN10014379" mRNA complement(join(<9739474..9739616,9740020..9740219, 9740589..9740704,9740871..9741151,9741743..9741908, 9742247..>9742297)) /locus_tag="PAL_GLEAN10014379" /product="Anion exchange protein 3" CDS complement(join(9739474..9739616,9740020..9740219, 9740589..9740704,9740871..9741151,9741743..9741908, 9742247..9742297)) /locus_tag="PAL_GLEAN10014379" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005452 - inorganic anion exchanger activity [Evidence IEA]; GO_process: GO:0006820 - anion transport [Evidence IEA]" /codon_start=1 /product="Anion exchange protein 3" /protein_id="ELK17165.1" /db_xref="InterPro:IPR002979" /db_xref="UniProtKB/Swiss-Prot:B1MTL0" /translation="MANGVIPPPGGASPLPQVRVPLEEPPLSPDMEEEDDDLGKTLAV SRFGDLISKPPAWDPEKPSRSYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPSTS ARQTRGKRKKEKTSAAPSEGTPPIQEERGAGVEEDEEEEEEEEEGESEAEPVEPLPSG SPQKAKFSIGSDEDDSPGLSVRATFTKPLPSGNPRSDKSPQHSVSSPSSRARASRVAG EKSRPWSPSASYDLRERLCPGSALGSLGGPEQQVPTDEAEAQMLGSADLDDMKRAPSL LSSHPWLDLAVISAHSFHLISALVSVPPVITHEALCLGQGHQ" assembly_gap 9742459..9742956 /estimated_length=498 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9753504..>9767738) /locus_tag="PAL_GLEAN10014380" mRNA complement(join(<9753504..9753653,9754363..9754553, 9755095..9755165,9755393..9755474,9755693..9755871, 9755973..9756070,9757109..9757212,9757333..9757563, 9759237..9759414,9759505..9759621,9759913..9760118, 9760279..9760608,9761140..9761224,9761417..9761551, 9761768..9761809,9762027..9762122,9762255..9762358, 9762577..9762703,9763764..9763835,9763954..9764061, 9764424..9764519,9764726..9764800,9765003..9765208, 9767244..9767329,9767563..>9767738)) /locus_tag="PAL_GLEAN10014380" /product="Serine/threonine kinase 11-interacting protein" CDS complement(join(9753504..9753653,9754363..9754553, 9755095..9755165,9755393..9755474,9755693..9755871, 9755973..9756070,9757109..9757212,9757333..9757563, 9759237..9759414,9759505..9759621,9759913..9760118, 9760279..9760608,9761140..9761224,9761417..9761551, 9761768..9761809,9762027..9762122,9762255..9762358, 9762577..9762703,9763764..9763835,9763954..9764061, 9764424..9764519,9764726..9764800,9765003..9765208, 9767244..9767329,9767563..9767738)) /locus_tag="PAL_GLEAN10014380" /codon_start=1 /product="Serine/threonine kinase 11-interacting protein" /protein_id="ELK17166.1" /db_xref="UniProtKB/Swiss-Prot:Q8N1F8" /translation="MEAQFRDGVPAQGAGTEGPPPPKPAGTSPRPPPPHQTRLHDLGR GFWQRRRVFRSSLPGLRPQRPVAMTTAPRDSLLWKLAGLLRESGDVVLSGCSTLSLLT ATLQQLNHVFELYLGPWGPGQTGFVALPSHPTDSPVILQLQFLFDVLQKTLSLKLVHV PGPGVPGPIKIFPFKSLRQLELRGVPIHCLRGLRGIYSQLETLICSRSIQALEELLSA CGGDLCSALPWLALLSANFSYNALTALDSSLHLLSALHFLNLSHNQLQDCKGFLMDLS ELCHLDISYNRLRLVPRMGPSGSALGTLILRGNELRSLHGLEQLRHLRHLDLAYNLLE EHRELSPMRLLAELRKLYLEGNPLWFHPAHRAATAQYLSPRARDATPSFLLDGEVLSL ADFQTSTSSEAPPLSWPVGSTTETSGGADLSDSLSSGGVVAQPPPRKVKSRVRVRRAS ISEPSDTDLEPRTLDPSPAGRFVQQHRELELMNSFREQFGCDWLQYRNHLETSGTSVV ANSKTPALSTLSPDTLSPETVPSPPTGPLPSEMKSVQEVAEVRVGPEPQEEEEMEGEG KEEEEEQEQNEVEAELCRPILVCPLEGPQGVRGRQRFLRVTSGHLFEVELQAARTLER LELQSLEAAEIESETQTQREPAPEDSELPSGAPVLALRFSYICPDRHLRRYVVLEPDA HAAVQELLAVLTPAVTEAQHQLEEARDPLGDRLQCLRCGHEFKPGDSRLRLDSEESWR PLFQNTESPAVCPNCGSDHVVLLALSAGVLNREQRQEEQLPAPSPAPSTVCDPPGHSD HSNRADSAPSQALVSHDGHRWSLSPPPERCGLRSVDHRLRLFLDVEVFADAQEEFQCC IKVPLLLAGHPGECLCLVVVSDHRLYVLKVTGEICGPPASWLQPALAVPLQDLSCIEL GLAGQSLRLEWAAGAGSCVLLPRDAKRCRAFLDELTDVLQSLPPTWRSNVSATEEEVT PKHRLWPLLERDSSLEPPRFFYLRVFLVEDEDLKGSQAEAPLPAASGEASEKAPPSGP GLSLCVREQQPLSSLSSVLLYRTAPEDLRLVFYDEVSRLESFWALRVVCLEQLTALLA WVREPWEQLFSIGLRTMTQETLDLDR" assembly_gap 9754598..9754616 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9782316..>9784772) /locus_tag="PAL_GLEAN10014381" mRNA complement(join(<9782316..9783148,9784502..>9784772)) /locus_tag="PAL_GLEAN10014381" /product="Inhibin alpha chain" CDS complement(join(9782316..9783148,9784502..9784772)) /locus_tag="PAL_GLEAN10014381" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0008083 - growth factor activity [Evidence IEA]" /codon_start=1 /product="Inhibin alpha chain" /protein_id="ELK17167.1" /db_xref="InterPro:IPR001839" /db_xref="InterPro:IPR002405" /db_xref="UniProtKB/Swiss-Prot:P04087" /translation="MLPQLPLLLLLLVVPQRVHSCHGPEVDRELVLAKVRALFLDALG PPAVTGEGGNPGVRRLLRRHAVGGFMRRGSEPVEEDVSQAILFPATGASCEDQPAVGE LAQEAEEGLFTYMFRPSQHTRSRQVTSAQLWFHTGLDRQATASSNSSGPLLGLLALSS KGPTAVPTSLGQAPPCWAVLHMAASALPLLTHPVLVLLLRCPLCSCSARPETTPFLVA HTRAKPASRGDRARRSTPPLPWPWSPAALRLLQRPPEEPAAHAHCHRAALNISFQELG WDQWIVHPPSFVFHYCHGGCGLPTQSDLPLPVSGVPPTPVQPFSLVPGAQPCCAALPG TMRPLRVRTTSDGGYSFKYETVPNLLTQHCACI" assembly_gap 9785825..9786352 /estimated_length=528 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9786358..>9804827 /locus_tag="PAL_GLEAN10014382" mRNA join(<9786358..9786874,9788335..9788604,9788689..9788940, 9789106..9789408,9789576..9789872,9791015..9791287, 9792474..9792746,9793426..9793698,9796764..9797036, 9797826..9798101,9798176..9798463,9798649..9798924, 9799546..9799815,9799973..9800245,9801264..9801530, 9802663..9802775,9803319..9803475,9803645..9803806, 9804130..9804234,9804550..>9804827) /locus_tag="PAL_GLEAN10014382" /product="Obscurin-like protein 1" CDS join(9786358..9786874,9788335..9788604,9788689..9788940, 9789106..9789408,9789576..9789872,9791015..9791287, 9792474..9792746,9793426..9793698,9796764..9797036, 9797826..9798101,9798176..9798463,9798649..9798924, 9799546..9799815,9799973..9800245,9801264..9801530, 9802663..9802775,9803319..9803475,9803645..9803806, 9804130..9804234,9804550..9804827) /locus_tag="PAL_GLEAN10014382" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Obscurin-like protein 1" /protein_id="ELK17168.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:O75147" /translation="MALDEVWDSSHFVLEPGRAEGGGGASLALRILAARLPDSGVYVC HARNAHGHAQAGALLQVHQPRESPPQDPDEAPKPVVEPVKCAPKTFWVNEGKHAKFRC YVMGKPEPEIEWHWEGRPLLPDRRRLMYRDRDGGFVLKVLYCQAKDRGLYVCAARNSA GQTLSAVQLHVKEPRLRFSRPLQDVEGREHGIAVLECKVPNSRIPTAWFREDQRLLPC RKYEQIEEGTVRRLIIHRLKADDDGVYLCEMRGRVRTVANVTVKGPIVKRLPRKLDVL EGENAVLLVETQEAGVEGHWSRDGEDLPTTCQSSSGHMHALVLPGVTREDAGEVTFSL GNSRTTTLLRVKCVKHNPPGPPVLAEMFKGHKNTVLLTWKPPEPAPETPFIYRLERQE VGSEDWIQCFSIEKAGAVEVPGDCVPSEGDYRFRVCTVSEHGRSPHVVFHGSAHLVPT ARLVAGLEDVQVYDGEDAVFSLDLSTIIQGTWFLNGEELKSTEPEGQVEPGALRYRVE HKGLQHRLILQGVKHQDSGALVGFSCPGVQDSAALTIQESPVHILNPQDKVSLTFTTS EQVVLTCELSRVDFPASWYKDGQKVDESESLVVKMDGRKHCLVLPAAEVRDSGEFECR TEGVSAFFSVTIQDPPVHILNPQEHVFVHAITSECVMLTCEVDREDAPVQWYKDGQEV EASDFVVLENEGPHHHLVLPAAQPPDGGEFQCVAGDERACFTVTITDVSSWIVYPSGK VYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVAESPALLLQKEDTIRRLVLPAVQLE DSGEYLCEIDDESASFTVTVTEPPVRIIYPRDEVTLIAVSLECVVLMCELSREDAPVR WYKDGLEVEESEALVLESDGPRRRLVLPAAQPEDGGEFVCDAGDDSAFFTVTVTAPPE RIVRPAARSLDLQFGAPGRVELRCEVAPAGSQVRWYKDGLEVEASDALQLGAEGPTRT LTLPHAQPEDAGEYVCETHDEAVTFNVSLAEPPVQFLAPEAAPGPLCVAPGEPVVLSC ELSRAGAPVFWSHNERPVQEGKGLELRTEGPRRILCIQAAEPAHAGLYTCQCGVAPGA PSFSFTVQVAESPVRVVAPEVAQTRVCSTPGGDLELVVHLSGPGATVRWYKDGERLVS LGRVQLEQAGARQVLRVRGARSRDAGEYLCDAPQDSRIFLVSVEEPPLVKLVSELTPL TVHEGDDATFRCEVSPPDADVTWLRNGAVVTPGPQLEMAQNGSSRTLTVRGCQLKDAG TVTARAGGTATSARLHVREMELLFLRRLQDMRVEEGQDVCLEVETGRVGAAGAVRWVR GGEPLPHDSRLSMAQDGHVYRLFIHGVVLADQGTYGCESHHDRTLARLSVRPRQLRVL QPLKDVTIIEGGSATFQLELSQDGVTGEWARGGVRLHPGPQCHIHAEGHTHHLVLSGL GLADSGCVSFTTDSLRCAARLTVREAPVTIVQGPQDLEVTEGDTATFECELSQALADV TWEKDGRRLIPSPRLRLQALGTRRLLQLRRCSPLDSGNYSCAVGPARAGPVRLTVRER VVSVLSELRSVRAREGDSATFECTVSEVEITGSWKLGGRPLRPGGRVRIRQEGKKHIL VLSELRTEEAGEVHFQAGPAQSVAELEVEALPLQMCRRPPREKTVLVGRRAVLEVTVS RSGDHVCWLREGVKLCPGDKYELRSHGSTHSLVIHDVRPEDQGTYCCQAGQDSAHTRL LVEGE" gene complement(<9806538..>9811533) /locus_tag="PAL_GLEAN10014383" mRNA complement(join(<9806538..9806675,9807054..9807256, 9808271..9808846,9811368..>9811533)) /locus_tag="PAL_GLEAN10014383" /product="Transmembrane protein 198" CDS complement(join(9806538..9806675,9807054..9807256, 9808271..9808846,9811368..9811533)) /locus_tag="PAL_GLEAN10014383" /codon_start=1 /product="Transmembrane protein 198" /protein_id="ELK17169.1" /db_xref="UniProtKB/Swiss-Prot:Q66K66" /translation="MPGTVATLRFQLLPPEPDDVFWGAPCEQPLERRYQALPALVCIM CCLFGVVYCFFGYRCFKAVLFLTGLLFGSVVIFLLCYRERVLETQLSAGASAGIALGI GLLCGLVAMLVRSVGLFLVGLLLGLLLAAAALLGSAPYYQPASVWGPLGLLLGGGLLC ALLTLRWPRPLTTLATAVTGAALIATAADYFAELLLLGRYAMERLRAAPVPPLCWRSW ALLALWPLLSLMGVLVQWRVTAEGDSHTEVVISRQRRRVQLMRIRQQEERKEKRRKKR PPRAPSRGPRAPPRPRPPDPAYRRRPVPIKRFNGDVLSPSYIQSFRDRQTGSSLSSFM ASPTDTDYEYGSQGPLTACSGPPVRV" assembly_gap 9812676..9812740 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9812751..>9816937 /locus_tag="PAL_GLEAN10014385" mRNA join(<9812751..9813064,9814072..9814645,9815152..9815331, 9815662..9816447,9816545..>9816937) /locus_tag="PAL_GLEAN10014385" /product="Chondroitin sulfate synthase 2" CDS join(9812751..9813064,9814072..9814645,9815152..9815331, 9815662..9816447,9816545..9816937) /locus_tag="PAL_GLEAN10014385" /note="GO_component: GO:0032580 - Golgi cisterna membrane [Evidence IEA]; GO_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA]" /codon_start=1 /product="Chondroitin sulfate synthase 2" /protein_id="ELK17170.1" /db_xref="InterPro:IPR008428" /db_xref="UniProtKB/Swiss-Prot:Q8IZ52" /translation="MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQ PGDSELPQRGNTNAARRPNSVQPGAERERPGAGAGAGENWEPRVLPYHPAQPGQAAKK AVRTRYISTELGIRQRLLVAVLTSQATLPTLGVAVNRTLGHRLERVVFLTGSRGRRAP PGMAVVTLGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDTTYTEAHGLARLAGRLSL AAAAHLYLGLPQDFIGGEPTPGRYCHGGFGVLLSRTLLQQLRPHLESCRNDIVSARPD EWLGRCILDATGVGCTGDHEGVHYSYLELSPGEPVQEGDPRFRSALTAHPVRDPVHMY QLHKAFARAELERTYQEIQELQWEIQNTSRLAADGERAATWPVGIPAPSRPASRFEVL RWDYFTEHHAFSCADGSPRCPLRGADQADVADILGAALEELNRRYHPALRLQKQQLVN GYRRFDPARGMEYTLDLQLEALTPEGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRL TVLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRAAHADVFAPV KAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFMLAGPDTAFHPVV APPQGPGPPELGRDTGRFDRQAASEACFYNSDYVAARGRLAAASEQEEELLESLDVYE LFLRFSGLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCRQSALEGLGSRTQLAMLLF EQEQGNST" assembly_gap 9816467..9816517 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9818297..>9838983) /locus_tag="PAL_GLEAN10014386" mRNA complement(join(<9818297..9818410,9818598..9818742, 9818831..9819113,9819190..9819281,9820510..9820621, 9822109..9822165,9822668..9822830,9823019..9823146, 9823237..9823381,9838402..>9838983)) /locus_tag="PAL_GLEAN10014386" /product="Amiloride-sensitive cation channel 4" CDS complement(join(9818297..9818410,9818598..9818742, 9818831..9819113,9819190..9819281,9820510..9820621, 9822109..9822165,9822668..9822830,9823019..9823146, 9823237..9823381,9838402..9838983)) /locus_tag="PAL_GLEAN10014386" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005272 - sodium channel activity [Evidence IEA]; GO_process: GO:0006814 - sodium ion transport [Evidence IEA]" /codon_start=1 /product="Amiloride-sensitive cation channel 4" /protein_id="ELK17171.1" /db_xref="InterPro:IPR001873" /db_xref="UniProtKB/Swiss-Prot:Q9JHS6" /translation="MPIEIVCKIKFAEEDAKPKEKEAGDEQSLLGAARGAAAPRDLAT FASTSTLHGLGRACGPGPHGLRRTLWALALLTSLAAFLYQAAGLARGYLTWPHLVVMD PAAPAPVAGFPAVTLCNINRFRHSALSDADIFHLANLTGLPPKDRDGHRAAGLRYPEP DMVDILNRTGHQLADMLKSCNFSGHHCSASNFSVVYTRYGKCYTFNADPKSSLPSRVG GMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQEEPPYIHQLGFGVSPGFQ TFVSCQEQRLTYLPQPWGNCRAESGLREPELQGYSAYSVSACRLRCEKEAVLQRCHCR MVHMPGNETICPPNIYIECADHTLDSLGGGSEGPCFCPTPCNLTRYGKEISMVRIPNR GSARENFLVLDVFFEALTSEAMEQRAAYGLSALLGDLGGQMGLFIGASILTLLEILDY IYEAREGGLAGAPQTASVGCEKELWEKQRVRAGFLVELFWLESQALGSLSGYPDRLAT RRPKGAEESEGKGFLSPLLFPTLNPKVSWDRLKKVWRRPKTPLRTSTGGISTLGLQEL KEQSPCPSRGRAEGGGASSLLPNHHQPHGPPGGLFEDFAC" gene complement(<9847025..>9852962) /locus_tag="PAL_GLEAN10014387" mRNA complement(join(<9847025..9847125,9847436..9847604, 9847728..9847820,9848034..9848080,9848249..9848346, 9848457..9848591,9849600..9849730,9850793..9850852, 9851202..9851388,9851673..9851776,9852724..9852821, 9852923..>9852962)) /locus_tag="PAL_GLEAN10014387" /product="Mannose-1-phosphate guanyltransferase alpha" CDS complement(join(9847025..9847125,9847436..9847604, 9847728..9847820,9848034..9848080,9848249..9848346, 9848457..9848591,9849600..9849730,9850793..9850852, 9851202..9851388,9851673..9851776,9852724..9852821, 9852923..9852962)) /locus_tag="PAL_GLEAN10014387" /note="GO_function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO_process: GO:0009058 - biosynthetic process [Evidence IEA]" /codon_start=1 /product="Mannose-1-phosphate guanyltransferase alpha" /protein_id="ELK17172.1" /db_xref="InterPro:IPR005835" /db_xref="UniProtKB/Swiss-Prot:B0CM52" /translation="MLKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEAC AQVPGMQEILLIGFYQPDEPLTRFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQI LAGGPEAFFVLNADVCSDFPLSDMLAAHRHQPHPFLLLGTTANRTQSLNYGCIVENPQ THEVLHYVEKPSTFVSDIINCGIYLFSPEALKPLRDVFYRNQQDGQLEDSSGLWRGAG TIRLEQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLGQYQLTHPERLAKH SPGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGEGVTVGEGVRLRESIVLHGATLQEHT CVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRAHMDSESLFKDGKLLPAITILGCRVR IPAEVLILNSIVLPHKELSRSFTNQIIL" gene complement(<9855554..>9856446) /locus_tag="PAL_GLEAN10014388" mRNA complement(join(<9855554..9856004,9856319..>9856446)) /locus_tag="PAL_GLEAN10014388" /product="CAVP-target protein" CDS complement(join(9855554..9856004,9856319..9856446)) /locus_tag="PAL_GLEAN10014388" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="CAVP-target protein" /protein_id="ELK17173.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:P05548" /translation="MSKAAPAKKPAAAAPPPGCTLDINDPQVQKAAIRIQASYRGHRS RKELREKGPPRVLEPLKDVVLIEGSAAKLTCRISAFPDPFIRWSKDGKELRDGPKYRY VFEDPDVVALVVRDGELADLGQYSINVTNPFGQCSDSARILVEGTRAPGAVPQSRAAP PRGRPQRGPAAHSALGLPESGWRCGQPSPSRV" assembly_gap 9856194..9856216 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9859689..>9862110) /locus_tag="PAL_GLEAN10014389" mRNA complement(join(<9859689..9859881,9860234..9860383, 9860784..9860859,9861705..9861928,9862016..>9862110)) /locus_tag="PAL_GLEAN10014389" /product="Striated muscle preferentially expressed protein kinase" CDS complement(join(9859689..9859881,9860234..9860383, 9860784..9860859,9861705..9861928,9862016..9862110)) /locus_tag="PAL_GLEAN10014389" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Striated muscle preferentially expressed protein kinase" /protein_id="ELK17174.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q15772" /translation="MSLHEAYITPRYLVLITESCGNRELLCGLSDRFRYSEDDVATYV VQLLQGLDYLHGRHVLHLDIKPDNLLLAPDNALKIVDFGSAQPYNPQALRPLGHRTGT LEFMAPEMVKGEPIGSATDIWGVGVLTYIMLSGHSPFYEPDPQETEARIVGGRFDAFQ LYPNTSQSATLFLRKVLSVHPWSRPSLQDCLAHPWLQDAYLMKLRRQTLTFTTNRLKE FLGEQRRRRAEAATRHKVLLRSYPGSP" gene complement(<9862682..>9913756) /locus_tag="PAL_GLEAN10014390" mRNA complement(join(<9862682..9863358,9863481..9863648, 9863822..9863944,9864057..9864224,9867111..9867242, 9867593..9867941,9868019..9869593,9870922..9870964, 9871128..9871280,9871936..9871962,9872488..9872666, 9872773..9872850,9873443..9873500,9874554..9874754, 9874882..9874978,9875228..9875396,9875819..9875931, 9878077..9878252,9878369..9878492,9878875..9879081, 9879664..9879768,9879992..9880111,9882495..9882718, 9882825..9883014,9883120..9883278,9884387..9884647, 9887141..9887316,9888203..9888291,9888539..9888714, 9897154..9897336,9897699..9897842,9899605..9900908, 9903648..9903984,9904068..9904157,9913378..>9913756)) /locus_tag="PAL_GLEAN10014390" /product="Striated muscle preferentially expressed protein kinase" CDS complement(join(9862682..9863358,9863481..9863648, 9863822..9863944,9864057..9864224,9867111..9867242, 9867593..9867941,9868019..9869593,9870922..9870964, 9871128..9871280,9871936..9871962,9872488..9872666, 9872773..9872850,9873443..9873500,9874554..9874754, 9874882..9874978,9875228..9875396,9875819..9875931, 9878077..9878252,9878369..9878492,9878875..9879081, 9879664..9879768,9879992..9880111,9882495..9882718, 9882825..9883014,9883120..9883278,9884387..9884647, 9887141..9887316,9888203..9888291,9888539..9888714, 9897154..9897336,9897699..9897842,9899605..9900908, 9903648..9903984,9904068..9904157,9913378..9913756)) /locus_tag="PAL_GLEAN10014390" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Striated muscle preferentially expressed protein kinase" /protein_id="ELK17175.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q15772" /translation="MQKARGTRGEEAGTRAPPSPGVPPKRAKVGAGGGAVAGAPVFLR PLKDAAVFVGSDLRLRVVVSGTPQPSLSWFQDGQLLPLPAPEPSCLRLRSCSAQDAGV YSCRAQNERGQACCEAVVTVLEVGDSEIGEDDISDVQGTQRLELRDDGTFSTPTGGSD TLVGTSLDTPPTSMTGTSEEQVSWWGSGQTVLEQEAGSRGGTSRLPGSPRQAQAAGAG PRHLGVEPLVRASRANLVGASWGSEDSLSVASDLYGSAFSLYRGRALSIHVSVPQSGL HREEPDFQPQLASEAPRRPTLPPPSKSALLPPPSPRVGKRPPPGPSAQPPATPTSPHR RTQELVLPEDTIADEKRGKKVKSSGPSLVGTAESRPQTPLSEASGRLSALGRSPRLVR ASSRILDKLQFFEERRRSLERSDSPPAPLRPWVPLRKARSLEQPKSQGDAPWGSPGAS QEELRAPAGSVAERRRLFQQKAASLDERTRQRSPASDLELRFAQELGRIRRSTSREEL VRSHESLRATLQRAPSPREPGEPPLFSRPSSPKTPRAVSPAAAQPPSPSVAGRLGEEP GRPRSRGPAGRTELGEGPQQEVRRRDQFPLTRGRAIQESRNPVPAPAPADPPEARTKA PTGRKREPPAQAVRFLPWATPGQEGAEVPQTLEKNRAGPEAEKRLRRGLEEDGPWGSW DRRGARSQGRGRRARPTSPELESSDDSYVSAGEEPLEAPVFEIPLQNAVVAPGADVLL KCIVTANPQPQVSWQKDGSVLRSDGRLLIRAEGERHTLLLREARAADAGSYTATATNE LGQASCAATLAVRPGGSTSPFSSPITSDEEYLSPPEEFPEPGETWPRTPTMKLSPSQN HQASDTGSKAPPTFKVSLMDQSVREGQDVTMSIRVQGEPKPVVSWLRNRQPVRPDQRR FAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRAHPESRSLAVLAP LQDVDVGAGEMALFECLVAGPADVEVDWLCRGRLLQPALLKCKMHFDGRKCKLLLTSV HEDDSGVYTCKLSTAKDELTCSARLTVRPSLAPLFTRLLEDVEVLEGRAARFDCKISG TPPPSVTWTHFGHTVEESENLRLRQDGGLHSLHIAHVGSEDEGLYAVSAANTHGQAHC SAQLYVEEPRTAATGPSSKLEKMPSIPEEPEQGELERLSMPDFLRPLQDLEVGLAKEA MLECQVTGLPYPTISWFHNGHRIQSSDDRRMTQYRDVHRLVFPAVGLQHAGVYKSVIA NKLGKAACYAHLYVTDVIPGPPDGAPQVVAVTGRMITLTWNPPRSLDMAIDPDALTYT VQHQVLGSDQWTALATGLREPGWSATGLRKGVHHIFRVLSATIKSSSKPSPPSEPVQL LEHGPPLEEAPAVLDKPDLVYVVEGQPATVTVTFNHVEAQVVWRSCRGALLEARAGVY ELSQPDDDQHCLRICRVSHRDMGALTCTARNRHGTQACSVTLALAEAPRFESIMEDVE VEAGETARFAVVVEGKPLPDIMWYKDEVLLTESSHVSFVYEEAECSLVVLSTGAQDGG VYTCTARNLAGEVSCKAELAVHSAQTAMEVEGAGEDEEQRGRRLSDFYDIHQEIGRGA FSYLRRVVERSSGLEFAAKFIPSQAKPKASAWREARLLARLQHDCVLYFHEAFERRRG LVIVTELCTEELLERMARKPTVCESEIRAYMRQVLEGICYLHQNHVLHLDVKPENLLL WDGAEGEEQVRICDFGNAQELTLGEPQYSQYGTPEFVAPEIVNQTPVSGVTDIWPVGV VAFLCLTGISPFVGENDRTTLMNIQNYNVAFEETTFLSLSREARSFLITVLVQDQLRP TAEETLEHSWFKRSQISYKCHLMLRPIPELLRAPPERVWVAVPRRPPTSGGLSSSSDS EEEELEELPSVPRPLQPEFSGSRVSLTDIPTEDEALGTPEAGAATPMEWQEQGRATSQ DQEAPSPQTLPSPSQEPLAGPSPLRGELRRGSSAESALPRAGPREPGRGLQKAASVEL PQRRSPSPGATRLTRGGLGEGEYAQRLQALRQRLLRGGPEDGKVSGLRGPLLESLGNR ARDPRLARAASSEAAPRHQPPPETRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPVARL GARRLQESPSLSALSETQPPSPVQPSAPKPSVPKPSAPKSPKLSTTTPNDTPQSLAPQ PAQKKAPESKVEAIPAPKPTQPPVALQTPTTPLTPYAQIIQSLQLSGQGQSLSQGPAT PPTEPKSHPAVFARVASPARGASDKRVPSAAAHPVPAEKAQVPTVPRRPGSSLSSSIE NLESEAVFEAKFKRSRESPLSRGLRMLSRSRSEERGPFRGAEEDGMYRPSPAGTPLEM VRRPERSRSVQDLRAPRPGSHPAWETRGGDGESSEGGSSARGSPVLAVRRRLSSTLER LSSRLQRSGSSEDSGGASGRSTPLFGRLRRATSEGESLRRLGLPHNQLAGQAGATTPS AESLGSEASGTSGGSAPGESRSRLRWGLSRLRKDKGSSQSNLSASVQEDLGHQYVRSE SDKQSLRSEPSVIIVSCKDGRQLLSIPRAGKRHAGLYECSATNVLGSVTSSCTVAVAR VPGKLAPPEVPQTYQDTALVLWKPGDSRAPCTYTLERRVDGESSWHPVSSGILDCYHN VTHLPIGVTVRFRVACANRAGQGPFSNPSEKVFIRGMQDSSALSPAAHQDAPVTSGLT RAPPPDSPTSLAPSPTPTAAPAPPGPQSAIFSPSSPPRPPGQALSSLKAVGPPPQTPP RKHRGLQAARQAEPTPPSTHVPLSEPESSVPDAGTPTAASTPQAVKPVSSSTPLYMVT SFVSAPPAPEPPAPEPPPEPTKVTVRTLSPTKEVVSPPGGGPPTSPGPGPEGTTLRQG LPQKPYTFLEEKARQAGPGKGRRAEGGAGGA" assembly_gap 9904206..9904268 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9906134..9906183 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9906523..9906892 /estimated_length=370 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9911831..9912238 /estimated_length=408 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<9920502..>9926676) /locus_tag="PAL_GLEAN10014391" mRNA complement(join(<9920502..9920543,9920752..9920834, 9922375..9922418,9923672..9923892,9924293..9924418, 9924556..9924717,9924868..9924996,9925085..9925145, 9926096..>9926676)) /locus_tag="PAL_GLEAN10014391" /product="Desmin" CDS complement(join(9920502..9920543,9920752..9920834, 9922375..9922418,9923672..9923892,9924293..9924418, 9924556..9924717,9924868..9924996,9925085..9925145, 9926096..9926676)) /locus_tag="PAL_GLEAN10014391" /note="GO_component: GO:0005882 - intermediate filament [Evidence IEA]" /codon_start=1 /product="Desmin" /protein_id="ELK17176.1" /db_xref="InterPro:IPR006821" /db_xref="InterPro:IPR009053" /db_xref="InterPro:IPR016044" /db_xref="UniProtKB/Swiss-Prot:P02540" /translation="MSQAYSSSQRVSSYRRTFGGAPAFSLGSPLSSPVFPHAGFGSKG SSSSVTSRVYQVSRTSGGAGGLGSLRGSRLGSARVPSSSYGAGELLDFSLADAVNQEF LTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPTRVAEIYEEEL RELRRQVEVLHNQRARVDVERDNLLDDLQRLKAKLQEEIQLKEEAENNLAAFRGVTLF LLFDLPQDVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQEQQVQVEMD MSKPDLTAALRDIRAQYETIAAKNISEAEEWYKSKVSDLTQAANKNNDALRQAKQEMM EYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDE MARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLPIQTFSALNFRETSPEQRGS EVHTKKTVMIKTIETRDGEVVSEATQQQHEVL" assembly_gap 9932828..9932875 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9941168..>9959905 /locus_tag="PAL_GLEAN10014392" mRNA join(<9941168..9941293,9948803..9948896,9948983..9949071, 9949173..9949286,9949538..9949663,9949855..9949985, 9950276..9950351,9950469..9950576,9951295..9951372, 9952373..9952456,9953420..9953580,9953968..9954007, 9954132..9954233,9959320..9959487,9959855..>9959905) /locus_tag="PAL_GLEAN10014392" /product="Aspartyl aminopeptidase" CDS join(9941168..9941293,9948803..9948896,9948983..9949071, 9949173..9949286,9949538..9949663,9949855..9949985, 9950276..9950351,9950469..9950576,9951295..9951372, 9952373..9952456,9953420..9953580,9953968..9954007, 9954132..9954233,9959320..9959487,9959855..9959905) /locus_tag="PAL_GLEAN10014392" /note="GO_component: GO:0005773 - vacuole [Evidence IEA]; GO_function: GO:0004177 - aminopeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Aspartyl aminopeptidase" /protein_id="ELK17177.1" /db_xref="InterPro:IPR001948" /db_xref="UniProtKB/Swiss-Prot:Q2HJH1" /translation="MVFSLSAASFPNSWFPGYPEAAGPVSTFVFSGSVPASAEHRPVA MSGRARKEAVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKEAESWDIKPES KYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQMGFQQVGVET YGGGIWNTWFDRDLTLAGRVIIKCPTSGRLEQRLVHVDRPILRIPHLAIHLQRNINEN FGPNMEMHLVPIIATAVQEELEKGTPEPGPLSAADDRHHSVLMSLLCAHLGLSPEDIL EMELCLADTQPAVLGGAYEEFIFAPRLDNLHSCFCALQALIDSCAAPASLAADPHVRM IALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIPKSYMISADMAHAVH PNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASNVGVPLQDLMVRND SPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTLTLFKGFFELFPSL SRNLSVD" assembly_gap 9947697..9948154 /estimated_length=458 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9948649..9948686 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9966491..9966851 /estimated_length=361 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9991627..9991651 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <9993053..>10010496 /locus_tag="PAL_GLEAN10014394" mRNA join(<9993053..9993167,9994615..9994665,9994900..9995013, 9997891..9997987,9998995..9999256,9999337..9999682, 10000107..10000238,10000859..10000893,10001531..10001805, 10002005..10002091,10002410..10002489,10002652..10002716, 10003320..10003538,10003983..10004183,10004288..10004435, 10004597..10004670,10004912..10004989,10005101..10005220, 10006197..10006363,10009250..10009303,10009934..10009998, 10010143..10010216,10010425..>10010496) /locus_tag="PAL_GLEAN10014394" /product="Receptor-type tyrosine-protein phosphatase-like N" CDS join(9993053..9993167,9994615..9994665,9994900..9995013, 9997891..9997987,9998995..9999256,9999337..9999682, 10000107..10000238,10000859..10000893,10001531..10001805, 10002005..10002091,10002410..10002489,10002652..10002716, 10003320..10003538,10003983..10004183,10004288..10004435, 10004597..10004670,10004912..10004989,10005101..10005220, 10006197..10006363,10009250..10009303,10009934..10009998, 10010143..10010216,10010425..10010496) /locus_tag="PAL_GLEAN10014394" /note="GO_function: GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO_function: GO:0016791 - phosphatase activity [Evidence IEA]; GO_process: GO:0006470 - protein dephosphorylation [Evidence IEA]; GO_process: GO:0016311 - dephosphorylation [Evidence IEA]" /codon_start=1 /product="Receptor-type tyrosine-protein phosphatase-like N" /protein_id="ELK17178.1" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR021613" /db_xref="UniProtKB/Swiss-Prot:P56722" /translation="MRRPRRPGGAGGSGGLRVLLCLLLLSSRPGGCSAISAHGCLFDR RLCSHLEVCIQDGLFGQCQVGVGQARPLLQVTSPILQRLQGVLRQLMSQGLSWHDDLT QYVISQEMERIPRLRPPELHPRDRSGSVPRRPGPAGELLLQGIPTGSAPAAQPRLPRP AMGGDGAGAGSPLNPLQAELLPPLLEHLLLPPQPPHPALSYEPALLQPYLFHQFGSRD GSQGSESSPGMVPLPKAEPPALFSRTAPKGMFGVHPGHSYGDPPGPSPAQLFQQSGLL YLAQELPVPSRARVPRLPEHRGSSRAEDSSEGYEEEGLEGRGEKPPSPEEQPDVTLQR LAAVLAGYGVELRQLTPEQLSTLSTLLQLLPRGAGRNMGGVVNIGADIKKTMEEQVQG GDIVEPPPPTPSLHGYPTARPTSGKAQQVPSPESFEFPKAAALSATPVLLEKKSPLGQ SQLTATGQPKDRPSAEEYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVG PALTFRIRHNEQNLSLADVTQQAELVKSELETQTGLQILQTGVGQREEAAAVLPRPAR STPPMRSVLLTLVALAGVAGLLVALAVALCVRQHARQRDKERLAALGPEGAHGDTTFE YQDLCRQHMATKSLFNRAEGPPEPSRVSSVSSQFSDAAQASPSSHSSTPSWCEEPAQA NMDISTGHMILAYMEDHLRNQDRLAKEWQALCAYQAEPNTCATAQGESNIKKNRHPDF LPYDHARIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQGPLSHTISDFWQMVWES GCTVIVMLTPLVEDGVKQCDRYWPDEGSSLYHIYEVNLVSEHIWCEDFLVRSFYLKNV QTQETRTLTQFHFLSWPAEGTPASTRPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTG TYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPGLVRSKDQFEFALTAVAEEVNAILK ALPQ" gene complement(<10014477..>10019212) /locus_tag="PAL_GLEAN10014395" mRNA complement(join(<10014477..10014835,10015663..10015733, 10015908..10016010,10016232..10016324,10017057..10017179, 10017326..10017379,10018452..10018561, 10019148..>10019212)) /locus_tag="PAL_GLEAN10014395" /product="DnaJ like protein subfamily B member 2" CDS complement(join(10014477..10014835,10015663..10015733, 10015908..10016010,10016232..10016324,10017057..10017179, 10017326..10017379,10018452..10018561,10019148..10019212)) /locus_tag="PAL_GLEAN10014395" /note="GO_function: GO:0031072 - heat shock protein binding [Evidence IEA]; GO_function: GO:0051082 - unfolded protein binding [Evidence IEA]; GO_process: GO:0006457 - protein folding [Evidence IEA]" /codon_start=1 /product="DnaJ like protein subfamily B member 2" /protein_id="ELK17179.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR003095" /db_xref="InterPro:IPR003903" /db_xref="UniProtKB/Swiss-Prot:P25686" /translation="MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPENKEFAER KFKEVAEAYEVLSDKHKREVYDRYGREGLTGAGTGPSRAEAGSGGPGFTFTFRSPEEV FREFFGSGDPFSELFDDLGPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPG AGAFRSVSTSTTFVQGRQITTRRIMENGQERVEVEEDGQLKSVTINGVPDDLALGLEL SRREQQQSVTPRSRGMQVRQTPASRPSDSDLSEDDEDLQLAMAYSLSEMEAAGKNPAG GREVQRRWLGLLKAQYHDPGMGGTHEGARGEAAKPSSAPEEKASRCLIL" gene complement(<10025950..>10035628) /locus_tag="PAL_GLEAN10014396" mRNA complement(join(<10025950..10026930,10027690..10027838, 10028175..10028397,10035587..>10035628)) /locus_tag="PAL_GLEAN10014396" /product="Tubulin alpha-1C chain" CDS complement(join(10025950..10026930,10027690..10027838, 10028175..10028397,10035587..10035628)) /locus_tag="PAL_GLEAN10014396" /note="GO_component: GO:0005874 - microtubule [Evidence IEA]; GO_component: GO:0043234 - protein complex [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005198 - structural molecule activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007017 - microtubule-based process [Evidence IEA]; GO_process: GO:0007018 - microtubule-based movement [Evidence IEA]; GO_process: GO:0051258 - protein polymerization [Evidence IEA]" /codon_start=1 /product="Tubulin alpha-1C chain" /protein_id="ELK17180.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR018316" /db_xref="UniProtKB/Swiss-Prot:P68373" /translation="MPLNLDHKLCVDMQRECISVHVGQAGVQIGNACWELYCLEHGIQ PDGQMPSDKTIGGADDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHP EQLITGKEDAANNYARGHYTIGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGS GFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD NEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYP RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRG DVVPKDVNTAIASIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGI DSMEGEEDEEGDEY" gene <10041058..>10042911 /locus_tag="PAL_GLEAN10014397" mRNA join(<10041058..10041238,10041556..10041704, 10041940..>10042911) /locus_tag="PAL_GLEAN10014397" /product="Tubulin alpha-4A chain" CDS join(10041058..10041238,10041556..10041704, 10041940..10042911) /locus_tag="PAL_GLEAN10014397" /note="GO_component: GO:0005874 - microtubule [Evidence IEA]; GO_component: GO:0043234 - protein complex [Evidence IEA]; GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005198 - structural molecule activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]; GO_process: GO:0007017 - microtubule-based process [Evidence IEA]; GO_process: GO:0007018 - microtubule-based movement [Evidence IEA]; GO_process: GO:0051258 - protein polymerization [Evidence IEA]" /codon_start=1 /product="Tubulin alpha-4A chain" /protein_id="ELK17181.1" /db_xref="InterPro:IPR000217" /db_xref="InterPro:IPR002452" /db_xref="InterPro:IPR003008" /db_xref="InterPro:IPR008280" /db_xref="InterPro:IPR018316" /db_xref="UniProtKB/Swiss-Prot:Q5XIF6" /translation="MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAG KHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDP VLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAP QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQ IVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPT GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW YVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEGEE" gene complement(<10045005..>10047580) /locus_tag="PAL_GLEAN10014398" mRNA complement(join(<10045005..10045143,10045257..10045378, 10045791..10045886,10046003..10046123,10046295..10046428, 10046699..10046918,10047495..>10047580)) /locus_tag="PAL_GLEAN10014398" /product="Serine/threonine-protein kinase 16" CDS complement(join(10045005..10045143,10045257..10045378, 10045791..10045886,10046003..10046123,10046295..10046428, 10046699..10046918,10047495..10047580)) /locus_tag="PAL_GLEAN10014398" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Serine/threonine-protein kinase 16" /protein_id="ELK17182.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:O75716" /translation="MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGH FYALKRILCHEQQDREEAQREADMHHLFHHPNILHLVAYCLRERGTKHEAWLLLPFFK RGTLWNEIERLKDKSNFLTEEQILQLLLGICRGLEAIHAQGYAHRDLKPTNILLGDGG QPVLMDLGSMNQACIHVENSRQALALQDWAAQRCTISYRAPELFSVQSHCVIDERTDV WSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSAMRQLLASMMTVD PQQRPHIPLILSQLEALQPPAPGQHTTQI" gene <10049632..>10054838 /locus_tag="PAL_GLEAN10014399" mRNA join(<10049632..10049700,10049888..10050054, 10050314..10050464,10054572..>10054838) /locus_tag="PAL_GLEAN10014399" /product="Beta-galactosidase-1-like protein" CDS join(10049632..10049700,10049888..10050054, 10050314..10050464,10054572..10054838) /locus_tag="PAL_GLEAN10014399" /note="GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="Beta-galactosidase-1-like protein" /protein_id="ELK17183.1" /db_xref="InterPro:IPR001944" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/Swiss-Prot:Q6UWU2" /translation="MDPKKPLCLPSLLLPLLTLLLPQADTRSFVVDRDHDRFLLDGVP FRYVSGSLHYFRVPRVLWADRLFKMRMSGLNAIQFYVPWNYHEPEPGVYNFNGSRDLI AFLNEATIADLLVILRPGPYICAEWEMVENEYGSYRACDFSYMRHLAGLFRALLGDKI LLFTTDGPEGLKCGSLKGLYTTVDFGPGLLSKGYERSLGKGHLFFDVYLSPLPPFCS" gene <10055232..>10055612 /locus_tag="PAL_GLEAN10014400" mRNA join(<10055232..10055268,10055467..>10055612) /locus_tag="PAL_GLEAN10014400" /product="Beta-galactosidase-1-like protein" CDS join(10055232..10055268,10055467..10055612) /locus_tag="PAL_GLEAN10014400" /note="GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="Beta-galactosidase-1-like protein" /protein_id="ELK17184.1" /db_xref="InterPro:IPR001944" /db_xref="InterPro:IPR017853" /db_xref="UniProtKB/Swiss-Prot:Q8VC60" /translation="MFHGGTNFGYWNGADEKGHFLPITTSYDYDAPISEAGDPTPKLF ALRNVISQVPYHFIKR" gene <10056653..>10057642 /locus_tag="PAL_GLEAN10014401" mRNA join(<10056653..10056823,10056993..10057208, 10057373..>10057642) /locus_tag="PAL_GLEAN10014401" /product="Beta-galactosidase-1-like protein" CDS join(10056653..10056823,10056993..10057208, 10057373..10057642) /locus_tag="PAL_GLEAN10014401" /codon_start=1 /product="Beta-galactosidase-1-like protein" /protein_id="ELK17185.1" /db_xref="InterPro:IPR008979" /db_xref="UniProtKB/Swiss-Prot:Q6UWU2" /translation="MRSSSSHRSSYPQVFQGVLERNMKYKLFLTGKVGAKLDVLLENM GRLSFGSNHSDFKGLLEPPILGQRILTQWLMFPLKVDKLVKWWFPLQLLKRSRPQTPS GPTFYSTTFKILDSGGDTFLFLPGWTKGQVWINGFNLGRYWTKWGPQQTLYVPRPLLL PRGALNKITLLELENVPSQPQIQFLDSPILNSTSHKTYIYSLSADTQSASEPMELSGH " gene complement(<10057963..>10063536) /locus_tag="PAL_GLEAN10014402" mRNA complement(join(<10057963..10058086,10058286..10058371, 10058508..10058675,10058803..10058914,10059075..10059561, 10060231..10060380,10060570..10060798,10061088..10061235, 10061326..10061438,10061906..10062033,10062156..10062258, 10062481..10062593,10063389..>10063536)) /locus_tag="PAL_GLEAN10014402" /product="Ankyrin repeat and zinc finger domain-containing protein 1" CDS complement(join(10057963..10058086,10058286..10058371, 10058508..10058675,10058803..10058914,10059075..10059561, 10060231..10060380,10060570..10060798,10061088..10061235, 10061326..10061438,10061906..10062033,10062156..10062258, 10062481..10062593,10063389..10063536)) /locus_tag="PAL_GLEAN10014402" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Ankyrin repeat and zinc finger domain-containing protein 1" /protein_id="ELK17186.1" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR003604" /db_xref="InterPro:IPR020683" /db_xref="UniProtKB/Swiss-Prot:Q9H8Y5" /translation="MSPAPAAAQAPASVSLFDLSADAPVLGGLSLVSQLPAETQAQTL RTSCPGSGERASPERTALQGPLDISGKLFCSTCDQTFQNQQEQREHYKLDWHRFNLKQ RLKNKPLLSALDFEKQSSTGDLSSISGSEDSDSASEEDLQILDEERVELEKPNRPKGF YSHRLPPEEPELLLQNLQSGGPRHCVVLMAAAGHFAGAVFQGREVMTHKTFHRYTVRA KRGTAQGLRDARGGASRSAGANLRRYNEATLYKDVRDLLAGPDWAKALGETGTILLRA PRSGRSLFFGGQGAPLQRGDPRLWDIPLATRRPTFRELQRVLHKLTTLHVHGEDPRET VTWTSSQTHWKTMRERKAAVEEERKVSSDENETLGQNEHSPKQGSGSEEEDDFQGELE LVEATIGTLDLREFEVLSKRRRRKRNKREKSRDLEAGPHMTLPQQPQEDEAFSQSAQA HAVLLEPSLDKAKVPGQSELWDVLLAACRAGDVEMLKFWLAASPTDPEVLSLLSAPLG SSGFTLLHAAAAAGRGSVVRLLLEAGADLTIQDSRARPPYTVAADKSTRNEFRRFMEK NPDAYDYSKAQVPGPLTPEMEARQAVRKREQKAARRQREEQQRKQREQEKREQEEQQR FAALSDREKRALAAERRLAAQLGAPAPLVPDSAIVNARRCWNCGTSLQGLIPFHYLDF SFCSTRCLQDHRCRAGKPSS" gene <10065786..>10072005 /locus_tag="PAL_GLEAN10014403" mRNA join(<10065786..10065886,10067414..10067575, 10067761..10067902,10068141..10068889,10068971..10069124, 10069230..10069409,10069818..10070066,10070266..10070444, 10070552..10070669,10071420..10071642,10071830..>10072005) /locus_tag="PAL_GLEAN10014403" /product="Autophagy-related protein 9A" CDS join(10065786..10065886,10067414..10067575, 10067761..10067902,10068141..10068889,10068971..10069124, 10069230..10069409,10069818..10070066,10070266..10070444, 10070552..10070669,10071420..10071642,10071830..10072005) /locus_tag="PAL_GLEAN10014403" /codon_start=1 /product="Autophagy-related protein 9A" /protein_id="ELK17187.1" /db_xref="InterPro:IPR007241" /db_xref="UniProtKB/Swiss-Prot:Q5RCS0" /translation="MAQFDTEYQRLEASYSDSPPGEEDLLVHVPEGSKQFLFVVAFTT FLVSCVDYDILFANKMVNHSLHPTEPVKVTLPDAFLPAQLCSARIQENGSLITILVIA GVFWVHRLIKFIYNICCYWEIHSFYLHALRIPMSALPYCTWQEVQARIVQTQKEHQIC IHKRELTELDIYHRILRFQNYMVALVNKSLLPLRFRLPGLGEAVFFTRGLKYNFELIL FWGPGSLFLNEWSLKAEYKRGGQRLELAQRLSNRILWIGIANFLLCPLILIWQILYAF FSYAEVLKREPGALGARCWSLYGRCYLRHFNELEHELQSRLSRGYKPASKYMNCFLSP LLTLLAKNGAFFAGSILAVLIALTIYDEDVLAVEHVLTTVTLLGVTVTVCRSFIPDQH MVFCPEQLLRVILAHIHYMPDHWQGNAHRSQTRDEFAQLFQYKAVFILEELLSPIVTP LILIFCLRPRALEIIDFFRNFTVEVVGVGDTCSFAQMDVRQHGHPQWLSAGQTEASVY QQAEDGKTELSLMHFAITNPGWQPPRESTAFLGFLKEQVQRDGAAAGLAQGGLLPENA LFTSIQSLQSESEPLSLIANVVAGSSCRGPPLPRDLQGSRHRAEVASALRSFSPLQAG QVPMGRAPSTMTGSGVDARTASSGSSVWEGQLQSLVLSEYASTEMSLHALYMHQLHKQ QAQAEPERHVWHRRESDESGESAPEEGGEGARASQPIPRSASYPCAAPRPGAPETTAL QGGFQRRYGGITDPGTVPRAPSHFSRLPLGGWAEDGQSASRHPEPVPEEGSEDELPPQ VHKVRTPGPKNN" gene <10073960..>10081253 /locus_tag="PAL_GLEAN10014404" mRNA join(<10073960..10074508,10074820..10074957, 10075193..10075379,10075575..10075676,10075853..10076036, 10076630..10076751,10077245..10077354,10077560..10077625, 10077794..10077919,10078075..10078151,10078240..10078303, 10078417..10078502,10078714..10078771,10078997..10079101, 10079519..10079693,10079823..10079935,10080723..10080817, 10080892..10080960,10081142..>10081253) /locus_tag="PAL_GLEAN10014404" /product="ATP-binding cassette sub-family B member 6, mitochondrial" CDS join(10073960..10074508,10074820..10074957, 10075193..10075379,10075575..10075676,10075853..10076036, 10076630..10076751,10077245..10077354,10077560..10077625, 10077794..10077919,10078075..10078151,10078240..10078303, 10078417..10078502,10078714..10078771,10078997..10079101, 10079519..10079693,10079823..10079935,10080723..10080817, 10080892..10080960,10081142..10081253) /locus_tag="PAL_GLEAN10014404" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016887 - ATPase activity [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO_function: GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="ATP-binding cassette sub-family B member 6, mitochondrial" /protein_id="ELK17188.1" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011527" /db_xref="InterPro:IPR017940" /db_xref="UniProtKB/Swiss-Prot:Q9NP58" /translation="MVTVGNYCEAEGPAGPAWTKGGLSPCFFFTLVPSLLMALGSLAL VLALPCKRRERPGGSDALSWRAGPRVAPYGLQLLLATLQVALPLAGLVGRMGTARGSP LPGYVLLASVLGTLASACGLGLLIEERSQARQKLAMGAWIKFSHSPGLLLFWTVAFAA ENLSLMSWNSPQWWWARADLGQQVQFSLWVVRYVVSGGLFVLGLWAPGLRPQSYTLQV NEENQDVERSQVQSTEGPPQSTWRDLGRKLRLLSSYLWPRGSPALQLVVLICLGLMGL DRGLNVLVPIFYRNIVNLLTEKAPWHSLAWTVTTYVFLKFLQGGGTGSTGFVSNLRTF LWIRVQQFTSRRMELRLFSHLHELSLRWHLGRRTGEVLRIVDRGTSSVTGLLSYLVFN IIPTLADIIIGIIYFSMFFNAWFGLIVFLCMSLYLTLTIVVTEWRTKFRRDMNAQENA TRARAVDSLLNFETVKYYNAEGYEVERYQEAIIKYQGLEWKSNASLVLLNQTQNLVIG LGLLAGSLLCAYFVSEQKLQVGDFVLFGTYIIQLYMPLNWFGTYYRMIQTNFIDMENM FDLLKEEAEVKDLPGAGPLHFQKGQIEFENVHFSYTDGRETLQDVSFTVMPGQTLALV GPSGAGKSTVLRLLFRFYDVSSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTI ANNIRYGCITAGNDEVEAAAKAAGIHDAIMSFPEGYKTQVGERGLKLSGGEKQRVAIA RTILKAPDIILLDEATSALDTSNERAIQASLAKVCANRTTIIVAHRLSTVVHADQILV IRDGCIVERGRHEALLSRGGVYADMWQLQQRGQEEASEDIKPQTKAW" assembly_gap 10079994..10080340 /estimated_length=347 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10081856..>10084154) /locus_tag="PAL_GLEAN10014405" mRNA complement(join(<10081856..10081900,10082111..10082183, 10082505..10082572,10082796..10082865,10083104..10083255, 10083387..10083518,10083734..10083828, 10084100..>10084154)) /locus_tag="PAL_GLEAN10014405" /product="AN1-type zinc finger protein 2B" CDS complement(join(10081856..10081900,10082111..10082183, 10082505..10082572,10082796..10082865,10083104..10083255, 10083387..10083518,10083734..10083828,10084100..10084154)) /locus_tag="PAL_GLEAN10014405" /note="GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="AN1-type zinc finger protein 2B" /protein_id="ELK17189.1" /db_xref="InterPro:IPR000058" /db_xref="InterPro:IPR003903" /db_xref="UniProtKB/Swiss-Prot:Q8WV99" /translation="MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHC GSAYQKDIQVPVCPLCNVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCER SGCRQREMMKLTCECCGRNFCIKHRHPLDHDCSGEGHLTSQAGSGFYYKHHPQPESDF AFIYLSQQSEDEALQRALELSLAETKPQVPSSQEEEDLALAQALSASEAEYRRQQAQS RSLKPSNCSLC" assembly_gap 10101623..10101665 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10105702..10106097 /estimated_length=396 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10107305..10107346 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10107489..>10119218 /locus_tag="PAL_GLEAN10014407" mRNA join(<10107489..10107557,10107978..10108086, 10108632..10108713,10108878..10108998,10109085..10109213, 10109759..10109820,10110178..10110295,10113883..10114006, 10114218..10114291,10114495..10114680,10115005..10115128, 10116361..10116614,10117187..10117292,10117613..10117780, 10118741..10118836,10118929..>10119218) /locus_tag="PAL_GLEAN10014407" /product="Solute carrier family 23 member 3" CDS join(10107489..10107557,10107978..10108086, 10108632..10108713,10108878..10108998,10109085..10109213, 10109759..10109820,10110178..10110295,10113883..10114006, 10114218..10114291,10114495..10114680,10115005..10115128, 10116361..10116614,10117187..10117292,10117613..10117780, 10118741..10118836,10118929..10119218) /locus_tag="PAL_GLEAN10014407" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Solute carrier family 23 member 3" /protein_id="ELK17190.1" /db_xref="InterPro:IPR006043" /db_xref="InterPro:IPR013922" /db_xref="UniProtKB/Swiss-Prot:Q6PIS1" /translation="MDLAGLLLDEEGTFSLTGFQDFSFLPGHQRLSARIRRRLYYGWD WEADCSLEELSSPMADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVY IERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAMPTLN ALERGFLSAMDWRLYTDPREIFEVLSWLESSVAEQQGRRRGWYTYTDLCVLLEQPAWQ LALGSLCQQLAKTYQDHCTYRLPLVQAPSFEFLFPALVLTSQKLPLAIQTPGNSSLML HLCEGPGCHGLELWNSSLREVSGAVVVSGLLQGTLGLLGVPGHLFLYCGPLVLAPSLI VAGFSAHKEVALFCSAHWGLALLYAYPAHGDLFSAFGLLPVTPMPLEASFNLFNSHSH PCLPALLAEWDWPLLTPRALTTGISMALATSTSSLGCYALCGWLLHLPSPPPHACSRG LSLEGLGSVLAGLLGSPMGTASSFPNVGTVSLIQAGSRRVAYLVGLLCAGLGLSPRLA QLLTTIPLPVLGGVLGVTQAVVLSTGFSSFHLADIDSGRNVFIVGFAIFMALLLPRWL REAPVLLSTGWSPLDVLLRSLLTEPIFLAGFLGFLLENTIPGTQLERGLGQGLPSPFS AQEAWMPLKSKRKAAREYDLPFPVPNLCTHIPQPLRCLCPLPEDLGNEEGGPTEPGET TDLLPGFGEPCPRSSGELRSQ" assembly_gap 10119975..10120048 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10122775..>10140411 /locus_tag="PAL_GLEAN10014408" mRNA join(<10122775..10122951,10123419..10123631, 10129765..10129903,10140209..>10140411) /locus_tag="PAL_GLEAN10014408" /product="hypothetical protein" CDS join(10122775..10122951,10123419..10123631, 10129765..10129903,10140209..10140411) /locus_tag="PAL_GLEAN10014408" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA]" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17191.1" /db_xref="InterPro:IPR015381" /db_xref="UniProtKB/Swiss-Prot:Q9H9Q4" /translation="MEELEQGLLMQPWALLQLPENSLLAKTYITKQGYALLISDLQEV WHEQVDTSVVSQRGKELNKRLTAPPEAFLCHLGDLLCPLLKGIACPGKATFSCDREAE TLILRVRSELSGLPFYWNFHCILASPSLVSQHLIRPLMGMSLALQCQVRELATLLHMK DLEIQDYQENGATLSRDDQLRKCRTVLLILLPLLNPLQCLVDRRCTVTSSCNVQVLAF EQSLTLVNVVSVYRHEEREQKHQKI" assembly_gap 10139983..10140010 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10174351..10174361 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10185221..>10188290 /locus_tag="PAL_GLEAN10014409" mRNA join(<10185221..10185328,10186933..10187050, 10187631..10187740,10188216..>10188290) /locus_tag="PAL_GLEAN10014409" /product="hypothetical protein" CDS join(10185221..10185328,10186933..10187050, 10187631..10187740,10188216..10188290) /locus_tag="PAL_GLEAN10014409" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17192.1" /db_xref="UniProtKB/Swiss-Prot:Q9H9Q4" /translation="MKGDPRDMRYEEGEELLASPLSRLSACGVEDFVWEEKLPEACSV GEGRPFVTNLQNLYMAVTRQEVQVRQKHQGTDPQTSSSTSMQGTDGQLLNQPEEPVSS APPLPVPEPTDTSGSVQRPQLSKVKRKKLRGLFG" assembly_gap 10201877..10202897 /estimated_length=1021 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10202899..>10208199 /locus_tag="PAL_GLEAN10014410" mRNA join(<10202899..10203126,10205551..10205812, 10207541..>10208199) /locus_tag="PAL_GLEAN10014410" /product="Indian hedgehog protein" CDS join(<10202899..10203126,10205551..10205812, 10207541..10208199) /locus_tag="PAL_GLEAN10014410" /note="GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]; GO_process: GO:0007154 - cell communication [Evidence IEA]; GO_process: GO:0007267 - cell-cell signaling [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]; GO_process: GO:0016539 - intein-mediated protein splicing [Evidence IEA]" /codon_start=1 /product="Indian hedgehog protein" /protein_id="ELK17193.1" /db_xref="InterPro:IPR000320" /db_xref="InterPro:IPR001657" /db_xref="InterPro:IPR001767" /db_xref="InterPro:IPR003586" /db_xref="InterPro:IPR003587" /db_xref="InterPro:IPR006141" /db_xref="InterPro:IPR009045" /db_xref="UniProtKB/Swiss-Prot:P97812" /translation="PGRVVGSRRRPPRKLVPLAYKQFSPNVPEKTLGASGRYEGKIAR SSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDRLNSLAISVMNQWPGVKLRVTE GWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWVYYESKAHVHCS VKSEHSAAAKTGGCFPAGAQVRLESGARVALSAVRPGDRVLAMGEDGNPTFSDVLIFL DREPDRLRAFQVIETQDPPRRLALTPAHLLFTANNHTEPAAHFRATFASQVQPGQYVL VAGVPGLQPARVAAVSTHIALGAYAPLTRHGTLVVEDVVASCFAAVADHHLAQWVFWP LRLFHNLAWSSWTPGEGVHWYPQLLYRLGQLLLEENNFHSLGMAVPGS" assembly_gap 10208850..10208879 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10217257..10217288 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10221671..>10250541 /locus_tag="PAL_GLEAN10014411" mRNA join(<10221671..10221843,10225032..10225134, 10225476..10225642,10225838..10226037,10226334..10226479, 10226939..10227161,10227539..10227804,10228187..10228387, 10228602..10228961,10230297..10230434,10231827..10232072, 10232647..10232871,10233631..10233789,10234095..10234245, 10235894..10236107,10236442..10236570,10241143..10241319, 10241607..10241673,10241820..10241930,10243926..10244117, 10244218..10244373,10245550..10245693,10245843..10245956, 10246151..10246261,10247754..10247956,10248357..10248485, 10249005..10249484,10250150..10250287,10250409..>10250541) /locus_tag="PAL_GLEAN10014411" /product="Coiled-coil domain-containing protein 108" CDS join(10221671..10221843,10225032..10225134, 10225476..10225642,10225838..10226037,10226334..10226479, 10226939..10227161,10227539..10227804,10228187..10228387, 10228602..10228961,10230297..10230434,10231827..10232072, 10232647..10232871,10233631..10233789,10234095..10234245, 10235894..10236107,10236442..10236570,10241143..10241319, 10241607..10241673,10241820..10241930,10243926..10244117, 10244218..10244373,10245550..10245693,10245843..10245956, 10246151..10246261,10247754..10247956,10248357..10248485, 10249005..10249484,10250150..10250287,10250409..10250541) /locus_tag="PAL_GLEAN10014411" /codon_start=1 /product="Coiled-coil domain-containing protein 108" /protein_id="ELK17194.1" /db_xref="InterPro:IPR008962" /db_xref="UniProtKB/Swiss-Prot:Q6ZU64" /translation="MDIQVCFPKKQKKVKKRVIWDIEVAEELQWKGWKLGTEITKNLV LKNLSLKIQKMKYRPPKTKFFFTVIPQPILLSPGITLTLPIIFRPLEEKEYVDQLWFE KAEGMFCVDLRATLPGHNLTCPPSLQLPTCAVGDMAEAWFSLNNVGDLPTFFTWEFSS PFQMLPTSGLLEPGQACRIKVTFQPLMAVIYNVQATCWYGERSKQKNSIQLQAAAKCA QLLVSVRQKRPEDQDVEGSQKVLHFGSVAVGCTAERQIRLYNPSVVSAPFRIEVASDM LAKDQAFSCPTSYGIVPPGEKKYVSVFFHPETLDVRTMDYLSIMPSGCAAQTLLKVIG FCRGPDVSLQHNCIDFSWVSLREHSEQPLWIENKSDCTAYFQFAIDCRESVFSIRPTF GTLVGKARMTLHCTFQPTHPIIYFRRVACLIHHQDPLFLDLIGTCHSDSTKPAILRPQ HLAWYRTHLVRGLTLYPPDILGLMLSEKKLEQDKNGALMIPMQDLEAMPAPQYPLIPP MTEYFFDGTSDLAIFPPPVSIEPVEVDFGACPSPEDPNPVPVCLVNHTKGKITVVWTC RSGCPFWVTPETCDVPPLKSMAMRLHFRPPHPNCLYAVELEAFAVYKVQQSFNNIEED CTLCPSWCLTLRAQGHSYQAALEHHIPQYSLDTPKLFPAVSPSEPSYRSLLLINKGSM LMTFNLDPKSSSEISLRPTSGLVAPGAHQIFLICTYPKGNSWKQHTFYLQFNFCPQYL KEVSMQSREEPLQLKLDTYKSVFFKPTRVGCSSTSLFTFRNPTRLPLEFEWKISQQYQ KMLAVQPARGLIQPNESLMLTWIFSPLEETKYLFRVGVWVWEAGLPPNAKPSTTTHYM IRLVGMGITSRLSAKEKELDFGNVMVNSKQSRSLVLLNEGHCTLYYHLVLEQCSPEGT DNEPLDNKVGEKQELCRVFLTAVYPLLSILDACSMGSTEGITRQHLWHLFSLDTLNSY LTRDPTPLELTYKVPTRHSTSQIPPIFTPLKLDFNFGAAPVEAPPSVVLLALKNSGVV PLDWAFLFPSDQQIDLELWAERAEFDCTELHQMRVQDNCIFSINPKAGSLSPGQEQAV EFKYSHLFVGTDRLPVLFKVSHGREILLNFIGVTVKLEQKYVHFMSTSHQFIPVPIGN PLPPRQIYELYNGGSVPVTYEIQTNVLSQVQEKNFDHPIFFCLNPQGEIQPGTTARVL WIFSPIEAKTYTVDVPIHILGWNSAIIHFQGAGYDPHVMGDTAPFHNISWDSSSTHSR LMISRQNVFLSQSHISLGNIPVQSKCRRLLFFNNISKNETIIFVWQLKPLDLGEVSVS PMRGKVAPEEMIPFVVTLKASVHASFYSMDLVCKVYRQELLKQYHKELQEWKDEKVRQ EVEFTITDRQSVKTLPPIKKQQSLCRPTSWNLKIPKEETSWPCPQPPSPGMLYLGLTA RTHATDNFLANFFSDFPRYFLHRELPKRKYAKEELKASKKKSPDKWAPISKQKKQLLI DCLNTIIRGLLEDKTFHEAIDQSLVEPVPYFCQFWNEQSARLMAQNSSLQVVPDLSPS SNIWEDREGRKELEEDKWRLEKKEEGEEEEEELEEEEEEEEDIKEEEEMGKEELEVED VMGEKEEKLTWTGIEPALQPVSQESQKWQWQQQLKVIMKEEQERNEKEAISRLPSFAN LQEALLENIIQNILVEASRGEVVLTSRPRVIALPPLSFPRTPTPDLQPAAPLGPQQIE VSRLVAPPPTDSLPYPEASPSDFLP" assembly_gap 10242702..10242719 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10251385..10251427 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10260960..>10263927 /locus_tag="PAL_GLEAN10014412" mRNA join(<10260960..10261120,10261899..10262040, 10263203..10263345,10263780..>10263927) /locus_tag="PAL_GLEAN10014412" /product="Beta-crystallin A2" CDS join(10260960..10261120,10261899..10262040, 10263203..10263345,10263780..10263927) /locus_tag="PAL_GLEAN10014412" /codon_start=1 /product="Beta-crystallin A2" /protein_id="ELK17195.1" /db_xref="InterPro:IPR001064" /db_xref="InterPro:IPR011024" /db_xref="UniProtKB/Swiss-Prot:Q9JJV1" /translation="MSSAPAPGPAPACLTLWDEEDFQGRRCRLLSDCANICERGGLRR VRSVKVENGAWVAYEYPDFQGQQFILEKGDYPRWSAWSGSGGHHSDQLLSFRPVLCAN HSDSRVTLFEGDNFQGCKFELSDDYPSLPSMGWTSKDVGSLKVSSGAWVAYQYPGYRG YQYILEHDRHGGEFRTYSEYGTQAHTGQLQSIRRVQQ" assembly_gap 10268042..10268206 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10271601..10271824 /estimated_length=224 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10286298..>10286594) /locus_tag="PAL_GLEAN10014414" mRNA complement(<10286298..>10286594) /locus_tag="PAL_GLEAN10014414" /product="Cyclin-dependent kinase 5 activator 2" CDS complement(10286298..10286594) /locus_tag="PAL_GLEAN10014414" /note="GO_component: GO:0016533 - cyclin-dependent protein kinase 5 holoenzyme complex [Evidence IEA]; GO_function: GO:0016534 - cyclin-dependent protein kinase 5 activator activity [Evidence IEA]" /codon_start=1 /product="Cyclin-dependent kinase 5 activator 2" /protein_id="ELK17196.1" /db_xref="InterPro:IPR004944" /db_xref="InterPro:IPR011028" /db_xref="UniProtKB/Swiss-Prot:O35926" /translation="MGNEISYPLKPFLVEPDKERFWQRCLRLIQRLSPQMLRLNADPH FFTQVFQDLKNEGEATAGAGGPPSGGAPAAPASSSAARDSCATGAKHWTMNLDR" assembly_gap 10286993..10287030 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10287327..10287527 /estimated_length=201 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10288084..10288246 /estimated_length=163 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10295452..10295481 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10296406..10314823 /estimated_length=18418 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10326378..10326446 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10340578..10340788 /estimated_length=211 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10341097..>10352754) /locus_tag="PAL_GLEAN10014415" mRNA complement(join(<10341097..10341594,10343984..10344363, 10351350..10351612,10352642..>10352754)) /locus_tag="PAL_GLEAN10014415" /product="Protein Wnt-10a" CDS complement(join(10341097..10341594,10343984..10344363, 10351350..10351612,10352642..10352754)) /locus_tag="PAL_GLEAN10014415" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_process: GO:0007223 - Wnt receptor signaling pathway, calcium modulating pathway [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]" /codon_start=1 /product="Protein Wnt-10a" /protein_id="ELK17197.1" /db_xref="InterPro:IPR005816" /db_xref="InterPro:IPR005817" /db_xref="InterPro:IPR013302" /db_xref="UniProtKB/Swiss-Prot:P70701" /translation="MGSTHPCPWPRLQPRPQPRPALCALLFFLLLLAAAVPRSAPNDI LGLRLPPEPVLNANTVCLTLPGLSRRQMEVCVRHPDVAASAIQGIQIAIHECQHQFRD QRWNCSSLETRNKIPYESPIFSRGFRESAFAYAIAAAGVVHAVSNACALGKLRACGCD ASRRGDEEAFRRKLHRLQLDALQRGKGLSHGVPEHPALPPISPGLQDSWEWGGCSPDV GFGERFSKDFLDSREPHRDIHARMRLHNNRVGRQAVMENMRRKCKCHGTSGSCQLKTC WQVTPEFRAVGALLRSRFHRATLIRPHNRNGGQLEPGPAGAPSPAPGIPGPRRRANSA DLVYFEKSPDFCEHEPRLDSAGTVGRLCNKSSSGPDGCGSMCCGRGHNILRQTRSERC HCRFHWCCFVVCEECRITEWVSVCK" assembly_gap 10352875..10353082 /estimated_length=208 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10359998..>10360444) /locus_tag="PAL_GLEAN10014416" mRNA complement(<10359998..>10360444) /locus_tag="PAL_GLEAN10014416" /product="Protein Wnt-6" CDS complement(10359998..10360444) /locus_tag="PAL_GLEAN10014416" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_process: GO:0007223 - Wnt receptor signaling pathway, calcium modulating pathway [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]" /codon_start=1 /product="Protein Wnt-6" /protein_id="ELK17198.1" /db_xref="InterPro:IPR005816" /db_xref="InterPro:IPR005817" /db_xref="UniProtKB/Swiss-Prot:Q9Y6F9" /translation="MRTECKCHGLSGSCALRTCWQKLPPFREVGARLLERFHGASRVM GTNDGKALLPAVLSLKPPGRADLLYAADSPDFCAPNRRTGSPGTRGRACNSSAPDLSG CDLLCCGRGHRQESVQLEENCLCRFHWCCVVQCHRCHVRKELSLCL" assembly_gap 10366293..10366348 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10367403..10367642 /estimated_length=240 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10369590..10369609 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10372499..10372989 /estimated_length=491 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10384876..>10399126 /locus_tag="PAL_GLEAN10014418" mRNA join(<10384876..10384993,10393625..10393780, 10394134..10394537,10395521..10395602,10395996..10396054, 10396173..10396218,10396421..10396475,10396671..10396797, 10396941..10397106,10398272..10398309,10398527..10398673, 10399010..>10399126) /locus_tag="PAL_GLEAN10014418" /product="5'-AMP-activated protein kinase subunit gamma-3" CDS join(10384876..10384993,10393625..10393780, 10394134..10394537,10395521..10395602,10395996..10396054, 10396173..10396218,10396421..10396475,10396671..10396797, 10396941..10397106,10398272..10398309,10398527..10398673, 10399010..10399126) /locus_tag="PAL_GLEAN10014418" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="5'-AMP-activated protein kinase subunit gamma-3" /protein_id="ELK17199.1" /db_xref="InterPro:IPR000644" /db_xref="UniProtKB/Swiss-Prot:Q9MYP4" /translation="MERMASMEDSKALGLQPSTIAMIATCGTYSKSEKELEGGEMSFL EQGDSTSWPSPAMTTSSERSHGKWGDKASRWTRQEAVEEEEEPDLGEGLQSRPAAESI GLEATFPKAIPLAQSATLAGVDAPLTEWDLLSPECTDSAAGSSMDDLELGKEFPATAI CSYELGWVEERPALCPSPQAPLPKQGWDDELQKPGAQVYMHFMQKHTCYDAMATSSKL VIFDTTLEIKKAFFALVANGVRAAPLWDNKKQSFVGMLTITDFILVLQRYYRSPLVQI YEVEEHKIETWREIYLQGCFKPLVSISPNDSLFEAVYTLIKNRIHRLPVLDPVSGNVL CIITHKRLLKFLHIFGALLPRPSFISRTIQDLGIGTFRDLAVVLETAPVLTALDIFVD RRVSALPVINETGQVVGLYSRFDVIHLAAQQTYNHLDMSVAEALRQRTLCMEGVLSCQ PEESLEEVINRIVREQVHRLVLVDETQHLLGVVSLSDILQALVLSPAGLDTLNA" assembly_gap 10398418..10398486 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10405428..>10435286) /locus_tag="PAL_GLEAN10014419" mRNA complement(join(<10405428..10405541,10405684..10405893, 10405973..10406054,10406261..10406427,10407001..10407173, 10407340..10407537,10407665..10407864,10409269..10409459, 10435251..>10435286)) /locus_tag="PAL_GLEAN10014419" /product="Sterol 26-hydroxylase, mitochondrial" CDS complement(join(10405428..10405541,10405684..10405893, 10405973..10406054,10406261..10406427,10407001..10407173, 10407340..10407537,10407665..10407864,10409269..10409459, 10435251..10435286)) /locus_tag="PAL_GLEAN10014419" /note="GO_function: GO:0004497 - monooxygenase activity [Evidence IEA]; GO_function: GO:0005506 - iron ion binding [Evidence IEA]; GO_function: GO:0009055 - electron carrier activity [Evidence IEA]; GO_function: GO:0020037 - heme binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Sterol 26-hydroxylase, mitochondrial" /protein_id="ELK17200.1" /db_xref="InterPro:IPR001128" /db_xref="InterPro:IPR002401" /db_xref="UniProtKB/Swiss-Prot:Q02318" /translation="MQGYVLHLHHLQVLNKAKYGPMWINRIGSQTYVHLASAPLLEQV MRQEGKYPIRDDMDLWKDHRDQQGLAYGPFTMQGQRWYELRQVLNQRMLKPDEAALYA DVLNEVIDSFMARLKQLRAESASGDQVPDIAHQFYHFSLEAICYILFEKRIGCLERST PQDTKAFINSVGLMFRNSLYATFLPKWTRPLLPFWKRYLDGWNTIFSFGKKMIDQKLK DIEAQLQTAGPDGVQISGYLHFLLNGRQLSPHEAVGSLSELLMAGVDTTSNTLTWALY HLSKSLKTQEALHEEVVGVVPAGQVPQHKDLAHMPLLKAVLKETLRLYPVVPNNSRII AEKEIEVGGFLFPKNTQFVFCHYALSRDPSIFSEPESFHPHRWLKSQPDNLRAQHPFG SVPFGYGIRGCLGRRIAELEMQLLLARLIQQYKVALTPETGEVKSVARVVLVPNKKVD LCFLQR" assembly_gap 10414453..10414515 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10417139..10418815 /estimated_length=1677 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10420762..10420796 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10458988..>10474887) /locus_tag="PAL_GLEAN10014421" mRNA complement(join(<10458988..10459243,10459672..10459757, 10460163..10460233,10460377..10460587,10461246..10461348, 10462630..10462767,10463205..10463339,10463668..10463766, 10464057..10464093,10465418..10465647,10466230..10466312, 10466392..10466583,10467274..10467350,10467707..10467817, 10468258..10468379,10472263..10472326,10472674..10472783, 10473899..>10474887)) /locus_tag="PAL_GLEAN10014421" /product="Tubulin polyglutamylase TTLL4" CDS complement(join(10458988..10459243,10459672..10459757, 10460163..10460233,10460377..10460587,10461246..10461348, 10462630..10462767,10463205..10463339,10463668..10463766, 10464057..10464093,10465418..10465647,10466230..10466312, 10466392..10466583,10467274..10467350,10467707..10467817, 10468258..10468379,10472263..10472326,10472674..10472783, 10473899..10474887)) /locus_tag="PAL_GLEAN10014421" /note="GO_function: GO:0004835 - tubulin-tyrosine ligase activity [Evidence IEA]; GO_process: GO:0006464 - protein modification process [Evidence IEA]" /codon_start=1 /product="Tubulin polyglutamylase TTLL4" /protein_id="ELK17201.1" /db_xref="InterPro:IPR004344" /db_xref="UniProtKB/Swiss-Prot:Q14679" /translation="MAQPMASSSTDPHLSLGAAGENSSGRSLASAISGKIPSPLPSSS SSYKPMLNNNSFMRPNSTKVPLSQATEGLKPVSSPKFQLVSWHHSGGTGDCALQPVEH KVPKSNGTELYDTLAHSTLSTPSSSDTSTTSVASPQYNQSNLAMRAKPHPCGLDGDSV SQALTREVRFTEAVRKLTARDFEKPRQGCQFDQSCLVNPSLQWDLLNRNRRWKPPVVG QQFPQEDAGADSRVLSGASDTSELDGTVFCTKRISIHLLASHANGLSCSPASGSAVDS PPLGEDKTPVLPSPSQPFGLADMATRFSSIHLGQLGKEGPKEARELDSSARDIGSATD LQLDQVEAEDLEEELVDGLEDCCSHDENEEEERGSECSSFSAVSPSESIAVISRGCME ILTKPLASEKVVRPALIYSLFPNVPPTIYFGTRDERVEKLPWEQRKLLRWKMSAVTPN IVKQTIGRSHFKISKKNDDWLGCWGHHMKSPSFRSIREHQKLNHFPGSFQIGRKDRLW RNLSRMQSRFGKKEFSFFPQSFILPQDAKLLRKAWESSSRQKWIVKPPASARGIGIQV IHKWSQLPKRRPLLVQRYLHKPYLISGSKFDLRIYVYVTSYDPLRIYLFSDGLVRFAS CKYVVVVRCHPDSFASEICFSERKGNWRTPNKNNKSNADETACQGHKWALKALWNYLS QKGVNSDAIWEKIKDVVVKTIISSEPYVTSLLKMYVRRPYSCHELFGFDIMLDENLKP WVLEVNISPSLHSNSPLDISIKGQMIRDLLNLAGFVLPNTEDIISSSSSSSSSMTSLP SSPRDKFRMAPEHFTAQKMKKAYYLAQKTPDQEFYASVLDVLTPDDVRVLVEMEDEFS RRGQFERIFPSRIASRYLRFFDQPRYFNILTTQWEQKYHGNKLKGVDLLRSWCYKGFH TGAISDSAPVWSLPTSLLTVPKGDTALNAFFKSETSKLGKHSSEEITAPSEDEITPKP KKTQAGLSSFPRKPVSSKDSEDTGKEPSLSTQLLPVIKNSGQPSRLSASPTSQSTGDC LLAAVSP" assembly_gap 10464098..10464147 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10475379..10475399 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10488936..>10492680 /locus_tag="PAL_GLEAN10014422" mRNA join(<10488936..10488994,10491857..10492265, 10492372..>10492680) /locus_tag="PAL_GLEAN10014422" /product="40S ribosomal protein S4" CDS join(10488936..10488994,10491857..10492265, 10492372..10492680) /locus_tag="PAL_GLEAN10014422" /note="GO_function: GO:0003723 - RNA binding [Evidence IEA]" /codon_start=1 /product="40S ribosomal protein S4" /protein_id="ELK17202.1" /db_xref="InterPro:IPR002942" /db_xref="InterPro:IPR013843" /db_xref="InterPro:IPR013845" /db_xref="UniProtKB/Swiss-Prot:P47961" /translation="MNFLKSYWKGHYSSPNEKESSFRAQHSHGLSMARGPKKHLKWVA APKHWMLDKLTGVFAPHPSISSHKLKESLPLIIFLRNSLKYALTGDEVKKICMQRFIK IDGQVQTDVTYPAGFMDVISIDKIRENYCLLCDTKGHFTVREITTEEAKHKLCKIDLE TGKITDFIKFDTGNLCMVTGSANLGRIGVITNRERHPGSCDVVHVKDANGNSFATRLS NIFVIGKGNNQGISLPCGKGIHLTIAKDRDKRLAAKQSSG" gene complement(<10501531..>10521941) /locus_tag="PAL_GLEAN10014423" mRNA complement(join(<10501531..10501674,10502750..10503496, 10504036..10504183,10504441..10504588,10504832..10505003, 10505423..10505497,10506461..10506571,10506762..10506825, 10507108..10507196,10507283..10507381,10507716..10507820, 10508340..10508467,10508623..10508773,10510142..10510247, 10510684..10510781,10511722..10511901,10514668..10514811, 10516329..10516428,10516634..10516821,10516988..10517157, 10517438..10517531,10518885..10519134,10519375..10519505, 10520600..10520677,10520811..10520951, 10521858..>10521941)) /locus_tag="PAL_GLEAN10014423" /product="Serine/threonine-protein kinase 36" CDS complement(join(10501531..10501674,10502750..10503496, 10504036..10504183,10504441..10504588,10504832..10505003, 10505423..10505497,10506461..10506571,10506762..10506825, 10507108..10507196,10507283..10507381,10507716..10507820, 10508340..10508467,10508623..10508773,10510142..10510247, 10510684..10510781,10511722..10511901,10514668..10514811, 10516329..10516428,10516634..10516821,10516988..10517157, 10517438..10517531,10518885..10519134,10519375..10519505, 10520600..10520677,10520811..10520951,10521858..10521941)) /locus_tag="PAL_GLEAN10014423" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Serine/threonine-protein kinase 36" /protein_id="ELK17203.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR017442" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q9NRP7" /translation="MEKYHVLEMIGEGSFGRVYKGRRKYSAQVVALKFIPKLGRSEKE LRNLQREIEIMRGLRHPNIVHMLDSFETDKEVVVVTDYAEGELFQILEDDGKLPEDQV QAIAAQLVSALYYLHSHRILHRDMKPQNILLAKGGGIKLCDFGFARAMSTNTMVLTSI KGTPLYMSPELVEERPYDHTADLWSVGCILYELAVGTPPFYTTSIFQLVNLILKDPVR WPPTISPCFKNFLQGLLTKDPRQRLTWPDLLHHPFIAGRVTIITEPAGPDLGTPFTSR LPPELQVLKDQQAHQLAPKGNRSRILRQACKRMAEEAKKKKHQNTGPALEQEDRTSKV ASGTAPLPRLWNTPQEPGLLAGIMASETKSSWAEWGAGEAPPIPRENRVTQDCERAFP ELRPEAAGQRSIDAVDLENEEPDSDDEWQHLLETTEPVPIQLKAPLTLLCNPDFCQRI QSQLHEAGAQILKGMLEGASHILPALRVLSSLLSSCSDSVPLYSFCREAGLPGLLLSL LRHSQESNSIQQQCWYGTFLRNLMAVIQAYFACTFNLERNQTGDSLQVFQEAANLFLD LLGKFLAQPDDSEQTLRRDSLMCFTVLCEAMDGNSWTISKAFYSSLLTTQRAVLDGLL HGLTVPQLPFHTPPGAPQVIQSLREQSEDLPGAISSALAAMCFAPVGLPGCWEAKEQI SRHLANQLTEDNNQLRPSLISGLQHPTLCLHLLKVLYSCCHVSERLCRLLGREPQALE SLLMLVQGKVKVVDSEESTEVTLYLLSLLVLQLQDLPSGMEKLGNEIATVFTRSHVVS LVSAAACLLGQLGQQGVTFDLQPVEWIAAATHALSAPAEVRLTPPGGCGFYDGLLVLL LQLLTQVKGSLIRDLASSEMWTALWHRFSMALRLPEEVPTQEEELLLSSPQSPEPDWT LISPQGMAALLSLAMATFTQEPQLCLSHLSQRGSILMSTLKHLLSPSFLHQLGQAPHG SEFLPVVVLSVCQILCFPFALDVDADLLVGVLADLTDSEVAAHLLQVCCHHLPLPQAE LPISLLTRLALTNPISLNQFVNTVAASPRTIISFLSVALLGDQPLLTSDLLSLLAHTA RVLSPSHLSFIQELLAGSDESYRPLRSLLGHPENSVRARTYGLLGHLLQHSMALRGAL QSQAGLLNLLLLGLGDKDPAVRRSASFAVGNAAYQAGPLGPALAAAVPGMTQLLGDPQ AGIRCNAVSALGNLGPEGLGEELLQCQVPQRLLEMACGDPQPNVKEAALIALRSLRQE PCIHQVLVSLGASEKLALLSLGNQLLPHSSPRPASAKHCRKLIHLLRPTHST" assembly_gap 10504191..10504232 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10511908..10511920 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10520526..10520554 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10522272..10522370 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10522818..>10529067 /locus_tag="PAL_GLEAN10014424" mRNA join(<10522818..10522858,10525191..10525265, 10525502..10525604,10525693..10525760,10525858..10525927, 10527103..10527174,10527273..10527416,10527767..10527859, 10528156..10528290,10528489..>10529067) /locus_tag="PAL_GLEAN10014424" /product="E3 ubiquitin-protein ligase RNF25" CDS join(10522818..10522858,10525191..10525265, 10525502..10525604,10525693..10525760,10525858..10525927, 10527103..10527174,10527273..10527416,10527767..10527859, 10528156..10528290,10528489..10529067) /locus_tag="PAL_GLEAN10014424" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase RNF25" /protein_id="ELK17204.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR006575" /db_xref="InterPro:IPR016135" /db_xref="UniProtKB/Swiss-Prot:Q96BH1" /translation="MAASASAAAGEEDWVLPSEVEVLESIYLDELQVVKGNGRSSPWE VYITLHPATAEDQDSQYVCFTLVLQVPAQYPHEVPQISIRNPRGLSDEQIHKISQALS QVAKAGLGAAMLYELIEKGKEILTDNNIPHGQCVICLYDFQENEAFTKTPCYHYFHCH CLARYIQHMEHELQVQGQEQEQERQHATTKQKAVGVQCPVCREPLVYDLASLKAAPEP QQPMELYQPNEESLRQQEERKRLYQRQQERGGIIDLEAERNRYFISLQQPPAPVEPDS AADASRGAQPPSSLATELSTSSTAQPTLSAPLPVASQYTCEKIPRAEPNQQKLGETQK AMLDPPRASRGPCRQPERKHLKGGEYNVSKGTNDTQELPPPEGPLKEPMDIKPEPHNQ GVEGPSQEKGPGNWHGPPPRRTRDCARWERSKGRTPGSSYPRLPRGRGAYRPGTRRET LSLESEDGS" assembly_gap 10524743..10524770 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10529659..>10532058) /locus_tag="PAL_GLEAN10014425" mRNA complement(join(<10529659..10529911,10530061..10530178, 10530372..10530541,10530788..10530851,10531113..10531307, 10531498..10531637,10531739..>10532058)) /locus_tag="PAL_GLEAN10014425" /product="Mitochondrial chaperone BCS1" CDS complement(join(10529659..10529911,10530061..10530178, 10530372..10530541,10530788..10530851,10531113..10531307, 10531498..10531637,10531739..10532058)) /locus_tag="PAL_GLEAN10014425" /note="GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]" /codon_start=1 /product="Mitochondrial chaperone BCS1" /protein_id="ELK17205.1" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR014851" /db_xref="UniProtKB/Swiss-Prot:Q9Y276" /translation="MPLSDFILTLKDNPYFGAGFGLVGVGTALALARKGAQLGLVAFR RHYMITLEVPARDRSYAWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPG NHFIWYQGKWIRVERSREMQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQ QEEGKTVMYTAMGSEWRPFGYPRRRRPLNSVVLEQGLADRIVRDIREFIDNPKWYTDR GIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQ SLVLLEDVDAAFLSRDLAAENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHV DRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPALAEAFAKRVLQVTTQIS PAQVQGYFMLYKNDPEGAIHNAESLKR" gene complement(<10533004..>10533207) /locus_tag="PAL_GLEAN10014426" mRNA complement(<10533004..>10533207) /locus_tag="PAL_GLEAN10014426" /product="hypothetical protein" CDS complement(10533004..10533207) /locus_tag="PAL_GLEAN10014426" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17206.1" /translation="MKELGGGAERRFPRVQRSETIEREGQRVMAVRGGVTDYFKPCCS RRELGRRGGSQGAYGRPTGTRSG" gene <10534683..>10548302 /locus_tag="PAL_GLEAN10014427" mRNA join(<10534683..10534962,10537053..10537637, 10538699..10538863,10539795..10540619,10542403..10542580, 10543352..10546274,10546841..10546946,10547833..>10548302) /locus_tag="PAL_GLEAN10014427" /product="Zinc finger protein 142" CDS join(10534683..10534962,10537053..10537637, 10538699..10538863,10539795..10540619,10542403..10542580, 10543352..10546274,10546841..10546946,10547833..10548302) /locus_tag="PAL_GLEAN10014427" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 142" /protein_id="ELK17207.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:P52746" /translation="MTDSVLDSQPANSTGEMDGLCPELLLIPPPLSNPGILEPIQSPC PSGNPSSLPADPGCLLVEATATEEDTGNMEIIVEAVAGNLSPGAPGETPGVLVKVVEV YFCERCEQSFAEPTLLALHQCTETLIQPVQGLSSPPCSVELPPSNLTLSGPLQGQSQP DSSLPCPVCRQEFAQPQALKSHFKIHRGTPDTFSCPESGCVFSAEDRKGLQHHLRQTH RVVPVPCSFRGCPLLFGSQQGMELHRQAHYPFHCNHCSFIGSNVKLFRQHRRSHRAGT QGELSAVQELLPVLKLPPGGEPSEEAGTPLPGQESAEEEDAEEEEENSILKDSQKALE KSHGAQQLEGDMASGTESLFKTHMCPECKRCFKKRTHLVEHLHLHFPDPSLQCPNCQK FFTSKSKLKTHLLRELGQKAHRCPLCHYSAVERNALNRHMASMHEDISNFYSDTYACP VCHEEFRLSQALKEHLKSHTAAAAAEPLPLGCFQEGCSYAAPNRKAFVKHLKETHGTR AVECRHHSCPMLFATAEAMEAHHKSHYAFHCPHCDFACSNKHLFRKHKKQGHPGNEEL RCTFCPFVTYNPVAYQDHVGKMHAHEKIHQCPECNFATAHKRVLIRHMLLHTGEKPHK CELCDFTCRDVSYLSKHMLTHSNAKDYMCTDCGYVTKWKHYLSVHMRKHLGDLRYQCN QCSYRCHRADQLSSHKLKHQGKSLMCEVCAFVCKRKYELQKHMASQHHSGKPAPLYPC RYCSYQSRHKQALLSHENCKHTRLREFRCALCDYRTFSNTTLFFHKRKAHGYVPGDQV WQLRYASQEPEGARQCPTPPLDPENSSQLSAQPAEQDHDPGTVVDPSLDQSLPQASEE NNSRRQDGSKVPHGDNLVGSPCPAQADEGSCTLHLEALGVELEPVAEPPIEEISETAP EEFRPLDPSGSLRLEGPDGTLTVMSTFEGAGTSGLGAEEEPILEKPVPESPNNPPSSE EPPNSWVGTFKATPPTETAPLPQFPESESLLKALRRQDKEQAEALVLEGRVQMVVIQG AGQAFRCPHCPFIARREKALSLHSRTGCQGRREPLLCPECGASFKQQRGLSTHLLKKC PVLLRKNKGLARPDSLIPLHPLPSGTQASEAAEGGRPPPAPLEVELVLPKDAPSELPG GPEEIEEPLAPLSGSVVLPAGNSSPPEKFYFEQGKFHCNSCMFLCSRLSSITSHVAEG CRGGRRGGGKRGASQTQPLLSPLSNGDSASLNSGSTECSPGDGDSAVVPKQKGARFSC PTCPFSCQQERALRTHQTRGCPLEQSRELHCGLCSFTAPAAAALKLHQKRRHPTVASA RSPRPPLQCGDCGFICKQSRCLQQHQRLKHEGVKPYQCPFCDFSTTRRYRLEAHQSRH TGVGRIPCSSCPQTFGTNSKLRLHRLRVHDKTPTHFCPLCDYSGYLRHDITRHVNSCH QGTPAFACPHCEAQFSSETALKQHALRRHPEPIAPAPGSPAEATEGPLHCSRCGLQCP SPASLRGHTCKQHPRLECGACQQAFPNRPALDEHRRQQHFSHRCQLCDFAARERVGLV KHYLEQHEETSTVTAASDGDGDAGQPSLHCPFCDFVCRHQLVLDHHVKGHGGTRLYKC TDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMRIHKEERKYLCPD CGYKCKWVNQLKYHMTKHTGLKPYQCPECEYRTNRADALRVHQETRHQEARAFMCEQC GKAFKTRFLLRTHLRKHSEAKPYVCNVCHRAFRWAAGLRHHALTHTDRHPFFCRLCSY KAKQKFQVVKHVRRHHPDQADPNQGVGKDPTTPTVHLHDVQLEDSSPPAPSAPPTGPE G" assembly_gap 10539082..10539111 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10549982..>10560991) /locus_tag="PAL_GLEAN10014428" mRNA complement(join(<10549982..10550088,10550167..10550316, 10550685..10550820,10551394..10551566,10551801..10551917, 10552275..10552431,10552577..10552672,10553720..10553911, 10555302..10555454,10556081..10556225,10557231..10557432, 10560362..10560593,10560911..>10560991)) /locus_tag="PAL_GLEAN10014428" /product="1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4" CDS complement(join(10549982..10550088,10550167..10550316, 10550685..10550820,10551394..10551566,10551801..10551917, 10552275..10552431,10552577..10552672,10553720..10553911, 10555302..10555454,10556081..10556225,10557231..10557432, 10560362..10560593,10560911..10560991)) /locus_tag="PAL_GLEAN10014428" /note="GO_function: GO:0004435 - phosphoinositide phospholipase C activity [Evidence IEA]; GO_function: GO:0004629 - phospholipase C activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]" /codon_start=1 /product="1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4" /protein_id="ELK17208.1" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR000909" /db_xref="InterPro:IPR001192" /db_xref="InterPro:IPR001711" /db_xref="InterPro:IPR008973" /db_xref="InterPro:IPR015359" /db_xref="InterPro:IPR017946" /db_xref="InterPro:IPR018029" /db_xref="UniProtKB/Swiss-Prot:P21671" /translation="MNFQEVQRLLHLMNVEMEQEYAFQLFQAADGSHSDTLEAKEFTE FYKALTKRPEVQELFENFSADGQKLTLLEFVDFLREEQKEGDHAPDLALELIDCYEPS DSGKLRHVLSMDGFLSYLCSKDGDIFKPTYLPIYQDMTQPLNHYYINSSHNTYLVGDQ LCGQSSVEGYIRALKRGCRCVEVDIWDGPNGEPIVYHGHTLTSRIPFKEVVATVAQYA FQTSDYPVILSLENHCSWEQQEIMAQHLTEILGEQLQSTTLDGLLPTQLPSPEELRRK ILVKGKKLKTLEEDLEEEEEEEELESELVGEQETELELETQFESETQELSPRSMDKKE KVVMCPLLCPPICCQIMIQAPLPKLKSPLFPKQKSAPIICPSLSALVVYMKTVSFHSF THSKEHYRFYELSSFSEAKAKRLIKEAGNEFVQHNAWQLSRVYPSGLRTDSSNYNPLE LWNAGCQMVAMNVQTAGLEMDIYDGLFRQNGGCGYVLKPEFLRDTLSSFHPERPIGPF KAKILLIQVISGQQLPKVDQTKEKAIIDPLVRVEIFGIRPDTSRQETSYVENNGFNPH WGQTLCFRVLVPELALLRFVVKDYNWKSRNDFVGQYTLPWTCMQQGYRHIHLLSKDGT SLHPASIFVYICIREELEEDES" gene complement(<10562201..>10563944) /locus_tag="PAL_GLEAN10014429" mRNA complement(join(<10562201..10562472,10563629..10563787, 10563923..>10563944)) /locus_tag="PAL_GLEAN10014429" /product="1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4" CDS complement(join(10562201..10562472,10563629..10563787, 10563923..10563944)) /locus_tag="PAL_GLEAN10014429" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4" /protein_id="ELK17209.1" /db_xref="InterPro:IPR001849" /db_xref="UniProtKB/Swiss-Prot:P21671" /translation="MASLLQGRVPVNEDVLLMQKGTLMRKVRSKIWKRLRYFRLQQDC MTVWHARQAGGKAKPSFSISDVETVRKGSESELLRSLAEEFPLEQGFTVVFHGRRSNL DLVANSAEEAQTWMQGLQLLVDFVTSMDQQERLDQYRQDGARVGFGGH" assembly_gap 10570482..10570512 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10572840..10572871 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10575543..>10596029) /locus_tag="PAL_GLEAN10014430" mRNA complement(join(<10575543..10575711,10577151..10577242, 10577457..10577555,10579256..10579365,10584090..10584199, 10586073..10586188,10587378..10587557, 10596006..>10596029)) /locus_tag="PAL_GLEAN10014430" /product="Cell differentiation protein RCD1 like protein" CDS complement(join(10575543..10575711,10577151..10577242, 10577457..10577555,10579256..10579365,10584090..10584199, 10586073..10586188,10587378..10587557,10596006..10596029)) /locus_tag="PAL_GLEAN10014430" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Cell differentiation protein RCD1 like protein" /protein_id="ELK17210.1" /db_xref="InterPro:IPR007216" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q5PQL2" /translation="MHSLATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSK KRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVAS HPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLT TEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVL QLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWL AQLVKNLQEGQVTDPRGIPLPPQ" assembly_gap 10601407..10601521 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10607749..>10665415 /locus_tag="PAL_GLEAN10014431" mRNA join(<10607749..10607799,10609350..10609521, 10610693..10610793,10613554..10613732,10614072..10614149, 10622221..10622318,10623574..10623658,10627966..10628127, 10636087..10636218,10636381..10636504,10636994..10637184, 10640060..10640177,10641441..10641520,10643715..10643879, 10645549..10645614,10648321..10648462,10650717..10650972, 10657056..10657222,10659715..10659775,10662894..10663009, 10664292..10664361,10664673..10664811,10665328..>10665415) /locus_tag="PAL_GLEAN10014431" /product="Ubiquitin carboxyl-terminal hydrolase 37" CDS join(10607749..10607799,10609350..10609521, 10610693..10610793,10613554..10613732,10614072..10614149, 10622221..10622318,10623574..10623658,10627966..10628127, 10636087..10636218,10636381..10636504,10636994..10637184, 10640060..10640177,10641441..10641520,10643715..10643879, 10645549..10645614,10648321..10648462,10650717..10650972, 10657056..10657222,10659715..10659775,10662894..10663009, 10664292..10664361,10664673..10664811,10665328..10665415) /locus_tag="PAL_GLEAN10014431" /note="GO_function: GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]" /codon_start=1 /product="Ubiquitin carboxyl-terminal hydrolase 37" /protein_id="ELK17211.1" /db_xref="InterPro:IPR001394" /db_xref="InterPro:IPR003903" /db_xref="UniProtKB/Swiss-Prot:Q86T82" /translation="MKALNNGTEWEKQEEERLSHNIKNVVLRPSGAKQSRLMLTLQDN SFLSIDKVPSKDAEEMRLFLDAVHQNRLNAAMKPSQGSGSFGAILGSRTSQKETNRQL SYSDNQASSKRGSLETKDDIPFRKVLGNPSRGSIKTAAGSGITVTRTIPSLTATSTPL RSGLLENRTEKRKRMLSSGSELNEDYPKENDSSSNNKAMTDPSRKYLTSSREKQLSLK QSEENRTSGLLPLQSSSFYGSRAGSKDYSPGSTNLDRTNVSSQTPSAKRSLGFLPQPA PLSVKKLRCNQDYTGWNKPRVPLSSHQQQQLQGFSNLGNTCYMNAILQSLFSLQSFAN DLLKQGIPWKKIPHNALIRRFAHLLVKKDICNSETKKDLLKKVKNAISATAERFSGYM QNDAHEFLSQCLDQLKEDMEKLNKTWKTEPLSGEENSPDISATRVYTCPVITNLEFEV QHSIICKACGEIIPKREQFNDLSIDLPRRKKPLPPRSIQDSLDLFFRAEELEYSCEKC GGKCALVRHKFNRLPRILILHLKRYSFNVTLSLNNKIGQQVIIPRYLTLSSHCTENTK SPFTLGWSAHMAISRPLKACQMVNSCITSPSTPSKNFSFKSKSSLALCLDSDSEDELK RSVALSQRLCDMPGCEQQQEDLEKDSKSCRLEPDKSELENSGFDGMSEEELLAAVLEI SKREASPTLSHEDDDKPTSSPDTGFAEDDIQEMPENSEPVETEKPKTITEPDPATFTE ITKDCDENKENKTPEGSQGEVDWLQQYDMEREREEQELQQALAQSLQEQEAWEQKEDD DLKRATELSLQEFNNSVLDSLGSDEDSGNEDVLDMEYTEAEAEELKRNAETGNLPHSY RLISVVSHIGSTSSSGHYISDVYDIKKQAWFTYNDLEVSKIQEASVQSDRDRSGYIFF YMHKEIFDELLETEKNSQALSLEVGKTTRQAS" assembly_gap 10644246..10644257 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10670883..>10688084) /locus_tag="PAL_GLEAN10014432" mRNA complement(join(<10670883..10670996,10674178..10674318, 10675328..10675396,10677070..10677258,10677686..10677830, 10678527..10678672,10679228..10679407,10680429..10680587, 10681188..10681325,10681414..10681514,10682049..10682202, 10682924..10683022,10683210..10683288,10683388..10683590, 10685598..10685679,10686999..10687222,10687616..10687690, 10688010..>10688084)) /locus_tag="PAL_GLEAN10014432" /product="Villin-1" CDS complement(join(10670883..10670996,10674178..10674318, 10675328..10675396,10677070..10677258,10677686..10677830, 10678527..10678672,10679228..10679407,10680429..10680587, 10681188..10681325,10681414..10681514,10682049..10682202, 10682924..10683022,10683210..10683288,10683388..10683590, 10685598..10685679,10686999..10687222,10687616..10687690, 10688010..10688084)) /locus_tag="PAL_GLEAN10014432" /note="GO_function: GO:0003779 - actin binding [Evidence IEA]; GO_process: GO:0007010 - cytoskeleton organization [Evidence IEA]" /codon_start=1 /product="Villin-1" /protein_id="ELK17212.1" /db_xref="InterPro:IPR003128" /db_xref="InterPro:IPR007122" /db_xref="InterPro:IPR007123" /db_xref="UniProtKB/Swiss-Prot:P09327" /translation="MTKLSAQVKGSLNVTTPGVQIWRIEAMQMVPVPPGTFGSFYDGD CYVVLAVHKTGSNLSYDIHYWIGQASSQDEQGAAAIYTTQMDDFLKGRAVQHREVQGN ESEAFRGYFKQGLVYGGACCRLGIQKGGVASGMKHVETNSSEVQRLLHVKSMTLAKEI RDQERGGRTYVAVVDGEDEKASPQLMEVMNHVLGKRRELKAAVPDTVVEPALKAALRL YHVSDSEGKLVVREIATRPLTQDMLSHEDCYILDQGGLKIYVWKGKNASAQERKGAMS HAQNFIKAKQYPASTQIEVQNDGSESVVFQQLFQKWTVPNQTSGLGKTYSVGSVAKVE QVKFDATSMHVQPQVAAQQKMVDDGSGEVQVWRIEDLELVPVASKWLGHFYGGDCYLL LYTYLIGEKPHYLLYIWQGSQASQDEITASAYQAVILDQKYNNEPVQIRVPMGKEPPH LMSIFKGRMVVYQGGTSRANNMEPVPPTQLFQVRGTSANNTKAFEVPAQATSLNSNDV FILKTQSCCYLWYGKGCSGDERQMAKMVADTISRTEKQVVVEGQEPAQFWIALGGKAP YASTRRLQEENMAIAPRLFECSNQTGRFLATEITDFNQDDLEEDDVFLLDVWDQVFFW IGKYANEDEKKAAATTVQEYLKTHPSGRDPETPIIVVKQGHEPPTFTGWFLAWDPFKW SNAKSYEDLKAELGNSQDWGQITAEITSPKQDVFNTNTNLNSGPLPVFPLEQLVNMPV EELPQGVDPSRKEEHLSVEDFTKVLGMTPAAFSTLPRWKQQSLKKAKGLF" gene complement(<10698698..>10702720) /locus_tag="PAL_GLEAN10014433" mRNA complement(join(<10698698..10698826,10699368..10699553, 10699682..10699774,10700396..10700452,10700540..10700644, 10701096..10701244,10702654..>10702720)) /locus_tag="PAL_GLEAN10014433" /product="Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1" CDS complement(join(10698698..10698826,10699368..10699553, 10699682..10699774,10700396..10700452,10700540..10700644, 10701096..10701244,10702654..10702720)) /locus_tag="PAL_GLEAN10014433" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1" /protein_id="ELK17213.1" /db_xref="InterPro:IPR004274" /db_xref="InterPro:IPR023214" /db_xref="UniProtKB/Swiss-Prot:Q9GZU7" /translation="MDSSAVITQISKEEARGPLRGKGDQKSAASQKPRSRGILHSLFC CVCKDDGEALPTHSGAPLLVEENGAVPKQSPVQYLLPEAKAQDSDKICVVIDLDETLV HSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYAD PVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDN AVPVASWFDNMNDTELHDLLPFFEQLSRVDDVYSVLRQPRPGS" assembly_gap 10701685..10701766 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10702760..10702879 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10704052..10704245 /estimated_length=194 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10707704..>10714876) /locus_tag="PAL_GLEAN10014434" mRNA complement(join(<10707704..10707866,10708289..10708362, 10708847..10708996,10709422..10709541,10709670..10709759, 10711140..10711298,10711940..10712095,10712245..10712312, 10712639..10712709,10713186..10713292,10714328..10714447, 10714757..>10714876)) /locus_tag="PAL_GLEAN10014434" /product="Natural resistance-associated macrophage protein 1" CDS complement(join(10707704..10707866,10708289..10708362, 10708847..10708996,10709422..10709541,10709670..10709759, 10711140..10711298,10711940..10712095,10712245..10712312, 10712639..10712709,10713186..10713292,10714328..10714447, 10714757..10714876)) /locus_tag="PAL_GLEAN10014434" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Natural resistance-associated macrophage protein 1" /protein_id="ELK17214.1" /db_xref="InterPro:IPR001046" /db_xref="UniProtKB/Swiss-Prot:Q9XT74" /translation="MFSFRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWV LLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRTLLWLTIELAIVGSDMQEV IGTAIAFSLLSAGRIPLWGGVLITIVDTFFFLFLDNYGLRKLEAFFGFLITIMALTFG YEYVVARPAQGELLRGLFLPSCPGCGQPELLQAVGIVGAIIMPHNIYLHSSLVKSREI DRTRRADVREANMYFLIEATIALSVSFFINLFVVGVFGQAFYLQTNQAAFNVCANSSL HDYAKIFPMNNHTVDVDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQF VMEGFLKLRWSRFTRVLLTRSCAILPTVLVAVFRDLKDLSGLNDLLNVLQSLLLPFAV LPILTFTSMPALMQEFANGWLSKVITSSIMALICATNLYFVISYLPSLPHPAYFSLVA LLAVAYLGLTTYLVP" assembly_gap 10708693..10708754 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10725930..>10738737) /locus_tag="PAL_GLEAN10014435" mRNA complement(join(<10725930..10726154,10726385..10726473, 10726796..10726872,10727702..10727826,10729183..10729350, 10729494..10729580,10730093..10730148,10730449..10730649, 10730988..10731077,10738644..>10738737)) /locus_tag="PAL_GLEAN10014435" /product="hypothetical protein" CDS complement(join(10725930..10726154,10726385..10726473, 10726796..10726872,10727702..10727826,10729183..10729350, 10729494..10729580,10730093..10730148,10730449..10730649, 10730988..10731077,10738644..10738737)) /locus_tag="PAL_GLEAN10014435" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17215.1" /db_xref="UniProtKB/Swiss-Prot:Q7Z7H3" /translation="MPSLPLLPPPTPSAPTVGIISQHRSGHKEEPDPRAKDQHASAAE RSPLEASAEAIHFLNSLGKEELQMLFFSETLAMVSNTGEPQGELTIEVQSGKLKDKFD VVSHYPFVHASCRGFMDKTICGNSVRGYLSWNLRTIEQHSQEFIKFHILPMERKMSLL KEEDRLVMNRSIKEGEEIKTEVTFIPWDSTVGFISEAANLLLLRVMAWRQMVPNNARF LALDTEGKLCYSTYQALGSQTIQVDRQQAEVFIVEQTVHSDQGIPTSCQFYLLSDGHL AKRIQVGSPSYCLITKMPSLREEDEMEPHPVFKKKPLMWEEDMELYSKFLDRKEQLRL SHTRYLQQHPDAQALISDFLLFLLLRQPADVVTFAAEHFGPFAMHRPPSPALRSSNRR SPFRTFHTESS" gene complement(<10738796..>10757033) /locus_tag="PAL_GLEAN10014436" mRNA complement(join(<10738796..10738969,10739253..10739368, 10740205..10740291,10741029..10741192,10741565..10741657, 10742350..10742408,10743079..10743191,10743326..10743441, 10756873..>10757033)) /locus_tag="PAL_GLEAN10014436" /product="Putative hydrolase PNKD" CDS complement(join(10738796..10738969,10739253..10739368, 10740205..10740291,10741029..10741192,10741565..10741657, 10742350..10742408,10743079..10743191,10743326..10743441, 10756873..10757033)) /locus_tag="PAL_GLEAN10014436" /note="GO_function: GO:0016787 - hydrolase activity [Evidence IEA]" /codon_start=1 /product="Putative hydrolase PNKD" /protein_id="ELK17216.1" /db_xref="InterPro:IPR001279" /db_xref="UniProtKB/Swiss-Prot:Q8N490" /translation="MAWLDCSAPFLWIASCGLLLFVLTLLLSPRSCRVRRTLRGLFMA RSKRLLFRIGYSLYTRTWLGYLFYRQQLRRARNRYPKGHSRTQPRLFNGVKVLPIPVL SDNYSYLIIDTQARLAVAVDPSDPQAVQASIEKEGVTLVGILCTHKHWDHSGGNRDLS RRHQECRVYGSPEDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLLDGEPY KGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLGLGDDTLLWPGHEYAEENLGFA GVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERSYNPFLRTHCLVLQEALGPGLG PSEDDGYSRAQLLEKLRRLKDLHKSK" assembly_gap 10739122..10739194 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10755892..10756125 /estimated_length=234 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10785752..>10792147 /locus_tag="PAL_GLEAN10014437" mRNA join(<10785752..10785953,10787357..10787451, 10788194..10788258,10788443..10788496,10788963..10789013, 10790052..10790139,10790439..10790534,10791560..10791613, 10792001..>10792147) /locus_tag="PAL_GLEAN10014437" /product="Transmembrane BAX inhibitor motif-containing protein 1" CDS join(10785752..10785953,10787357..10787451, 10788194..10788258,10788443..10788496,10788963..10789013, 10790052..10790139,10790439..10790534,10791560..10791613, 10792001..10792147) /locus_tag="PAL_GLEAN10014437" /codon_start=1 /product="Transmembrane BAX inhibitor motif-containing protein 1" /protein_id="ELK17217.1" /db_xref="InterPro:IPR006214" /db_xref="UniProtKB/Swiss-Prot:Q969X1" /translation="MSNPSAPPPYEDRNPLYPGSPPQGGYGQPSVLPGGYPAYPAYPQ PGYGHPAGYPQPMPPIHPMPMNYGPGYDGEERAVSDNFGPGDWDDRKVRHTFIRKVYT IISIQLLITVAIIAIFTFVKPVSEFVRRNVAVYYASYAVFLATYLTLACCQGPSMYQT KAVIIAMIITAVVSISVTVFCFQTKVDFTSCTGLFCVLGIVMMVTGIVTAIVLSFKYI YWLHMVYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVL QLVGSRD" gene complement(<10794406..>10796625) /locus_tag="PAL_GLEAN10014438" mRNA complement(join(<10794406..10794598,10795644..10795809, 10796559..>10796625)) /locus_tag="PAL_GLEAN10014438" /product="Putative hydrolase PNKD" CDS complement(join(10794406..10794598,10795644..10795809, 10796559..10796625)) /locus_tag="PAL_GLEAN10014438" /codon_start=1 /product="Putative hydrolase PNKD" /protein_id="ELK17218.1" /db_xref="UniProtKB/Swiss-Prot:Q69ZP3" /translation="MAAVVAATALKGRGARNARVLRGILSGATANKAQNRTRALQSHS SSECKEEPEPLSPELEYIPRKRGKNPMKAVELAWAIGFPCGILLFILTKREVDKDRLK QMKARQNMRASNTGEYESQRFRASSQHAPSPEAGSSVQT" gene <10797067..>10801630 /locus_tag="PAL_GLEAN10014439" mRNA join(<10797067..10797187,10797644..10797799, 10798488..10798607,10799129..10799268,10799526..10799670, 10799950..10800033,10800149..10800264,10800408..10800511, 10800664..10800754,10800971..10801125,10801555..>10801630) /locus_tag="PAL_GLEAN10014439" /product="Angio-associated migratory cell protein" CDS join(10797067..10797187,10797644..10797799, 10798488..10798607,10799129..10799268,10799526..10799670, 10799950..10800033,10800149..10800264,10800408..10800511, 10800664..10800754,10800971..10801125,10801555..10801630) /locus_tag="PAL_GLEAN10014439" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Angio-associated migratory cell protein" /protein_id="ELK17219.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="UniProtKB/Swiss-Prot:Q7YR70" /translation="MESESESGAAADTPPLETLSFHGDEEIIEVVELDPGPPDPDDLA QEMEDVDFEEEEEEEEGNEEGWVLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDP KTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLK VWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDCKTFQGPNCP ATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLV LTGSVDCQAKLVSATTGKVVGVFRPETVASQPNLGEGEESESNSVESLGFCSVMPLAA VGYLDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGR LLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCVQRPDR" gene complement(<10802426..>10839280) /locus_tag="PAL_GLEAN10014440" mRNA complement(join(<10802426..10803463,10814735..10814773, 10815121..10815221,10816811..10816937,10822316..10822409, 10823378..10823564,10826464..10826509,10830230..10830342, 10831367..10831401,10838764..10838919, 10839183..>10839280)) /locus_tag="PAL_GLEAN10014440" /product="Actin-related protein 2/3 complex subunit 2" CDS complement(join(10802426..10803463,10814735..10814773, 10815121..10815221,10816811..10816937,10822316..10822409, 10823378..10823564,10826464..10826509,10830230..10830342, 10831367..10831401,10838764..10838919,10839183..10839280)) /locus_tag="PAL_GLEAN10014440" /note="GO_component: GO:0005856 - cytoskeleton [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO_process: GO:0030833 - regulation of actin filament polymerization [Evidence IEA]" /codon_start=1 /product="Actin-related protein 2/3 complex subunit 2" /protein_id="ELK17220.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR007188" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:P85970" /translation="MRKRSLRLPCARLRARTRGVGAEMAPRDRASGREQQDRSLRPSL PYPPLFLLPLPGAAAAMILLEVNNRIIEETLALKFENAAAGNKPEAVEVTFADFDGVL YHISNPNGDKTKVMVSISLKFYKELQAHGADELLKRVYGSFLVNPESGYNVSLLYDLE NLPASKDSIVHQAGMLKRNCFASVFEKYFQFQEEGKEGENRAVIHYRDDETMYVESKK DRVTVVFSTVFKDDDDVVIGKVFMQEFKEGRRASHTAPQVLFSHREPPLELKDTDAAV GDNIGYITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSFAC QQLLQASPVPSPKMTPNSTQEVPSAVPEGTVELSLVLASLIVMANLLLAVGIAGNRHL RSPPAGCFFLSLLLAGLLTGLALPALPGLWSQSRRGYWSCLFFYLSPNFSFLSLLANL LLVHRERYMAVLRPLQPRGSTRLALFLTWASPLLFASLPALGWNHWAPGANCSSQAVF PAPYLYLEVYGLLLPAVGAAALLSACVLAAAHRQLQDICRLERAVCRGAPSALARALT WRQARAQAGATLLFGLCWGPYVITLLLSVLAYEQRPPLGPGTLLSLTSLGSASAAAVP VAMGLGDQRYTAPWRAAAQRWLQMLRRRASPGSPGPSTAYCTSSQSSMDLDLN" assembly_gap 10804329..10804702 /estimated_length=374 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10822949..10823007 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10842985..10843306 /estimated_length=322 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10866300..10866351 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10869406..>10870359 /locus_tag="PAL_GLEAN10014441" mRNA <10869406..>10870359 /locus_tag="PAL_GLEAN10014441" /product="High affinity interleukin-8 receptor B" CDS 10869406..10870359 /locus_tag="PAL_GLEAN10014441" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004918 - interleukin-8 receptor activity [Evidence IEA]; GO_process: GO:0006935 - chemotaxis [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="High affinity interleukin-8 receptor B" /protein_id="ELK17221.1" /db_xref="InterPro:IPR000174" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:Q28003" /translation="MDTETLNKYAVVVIYALVFLLSLLGNSLVMLVVLYSRIGRSVTD VYLAIADMLFALTLPIWAVSKVKGWIYSTILCKMVSLLKEVNFYSSILLLACISVDRY LAIVHATRTLTQKRHWVKFICLGIWALSLILSLPIFVFRKAFYPPNSSPVCYEDIGVN TTRWRMVMRVLPQTFGFLLPLLVMLFCYGFTLRTLFQAHMGQKHRAMRVIFAVVLVFL LCWLPYNLVLVADTFMRLGVIKETCERRNDIGRALDATEILGFLHSCLNPLIYAFIGQ KFRHGLLKIMAIHGLVSKEFLAKDGKPSFVGSSSGNTSTTF" assembly_gap 10891060..10892080 /estimated_length=1021 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10904501..>10916783) /locus_tag="PAL_GLEAN10014442" mRNA complement(join(<10904501..10904603,10909718..10909864, 10915780..10915886,10916607..>10916783)) /locus_tag="PAL_GLEAN10014442" /product="RUN and FYVE domain-containing protein 4" CDS complement(join(10904501..10904603,10909718..10909864, 10915780..10915886,10916607..10916783)) /locus_tag="PAL_GLEAN10014442" /codon_start=1 /product="RUN and FYVE domain-containing protein 4" /protein_id="ELK17222.1" /db_xref="UniProtKB/Swiss-Prot:Q6ZNE9" /translation="MSGSEQRWEVPSILREPRVLQSLGTREGSTTEKPQEQTGVTSVT RTEERAEVALQDVVKSLRHQLQTTKEQAQHQEQLLKEQEGELKALQEQLSRCQEERGR LQAELEKKQQEAERREAMYDEELGEQRDLVRAMKSRVLELIRVCGGLVCHVCSVDYKK RERCCLPCAQKEEAQAV" assembly_gap 10904626..10904661 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10906239..10906251 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10918928..>10920025) /locus_tag="PAL_GLEAN10014443" mRNA complement(join(<10918928..10919075,10919393..10919499, 10919840..>10920025)) /locus_tag="PAL_GLEAN10014443" /product="RUN and FYVE domain-containing protein 4" CDS complement(join(10918928..10919075,10919393..10919499, 10919840..10920025)) /locus_tag="PAL_GLEAN10014443" /codon_start=1 /product="RUN and FYVE domain-containing protein 4" /protein_id="ELK17223.1" /db_xref="InterPro:IPR004012" /db_xref="UniProtKB/Swiss-Prot:Q6ZNE9" /translation="MQGGSRREHSYTSFPSSCSQFDQKEQKSFLGPRKDYWDFLCSAL WQHRGNTEPARFVLSQDKLKTPLGKGRAFIRFCLAHGQLAESLQLCLLNPELTREWYG PRSPLVCPKLREDILDSLYALNGVAFDLDLQRPDLDGAWPMFSE" assembly_gap 10922788..10922844 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10923983..10924098 /estimated_length=116 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10934310..10934336 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <10948127..>11142817 /locus_tag="PAL_GLEAN10014444" mRNA join(<10948127..10948219,11038000..11038041, 11050568..11050609,11051412..11051462,11057109..11057158, 11059245..11059416,11061568..11061618,11062721..11062843, 11063497..11063561,11065106..11065189,11068813..11068925, 11069310..11069370,11069587..11069662,11070239..11070368, 11071777..11071842,11072950..11073066,11100441..11102021, 11113267..11113463,11114407..11114482,11118028..11118120, 11126309..11126507,11129626..11130692,11133616..11133702, 11134448..11134579,11134974..11135066,11135805..11135882, 11137712..11137783,11138037..11138205,11138936..11139004, 11139441..11139473,11142673..>11142817) /locus_tag="PAL_GLEAN10014444" /product="Tensin-1" CDS join(10948127..10948219,11038000..11038041, 11050568..11050609,11051412..11051462,11057109..11057158, 11059245..11059416,11061568..11061618,11062721..11062843, 11063497..11063561,11065106..11065189,11068813..11068925, 11069310..11069370,11069587..11069662,11070239..11070368, 11071777..11071842,11072950..11073066,11100441..11102021, 11113267..11113463,11114407..11114482,11118028..11118120, 11126309..11126507,11129626..11130692,11133616..11133702, 11134448..11134579,11134974..11135066,11135805..11135882, 11137712..11137783,11138037..11138205,11138936..11139004, 11139441..11139473,11142673..11142817) /locus_tag="PAL_GLEAN10014444" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Tensin-1" /protein_id="ELK17224.1" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR006020" /db_xref="InterPro:IPR008973" /db_xref="InterPro:IPR013625" /db_xref="InterPro:IPR014019" /db_xref="InterPro:IPR014020" /db_xref="UniProtKB/Swiss-Prot:Q9GLM4" /translation="MTRLSWCFSCVIRWGKYLFCLLPLRFCLRSQVAAPCIPPSNHEL VPINTESAPKNVVDAGEGAFRGGNTRKGLEEDGSTRVTPSVQPHPQPIRNMSVNRTME DSCELDLVYVTERIIAVSFPSTANEENFRSNLREVAQMLKSKHGGNYLLFNLSERRPD VTKLHAKVLEFGWPDLHTPALEKICSVCKAMDTWLNADPHNVVVLHNKGNRGRIGVVI AAYMHYSNISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGTIKMNNK PLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGIYNVQGDSQTSICITIEPGL LLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYG KVEFVFSYGPEKIQGMEHLENGPSVSVDYNTSDPLIRWDSYDNFNGHRDDGMEEVVGH TQGPLDGSLYAKVKKKDSLHGSSGAVNATRPVLSATPNHVEHTLSVSSDSGNSTASTK TDKTDEPAPGPSSAAAALSPEEKRELDRLLSGFGLEREKPGIMYHTQHLRSRPAGGPA VSSSGRHVVPAQVHVNGGALASERETDILDDELPNQDGHSVGSMGTLSSVDGITNTSE GGYPEALSPLTNGLDKPYPVEPMVNGGGYPYESASRAVPAHAGHVAPMRPSHSTQEGL TGYQREGPHPAWPQPVNTSHYSHDPSGMFRSQSFPEAEPQLPPAPARGGSSREAVQRG LNSWQQQQQQQQQPRPPPRQQERAHLESLGLSRPSPQLLAETPVPGLPEFPRAASQQE IEQSIETLNMLMLDLEPAAAAAPLHKSQSVPGAWPGASPLSSQPFSGSSCQSHPLTQS RSGYIPSGHSLGTPEPAPQASLESVPPGRPYSPYDYQPCPAGPNQSYRPKSPASSSTS SAFLPTTHSPSGPQQPPASLPGLTAQPQLSPKEATSDPSRTPEEEPLNLEGLVAHRVA GVQAREKQPAEPPAPLRRRAASDGQYENQSSEPSSPRSPGVRSPVQCVSPELALTIAL NPGGRPKEPHLHSYKEAFEEMEGTSPTSPPPSGVRSPPGLAKTPLSALGLKPHNPADI LLHPTGEPRSYVESVVRTAVAGPRAQDPEPKSFSAPAAQAYGHETPLRNGTLGGSFVS PSPLSTSSPILSADSTSVGSFPSGESSDQGPRTPTQPLLDSGFRSGSLSQPSPSAQRS YQSSSPLPAVGSSYSSHDYSLQQFNSPESQARAQFAVPSVHTVPGSPQARQRTVGTNT PPSPGFGRRAINPSMAAPGSPSLSHRQVMGPSGAGFHGNTVSSPQSSAATTPGSPSRG QHPGAHQASGLHGSVVTTPGSPSLGRHPGTHQGNLAPSLHGNTIASPGSPSLGRHLGG SGSVVPGSPSLDRHVAYGGYSTPEDRRPTLSRQSSASGYQAPSTPSFPVSSAYYPGLS SPATSPSPDSAAFRQGSPTPALPEKRRMSMGDRAGSLPNYATINGKVSSSPVASGMSS PSGSSTVSFSHTLPDFSKYSMPDNSPETRAKVKFVQDTSKYWYKPEISREQAIALLKD QEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIMQQNKKGDMTHELVRHFLIETGPRGVK LKGCPNEPNFGSLSALVYQHSIIPLALPCKLVIPNRDPTDESKDSSGPANSTTDLLKQ GAACNVLFVNSVDMESLTGPQAISKATSETLAADPTPAATIVHFKVSAQGITLTDNQR KLFFRRHYPLNTVTFCDLDPQERKWMKTEGGAPAKLFGFVARKQGSTTDNACHLFAEL DPNQPASAIVNFVSKVMLSAGQKR" assembly_gap 10951070..10951152 /estimated_length=83 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10953556..10953725 /estimated_length=170 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10977523..10977738 /estimated_length=216 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10993850..10994994 /estimated_length=1145 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11038393..11038465 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11092214..11092348 /estimated_length=135 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11097462..11097504 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11110328..11110341 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11117765..11117776 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11176839..11176906 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11177392..11177447 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11183004..11183069 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11195308..11195331 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11196866..11196960 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11200010..11200022 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11203917..11203942 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11243476..11243488 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11266494..11266748 /estimated_length=255 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11266999..11268131 /estimated_length=1133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11280515..11280637 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11321282..11321402 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11343001..11343012 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11378172..11378223 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11387911..11387956 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11391578..11391798 /estimated_length=221 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11407196..11407222 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11413266..11413275 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11423879..11423909 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11428334..11428511 /estimated_length=178 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11443893..11443916 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11444618..11444910 /estimated_length=293 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11465300..11465368 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11488008..11488098 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11501560..11501573 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11529459..11529474 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11559112..11559151 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11561077..11561106 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11567037..11568839 /estimated_length=1803 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11587557..11587591 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11600613..11600702 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11601531..11601570 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11635186..11635279 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11636947..11636959 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11662210..11662259 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11668665..11668683 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11688909..11688953 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11718154..11718246 /estimated_length=93 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11744723..11744860 /estimated_length=138 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11786463..11786782 /estimated_length=320 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11801477..11801541 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11805364..11805386 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11868633..11868650 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11880724..11880797 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11934471..11934503 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11934736..11934747 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11939347..11939381 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11966522..11966558 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11967884..11967951 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11976170..11976240 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11984769..11984818 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12004829..12004840 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12035300..>12048203 /locus_tag="PAL_GLEAN10014447" mRNA join(<12035300..12035633,12047183..12047412, 12047991..>12048203) /locus_tag="PAL_GLEAN10014447" /product="Insulin-like growth factor-binding protein 5" CDS join(12035300..12035633,12047183..12047412, 12047991..12048203) /locus_tag="PAL_GLEAN10014447" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005520 - insulin-like growth factor binding [Evidence IEA]; GO_process: GO:0001558 - regulation of cell growth [Evidence IEA]" /codon_start=1 /product="Insulin-like growth factor-binding protein 5" /protein_id="ELK17225.1" /db_xref="InterPro:IPR000716" /db_xref="InterPro:IPR000867" /db_xref="InterPro:IPR009030" /db_xref="InterPro:IPR012213" /db_xref="InterPro:IPR022321" /db_xref="UniProtKB/Swiss-Prot:P24594" /translation="MVLTAVLLLLAACAGPAQSLGSFVHCEPCDEKALSMCPPSPLGC ELVKEPGCGCCMTCALAEGQSCGVYTERCAQGLRCLPRQDEEKPLHALLHGRGVCLNE KSYREQVKIERDSQEREDPTTSEMAEETYSPKIFRPKHTRISELKAEAVKKDRRKKLT QSKFVGGAENTAHPRVISAPEMRQESEQGPCRRHMEASLQELKASPRMVPRAVYLPNC DRKGFYKRKQVRPHAEPLSSAGFRKRKRTRQETSKWYLAY" gene complement(<12057514..>12081727) /locus_tag="PAL_GLEAN10014449" mRNA complement(join(<12057514..12057663,12059834..12059974, 12060699..12060922,12081343..>12081727)) /locus_tag="PAL_GLEAN10014449" /product="Insulin-like growth factor-binding protein 2" CDS complement(join(12057514..12057663,12059834..12059974, 12060699..12060922,12081343..12081727)) /locus_tag="PAL_GLEAN10014449" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005520 - insulin-like growth factor binding [Evidence IEA]; GO_process: GO:0001558 - regulation of cell growth [Evidence IEA]" /codon_start=1 /product="Insulin-like growth factor-binding protein 2" /protein_id="ELK17226.1" /db_xref="InterPro:IPR000716" /db_xref="InterPro:IPR000867" /db_xref="InterPro:IPR009030" /db_xref="InterPro:IPR012210" /db_xref="InterPro:IPR022321" /db_xref="UniProtKB/Swiss-Prot:P18065" /translation="MLPRLGGPALPLLLPPLLLLLLGAGVSAEVLFRCPPCTAERVAA CETTPTRSGAPCTELVREPGCGCCSVCARLEGEACGVYTPRCAQGLRCYPHPDSELPL QALVQGAGTCEKRRDADYGASSEQVADNGDDHADGGLVENHVTTSMFGGGGNAGRKPF TSGMKELAVLREKVTEQHRQLGKGGKQHPGPEEPKKLRPPPARTPCQQELDQVLERIS TMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSRNGQRGECWCVNPNTGKPIEGA PTVRGDPECHRFYNGQQEARGVQ" assembly_gap 12079181..12079726 /estimated_length=546 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12081024..12081066 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12098263..12098329 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12105116..12105228 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12126811..12126826 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12128077..12128105 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12129618..12129628 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12139038..12139188 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12141674..12141714 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12159998..12160042 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12165944..12165956 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12183793..>12185774) /locus_tag="PAL_GLEAN10014450" mRNA complement(join(<12183793..12183856,12184998..12185080, 12185646..>12185774)) /locus_tag="PAL_GLEAN10014450" /product="60S ribosomal protein L37a" CDS complement(join(12183793..12183856,12184998..12185080, 12185646..12185774)) /locus_tag="PAL_GLEAN10014450" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="60S ribosomal protein L37a" /protein_id="ELK17227.1" /db_xref="InterPro:IPR002674" /db_xref="InterPro:IPR011332" /db_xref="UniProtKB/Swiss-Prot:P61515" /translation="MAEHTKVRIISKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKT KMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQ" assembly_gap 12186215..12186644 /estimated_length=430 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12192027..>12242160) /locus_tag="PAL_GLEAN10014451" mRNA complement(join(<12192027..12192266,12194375..12194471, 12195412..12195670,12197080..12197341,12202222..12202324, 12205008..12205078,12210538..12210756,12215361..12215501, 12222899..12222964,12226099..12226257,12227493..12227643, 12231157..12231343,12235853..12235903,12237092..12237156, 12238204..12238414,12240512..12240562, 12241335..>12242160)) /locus_tag="PAL_GLEAN10014451" /product="SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1" CDS complement(join(12192027..12192266,12194375..12194471, 12195412..12195670,12197080..12197341,12202222..12202324, 12205008..12205078,12210538..12210756,12215361..12215501, 12222899..12222964,12226099..12226257,12227493..12227643, 12231157..12231343,12235853..12235903,12237092..12237156, 12238204..12238414,12240512..12240562,12241335..12242160)) /locus_tag="PAL_GLEAN10014451" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO_process: GO:0016568 - chromatin modification [Evidence IEA]" /codon_start=1 /product="SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1" /protein_id="ELK17228.1" /db_xref="InterPro:IPR000330" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR010003" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="UniProtKB/Swiss-Prot:Q9NZC9" /translation="MSLPLTEEQRKKIEENRQKALARRAEKLLEQHQRAGLSSSIAAH PSQSKHNPSPNLPRDPSKPVSHGVSFEQQNPSSSSNGDQRPHNPHSFHLSTPDQAKGT WKWQEVMSTAYPHQSPPSQKTLTGISPPLAQSPPEVSNEWLLGPGLGQGHPQASHGTK STPFANTTHEPLAKGESSQDTPTISGQTPKDPKLEATPARPLSTLGQNVSNVLCGSGS VMPRTEGKLQQKSQASLPKTVSSQEGKCIRNGDRFQVKIGYNAELIAVFKRLPSRSFD PDTKTWNFSMTDYNALMKAAQHLSTVTLQPLEEASGVSQTSLPSAPSLAFVKGQCVLI SRARFEADIGYSEVLMALFKQMDSRNYGKLSALAWGGPQQASTSDWCLLKNVKTRKWN FLLEEHNKLIERVRCLPQVQLNPLPKTLTLAFASQLEKTSLCPTADIPEADLSRVDPK LVSSLLPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSV RFTWEQAFLQWLPSLSPENINVVVTGKDRLTAGLVNIVSFDLLSKLEKQLKTHFKVVI IDESHFLKNIKTARCRAAVPLLKIAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQF HAFGLRYCDAKRHAWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLAQLPAKQRKMVV FAPGQINAKARTSLDAAAEEMTTKGKSKGQQREALILFFNRTAEAKIPSIIEYILDLL ESGREKFLVFAHHKVVLDAITKVLEKKQVQHIRIDGSTSSADREDLCQQFQLSERHAV AVLSITAANMGLTFSSADLVVFAELFWNPGVRDTEVLKSPGMLMAAGRKELVSGRQDD RSFVDRGSWALHHVTLAVKSSEEEGLWWDLGARGCLLQALTYIQPDPRALQVLMQAED RVHRIGQSSSVGIHYLVARGTADDYLWPLIQEKIKVLGEAGVSEANFSEMTEDTDYIY KDPKQQNIYDLFQKSFEEDGSDKELLEAAESFDPGSASGTSGTSSQDIGDLPDESTSM DSPVKKRRFEFFDNWDSFTSPL" assembly_gap 12201010..12201020 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12210941..12210958 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12242625..12242655 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12259773..12259788 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12275916..>12276176 /locus_tag="PAL_GLEAN10014452" mRNA <12275916..>12276176 /locus_tag="PAL_GLEAN10014452" /product="hypothetical protein" CDS 12275916..12276176 /locus_tag="PAL_GLEAN10014452" /codon_start=1 /product="hypothetical protein" /protein_id="ELK17229.1" /translation="MKAGVAAAQDGEQQTEDEPEQPPPRRHPDADQQSPPPPQQHRRP QADPEPDEGDSRPAEEEEENKRPLTRPYLPFSWPLPLAGRDL" gene <12277303..>12367909 /locus_tag="PAL_GLEAN10014453" mRNA join(<12277303..12277821,12347874..12348029, 12353135..12353327,12367539..>12367909) /locus_tag="PAL_GLEAN10014453" /product="E3 ubiquitin-protein ligase MARCH4" CDS join(12277303..12277821,12347874..12348029, 12353135..12353327,12367539..12367909) /locus_tag="PAL_GLEAN10014453" /note="GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase MARCH4" /protein_id="ELK17230.1" /db_xref="InterPro:IPR011016" /db_xref="InterPro:IPR018957" /db_xref="UniProtKB/Swiss-Prot:Q9P2E8" /translation="MLMPLSGLLWWWCCCYCCAWYRCGLCTPDPQMLRHQGLLKCRCR MLFNDLKVFLLRRPPPAPLPMHGDPQPPGLTANNNTLPALGAGGWAGWRGPREGVGRE TPPLPPPPPFPPSVEDDWGGPATEPPALLLSSASSDDFCKGKAEDRYSLGSSLDSGMR TPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAI STKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQDLLFQI CYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGGRTN PRTSSSIQANAPSTEEEAAGTPAPEEGPARGASHHPSGPLSDHHCAYTILHILSHLRP HEQRSPQGSSRELVMRVTTV" assembly_gap 12296549..12296563 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12346191..12346291 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12369389..12369417 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12391154..>12473025) /locus_tag="PAL_GLEAN10014455" mRNA complement(join(<12391154..12391240,12397232..12397306, 12405645..12405712,12407438..12407534,12409200..12409309, 12432410..12432497,12433956..12434049,12441284..12441480, 12446597..12446730,12448987..12449077,12449943..12450080, 12453740..12453802,12456712..12456824,12459899..12460037, 12461265..12461379,12462651..12462842,12465740..12465862, 12466803..12466851,12467715..12467898,12470495..12470608, 12472954..>12473025)) /locus_tag="PAL_GLEAN10014455" /product="ATP-dependent DNA helicase 2 subunit 2" CDS complement(join(12391154..12391240,12397232..12397306, 12405645..12405712,12407438..12407534,12409200..12409309, 12432410..12432497,12433956..12434049,12441284..12441480, 12446597..12446730,12448987..12449077,12449943..12450080, 12453740..12453802,12456712..12456824,12459899..12460037, 12461265..12461379,12462651..12462842,12465740..12465862, 12466803..12466851,12467715..12467898,12470495..12470608, 12472954..12473025)) /locus_tag="PAL_GLEAN10014455" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0004003 - ATP-dependent DNA helicase activity [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]" /codon_start=1 /product="ATP-dependent DNA helicase 2 subunit 2" /protein_id="ELK17231.1" /db_xref="InterPro:IPR005160" /db_xref="InterPro:IPR005161" /db_xref="InterPro:IPR006164" /db_xref="InterPro:IPR014893" /db_xref="InterPro:IPR016194" /db_xref="UniProtKB/Swiss-Prot:P13010" /translation="MERVVQNRNHGITAVPKSEEKKIMAAVVLCMDVGFTMNNSFPGE ESPFELTKKVITMFVQRQVFAESKDEIALVLFGTDGTENALACKDQYQNITVHRHLML PDFDLLEDIESKIQTGSQQADFLDALIVCMDVIQQETVGKKFNKRHIEVFTDLSSPFS KDQLDTIIHNLRNSSISLQFFLPFPIGKEDETGDRGDGSLRSDHLGPAFPLKGITEQQ KEGIQMVKTVMMSLEGEDGLDEIYSFSESLRQLCIFKKIERTSMPWPCQLTIGSNLSI NIMAYKSILQEKVKKSWMVVDARTLRKEDIQKETVYCLNDDDETEVPKEDTIQGFRYG SDIIPFSKVDEEQMKYKSAGKCFSVLGFCRSSQVHRKYYMGNQVLKVFAAKDDEAAAV ALSSLIHALDELGMVAIVRYAYDKRANPQVGVAFPYIKDTYECLVYVQLPFMEDLRQY MFSSLHNNKKYTPTEAQLSAIDALIDSMNLIKKNEEEDTIEDLFPTTKIPNPQFQRLF QCLLHRALHPQEPLPPIQQHILNMLDTPTEVTAKCQIPLSKIKTLFPLTEVIKKKDQV TAQDIFQDNHEEGPTSKKFKTEEGEAHFSISNLADSGVTKFIVCGCILGWKFAENFRV LVRQKNATFEEVSHQLINHIEQFLDTNEIPYFMKTMDCIKAFREEAIQFSEEQRFNNF LKALREKVEIKQLNHFWEIVVQDGITLITKDEASGSSVTDEEAKKFLAPKENPSEDTA AVFEEGGDVDDLMHHSNRPSVFSDKIDSCFLGDIGEENEE" assembly_gap 12429541..12429558 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<12477200..>12480333) /locus_tag="PAL_GLEAN10014456" mRNA complement(join(<12477200..12477822,12480063..>12480333)) /locus_tag="PAL_GLEAN10014456" /product="Transmembrane protein 169" CDS complement(join(12477200..12477822,12480063..12480333)) /locus_tag="PAL_GLEAN10014456" /codon_start=1 /product="Transmembrane protein 169" /protein_id="ELK17232.1" /db_xref="UniProtKB/Swiss-Prot:Q96HH4" /translation="MEEPAPVEGQGQLPSPHQGSLRKAVAAALALDGESTMGRRKKRK KDSRPESIIIYRSESEKVDDELGESEGGEQPKEEEGDDFLDYPADDGMWNMPLDSRYV TLTGTITRGKKKGQMVDIHVTLTEKELQELTKPKELLKETTPEGRKACQMAADRGPHV VLWTLICLPVVFVLSFVVSFYYGTITWYNIFLVYNEERTFWHKISCCPCLILFYPVLI MAMASSLGLYAAVVQLSWSWGAWWQAAQDMEKGFCGWLCSKLGLEDCSPYSIVELLES DNISGNLSNKDPILEVETSTV" assembly_gap 12484740..12484749 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12487433..>12504957 /locus_tag="PAL_GLEAN10014457" mRNA join(<12487433..12487556,12491060..12491193, 12491544..12491715,12496684..12496765,12498934..12499030, 12500178..12500288,12504230..12504341,12504821..>12504957) /locus_tag="PAL_GLEAN10014457" /product="Peroxisomal trans-2-enoyl-CoA reductase" CDS join(12487433..12487556,12491060..12491193, 12491544..12491715,12496684..12496765,12498934..12499030, 12500178..12500288,12504230..12504341,12504821..12504957) /locus_tag="PAL_GLEAN10014457" /note="GO_function: GO:0016491 - oxidoreductase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Peroxisomal trans-2-enoyl-CoA reductase" /protein_id="ELK17233.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="UniProtKB/Swiss-Prot:Q9WVK3" /translation="MDASFKLKSSLKAGLLQNQVAIVTGGGTGIGKAIATELLHLGCN VVIASRKFDVLKSAADELKTLLPPTSKSQVTPLQCNIRKEEEVNNLVKSTLDIYGKID FLVNNGGGQFFSPGESITSKGWHAVIETNLSGTFYLCKAGKFYNSWMKKHGGSIVNIT MLTKNGFPGFAHSAAAREGVYNLTKTLALEWASNGVRINSIAPGVIYSQTAFDNYGYL AEDLFRKHLQRIPAKRFGVPEEVSSLVCFLLSPAASYITGQLVEVDGGLSLYGPVCEI PDHDNWPEGPGDLSVVKRTKMSLMPKTEKPSSELGEEGGVLCPQMP" gene <12539697..>12573794 /locus_tag="PAL_GLEAN10014459" mRNA join(<12539697..12539725,12540793..12540952, 12571667..12571757,12573007..12573170,12573696..>12573794) /locus_tag="PAL_GLEAN10014459" /product="Melanoregulin" CDS join(12539697..12539725,12540793..12540952, 12571667..12571757,12573007..12573170,12573696..12573794) /locus_tag="PAL_GLEAN10014459" /codon_start=1 /product="Melanoregulin" /protein_id="ELK17234.1" /db_xref="UniProtKB/Swiss-Prot:Q8N565" /translation="MLGNTAYEAIDSNPYSSFGATLARDDEKNLWSMPHDVSHTEADD DRILYNLLVVRNQQATDSEEWQKLNYDIYTLRQIRREVRNRWKHILEDLGFQKEADSL LSVTKLSTISDSKNTKKARELLLKLAEETSIFPTSWELSERYLFVVDRLIALDAAEEF FKIARRTYPKKPGVPCLADG" assembly_gap 12605155..12605191 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12641293..12641342 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12657126..12657173 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12701732..12701764 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12708222..12708276 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12726580..12726611 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12744480..12744539 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12767312..12767346 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12773445..12773522 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12786046..12786133 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12790171..12790224 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12816565..12816793 /estimated_length=229 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12832923..12833008 /estimated_length=86 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12898236..12898478 /estimated_length=243 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12899656..12899674 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12901601..12901622 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12935372..12935420 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12947572..12947609 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 12952788..12952883 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <12954212..>13018417 /locus_tag="PAL_GLEAN10014460" mRNA join(<12954212..12954359,12955332..12955460, 12956349..12956486,12957849..12957980,12958948..12959085, 12961328..12961486,12963659..12963850,12964618..12964797, 12965430..12965606,12966615..12966767,12967993..12968121, 12969137..12969280,12974658..12974779,12976610..12976790, 12976987..12977163,12977822..12977950,12978056..12978145, 12978948..12979142,12979867..12980139,12981425..12981691, 12985857..12985951,12987391..12987559,12988139..12988225, 12990296..12990487,12991811..12992083,12993505..12993687, 12995747..12995836,12997168..12997437,12998201..12998317, 12998989..12999153,12999677..12999832,13000478..13000591, 13001480..13001749,13002899..13003086,13004240..13004327, 13005220..13005396,13006187..13006276,13006506..13006685, 13007859..13007948,13008912..13009378,13010351..13010489, 13012634..13012798,13014625..13014750,13015258..13015364, 13017910..13018020,13018346..>13018417) /locus_tag="PAL_GLEAN10014460" /product="Fibronectin" CDS join(12954212..12954359,12955332..12955460, 12956349..12956486,12957849..12957980,12958948..12959085, 12961328..12961486,12963659..12963850,12964618..12964797, 12965430..12965606,12966615..12966767,12967993..12968121, 12969137..12969280,12974658..12974779,12976610..12976790, 12976987..12977163,12977822..12977950,12978056..12978145, 12978948..12979142,12979867..12980139,12981425..12981691, 12985857..12985951,12987391..12987559,12988139..12988225, 12990296..12990487,12991811..12992083,12993505..12993687, 12995747..12995836,12997168..12997437,12998201..12998317, 12998989..12999153,12999677..12999832,13000478..13000591, 13001480..13001749,13002899..13003086,13004240..13004327, 13005220..13005396,13006187..13006276,13006506..13006685, 13007859..13007948,13008912..13009378,13010351..13010489, 13012634..13012798,13014625..13014750,13015258..13015364, 13017910..13018020,13018346..13018417) /locus_tag="PAL_GLEAN10014460" /note="GO_component: GO:0005576 - extracellular region [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Fibronectin" /protein_id="ELK17235.1" /db_xref="InterPro:IPR000083" /db_xref="InterPro:IPR000562" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR013806" /db_xref="UniProtKB/Swiss-Prot:P07589" /translation="MLRGPGPGLLLLAVLSLGIAVSSTRAWRSKRQAQQIVQPPVPVA VSQNKPGCFDNGNHYQINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYT GNTYRVGDTYERPKDSMIWDCTCIGAGRRRISCTIANRCHEGGQSYKIGDTWRRPHET GGYMLECVCLGNGKGEWTCKPIAEKCFDHAGGTSYVVGETWEKPYQGWMMVDCTCLGE GSGRITCTSRNRCNDQDTKTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHASL QTTSTGSGTVADVRMAIYQPQPHPQPAPYGHCVTDSGVVYSVGMQWLKTQGNKQMLCT CLGNGVSCQETAITQTYGGNSNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNY EQDQKYSFCTDHTVLVQTRGGNSNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQ NYDADQKFGFCPMAAHEEICTTNEGVMYRIGDQWDKQHDMGHMMRCTCVGNGRGEWTC VAYSQLRDQCIVDDITYNVNDTFHKRHEEGHMLNCTCFGQGRGRWKCDPIDQCQDSET RTFYQIGDSWEKYVHSVRYQCYCYGRGIGEWHCQPLQTYSGTTGPVQVIITETPSQPN SHPIQWNAPEPSHISKYILRWKPKNSPGRWKEAVIPGHLNSYTIKGLRPNVVYEGQLI SVQQYGHKEVTRFDFTTTSTSSAVTSNTVTGETTPYSPVVATSESVTEITASSFVVSW VSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEEGE QSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPQAPITGYRIVYSPSVEGSSTEL NLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRPDKVPPPRDLQ FVEVTDVKVTIMWTPPESAVTGYRVDVIPVNLPGEHGQRLPVSRYTFAEVLGLSPGVT YHFKVYAVNHGRESKPLTAEQTTKLDAPTNLQFVNETDSTVVVTWTPPRARIAGYRLT VGLTRGGQPKQYNVGPSASKYPLRNLQPGSEYTASLVAVKGNQQSPKATGVFNTLQPT GSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPG VEYVYTISVLRDGQEKDKPIVNKVVTPLSPPTNLHLEANPDTGVLVVSWERSTTPDIS GYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESAPISDT IIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSV GYYTVTGLEPGIDYDISVTTLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTIRVTW APPPSIELTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYLVSVSSVYEQH ESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHNGGRPRE DRVPPSRNSITLTNLNPGTEYVVSIVALNGREESVPLVGQQSTVSDVPRDLEVIATTP NSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVY AVTGRGDSPASSKPVSIDYRTEIDKPSQMQVTDVQENSISVRWLPSTSPVTGYRVTAT PKNGMGPSKTKTASPDQTEMTIEGLQPTVEYVISVYAQNQNGESQPLVQTAVTNIDRP KGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELKGLR PGSEYTVSVVALHDDMESQPLIGTQSTAIPAPTNLKFTQVTPTSLTAQWTAPNVQLTG YRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVT TLENVSPPRRARVTDATETTITISWRTKTETITGFQVDALPANGQSPVQRTINPDVRS YTITGLQPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQP PRARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIQVIALKNNQKSE PLIGRKKTDELPQLVTLPHPNLQGPEILDVPSTAQKTPFITNPEYDTGNGIQLPGTSG QQPSVGQQMIFEEHGFRRTTPPTAATPVRHRPGQYSPNVNEDIQIGHVPRGDVDHHLY PHVLGLNPNASTGQEAVSQTTISWTPFQESSEYIISCHPIGIDEEPLQFRVPGTSASA TLTGLTRGATYNIIVEALKDQKRHKVREEVVTVGNSVDQGPNQPTDDSCFDPYTVSHY AIGEEWERLSETGFKLSCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQM MSCTCLGNGKGEFKCDPHETTCYDDGKTYHVGEQWQKEYLGAICSCTCFGGQRGWRCD NCRRPGAEPGHEGSTGHSYNQYSQRYHQSSNANVNCPIECFMPLDVQADKEDSRE" assembly_gap 13000776..13000825 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<13024228..>13047244) /locus_tag="PAL_GLEAN10014461" mRNA complement(join(<13024228..13024413,13024667..13024822, 13026190..13026372,13027575..13027667,13031822..13031950, 13034151..13034240,13035461..13035546,13036387..13036494, 13037312..13037437,13040790..13040946,13041277..13041428, 13041726..13041814,13043159..13043225,13043986..13044062, 13046767..13046893,13047226..>13047244)) /locus_tag="PAL_GLEAN10014461" /product="Bifunctional purine biosynthesis protein PURH" CDS complement(join(13024228..13024413,13024667..13024822, 13026190..13026372,13027575..13027667,13031822..13031950, 13034151..13034240,13035461..13035546,13036387..13036494, 13037312..13037437,13040790..13040946,13041277..13041428, 13041726..13041814,13043159..13043225,13043986..13044062, 13046767..13046893,13047226..13047244)) /locus_tag="PAL_GLEAN10014461" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_process: GO:0006188 - IMP biosynthetic process [Evidence IEA]" /codon_start=1 /product="Bifunctional purine biosynthesis protein PURH" /protein_id="ELK17236.1" /db_xref="InterPro:IPR011607" /db_xref="InterPro:IPR013982" /db_xref="InterPro:IPR016193" /db_xref="UniProtKB/Swiss-Prot:P31939" /translation="MAPGQLALFSVSDKTGLVEFAKNLTSFGLNLIASGGTAKALRDA GLAVRDVSELTGFPEMLGGRVKTLHPAVHAGILARNIPEDNADMARLDFNLIRVVVCN LYPFVKTVAFPDVTVEEAVEQIDIGGVTLLRAAAKNHARVTVVCEPEDYAAVSTEMQS SDSKDTSLETRRQLALKAFTHTAQYDEAISDYFRKQYSKGISQMPLRYGMNPHQTPAQ LYTLKPKLPITVLNGAPGFINLCDALNAWQLVKELKEALGIPAAASFKHVSPAGAAVG IPLSEDEAKVCMVHDMYRTLTPVSTAYARARGADRMSSFGDFVALSDICDVPTAKIIS REVSDGIVAPGYEEEALKILSKKKNGNYCVLQMDQSYNPDENEVRTLFGLRLSQKRNT GVIDKSLFSNVVTKNKDLPESALRDLIVATIAVKYTQSNSVCYAKNGQVIGIGAGQQS RIHCTRLAGDKANFWWLRHHPRVLSMKFKTGVKRAEISNAIDQYVTGTIGEDEDLVKW KALFEEVPELLTEAEKKEWIGKLSEVSISSDAFFPFRDNVDRAKRMGILMXXXXXXXX XXXXXXXXXXGVAYIAAPSGSAADAIVTEACNELGIILAHTNLRLFHH" assembly_gap 13024347..13024397 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13033867..13033937 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13043720..13043734 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13163418..13163561 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13170222..>13315406 /locus_tag="PAL_GLEAN10014462" mRNA join(<13170222..13170315,13208918..13209071, 13217981..13218072,13220131..13220228,13224857..13225035, 13230368..13230480,13235973..13236045,13239198..13239316, 13240363..13240469,13246126..13246382,13246475..13246587, 13247813..13247937,13249604..13249781,13252979..13253124, 13253466..13253676,13254682..13254821,13256544..13256663, 13259633..13259723,13261887..13262066,13262640..13262955, 13265734..13265848,13272061..13272390,13273487..13273556, 13273646..13273780,13274638..13274793,13275733..13275919, 13277994..13278212,13280260..13280416,13281994..13282230, 13282585..13282735,13284978..13285230,13285824..13285910, 13291592..13291679,13292311..13292416,13296352..13296406, 13296974..13297151,13298637..13298752,13300038..13300197, 13301286..13301539,13303614..13303818,13304749..13304858, 13305141..13305282,13306588..13306722,13309973..13310094, 13311203..13311308,13313678..13313815,13315299..>13315406) /locus_tag="PAL_GLEAN10014462" /product="ATP-binding cassette sub-family A member 12" CDS join(<13170222..13170315,13208918..13209071, 13217981..13218072,13220131..13220228,13224857..13225035, 13230368..13230480,13235973..13236045,13239198..13239316, 13240363..13240469,13246126..13246382,13246475..13246587, 13247813..13247937,13249604..13249781,13252979..13253124, 13253466..13253676,13254682..13254821,13256544..13256663, 13259633..13259723,13261887..13262066,13262640..13262955, 13265734..13265848,13272061..13272390,13273487..13273556, 13273646..13273780,13274638..13274793,13275733..13275919, 13277994..13278212,13280260..13280416,13281994..13282230, 13282585..13282735,13284978..13285230,13285824..13285910, 13291592..13291679,13292311..13292416,13296352..13296406, 13296974..13297151,13298637..13298752,13300038..13300197, 13301286..13301539,13303614..13303818,13304749..13304858, 13305141..13305282,13306588..13306722,13309973..13310094, 13311203..13311308,13313678..13313815,13315299..13315406) /locus_tag="PAL_GLEAN10014462" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016887 - ATPase activity [Evidence IEA]" /codon_start=1 /product="ATP-binding cassette sub-family A member 12" /protein_id="ELK17237.1" /db_xref="InterPro:IPR003439" /db_xref="UniProtKB/Swiss-Prot:Q86UK0" /translation="LWTLVLILWPVIIFIILAITRTKFPPIAKSTCYLAPRNLPSTGF FPFLQTLLCDTDSKCKDTPYGPQDLLRRKGIDDALFKDSVILRKSSNLQKDSNLSLQS TEVPERRHASPATVFPSPSSDLESTGTDTFNGSQVLARILGLEKISRDPKNQKTVFQE MVKVLTFFSQVQEQTAVWQLLSSFPNMFQNDTTLSNIFEVLQNANSALLAVQKVYPRV TTNEGFRTLHKSVKHLLYTLNSPAQGGSDNTTHMWREDGRLLSPSSLAAQLLILENFE DALLNISTDSPYIPYLACIRNVTDNLAKGSQENLRLLQSTIRFKNFFLQNGSYEDYFS SLPEVLKSKVSQLRNLTELLCESETFNSVEKMCQLSNMNFENLCEESAFHVQLLEAAE LGTEIATSILYHDSVISQKLRDLLTGDPVKINLNVDWFLEQALQMNYLENITRLMPAI ETMLHVNNSADTSGKPGQLIEMFKNVEELKEELRRMTGMSNRSIDNLLAIPIPDNRAE IISRVFWLHSCDANMTNLELEDAMKEFCSLPLPERSRQSYLIGLTLLHYLDLYNFTYK ANQKPVEKMIELFIRLKGILNQLASGSRPLLDKMRSLKQIHLPRSVPLTQAMYRSNRM NSPQGSFSTISQALCSQGITTEYLTALLPSSQRQKGNHTKDFLTYKLSKKQIAAKYGI PTHTTPFCFSLYKDIINMPAGPVIWAFLKPMLLGKILYAPYTPVTKAIMEKSNVTLRQ LAELREKSQEWMNQSPLFMNSFHLLNQTIPMLQNTLRNPFVQVFVKFSVGLDAVELLK QIDELDILRLKLENSIDLINHLNTLSSLTVNISSCVLYDRIQAAKSVDEMEREAKRLY KSNELFGSVIFKLPSNRSQHRGYDSEDVSLPPVIKYTIRMSLKTSQTTRNIRTKIWAP GPHNSPSHNQIYGRAFVYLQDNIERAIIELQTGRNSQEIAVQVQAIPYPCYMKDNFLT SVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGF LLVTIIILIIILKLGNILPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIG SLIYIIAFFPFIVLVTVDDELSYVIKVFMSLLSPTAFSYASQYIARYEEQGIGLQWEN MYSSPVQDDTTSFGWLCCLILADSFIYFLIAWYTRNVFPGTYGMAAPWYFPILPSYWK ERFGCAEVKHEKNNGLMFTNIMMQNTNPSASKTSPEYMFSSNIEPEPKDLTVGVALHG VTKIYGSKIAVDNLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGASAGTIFVYGKD IKTDLHTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPQWTKKQLHEEVKRTIILS THHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLNASTTCD TMAVTAMIQSHLPEAGLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDHGMGDLNIGC YGISDTTVEEVFLNLTKESHKNNDMSLEHLTQKKIGNSSANGISTPDDLSVNSSNFTD RDDKILTRGERLDGLGLLLKKIMAILIKRFHHTRRNWKGFIAQVILPIIFVTTAMGLG TLRNSSNSYPEIQISPSLYGTSEQTAFYANSNPSTKALVSAMWTFPGIDNMCLNISDQ YGGWSFGLPLTNDLRFDVTSVPANRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSK YDAARHGIIMYSHPYPGVQDQEQATMSSLIDILVALSILMGYSVTTASFVTYVVREHQ TKAKQLQHISGIGVTCYWVTNFIYDMVFYLVPVAFSIGIIAIFKLPAFYSENNLGAVS LLLLLFGYATFSWMYLLAGLFHETGMAFITYVCINLFFGINSIVSLSVVYFLSKEKPN DPTLELISETLKRIFLIFPQFCFGYGLIELSQQQSVLDFLKAYGVEYPSETFEMDKLG AMFVALVSQGTMFFLLRLLINEWLIKKFRLFFRKFNSSPVIETIDEDEDVRAERLRVE NGADEFDLVQLHRLTKTYQLIHKKIIAVNNISIGIPAGECFGLLGVNGAGKTTIFKML TGDIIPSSGNILIRNKTGSLAHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARIHGI PEKDIKETVHKLLRRLHLMPYKDRATSMCSYGTKRKLSTALALIGKPSILLLNSDVIL LFFSMEECEALCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHVKNTKVSMEALTK FMQLHFPKTYLKDQHLSMLEYHVPVTAGGVANIFDVLETNKTALNITNFLVSQTTLEE VFINFAKDQKSYETADTGSQDSTISVDSQDDRMES" assembly_gap 13197949..13198055 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13205255..13205325 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13257629..13257666 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13299550..13299714 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13332715..13332759 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13379300..13379472 /estimated_length=173 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <13386261..>13456081 /locus_tag="PAL_GLEAN10014463" mRNA join(<13386261..13386343,13398387..13398443, 13402946..13403094,13416005..13416966,13422960..13423040, 13424729..13424901,13437307..13437415,13443583..13443715, 13444220..13444312,13454560..13454657,13455749..>13456081) /locus_tag="PAL_GLEAN10014463" /product="BRCA1-associated RING domain protein 1" CDS join(13386261..13386343,13398387..13398443, 13402946..13403094,13416005..13416966,13422960..13423040, 13424729..13424901,13437307..13437415,13443583..13443715, 13444220..13444312,13454560..13454657,13455749..13456081) /locus_tag="PAL_GLEAN10014463" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="BRCA1-associated RING domain protein 1" /protein_id="ELK17238.1" /db_xref="InterPro:IPR001357" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR020683" /db_xref="UniProtKB/Swiss-Prot:Q99728" /translation="MEPASGGAWAHSRAALDRLEKLLRCSRCANILREPVCLGGCEHI FCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLQNLLRENELSDLKEDT SRKSSFNDAENKKNSIKMWFSPRSKKVRYVVNKISVQTQPQIINEQNAQQASMYEYVS TSPPVDVSARGKKASTRSGKKHKKKTLAQVNQEWNLEADKKDGELDSKEEFKEKLVSF CSQPSVIASPQINGEIDLLASGSVADSECFGSVTEISLPLAEQIESPEIKSKNEVVTP EKNCCENCLPSKKSVPLGRKGKRGLHRRLPNPSSKRCRSSIPSTSGHFVKQTALSENT SLPGCSLPPSSKVKVGGPLRRKNSDILDDSISPSPGLPPSTLNSPSYRRMMSSPSAVK LLPNSLMAMKRNHRGETLLHIASIKGDVPSVEYLLQNGSDPNVKDHAGWTPLHEACSH GHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLR PVDCTDSENMKSLLLLPEKNESSSTSHCSVMHTGQRRDGPLVLIGSGLSSEQQKMLSE LAAILKAKKCTEFDSTVTHVIVPGDKVQSTLKCMLGILSGCWILKFEWVKACLQRKEY EQEEKYEIPEGPQRSRLNREQLLPKLFDGCYFYFGGAFKHHPKDNLIKLVTAAGGQIL SRKPKPDSDVTQTINTVAYHAKPDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSS WFIDCVMSFELLPLDS" assembly_gap 13419707..13419775 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 13438313..13438326 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(ALWS01013698.1:1..24971,gap(480),ALWS01013699.1:1..13176, gap(63),ALWS01013700.1:1..49422,gap(32),ALWS01013701.1:1..25390, gap(48),ALWS01013702.1:1..32937,gap(795),ALWS01013703.1:1..3248, gap(23),ALWS01013704.1:1..8560,gap(76),ALWS01013705.1:1..11677, gap(592),ALWS01013706.1:1..9397,gap(19),ALWS01013707.1:1..12110, gap(26),ALWS01013708.1:1..27011,gap(292),ALWS01013709.1:1..4771, gap(71),ALWS01013710.1:1..11519,gap(10),ALWS01013711.1:1..4660, gap(395),ALWS01013712.1:1..12256,gap(10),ALWS01013713.1:1..6598, gap(62),ALWS01013714.1:1..15676,gap(356),ALWS01013715.1:1..8602, gap(44),ALWS01013716.1:1..9769,gap(31),ALWS01013717.1:1..15847, gap(39),ALWS01013718.1:1..29985,gap(68),ALWS01013719.1:1..1319, gap(12),ALWS01013720.1:1..46239,gap(70),ALWS01013721.1:1..15801, gap(339),ALWS01013722.1:1..8413,gap(27),ALWS01013723.1:1..14246, gap(30),ALWS01013724.1:1..13932,gap(61),ALWS01013725.1:1..10812, gap(71),ALWS01013726.1:1..13125,gap(47),ALWS01013727.1:1..6521, gap(318),ALWS01013728.1:1..7501,gap(17),ALWS01013729.1:1..5083, gap(294),ALWS01013730.1:1..4121,gap(68),ALWS01013731.1:1..19034, gap(417),ALWS01013732.1:1..4054,gap(35),ALWS01013733.1:1..9731, gap(223),ALWS01013734.1:1..11668,gap(1105),ALWS01013735.1:1..21663, gap(47),ALWS01013736.1:1..66373,gap(23),ALWS01013737.1:1..34829, gap(22),ALWS01013738.1:1..11633,gap(246),ALWS01013739.1:1..11205, gap(377),ALWS01013740.1:1..288,gap(50),ALWS01013741.1:1..33732, gap(43),ALWS01013742.1:1..5592,gap(11),ALWS01013743.1:1..18534, gap(497),ALWS01013744.1:1..5554,gap(41),ALWS01013745.1:1..919, gap(47),ALWS01013746.1:1..9191,gap(161),ALWS01013747.1:1..4299, gap(15),ALWS01013748.1:1..9670,gap(35),ALWS01013749.1:1..23797, gap(525),ALWS01013750.1:1..14920,gap(13),ALWS01013751.1:1..5143, gap(248),ALWS01013752.1:1..745,gap(2064),ALWS01013753.1:1..7458, gap(4145),ALWS01013754.1:1..12002,gap(13),ALWS01013755.1:1..360, gap(227),ALWS01013756.1:1..25238,gap(21),ALWS01013757.1:1..5994, gap(35),ALWS01013758.1:1..4366,gap(15),ALWS01013759.1:1..47065, gap(227),ALWS01013760.1:1..24174,gap(473),ALWS01013761.1:1..11643, gap(128),ALWS01013762.1:1..40626,gap(17),ALWS01013763.1:1..28869, gap(17),ALWS01013764.1:1..6786,gap(934),ALWS01013765.1:1..8049, gap(37),ALWS01013766.1:1..18327,gap(68),ALWS01013767.1:1..604, gap(53),ALWS01013768.1:1..6407,gap(703),ALWS01013769.1:1..28832, gap(184),ALWS01013770.1:1..9803,gap(42),ALWS01013771.1:1..19348, gap(86),ALWS01013772.1:1..7827,gap(38),ALWS01013773.1:1..25002, gap(285),ALWS01013774.1:1..29072,gap(203),ALWS01013775.1:1..6406, gap(260),ALWS01013776.1:1..13378,gap(36),ALWS01013777.1:1..7040, gap(20),ALWS01013778.1:1..1720,gap(118),ALWS01013779.1:1..10188, gap(933),ALWS01013780.1:1..28006,gap(220),ALWS01013781.1:1..2089, gap(250),ALWS01013782.1:1..658,gap(17),ALWS01013783.1:1..324, gap(37),ALWS01013784.1:1..941,gap(48),ALWS01013785.1:1..32605, gap(113),ALWS01013786.1:1..23939,gap(30),ALWS01013787.1:1..686, gap(226),ALWS01013788.1:1..14136,gap(298),ALWS01013789.1:1..16559, gap(294),ALWS01013790.1:1..13705,gap(43),ALWS01013791.1:1..24793, gap(2029),ALWS01013792.1:1..6000,gap(475),ALWS01013793.1:1..15523, gap(50),ALWS01013794.1:1..290,gap(49),ALWS01013795.1:1..4297, gap(41),ALWS01013796.1:1..2425,gap(41),ALWS01013797.1:1..1918, gap(354),ALWS01013798.1:1..25516,gap(10),ALWS01013799.1:1..16618, gap(35),ALWS01013800.1:1..4315,gap(63),ALWS01013801.1:1..27755, gap(967),ALWS01013802.1:1..11877,gap(42),ALWS01013803.1:1..3773, gap(240),ALWS01013804.1:1..15183,gap(68),ALWS01013805.1:1..1413, gap(4221),ALWS01013806.1:1..4710,gap(4715),ALWS01013807.1:1..4005, gap(4157),ALWS01013808.1:1..602,gap(36),ALWS01013809.1:1..4477, gap(36),ALWS01013810.1:1..18369,gap(52),ALWS01013811.1:1..8916, gap(209),ALWS01013812.1:1..13174,gap(2708),ALWS01013813.1:1..82340, gap(43),ALWS01013814.1:1..1174,gap(475),ALWS01013815.1:1..2684, gap(44),ALWS01013816.1:1..26570,gap(282),ALWS01013817.1:1..5407, gap(20),ALWS01013818.1:1..754,gap(64),ALWS01013819.1:1..12772, gap(26),ALWS01013820.1:1..9260,gap(67),ALWS01013821.1:1..12319, gap(52),ALWS01013822.1:1..1916,gap(54),ALWS01013823.1:1..32513, gap(204),ALWS01013824.1:1..407,gap(76),ALWS01013825.1:1..10094, gap(109),ALWS01013826.1:1..2027,gap(199),ALWS01013827.1:1..5607, gap(64),ALWS01013828.1:1..3531,gap(382),ALWS01013829.1:1..52006, gap(93),ALWS01013830.1:1..1839,gap(10),ALWS01013831.1:1..11728, gap(39),ALWS01013832.1:1..4532,gap(753),ALWS01013833.1:1..27418, gap(541),ALWS01013834.1:1..14738,gap(20),ALWS01013835.1:1..22205, gap(46),ALWS01013836.1:1..20172,gap(49),ALWS01013837.1:1..3442, gap(36),ALWS01013838.1:1..11088,gap(17),ALWS01013839.1:1..6241, gap(47),ALWS01013840.1:1..16880,gap(21),ALWS01013841.1:1..15552, gap(52),ALWS01013842.1:1..24767,gap(372),ALWS01013843.1:1..4499, gap(954),ALWS01013844.1:1..28180,gap(325),ALWS01013845.1:1..53979, gap(1626),ALWS01013846.1:1..32448,gap(3096),ALWS01013847.1:1..5714, gap(117),ALWS01013848.1:1..3829,gap(6977),ALWS01013849.1:1..9475, gap(70),ALWS01013850.1:1..22218,gap(3320),ALWS01013851.1:1..13081, 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gap(24),ALWS01014302.1:1..1534,gap(95),ALWS01014303.1:1..3049, gap(13),ALWS01014304.1:1..3894,gap(26),ALWS01014305.1:1..39533, gap(13),ALWS01014306.1:1..23005,gap(255),ALWS01014307.1:1..250, gap(1133),ALWS01014308.1:1..12383,gap(123),ALWS01014309.1:1..40644, gap(121),ALWS01014310.1:1..21598,gap(12),ALWS01014311.1:1..35159, gap(52),ALWS01014312.1:1..9687,gap(46),ALWS01014313.1:1..3621, gap(221),ALWS01014314.1:1..15397,gap(27),ALWS01014315.1:1..6043, gap(10),ALWS01014316.1:1..10603,gap(31),ALWS01014317.1:1..4424, gap(178),ALWS01014318.1:1..15381,gap(24),ALWS01014319.1:1..701, gap(293),ALWS01014320.1:1..20389,gap(69),ALWS01014321.1:1..22639, gap(91),ALWS01014322.1:1..13461,gap(14),ALWS01014323.1:1..27885, gap(16),ALWS01014324.1:1..29637,gap(40),ALWS01014325.1:1..1925, gap(30),ALWS01014326.1:1..5930,gap(1803),ALWS01014327.1:1..18717, gap(35),ALWS01014328.1:1..13021,gap(90),ALWS01014329.1:1..828, gap(40),ALWS01014330.1:1..33615,gap(94),ALWS01014331.1:1..1667, 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gap(430),ALWS01014362.1:1..14365,gap(11),ALWS01014363.1:1..9920, gap(18),ALWS01014364.1:1..31666,gap(31),ALWS01014365.1:1..17117, gap(16),ALWS01014366.1:1..36760,gap(15),ALWS01014367.1:1..49627, gap(101),ALWS01014368.1:1..23097,gap(29),ALWS01014369.1:1..60123, gap(18),ALWS01014370.1:1..55181,gap(10),ALWS01014371.1:1..120405, gap(37),ALWS01014372.1:1..36101,gap(50),ALWS01014373.1:1..15783, gap(48),ALWS01014374.1:1..44558,gap(33),ALWS01014375.1:1..6457, gap(55),ALWS01014376.1:1..18303,gap(32),ALWS01014377.1:1..17868, gap(60),ALWS01014378.1:1..22772,gap(35),ALWS01014379.1:1..6098, gap(78),ALWS01014380.1:1..12523,gap(88),ALWS01014381.1:1..4037, gap(54),ALWS01014382.1:1..26340,gap(229),ALWS01014383.1:1..16129, gap(86),ALWS01014384.1:1..65227,gap(243),ALWS01014385.1:1..1177, gap(19),ALWS01014386.1:1..1926,gap(22),ALWS01014387.1:1..33749, gap(49),ALWS01014388.1:1..12151,gap(38),ALWS01014389.1:1..5178, gap(96),ALWS01014390.1:1..47892,gap(50),ALWS01014391.1:1..23521, gap(51),ALWS01014392.1:1..9469,gap(71),ALWS01014393.1:1..9782, gap(15),ALWS01014394.1:1..119683,gap(144),ALWS01014395.1:1..34387, gap(107),ALWS01014396.1:1..7199,gap(71),ALWS01014397.1:1..52303, gap(38),ALWS01014398.1:1..41883,gap(165),ALWS01014399.1:1..33000, gap(45),ALWS01014400.1:1..46540,gap(173),ALWS01014401.1:1..40234, gap(69),ALWS01014402.1:1..18537,gap(14),ALWS01014403.1:1..18729) //