LOCUS KB030337 11014186 bp DNA linear CON 19-MAR-2015 DEFINITION Pteropus alecto unplaced genomic scaffold scaffold270, whole genome shotgun sequence. ACCESSION KB030337 ALWS01000000 VERSION KB030337.1 DBLINK BioProject: PRJNA171993 BioSample: SAMN01103203 KEYWORDS WGS. SOURCE Pteropus alecto (black flying fox) ORGANISM Pteropus alecto Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus. REFERENCE 1 (bases 1 to 11014186) AUTHORS Zhang,G., Cowled,C., Shi,Z., Huang,Z., Bishop-Lilly,K.A., Fang,X., Wynne,J.W., Xiong,Z., Baker,M.L., Zhao,W., Tachedjian,M., Zhu,Y., Zhou,P., Jiang,X., Ng,J., Yang,L., Wu,L., Xiao,J., Feng,Y., Chen,Y., Sun,X., Zhang,Y., Marsh,G.A., Crameri,G., Broder,C.C., Frey,K.G., Wang,L.F. and Wang,J. TITLE Comparative analysis of bat genomes provides insight into the evolution of flight and immunity JOURNAL Science 339 (6118), 456-460 (2013) PUBMED 23258410 REFERENCE 2 (bases 1 to 11014186) AUTHORS Zhang,G., Cowled,C. and Wang,L. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.06 Genome Coverage :: 110x Sequencing Technology :: Illumina HighSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..11014186 /organism="Pteropus alecto" /mol_type="genomic DNA" /submitter_seqid="scaffold270" /db_xref="taxon:9402" /chromosome="Unknown" /sex="male" /tissue_type="kidney" /geo_loc_name="Australia: Anglican Church Grammer School, East Brisbane" /collection_date="Nov-2008" assembly_gap 23335..23378 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 24663..24680 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 68139..77402 /estimated_length=9264 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 107962..108046 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 143456..143477 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 165539..165648 /estimated_length=110 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 168081..168105 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 215063..215085 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 219551..219622 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 224873..224883 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 267615..267646 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <301405..>348695 /locus_tag="PAL_GLEAN10013341" mRNA join(<301405..301533,305138..305357,311887..311951, 313200..313287,313746..313928,319178..319305, 320743..320875,324470..324582,326719..326854, 329633..329761,331632..331670,331961..332078, 348608..>348695) /locus_tag="PAL_GLEAN10013341" /product="CD166 antigen" CDS join(<301405..301533,305138..305357,311887..311951, 313200..313287,313746..313928,319178..319305, 320743..320875,324470..324582,326719..326854, 329633..329761,331632..331670,331961..332078, 348608..348695) /locus_tag="PAL_GLEAN10013341" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="CD166 antigen" /protein_id="ELK18136.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013162" /db_xref="UniProtKB/Swiss-Prot:Q13740" /translation="LSHSSFFPQGLGWYTVNSAYGDTIVMPCRVDVPQNLMFGKWKYE KADGSPVFIAFRSSTKKSVHYDDVPEYKDRLSLSENYTLSISNARISDKKRFVCMLVT EDNVFEAPTIVKVFKQPSKPEIVSKAPFLETEQLKKLGDCVSKDSYPPGNITWYRGGK VLQSLEGEVVIIFTKKMDPVTQLYTMTSSLEYKTTKADIKMPFTCSVSYYGPSGQKTV HSEQAVFDIYYPTEQVTIQVLPPKNAIKEGDNITLKCLGNGNPPPEEFLFYLPGQPEG IRSSNTYTLTDVRRNATGDYKCSLIDKKSMIASTTITVHYLDLSLNPSGEVTKQIGDA LPVSCTISASRNATVVWMKDNTRLKSSPSFSSLHYQDAGNYVCETALQEVEGLKKRES LTLIVEEESPYINGRYYSKIIISPEENVTLTCTAENQLERTVNSLNVSAISIPEHDEA DEISDENREKVNDQAKLIVGIVVGLLLAALVAGVVYWLYMKKSKTASKHVNKDLGNLE ENKKLEENNHKTEA" assembly_gap 303265..303301 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 321580..321594 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 329575..329587 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 336326..336370 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 382460..382484 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 384352..384443 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 392378..392390 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 394712..394726 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<420270..>619120) /locus_tag="PAL_GLEAN10013342" mRNA complement(join(<420270..420529,426090..426296, 436481..436600,448785..448925,451418..451549, 451664..451761,455035..455181,466030..466124, 472982..473347,474600..474785,493584..493787, 504443..504574,507208..507295,510479..510616, 513838..513959,519273..519429,536289..536435, 606269..606519,618953..>619120)) /locus_tag="PAL_GLEAN10013342" /product="E3 ubiquitin-protein ligase CBL-B" CDS complement(join(420270..420529,426090..426296, 436481..436600,448785..448925,451418..451549, 451664..451761,455035..455181,466030..466124, 472982..473347,474600..474785,493584..493787, 504443..504574,507208..507295,510479..510616, 513838..513959,519273..519429,536289..536435, 606269..606519,618953..619120)) /locus_tag="PAL_GLEAN10013342" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0007166 - cell surface receptor linked signaling pathway [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase CBL-B" /protein_id="ELK18137.1" /db_xref="InterPro:IPR000449" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR003153" /db_xref="InterPro:IPR014741" /db_xref="InterPro:IPR014742" /db_xref="InterPro:IPR015940" /db_xref="InterPro:IPR018957" /db_xref="UniProtKB/Swiss-Prot:Q13191" /translation="MANSMNGRNPGGRGGNPRKGRILGIIDAIQDAVGPPKQAAADRR TVEKTWKLMDKVVRLCQNPKLQLKNSPPYILDILPDTYQHLRLILSKYDDNQKLAQLS ENEYFKIYIDSLMKKSKRAIRLFKEGKERMYEEQSQDRRNLTKLSLIFSHMLAEIKAI FPNGQFQGDNFRITKADAAEFWRKFFGDKTIVPWKIFRQCLHEVHQISSGLEAMALKS TIDLTCNDYISVFEFDIFTRLFQPWGSILRNWNFLAVTHPGYMAFLTYDEVKARLQKY STKPGSYIFRLSCTRLGQWAIGYVTGDGNILQTIPHNKPLFQALIDGSREGFYLYPDG RSYNPDLTGLCEPTPHDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLM CTSCLTAWQESDGQGCPFCRCEIKGTEPIIVDPFDPRDEGSRCCSIIDPFGMPMLDLD DDDDREESLMMNRLANVRKCTDRQNSPVTSPGSSPLAQRRKPQPDPLQIPHLSLPPVP PRLDLIQKGIVRSPCGSPTGSPKSSPCMVRKQDKPLPAPPPPLRDPPPPPPERPPPIP PDNRLSRHFHHVDSVPSRDQPMPLEAWCPRDIFGTNQSVGCRLLGDGSPKPGITASSN VNGRHSRMGSDPVLMRKHRRHDLPLEGAKVLSNGHLGSEEYDIPPRLSPPPLATALLP SIRCTGPLANSLSEKTRDSVEEADDEYKIPSSHPVSLNSQPSHCHNIKTPLRSCDNGH CILNGTHGTSSEMKKSNIPELGIYVKGDVFDSASDPVPLPPARPPTRDNPKHGSSLNR TPSDYDLLIPPLGEDAFDALPPSLPPPPPPARHSLIEHSKPPGSGSRPSSGQDLFLLP SDPFFDPASGQVPLPPARRLPGENVKSNRTSQDYDQLPSSSDKERNSSPPQHAGVRAH NSSKLNSDFQLSILLQPAYFQALFSKYAGENPDRDPSKDLKELIQRPPSEIFDGSQAP ARPPKPRPRRTAPEIHHRKPHGPEAALENVDAKIAKLMGEGYAFEEVKRALEIAQNNV EVARSILREFALPPPVSPRLNL" assembly_gap 425182..426059 /estimated_length=878 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 500676..500736 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 532992..533029 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 544189..544260 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 545246..545309 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 549570..549906 /estimated_length=337 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 558455..559266 /estimated_length=812 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 597541..597557 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 710357..710388 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 713092..713262 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 739476..739520 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 749292..749333 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 755916..756020 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 759513..759533 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 807833..807866 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 810625..812089 /estimated_length=1465 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 813801..813810 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 822361..822373 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 838862..838893 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 864178..864213 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 942709..942748 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 964013..964048 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 998377..998421 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1030628..1031138 /estimated_length=511 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1071437..1072651 /estimated_length=1215 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1074985..1075002 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1121880..1121933 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1130277..1130402 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1159294..1159385 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1210911..1210936 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1231507..1233832 /estimated_length=2326 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1269866..1270280 /estimated_length=415 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1290889..1291565 /estimated_length=677 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1416135..1416252 /estimated_length=118 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1430258..1430342 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1431843..1431867 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1437044..1437065 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1470633..1470665 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1477607..>1478050) /locus_tag="PAL_GLEAN10013343" mRNA complement(<1477607..>1478050) /locus_tag="PAL_GLEAN10013343" /product="60S ribosomal protein L17" CDS complement(1477607..1478050) /locus_tag="PAL_GLEAN10013343" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="60S ribosomal protein L17" /protein_id="ELK18138.1" /db_xref="InterPro:IPR001063" /db_xref="UniProtKB/Swiss-Prot:P24049" /translation="MQIRGFKSSVHCKNTHETAQAINSMHIQKATTYPKDATLRKQCV RFPSYNGGVGRCAQAKQWGWTQSRWPKKSAAVLLHMLKNAEGDAELEGLDVDSLVIEP IQVNKAPRMQHRTYRAHEQIKSYMSSPCLTEILTEKEQTVPEPEK" assembly_gap 1484216..1484248 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1494790..1494810 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1503670..1503727 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1508600..1508656 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1527500..1527583 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1585547..1585565 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1643998..>1644981 /locus_tag="PAL_GLEAN10013344" mRNA <1643998..>1644981 /locus_tag="PAL_GLEAN10013344" /product="Coiled-coil domain-containing protein 54" CDS 1643998..1644981 /locus_tag="PAL_GLEAN10013344" /codon_start=1 /product="Coiled-coil domain-containing protein 54" /protein_id="ELK18139.1" /db_xref="UniProtKB/Swiss-Prot:Q29RU3" /translation="MYKLQTKRAKAAAGQMWTSNLSKIRQSFKNVYHKCKNQHPDSTR NPTLTSYGCDQDDISTDEEMNHTVMLQDIKTSQIEILRQMTDVVSTVSKIQGKIDFYQ KQMEVLETRMNVNEDKQCTITKDIFSMKEDIDALKKKVTELENQNSCSGIHCLEILEG QKGKEVMELLHKLIQPETLKNTLASTDPDISSAEPEKVCSYSKPTDHLEEKTISSQIK VLKKNNHQNALSFKKAKSNIYIYPDFSTWIKLTFVHGGKWRFFLSATKLEEFIQWLLS RPTIPPEEPQLTTRRYCPFTGPIVSLTTICLSVFNYIYCLFGSSKEEVTRL" assembly_gap 1653657..1653667 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1693940..1693990 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1707220..1707298 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1710549..1710913 /estimated_length=365 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1720392..1720410 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1773523..>1773834 /locus_tag="PAL_GLEAN10013345" mRNA <1773523..>1773834 /locus_tag="PAL_GLEAN10013345" /product="hypothetical protein" CDS 1773523..1773834 /locus_tag="PAL_GLEAN10013345" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18140.1" /translation="MGCGGPRRRRPCEDTRRPAPRALRGPSPEWQRQAGRRCLPGGQR RQRRWRRDLRPGPREEEEEEGKEEEEEKREAFSAQTAASSSGHGYGDTPLVAPPLRKG V" assembly_gap 1780194..1780259 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1790852..1790884 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1817069..1817091 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1866097..1866217 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1868782..>2011685 /locus_tag="PAL_GLEAN10013346" mRNA join(<1868782..1868933,1884562..1884592,1928531..1928701, 1933564..1933806,1943681..1943876,1947641..1947708, 1956789..1956869,1959796..1959870,1967283..1967367, 1973583..1973584,1981985..1982993,1984011..1984149, 1987248..1987396,1995905..1995994,1997384..1997443, 2003632..2003751,2005736..2005922,2011598..>2011685) /locus_tag="PAL_GLEAN10013346" /product="HMG box transcription factor BBX" CDS join(1868782..1868933,1884562..1884592,1928531..1928701, 1933564..1933806,1943681..1943876,1947641..1947708, 1956789..1956869,1959796..1959870,1967283..1967367, 1973583..1973584,1981985..1982993,1984011..1984149, 1987248..1987396,1995905..1995994,1997384..1997443, 2003632..2003751,2005736..2005922,2011598..2011685) /locus_tag="PAL_GLEAN10013346" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="HMG box transcription factor BBX" /protein_id="ELK18141.1" /db_xref="InterPro:IPR000910" /db_xref="InterPro:IPR009071" /db_xref="InterPro:IPR019102" /db_xref="UniProtKB/Swiss-Prot:Q8WY36" /translation="MDSLDLTGKNSTAGASDLPPSREAVKDYVPPELVLTFSHLMDSP SILIREVHTQEDPKPLAVTVMKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKFLD FSEEEEEEEEEEDIEKVQLLGANGLEQDVGETEDDESPEQRARRPMNAFLLFCKRHRS IVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCSNTN KPVKSPTPSVNPRKKLWAFPSDSSKDSPSPKKAKTEETPQLNFGMADPTQMGGLSMLL LAGEHALGTPEVSSGSCKPDVSESPELRQKSPLFQFAEISSSTSHPNAPSKQCQSSAL FQFAEISSNTSQLGGAEPVKRCGKSALFQLAEAKMCLASEGMKMEESKLIKAKESDGG RIKELEKAKEEREMKMEKTDEAKLQKEAEFEKSAKENARDSKELRNFEEMQMNDIMAI KMEDPKETTKEDLDEDQKYSHFPDFSYSASSKIIISDVPSRKDHMCHPHGIMIIEDPA ALNKPEKLKKKKKKSKVDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGI EKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSKEKKMSKEKSSDTTKESRPPDFISI SASKNISGEVPEGIKAEPLTPTEDASPPSLSGPTKTEDSDSQRKTETCGSRKSERSCK GALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWNEESWTFNQSGTSGGKKFR KAKPKEDCLFGISKLDEEFEKKFNSLPQYSPVTFDRKCVPIPRKKKKTGNMPSEPTKT SKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSNKQFFLDAIHPTEEPTAAQ EPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLEDKPKEQLQRSLPKVTATGCNDEC AHSAEAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQA PVLISCADQ" assembly_gap 1878040..1878153 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1909993..1910007 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1933876..1933899 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1948518..1948668 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1963075..1963289 /estimated_length=215 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1980655..1980686 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2022672..2022742 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2042779..2042795 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2064058..2064076 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2070029..2070098 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2074518..2076076 /estimated_length=1559 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2094888..2094898 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2110570..2110603 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2121871..2122013 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2122169..>2125449 /locus_tag="PAL_GLEAN10013347" mRNA join(<2122169..2122231,2125042..>2125449) /locus_tag="PAL_GLEAN10013347" /product="hypothetical protein" CDS join(<2122169..2122231,2125042..2125449) /locus_tag="PAL_GLEAN10013347" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18142.1" /translation="LVKCQAMLKKVRVLDLENCRKDAKIHYCTLQGRGCCKELVYATL QPLWLASDFIQPSTLAGWEWEDTLPQSEHPLLSPGLFLRACPPRTHSRPFLTSKESLV FQQRGPKRQIIRRAPVDAERTLAASNHTGLDEGFQNLVPPQGCITQCLLKQLLL" assembly_gap 2132150..2132941 /estimated_length=792 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2144472..2149094 /estimated_length=4623 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2175023..2175072 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2196306..2196329 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2208468..>2274038) /locus_tag="PAL_GLEAN10013348" mRNA complement(join(<2208468..2208886,2209289..2209379, 2243186..2243217,2252472..2252570,2253580..2253672, 2254790..2254894,2265458..2265547,2273942..>2274038)) /locus_tag="PAL_GLEAN10013348" /product="Leukocyte surface antigen CD47" CDS complement(join(2208468..2208886,2209289..2209379, 2243186..2243217,2252472..2252570,2253580..2253672, 2254790..2254894,2265458..2265547,2273942..2274038)) /locus_tag="PAL_GLEAN10013348" /codon_start=1 /product="Leukocyte surface antigen CD47" /protein_id="ELK18143.1" /db_xref="InterPro:IPR013147" /db_xref="InterPro:IPR013270" /db_xref="UniProtKB/Swiss-Prot:Q9GKE8" /translation="MDRSDAVPGNYSCEVTELSREGEIIVELKHRVVLWFSPNENILI IIFPMLAILLFWGQFGVVTLKYSTVTKEKTILLFVAGLVLTIVMIVGAILFIPGEYST KKASGLGLIVVPTVILILLQYSVFMIAPAIGMSSFSIAILILQVLGFVLAVVGLRLCI SASNQRTIQPPRPSLSKNLDIVSVEVCDESPPVLLSTKALFLSFILLLVTKEESLSVQ VLRLLLIGEAVFVQLLIKLVLLPPGHSILIVFLLLYLFPLPRRASSLPGTALAHPGNA ARYPAAFHPGFPGGSPEEFDLNLINLHQNERSGYFERRQVAKIKIRIYCGYARMRTES RATNLEF" assembly_gap 2216848..2216865 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2224389..2224439 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2240047..2240212 /estimated_length=166 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2277940..2277987 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2284671..2284770 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2343693..>2392686) /locus_tag="PAL_GLEAN10013349" mRNA complement(join(<2343693..2343871,2344931..2344997, 2346731..2346793,2348365..2348496,2349299..2349370, 2368883..2369005,2382069..2382137,2386521..2386611, 2389031..2389149,2389951..2390113,2392475..>2392686)) /locus_tag="PAL_GLEAN10013349" /product="Intraflagellar transport protein 57 like protein" CDS complement(join(2343693..2343871,2344931..2344997, 2346731..2346793,2348365..2348496,2349299..2349370, 2368883..2369005,2382069..2382137,2386521..2386611, 2389031..2389149,2389951..2390113,2392475..2392686)) /locus_tag="PAL_GLEAN10013349" /codon_start=1 /product="Intraflagellar transport protein 57 like protein" /protein_id="ELK18144.1" /db_xref="InterPro:IPR019530" /db_xref="UniProtKB/Swiss-Prot:Q5EA95" /translation="MAAAAAVVTPSGLEDGVSRSRGEGAGEVVVERGPGAAYHMFVVM EDLVEKLKLLHYEEELLRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKAGRPF EQPQEYDDPNATISNILSELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIG FTWKRPTYPVEELEEETVPEDDAELTLNKVDEEFVEEETDNEENFIDLNVLKAQTYRL DMNESAKQEDILESTTDAAEWSLEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIE SALKETKGFLDKLHNEITRTLEKIGSREKYINNQLEHLVQEYRAAQAQLSEAKERYQQ GNGGVTERTRLLSEVTEELEKVKQEMEEKGSSMTDGAPLVKIKQSLTKLKQETVQMDI RIGVVEHTLLQSKLKEKSNMTRDMHATIIPESAMGSY" assembly_gap 2379965..2380022 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2383893..2383943 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2392407..2392451 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2400190..>2494660 /locus_tag="PAL_GLEAN10013350" mRNA join(<2400190..2400232,2490337..2490675,2491869..2492135, 2494302..>2494660) /locus_tag="PAL_GLEAN10013350" /product="HERV-H LTR-associating protein 2" CDS join(2400190..2400232,2490337..2490675,2491869..2492135, 2494302..2494660) /locus_tag="PAL_GLEAN10013350" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="HERV-H LTR-associating protein 2" /protein_id="ELK18145.1" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR003597" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="UniProtKB/Swiss-Prot:Q9UM44" /translation="MAHRLCGYLNPQEEGFFSHSSSLNEKIVIGELNEDVILPCSFES GPNIVIHWKNQDYNVHTYYKDSDHLEKQDPRYTNRTSLFHGEIHNGNASLSFRRLSLP DEGSYMCYVATTSIKIISKVVLKVGAFVTPEIKYEKRNTHNFLICGVLHVFPYPVITW QVDNTPISESNIEEIRDFGSFCIKSRVNITGSNATYECTIENSLLKQTWSGRWTMKDG LHKMQRENVLLSCELANYLFLPNQDFVVTWSRMKSETFSVLAYFLSSSQNAVINEPRL LWSKELINQSDFSLTLRDLSPLDSGEYLCNISSSKYTSLTFQTVHVGKLQVGLDNGFW L" assembly_gap 2412714..2412780 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2431954..2431965 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2466068..2466114 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2472041..2473700 /estimated_length=1660 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2505480..>2626463) /locus_tag="PAL_GLEAN10013351" mRNA complement(join(<2505480..2505689,2506619..2506714, 2515427..2515531,2518360..2518527,2520655..2520780, 2524453..2524656,2525190..2525382,2531039..2531154, 2534630..2534754,2536958..2537307,2540466..2540662, 2543146..2543264,2548153..2548279,2553425..2553814, 2556133..2556223,2559098..2559237,2560917..2561093, 2562167..2562409,2565431..2565686,2569292..2569428, 2571071..2571194,2572082..2572199,2574952..2575039, 2575680..2575747,2578413..2578545,2579549..2579725, 2587683..2587853,2588407..2588556,2593318..2593436, 2598043..2598181,2599426..2599529,2617565..2617721, 2622285..2622391,2626376..>2626463)) /locus_tag="PAL_GLEAN10013351" /product="Myosin-15" CDS complement(join(2505480..2505689,2506619..2506714, 2515427..2515531,2518360..2518527,2520655..2520780, 2524453..2524656,2525190..2525382,2531039..2531154, 2534630..2534754,2536958..2537307,2540466..2540662, 2543146..2543264,2548153..2548279,2553425..2553814, 2556133..2556223,2559098..2559237,2560917..2561093, 2562167..2562409,2565431..2565686,2569292..2569428, 2571071..2571194,2572082..2572199,2574952..2575039, 2575680..2575747,2578413..2578545,2579549..2579725, 2587683..2587853,2588407..2588556,2593318..2593436, 2598043..2598181,2599426..2599529,2617565..2617721, 2622285..2622391,2626376..2626463)) /locus_tag="PAL_GLEAN10013351" /note="GO_component: GO:0016459 - myosin complex [Evidence IEA]; GO_function: GO:0003774 - motor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]" /codon_start=1 /product="Myosin-15" /protein_id="ELK18146.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR001609" /db_xref="InterPro:IPR002928" /db_xref="InterPro:IPR004009" /db_xref="InterPro:IPR009053" /db_xref="UniProtKB/Swiss-Prot:Q9Y2K3" /translation="MDLSELGEAATFLRTSEVELLPLQATALDEKKKCWIPDGKNAYV EATFKGSGDDGKIIVETTDGKTYSGLFCVSINPYKWLPVYQKEVMAAYKGKRRSEAPP HIFAVADNAFQDMLHNMLLVSENPSDFHFCSYGVAAVESLDDAEELLATDQAMDILGF LPEEKYGSYKLIGAIMHFGNMKFKQKPREEHAEADGTESAEKTAFLMGINSSELVKCL IHPRIKIGNEYVTRAQNVEQVSYAVGALSKSIYERMFKWLVARVNRAMDAKLSRQFFI GILDITGFEILDYNSLEQLCINFTNEKLQQFFNQHMFVLEQEEYREESIGWVSIDFGL DLQACIDLIEKPMGIFSILKEECMCPQATDVTFMTKLFDNHFGKSVHFQKPKPDKKEY EAHFEFVHYAGVVPYNISGWLEKNKDLLNETVVAVFQKSSNRLLANLFENYISTDSAL QFGEKKRKKGASFQTVASLHKENLNQLMTNLKSTAPHFVRCINPNVNKMPGVMDPYLV LQQLHCNGVLEGIRIYREGFPNRLLYADFKQRYCILNPKAFPKSKFMSSRKAAEKLLG SLEIDHTQYRLGITKVFLKAGFLGQLEAMKNERLSKVFTLFQARVRGKLMRIKFQRIL AERDALLLIQWNIRVFMAVKNWPWMRLFFKIKPLVKSAGMGKEVAGLKEECVQLQKAL EKSESQREELKAKQVSLIWEKNDLLLQLQAEQETLANAEEQSESLIKSKIQLEARVKT LSARVEEEEEINSELTARGRKLEDECSELKKEIDDLETMLAKSEKEKHATEHKVKNLT EEVESLNEDISKLNRMTTVMQEAHQQTLDDLHSEEEKLSNMSKAKVKLEQQVDEGTLE QERKARMNCEREKRKLEGDLKLNQESMAYLESSQLQLAEKLRKKDLEMSQMNSKVENE KGLVAQLQKTVEELQTQIQHLKKELEAERTTRAKVERERADLTQELEDLNERLEEARG ASLAQLEITKKQETKFQKLRRDMEEATLHFEVTSASLKKRHADSLAELEGQVENLQQV KQKLENDKTDLQLEADDLLTHVEQMTRAQANTEKLCSLYKERLTEASVKLDEVTQLVN DLTAQKTKLWSENGEFLRKLEEKEALINQLSREKSTFTRQIEELNGQLKEETKSQSAL AQALRSAKHDYDLLREQYEEEHEAKAELLRALSKGSADVVQWRMKYEDDTIQRTEDLE DAKKKLAIRLQEAAEAVGEANARNASLERARHHLQLELGDALLDLGKARSMAAALDQK QQHFDKCLDDWRQRHEESQMMLDASQKEARVLSTELLKLRNAFKESTMNQETLQRENK NLQEEISNLTNQVREGKKNLSEMETVKKRIEQEKTEVQVALEEAEGALERNESKILRF QFELLETKKELERKLSEKDEEIENFRRNQQYAIDSLQSSLDSETKSRIEATRLTKSME GNLGEMGLQLSTANQRVSEATKSLNQLQTQIKDLRVQLDDSTHLNSELKEQVAVAERH NSLLKSELEELRSLQEQTERGRRLAEEELLEATERINLFHTQNTSLLSQKKKLEVDVA RMQKEAEEAVQACQNAEEKAKKAATEVANMSEELKKEQDTNAHLEKMRKNMEQTVKDL QKSLNEAEKALTGNRKQIQKLESRVHELEGELEGETRRSAEAQRGARRLERCIKELTY QAEEDKKNLSRMQTLMDNLQLKLQSYKQQTEAAEAQANQYLSKYKKQQRELNETKERA EIAESQVNKLKIKAREFGKKVFQIFNSVLLKHACIELIASHGPV" assembly_gap 2519363..2519429 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2540730..2540755 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2565050..2565070 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2573138..2573203 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2588771..2588788 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2666675..>2700352) /locus_tag="PAL_GLEAN10013352" mRNA complement(join(<2666675..2666845,2667886..2668025, 2668699..2668781,2669016..2669129,2671579..2671775, 2674404..2674514,2674595..2674669,2675149..2675344, 2677586..2677704,2679169..2679268,2680295..2680447, 2681944..2682098,2683172..2683390,2690156..2690231, 2691713..2691858,2692012..2692134,2692972..2693068, 2693563..2693657,2694520..2694632,2696360..2696507, 2700251..>2700352)) /locus_tag="PAL_GLEAN10013352" /product="Protein CIP2A" CDS complement(join(2666675..2666845,2667886..2668025, 2668699..2668781,2669016..2669129,2671579..2671775, 2674404..2674514,2674595..2674669,2675149..2675344, 2677586..2677704,2679169..2679268,2680295..2680447, 2681944..2682098,2683172..2683390,2690156..2690231, 2691713..2691858,2692012..2692134,2692972..2693068, 2693563..2693657,2694520..2694632,2696360..2696507, 2700251..2700352)) /locus_tag="PAL_GLEAN10013352" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Protein CIP2A" /protein_id="ELK18147.1" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q8TCG1" /translation="MDATACLKSLLLTINQYKAVKSEANGTQLLRHLEVISGQKLTRL FTSNQILPSECLSCLVELLEDPNISAPLILSIISLLSQLAVDNETRDCLQNTYNLNNV LAGVVCRSSTCHSDSVFLQCIQLLQRLTYNVKIFHSGANIDELITFLIDHIQSSEDEL TMPCLGLLANFCRHNLSVQTYIKTLNNVKSFYRTLISFLAHSSLTVVVFALSILSSLT LNEEVGEKLFHARNIHQTFQLIFNILINGDGTLTRKYSVDLFMDLLKIPKIADYLTRY EHFSSCLNQVLSLLNGKDPDSSSKVLELLLAFCSVTQLRHVLTQMIFEQIPSGNTILG SRSKCLEPTVALLRWSSQPLDGSENCSILALELFKEIFEDVIDTANSSSADRFVTLLL PAVLDQLQFTEQKLDDALVRKKCERMVKAVEVLQNLPLCGDDTLKMHVAKILTTIKCT TLIEQQFTYGKIDLGFGTKVADSELCKLAADVILKTLDLMNKLKQSVPGMEVSFYKIL QDPRLITPLAFALTSDNREQVQSGLGLLLEAAPLPDFPALVLGESIAANNAYRQQETE HMPRRMPLQLLNHSFPTSVKCFTPPLLKDRVPGLNIEELIEKLQSGVVVKDQINDVRI SDIMDVYEMKLSTLASKESRLQDLLEAKALALAQADRLIAQYRCQRTQAETEARTLAG MLREVERKNEELGVLLKSQQIESERAQSDIEHLFQHNRKLESVAEEHEVLTKSYMELL QRNETTEKKNKDLQITCDSLNKQIETVKKLNEALKQQNEKTVAQLIEREEQRKEVQNQ LVDRECKLANLQQKTKVQEEKIKVLQKEREDKEEAIDILRKELTRTEQIRKELSIKAS SLEVQKAQLEGRLEEKESLVKLQQEELNKHSHMIAMIHSLSGGKINPETVNLSI" assembly_gap 2674905..2674955 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2709712..2709764 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2713227..>2793565 /locus_tag="PAL_GLEAN10013353" mRNA join(<2713227..2713258,2715514..2715583,2717952..2718107, 2726423..2726539,2728226..2728306,2731524..2731648, 2734397..2734511,2739717..2739836,2743565..2743617, 2749264..2749340,2751007..2751624,2753719..2753751, 2754792..2754961,2755757..2755801,2758628..2758653, 2760952..2761117,2762597..2762692,2762823..2762950, 2767007..2767075,2769502..2769598,2770859..2770962, 2772482..2772569,2774026..2774127,2777893..2778018, 2779995..2780134,2781371..2781491,2791625..2791768, 2791854..2791955,2793455..>2793565) /locus_tag="PAL_GLEAN10013353" /product="E3 ubiquitin-protein ligase DZIP3" CDS join(2713227..2713258,2715514..2715583,2717952..2718107, 2726423..2726539,2728226..2728306,2731524..2731648, 2734397..2734511,2739717..2739836,2743565..2743617, 2749264..2749340,2751007..2751624,2753719..2753751, 2754792..2754961,2755757..2755801,2758628..2758653, 2760952..2761117,2762597..2762692,2762823..2762950, 2767007..2767075,2769502..2769598,2770859..2770962, 2772482..2772569,2774026..2774127,2777893..2778018, 2779995..2780134,2781371..2781491,2791625..2791768, 2791854..2791955,2793455..2793565) /locus_tag="PAL_GLEAN10013353" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="E3 ubiquitin-protein ligase DZIP3" /protein_id="ELK18148.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR018957" /db_xref="UniProtKB/Swiss-Prot:Q86Y13" /translation="MDSLPEEFFVRDPPVVEQTKKETKNEVEKSTDPLDKQEKDIPTD LVPVNLLLEMKKLLNAINTLPKGVVPHIKKFIQEDFSFQTMQREVAANSQSGEEIVPA LTLRFLITQLEAALRNVQATNYTAHQINIGYYLTLLFLYGVSLTERGKKEDYTEAENK FLVMKMVIQENEICENFMSLVYFGRGLLRCAQKRYNGGLLEFHKSLQEIGDTNDHWFD IDPTEDKDLPTTFKGLLNNFIKTTENNIMKQTICSYLDCERSCEADILKNTNYKFEVV RKDEYITIENLGASYKKLMSLKITDTDIRPKISLKFSTKDEMPVFKLDYNYFYHLLHI IIISGTDIVRQIFDEALPPPLLKKELLIHKNVLEPYYNHLWTNHPLGGAWHLLYPPNK ELPQSKQFDLYLLLALIKHLNVFPAPKKGWNMEPPSSDLSKSADILRLCKYRDILLSE ILMNGLTESQFNSIWKKVSDTLLRLGMKQEDIDKVKENPIENIALDYHQLSIYLGIPV PEIIQRMLSCYQQGIALQSITGSQRIEIEELQNEEEVLSPPLMEYNINVKSNPEIQLA EMNKDGASIPSESSTESIKDLQEVKSKPKKKKKTKNKKNKESKEEQAPNMVEKEEQLK EEPANLHSVSRFMKDDASDVQEDSSTEDKFYSLDELHILDMIEQGSTNKVTTEYGETE KEKLARQQQLYKLHYQCEDFKRQLKTVTFRWQENQMQIKKRDKIITSLNQQVAFGINK VSKLQRQSHAKDNEIKNLKEQLSMKRSQWEMEKHNLESTIKTYLTKLNAETSRALTAE VYFLQCRRDFGLLHLEQTEKECLSQLARVTQMAASNLESLQLKAAVDSWNTIVTDVRN KIAFLRTQYNEQINKVKQGFALSTLPPIQLPPPPPSPEILMQQFLGRPLVKESFFRPI LTVPQMPAVCPAVISAPGQPRPSLMTGIAWTVPGPVGEPVSPSAGLGSDLSMMNWERI TDRLKTAFPQQTRKELTDLLRKLKDAHGKSLSGLTFDEIVYKISQFIDPKRAQSQGKS VPNGSCVSPSHTPPQSNASQPPKQAWRPLSSQGPATWEGANNLDDEEEEKEPCVICHE NLSPENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLHVLLPEEFPGHSSRHLPKI" assembly_gap 2783826..2785875 /estimated_length=2050 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2822294..2822328 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2845288..2845303 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2859600..2878148 /estimated_length=18549 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2886062..2886405 /estimated_length=344 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2951503..2951554 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2966712..>2995980) /locus_tag="PAL_GLEAN10013355" mRNA complement(join(<2966712..2966866,2974103..2974190, 2978223..2978372,2983018..2983113,2995777..>2995980)) /locus_tag="PAL_GLEAN10013355" /product="Guanylyl cyclase-activating protein 3" CDS complement(join(2966712..2966866,2974103..2974190, 2978223..2978372,2983018..2983113,2995777..2995980)) /locus_tag="PAL_GLEAN10013355" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="Guanylyl cyclase-activating protein 3" /protein_id="ELK18149.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:O95843" /translation="MGNNESTAGGQTAIPAKETYVWYKKFMMEYPSGLQTLHEFKTLL GLQGLNQKANQHVDQVYNTFDMNKDHSGKQRESDGRTILSILDDIYSDILSRDFYKDG FIDFLEFIAAVNLVVRGKMEQKLKWYFKLYDADGNGSIDKKELLNIFMTVQTLNGQQT LSPEEFTSLVFHKIDINHDGELTLEEFIDGTKKDQDLLKIVSKSFDFSSVLKLIRNGK QPDTGGGFLQIT" assembly_gap 2982795..2982827 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2985765..2985810 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2999987..>3136292) /locus_tag="PAL_GLEAN10013356" mRNA complement(join(<2999987..3000142,3002905..3003099, 3010223..3010276,3011803..3011890,3019005..3019151, 3022570..3022636,3024743..3024812,3037396..3037500, 3041363..3041605,3042639..3042704,3056302..3056440, 3061205..3061310,3082861..3083015,3085268..3085411, 3093612..3093676,3095804..3095877,3096578..3096657, 3107200..3107325,3122826..3122931,3125122..3125281, 3129594..3129702,3130343..3130433,3133410..3133478, 3136169..>3136292)) /locus_tag="PAL_GLEAN10013356" /product="MORC family CW-type zinc finger protein 1" CDS complement(join(2999987..3000142,3002905..3003099, 3010223..3010276,3011803..3011890,3019005..3019151, 3022570..3022636,3024743..3024812,3037396..3037500, 3041363..3041605,3042639..3042704,3056302..3056440, 3061205..3061310,3082861..3083015,3085268..3085411, 3093612..3093676,3095804..3095877,3096578..3096657, 3107200..3107325,3122826..3122931,3125122..3125281, 3129594..3129702,3130343..3130433,3133410..3133478, 3136169..3136292)) /locus_tag="PAL_GLEAN10013356" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="MORC family CW-type zinc finger protein 1" /protein_id="ELK18150.1" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR011124" /db_xref="UniProtKB/Swiss-Prot:Q86VD1" /translation="MLVESRKCLGCSICSSRGIICMEVEECSMDWGVVTRDDLGELDN ENLQGGFILCFLDDGCGMSPEEASDIIYFGTSKKRLSTLKFIGQYGNGLKSGSMRIGK DCILFTKKEETMTCVFFSQTFCEREGLSEVVVPIPSWLTKTRESVTDDPQKLSMELSI IYKYSPFKTEAELMQQFDVIYGKCGTLLVIYNLKLLLNGEPELDVKTDKEDILIAGAL EEFPERWSFRAYTSVLYFDPWMRIFIQAKRVKTKHLCYCLYRPRKYLYVTSSFKGTFK NEVKKAEEAVKMAELILKEAQIKVNQPDRSSLSSPTKDVLQKAVEDVEAKHKILKEKR RELKKARTLSLFFGVNIENQSQAGMFIYSNNRLIKMHEKVGPQLKLKSLLGAGVIGIV NIPLEIMEPSHNKQEFLNVQEYNHLLRVMGQYLVQYCKDTGINICLKWRVLPSSTNHQ EKEDFDIWICANNPNLLENSCHHTECLPSIPLGTMSTVSPSKNKKDKQLRESVQRYQN RLTEQQPQLQFIPTSRIAEFTTTCQTSASKENTKSQKIRSSGNDLKHESLASSELSVS HRGQKRNMEGTDSDVEYISETKVMKKSTQRKVKQRQKHPAALPENVKLAKRSQASSWE VKRKQNQNLVQECKTLIEVETSNSYPDLILVLDQSDTDASLKQEKKEVSLMKKEKQEP CSDAAEIKRHSSLLNRESVPMEDLNTSFGQKARVSVNGESKVPSLLTNSSQSTSVKET VRKLTSNLWEILLYFFPEYQLSSEFSYTSVEELIASSELEQCPEQTNKKLKMCFYQIQ NVYMVQYEKKLKRKIQSIIDDANRRGVINEISLVQCEKKRKLTEDKLHNLHVKLAALL QKLQLGGPAGDLEQIDSYLEALLKEDNLLFQNTLNKGTTDTGQSLPLEKNESTSQN" assembly_gap 3019971..3020064 /estimated_length=94 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3029291..3030163 /estimated_length=873 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3042438..3042501 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3080500..3080518 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3089575..3089631 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3091936..3091946 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3125776..3125795 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3146969..3147111 /estimated_length=143 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3169729..3170179 /estimated_length=451 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3177016..3177032 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3198877..3198923 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3200444..3200459 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3208216..3209295 /estimated_length=1080 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3211933..3213163 /estimated_length=1231 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3217854..3218682 /estimated_length=829 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3238676..3238882 /estimated_length=207 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3278453..3278519 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3290560..3290596 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3292276..>3323178) /locus_tag="PAL_GLEAN10013358" mRNA complement(join(<3292276..3292560,3292984..3293067, 3293161..3293306,3294705..3294852,3311724..3311833, 3313400..3313673,3313912..3313962,3314051..3314211, 3315839..3315937,3323064..>3323178)) /locus_tag="PAL_GLEAN10013358" /product="Developmental pluripotency-associated protein 4" CDS complement(join(3292276..3292560,3292984..3293067, 3293161..3293306,3294705..3294852,3311724..3311833, 3313400..3313673,3313912..3313962,3314051..3314211, 3315839..3315937,3323064..3323178)) /locus_tag="PAL_GLEAN10013358" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]" /codon_start=1 /product="Developmental pluripotency-associated protein 4" /protein_id="ELK18151.1" /db_xref="InterPro:IPR003034" /db_xref="UniProtKB/Swiss-Prot:Q7L190" /translation="MVGKRILNEDKNLTTEAITGVQVRRHEILNSDSSYENEVEAEEE QRAAGEPSMQKTSGKGTKRKRPIEADKASCPQKMAQDDKKVKLRKKIPIPPLPSKLPP VNLLHRDIVRAWCQQLKLCTKGLKLDVYRRLCEYAYPNQKDIPITAKEAKILTKSQIK LKMKRGEITLDPSEVTAVFKEGASVLEGSTALLDEMDNVVMTTSTPNAVFASWTRIAA RAGKIEAVKSSQEASRVMWCVVHGRSLPADTEGWVQLQFYAGQAWVPEKQGRDFFENQ LDEESVILTLVPAYEEPNEEHQMQPSISLASEASLKTPRTDDKVYLPQMHENFKACPK SILPLPTILPSINKVRWDTLRNWCQQFNLSTDGKKIDVYLRLKEHAYTEEKEVTEEYE DSIKDVPETSQEATLQSSSKKCKMVTKRTRNQKSYKMSEREKGTNTVEVITSAQEAML AAWARIAARAVQPKTVNSCFIPTSAENFLLQTSGKINLKE" assembly_gap 3320354..3320390 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3335925..3335940 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3344653..3344967 /estimated_length=315 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3370665..3370768 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3385211..3385233 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3394836..3394878 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3421699..3422390 /estimated_length=692 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3430326..3430466 /estimated_length=141 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3471728..3471779 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3504165..3504185 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3510082..3510102 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3534657..3534682 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3548789..3548847 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3573981..3574131 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3596187..3596214 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3596805..3596855 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3598048..3598071 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3612003..3612709 /estimated_length=707 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3615082..3616738 /estimated_length=1657 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3628238..3628641 /estimated_length=404 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3689989..3690038 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3693504..3693533 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3700986..3700997 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3739244..3739278 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3761631..3762058 /estimated_length=428 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3797772..3797793 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3858015..3858028 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3868861..3869276 /estimated_length=416 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3892304..3892416 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3911132..3911189 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3918144..3918165 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3922898..3922966 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3966019..3966028 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4007722..4007731 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4029068..4030495 /estimated_length=1428 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4035225..4035346 /estimated_length=122 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4036826..4037138 /estimated_length=313 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4050907..4050970 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4102135..4102147 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4113249..4113264 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4137659..4137819 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4146780..4146855 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4157652..4157678 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4159801..4159843 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4178651..4178810 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4180333..4183504 /estimated_length=3172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4229880..4230253 /estimated_length=374 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4304922..4304968 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4331450..4331465 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4340297..4340351 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4354720..4355430 /estimated_length=711 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4368582..4368648 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4384301..4384315 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4386847..4386876 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4399509..4399544 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4407945..4408031 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4414778..4414858 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4431131..4431161 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4442641..>4549188) /locus_tag="PAL_GLEAN10013360" mRNA complement(join(<4442641..4442955,4443185..4443389, 4549169..>4549188)) /locus_tag="PAL_GLEAN10013360" /product="hypothetical protein" CDS complement(join(4442641..4442955,4443185..4443389, 4549169..4549188)) /locus_tag="PAL_GLEAN10013360" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18152.1" /db_xref="UniProtKB/Swiss-Prot:Q1RN00" /translation="MMIIDEIPEEVARSTPPKEDSKDKDNKKEEEKVEPYQPTIFPTS LVPLQSEEGEVVDAKPILLSAQENDPDLLSEGKLQSQQNEGACVMHQEYQVQPCGFSV SREPRPSSPAVTSLASPLHCISHFLSCVCQTFSRSRKQKPPIREGAKQAEAGGDAKAP RFGTLRCLGKNKVQPHETL" assembly_gap 4460532..4460551 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4477338..4477368 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4503821..4503832 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4550757..4551472 /estimated_length=716 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4575807..4575863 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4580811..>4651229 /locus_tag="PAL_GLEAN10013361" mRNA join(<4580811..4581153,4588242..4588538,4591278..4591395, 4595603..4595754,4604512..4605062,4615761..4615885, 4618072..4618156,4650168..4650230,4651050..>4651229) /locus_tag="PAL_GLEAN10013361" /product="Poliovirus receptor-related protein 3" CDS join(<4580811..4581153,4588242..4588538,4591278..4591395, 4595603..4595754,4604512..4605062,4615761..4615885, 4618072..4618156,4650168..4650230,4651050..4651229) /locus_tag="PAL_GLEAN10013361" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Poliovirus receptor-related protein 3" /protein_id="ELK18153.1" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="InterPro:IPR013162" /db_xref="UniProtKB/Swiss-Prot:Q9NQS3" /translation="GALAGPIIVEPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGK SSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPL GNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHINWEGDLGEM ESTTTSFPNETATIVSQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEV SVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVYPLT FNYSGVYVCKVTNSLGQRSDQKVIYISDPPTTTTLQPTIQWHPSTADIEDLATEPKKL PFPLSTLATIKDDTIGTIIASVVGGALFVILVSVLAGIFCYRRRRTFRGDYFAKNYIP PSDMQKESQIDVLQQDELDSYPDSVKKENKNPVNNLIRKDYLEEPEKTQWNNVENLSR FERPMDYYEDLKMGMKFVSDEHYDENEDDLVSHVDGSQTSSIAIAGAIIGAVLALFII AVFVTVLLTPQKKRPSYLDKVIDLPPTHKPPPMYEERSPPLPQKDLLYQTEHLPLQTQ FKEREVGGLQHSNGLNSRRFDYEDENPVREDGIQQMYPLYNQMCYQDRSPGKHRQNND PERAYINPREHYV" assembly_gap 4628349..4628358 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4630825..4631261 /estimated_length=437 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4633651..4633674 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4660319..4660344 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4739915..4740001 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4745212..4745275 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4753199..4755665 /estimated_length=2467 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4767166..4767224 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4813055..4813064 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4842799..4842808 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4870300..4870334 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4875284..4875327 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4878132..>4968623 /locus_tag="PAL_GLEAN10013363" mRNA join(<4878132..4878192,4880122..4880475,4892128..4892252, 4915992..4916082,4918007..4918195,4924983..4925075, 4962251..4962313,4963096..4963185,4966124..4966247, 4968515..>4968623) /locus_tag="PAL_GLEAN10013363" /product="T-cell surface protein tactile" CDS join(4878132..4878192,4880122..4880475,4892128..4892252, 4915992..4916082,4918007..4918195,4924983..4925075, 4962251..4962313,4963096..4963185,4966124..4966247, 4968515..4968623) /locus_tag="PAL_GLEAN10013363" /codon_start=1 /product="T-cell surface protein tactile" /protein_id="ELK18154.1" /db_xref="InterPro:IPR003599" /db_xref="UniProtKB/Swiss-Prot:Q3MHP9" /translation="MEKKWTYCAVYSIIQIHFVRGVSEETFNAGKDIYALPGSDVNLT CQTQKKGLVQMQWSKVTEKVDLIALYHPQHGFHCASGIPCTSLVAFTETPGNVSKWTL LLRNMSSSLSGKYECSFTLYPEGIQTKIYNLLIQTNVTQDEWRSNNTIEIEINETLEI PCFQNISSEISSEFTFAWSVRIFTCSLRNVYPTANLTWFIDRSFPQGEREEIYTTTEE RKNKGGFLELKSVLTRVYGNKPAQSNNLTIWCMALSPVPGNKVWNISSKKITFSLGSV APPTNPALNFTESTLDIQPSSANSIPPTNSWMPSEMYSPFPSNIGSTLHGDVFTSTSK ALSSILTTANGSTENNQIHITGIVVNRPKEGMSWPVIVAALLFICLVLFGLGLRKWCQ YQREIMERPPPFKPPPPPIKYTCIQESIGSDLPCHEMDTL" assembly_gap 4882121..4882215 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4934924..4935010 /estimated_length=87 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4939301..4942063 /estimated_length=2763 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4947029..4947045 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4951401..4954718 /estimated_length=3318 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4972880..4973779 /estimated_length=900 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4985740..4985762 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4990294..4994367 /estimated_length=4074 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4997115..>5036789 /locus_tag="PAL_GLEAN10013365" mRNA join(<4997115..4997241,5025384..5025844,5030864..5031105, 5036630..>5036789) /locus_tag="PAL_GLEAN10013365" /product="PI-PLC X domain-containing protein 2" CDS join(4997115..4997241,5025384..5025844,5030864..5031105, 5036630..5036789) /locus_tag="PAL_GLEAN10013365" /note="GO_function: GO:0004629 - phospholipase C activity [Evidence IEA]; GO_function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]; GO_process: GO:0006629 - lipid metabolic process [Evidence IEA]; GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]" /codon_start=1 /product="PI-PLC X domain-containing protein 2" /protein_id="ELK18155.1" /db_xref="InterPro:IPR000909" /db_xref="InterPro:IPR017946" /db_xref="UniProtKB/Swiss-Prot:Q0VAA5" /translation="MGTICSPNPSGTKTSSEVCNADWMASLPPHLHNVPLSNLAIPGS HDSFSYWVDEKSPVGPDQTPAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFD LRVSSKPGDADQEIYFIHGLFGIKVWDGLMEIDSFLTQHPQEIVFLDFNHFYAMDEAH HKCLVLRIQEAFGSKLCLACSVESLTLRILWEKKCQVLIFYHCPFYKQYPFLWPGKKI PAPWANTTSVCKLILFLETTLSERAPRGAFHVSQAILTPRAKTIARGLVGGLKNTLVH RNLPAILDWVKTQKPGVMGVNIITSDFVDLVDFATTVIELNDLLQEDRALAKC" assembly_gap 5005043..5005070 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5022779..5022825 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5032410..5032470 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5049326..5049363 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5080452..5080464 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5094498..5095291 /estimated_length=794 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5096879..5096897 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5149847..5150159 /estimated_length=313 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5168631..5168790 /estimated_length=160 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5168942..>5234513 /locus_tag="PAL_GLEAN10013366" mRNA join(<5168942..5169733,5185741..5186124,5194863..5195006, 5196252..5196389,5206797..5206925,5212288..5212443, 5213400..5213510,5216163..5216252,5219541..5219684, 5222465..5222605,5223768..5223867,5231091..5231298, 5234357..>5234513) /locus_tag="PAL_GLEAN10013366" /product="Pleckstrin like proteiny-like domain family B member 2" CDS join(5168942..5169733,5185741..5186124,5194863..5195006, 5196252..5196389,5206797..5206925,5212288..5212443, 5213400..5213510,5216163..5216252,5219541..5219684, 5222465..5222605,5223768..5223867,5231091..5231298, 5234357..5234513) /locus_tag="PAL_GLEAN10013366" /codon_start=1 /product="Pleckstrin like proteiny-like domain family B member 2" /protein_id="ELK18156.1" /db_xref="UniProtKB/Swiss-Prot:Q86SQ0" /translation="MWNGSDTGSSPISRSGAASMPSSPKQARKMSIQDNLTLQAKMSR HKEPTSESIGLRTRKYSGSSLSHMGAYSRSLPRLHKATENQLTPLSLPPRSSLGNSKR TKLGEKDLPHSIIDNDNYLNFSSLSSGALPYKISASEGNSYVSSTLSVPGSPRMARKM LLASSSSCTSDDLDRASFSGTSSGHSFPPGEPDRVFMARRNFSCGSIELDDADLDSLR QASGTPQPVFRERKSSISSISGRDDLMDYHRRQREERLREQEMERLERQRLETILSLC AEYTKSDSHLSTGTTVADVQKINKELEKLQLSDEESVFEEALVSPDVRYRCHQKGSVH DADLAVFGNVSQSNASFLSPRSVRNEELLRDLTRNPPPPSSAFPKASNESTYLSILPK TPEGISEEQRIQELAAMEETRIAILNNLEELEQKIKDINDQMDESSRELDMECALLDG EQKSETTELMKEKEILDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQ KTQLDNCPESMREQLQQQLKRDADLLDVESKHFEDLEFQQLEHESRLDEEKENLTQQL LREVAEYQRNIVARKEKISALKKQANHIVQQAQREQDHFVKEKNNLIMMLQREKENLC NLEKKYSSLSGGKGFPVNPNTLKEGYISVSEINEPCGNATNLSPSTQFPADADAVTTG PTTAVLVSQPQNKEHFRSLEERKKQHKEGLYLSDTLPRKKTTPSTSPHFSSATMGRST APKAHLPLGQSNSCGSVLPHSLATMTKDSESRRMLRGYNHQQMSEGQRQKSSEFYNRT ASESNVYLNSFHYPDHSYKDQAFDTLSLDSSDSMETSISACSPDNISSGFFLELFPRV ENENGSTEHATLRKQYYCRVIIPSGYLCAAMIIFHSYFTQN" assembly_gap 5174533..5174586 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5180534..5181233 /estimated_length=700 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5241151..>5247653 /locus_tag="PAL_GLEAN10013367" mRNA join(<5241151..5241288,5243100..5243319,5246834..5246919, 5247513..>5247653) /locus_tag="PAL_GLEAN10013367" /product="Pleckstrin like proteiny-like domain family B member 2" CDS join(5241151..5241288,5243100..5243319,5246834..5246919, 5247513..5247653) /locus_tag="PAL_GLEAN10013367" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Pleckstrin like proteiny-like domain family B member 2" /protein_id="ELK18157.1" /db_xref="InterPro:IPR001849" /db_xref="UniProtKB/Swiss-Prot:Q86SQ0" /translation="MEAKKRALEEEKRRRELLEKRLQEETSQRQKLIEKEVKIREKQR AQARPLTRYLPVRKEDFDLRSHVETAGHNIDTCYHVSITEKTCRGYLIKMGGKIKTWK KRWFVFDRNKRTFSYYADKHETKLKGVIYFQAIEEVYYDHLKNANKSPNPLLTFSVKT HDRIYYMVAPSPEAMRIWMDVIVTGAEGYTHFLL" assembly_gap 5244242..5244254 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5252645..>5265021 /locus_tag="PAL_GLEAN10013368" mRNA join(<5252645..5252786,5255031..5255214,5259747..5259858, 5260233..5260370,5264677..>5265021) /locus_tag="PAL_GLEAN10013368" /product="Abhydrolase domain-containing protein 10, mitochondrial" CDS join(5252645..5252786,5255031..5255214,5259747..5259858, 5260233..5260370,5264677..5265021) /locus_tag="PAL_GLEAN10013368" /codon_start=1 /product="Abhydrolase domain-containing protein 10, mitochondrial" /protein_id="ELK18158.1" /db_xref="InterPro:IPR000073" /db_xref="UniProtKB/Swiss-Prot:Q5E9H9" /translation="MAGMGMAASAAWDPCWRWGWMSVSFGFHRSFSTLLARKPEHAPR RRPAFRQKTSISFLSRPDLPNLAYKRLKGKSPGIIFIPGYMSNMNGTKALAVEEFCKS LGHAFISFDYSGVGNSDGNLQECTVGRWRKDVLSVIDDLAVGPQILVGSSLGGWLMLH AAIARPQKVVALIGIASAVDGLVTQFNQLPVETKKEIEMKGVWSMPSKYNEEGAYHIQ YSFIKEAEHHCLLHSPIPVNCPVRLLHGMEDDIVSWHTSIQVADRVISKDVDVILRKH SDHRMKEKADLQLLVYTIDDLIDKLSTVVN" gene <5272678..>5284751 /locus_tag="PAL_GLEAN10013369" mRNA join(<5272678..5272857,5274015..5274189,5283139..5283241, 5284610..>5284751) /locus_tag="PAL_GLEAN10013369" /product="Transgelin-3" CDS join(5272678..5272857,5274015..5274189,5283139..5283241, 5284610..5284751) /locus_tag="PAL_GLEAN10013369" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007517 - muscle organ development [Evidence IEA]" /codon_start=1 /product="Transgelin-3" /protein_id="ELK18159.1" /db_xref="InterPro:IPR000557" /db_xref="InterPro:IPR001061" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR003096" /db_xref="UniProtKB/Swiss-Prot:Q3ZBY2" /translation="MANRGPSYGLSREVQEKIEQKYDADLENKLVDWIILQCAEDIEH PPPGRAHFQQWLMDGTVLCKLINSLYPPGQEPIAKISESKMAFKQMEQISQFLKAAEI YGVRTTDIFQTVDLWEGKDMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRR GFSEEQLRQGQNVIGLQMGSNKGASQAGMTGYGMPRQIM" assembly_gap 5286400..5286427 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5299768..5302575 /estimated_length=2808 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5305990..>5335382 /locus_tag="PAL_GLEAN10013370" mRNA join(<5305990..5306227,5308222..5308352,5310162..5310229, 5311325..5311518,5313201..5313429,5314740..5314870, 5316752..5316864,5320151..5320257,5323621..5323757, 5325792..5325899,5328005..5328115,5328925..5329041, 5329920..5330091,5331483..5331751,5333285..5333421, 5335212..>5335382) /locus_tag="PAL_GLEAN10013370" /product="Transmembrane protease, serine 7" CDS join(5305990..5306227,5308222..5308352,5310162..5310229, 5311325..5311518,5313201..5313429,5314740..5314870, 5316752..5316864,5320151..5320257,5323621..5323757, 5325792..5325899,5328005..5328115,5328925..5329041, 5329920..5330091,5331483..5331751,5333285..5333421, 5335212..5335382) /locus_tag="PAL_GLEAN10013370" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Transmembrane protease, serine 7" /protein_id="ELK18160.1" /db_xref="InterPro:IPR000082" /db_xref="InterPro:IPR000859" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR002172" /db_xref="InterPro:IPR009003" /db_xref="UniProtKB/Swiss-Prot:Q8BIK6" /translation="MHFFFFKISNISVQVISAPGKLPGRPGRRPPRKPISRARPKKQS KKKAPFWNVQNKIILFTVFLFILAVIAWTLLWLYISKTESRDAFYFVGMFRITNIEFL PEHQQKESREFLSVARTVQQVVNLVYTTSAFSKFYKQSVVADVSSNNKGGLLVHFWIV FVMPHAKGHIFCEDCVAAILKDSIQTSIINRTSVGSLQGLAVDMDSVVLNDKGCSQYL NADHLSFRYPLEISATSGRLMCHFKLVATVGYLIRLSVESVQIEADNCVTDSLTIYDS LLPIRSTILYRICEPTRTLMSFVSTSNLMLVTFKSPQIRRLSGIRAYFEVIPEQKCEN TVLVKEITGFEGKISSPYYPSYYPPKCKCTWKFQTPLSTLGIALKFHNYSITKKSVKG CDHGWWEINEHMYCGSYMDHQTIFRVPSPLVHIQLQCSSRLSDKPLLVEYGSYNISQP CPVGSFRCSSGLCVPQAQRCDGVNDCFDESDELFCVTHKPACNASSFRQHGPLVCDGF RDCEDGQDEQNCTQSIPCNSRTFKCGNDICFRKQNAKCDGTVDCSDGSDEEGCSCSRS FSTVHRIIGGTDTREGGWPWQVSLHFIGSAYCGASVISREWLLSAAHCFHGNRLSDPT PWTAHLGMYVQGNAKFVSPVRRIVIHEYYNSQTFDYDIALLQLSVAWPETLRQLIQPI CIPPAGQKVRSGEKCWVTGWGRRHEADNKGSPVLQQAEVELIDQTLCVSTYGIITSRM LCAGVMSGKRDACRGDSGGPLSCRRESDGKWILTGIVSWGHGCGRPNFPGVYTRVSNF VSWIHKYVPSLL" assembly_gap 5321375..5321475 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5339945..5339974 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5341671..>5373676 /locus_tag="PAL_GLEAN10013371" mRNA join(<5341671..5341805,5347744..5347864,5356311..5356438, 5362185..5362255,5365425..5365606,5373624..>5373676) /locus_tag="PAL_GLEAN10013371" /product="TPA-induced transmembrane protein" CDS join(5341671..5341805,5347744..5347864,5356311..5356438, 5362185..5362255,5365425..5365606,5373624..5373676) /locus_tag="PAL_GLEAN10013371" /codon_start=1 /product="TPA-induced transmembrane protein" /protein_id="ELK18161.1" /db_xref="UniProtKB/Swiss-Prot:Q5BVD1" /translation="MEGARSPSPGNELELSELERHPDEETPLNGAAQVIPFSADPGPA QANPKSPQSSRNRKLIRKCLLWMVFIFLVLITVIISLFLIEVPSVDEDENEILELSSN KTFLVILKIPEECVAEEELPHLLTKRLTDVYSSSPSLSRYFTSVEVVDFSGENAAITY HLQFGVPSEDDGFLKYMMSEELVLGILLQDFHDRNMSGCETLGLGPESLLLYDVDSGH RLLPYSESDQC" assembly_gap 5351531..5351659 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5355977..5356011 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5377242..>5415869) /locus_tag="PAL_GLEAN10013372" mRNA complement(join(<5377242..5377559,5378014..5378042, 5399334..5399460,5401033..5401218,5405469..5405642, 5406067..5406165,5407324..5407449,5414417..5414565, 5415818..>5415869)) /locus_tag="PAL_GLEAN10013372" /product="Sodium/hydrogen exchanger 10" CDS complement(join(5377242..5377559,5378014..5378042, 5399334..5399460,5401033..5401218,5405469..5405642, 5406067..5406165,5407324..5407449,5414417..5414565, 5415818..5415869)) /locus_tag="PAL_GLEAN10013372" /codon_start=1 /product="Sodium/hydrogen exchanger 10" /protein_id="ELK18162.1" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR018490" /db_xref="UniProtKB/Swiss-Prot:Q4G0N8" /translation="MLLKKVTRNTVHAMKELGYLECDHPDIAVNMKTKEEINVMLNLA KEIIKVFRLKGILHKIEASEINKLIMDKKRELLDFQPITKAPTTLATLYHIPWLDKNK KHINFIKERAKIITYDCGNNIFEEGDEPKGIYIIISGMVKLKRSKPGLVIDHILQESE EKDNQIIYTDYMISGEIIGELNCLTNEPMKYSATCKTVVEDWTYKMQLKLCNINLKDI PKGTKTDIYDETVIYVILIHGAVEDCQLRKVYKAPFLIPITCHQIQGTEEITKVMIVQ TPIDAKNFRWSTRTYIPSRKPSIPKASLYEGTSSVTNQQDNADQNSAEELCYTLINHN ILMRRPSGTSAEGHYENVPHQAERPRKLLGRTETEYSLLHVPSTPRHPPFPEDEYEFL MPRSISSHTLQPPHLLMLPSEAHIFHL" assembly_gap 5412527..5412550 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5440332..5440639 /estimated_length=308 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5453264..5453852 /estimated_length=589 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5495476..5495632 /estimated_length=157 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5502789..5502830 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5528499..>5545568 /locus_tag="PAL_GLEAN10013373" mRNA join(<5528499..5528720,5537835..5537916,5540915..5541235, 5542635..5542670,5543595..5543867,5545414..>5545568) /locus_tag="PAL_GLEAN10013373" /product="OX-2 membrane glycoprotein" CDS join(5528499..5528720,5537835..5537916,5540915..5541235, 5542635..5542670,5543595..5543867,5545414..5545568) /locus_tag="PAL_GLEAN10013373" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="OX-2 membrane glycoprotein" /protein_id="ELK18163.1" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013151" /db_xref="InterPro:IPR013162" /db_xref="UniProtKB/Swiss-Prot:Q5RAL8" /translation="MGVLTRPQEGRGVRRCGLQEEREGAEPQSSLLVTGSSRNHSLEL KVRSLVRREIPCAFQVKLATPQPGARMEKRVFGRFFCHLSTYRLIWFLAAVTLCRAQV VTQDERELLNTPASLRCSLETSHEVLIVTWQKIKAVSPENMATFSKNHGVVVQTAYKD KINITELGLQSSTITFWNTTLDDEGCYKCLFNTFGSGKISGIACLTLFVRIDVGNLGI DAVQPTVVLNYKFFEDHLNITCSANARPAPVISWKVSGSGMDNSTEIFSHPNGTTSVT SVLQVKDPKSQVGKEVICQVLHLGTVTSFRQTVNKGFWFSVPLLLSIVSLIILLILIS ILLYWKRRRTQDRGESLQVVMTNKEGNK" assembly_gap 5541456..5541490 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5585560..5585598 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5600914..5600974 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5642344..>5671947) /locus_tag="PAL_GLEAN10013374" mRNA complement(join(<5642344..5642616,5645668..5645714, 5647259..5647399,5671860..>5671947)) /locus_tag="PAL_GLEAN10013374" /product="B- and T-lymphocyte attenuator" CDS complement(join(5642344..5642616,5645668..5645714, 5647259..5647399,5671860..5671947)) /locus_tag="PAL_GLEAN10013374" /codon_start=1 /product="B- and T-lymphocyte attenuator" /protein_id="ELK18164.1" /db_xref="UniProtKB/Swiss-Prot:Q7Z6A9" /translation="MKTSPAMLGTGKLFSVLFLIPHLGIWNIDDTTSALEPPSKEQME DRRWILYSLLPLGGLPLLITCFCLFYCLRKHQGKQKEPSDTEEREINLIDVPQPFRSE QTELSTRQNSQTLPDTRIYDNDPCFKVQEESEVHSKPCLEENKQGIVYASLNHSVIGM NPRQARNMKEAPTEYAAICVRS" assembly_gap 5646508..5646546 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5706486..>5734440) /locus_tag="PAL_GLEAN10013375" mRNA complement(join(<5706486..5706567,5708186..5708254, 5710370..5710497,5711248..5711403,5711640..5711674, 5715581..5715662,5718007..5718056,5721561..5721668, 5723053..5723123,5727798..5727847,5731629..5731670, 5734116..5734181,5734369..>5734440)) /locus_tag="PAL_GLEAN10013375" /product="Autophagy-related protein 3" CDS complement(join(5706486..5706567,5708186..5708254, 5710370..5710497,5711248..5711403,5711640..5711674, 5715581..5715662,5718007..5718056,5721561..5721668, 5723053..5723123,5727798..5727847,5731629..5731670, 5734116..5734181,5734369..5734440)) /locus_tag="PAL_GLEAN10013375" /codon_start=1 /product="Autophagy-related protein 3" /protein_id="ELK18165.1" /db_xref="InterPro:IPR007134" /db_xref="InterPro:IPR007135" /db_xref="InterPro:IPR019461" /db_xref="UniProtKB/Swiss-Prot:Q0VCL3" /translation="MQNVINTVKGKALEVAEYLTPVLKVNLEPRSVRTPVTPHPSEQH FWESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVP CYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAGITEAVKEITLESKDSVKLQD CSALCEEEEEEDEGEAADMEEYEESGLLETDEATLDTRKIAEACKAKTDAGGEDAILQ TRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLP PPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYTRHF TM" gene <5735938..>5752409 /locus_tag="PAL_GLEAN10013376" mRNA join(<5735938..5736109,5739904..5740002,5741273..5741406, 5743917..5743984,5750175..5750955,5752341..>5752409) /locus_tag="PAL_GLEAN10013376" /product="Putative UDP-sugar transporter protein SLC35A5" CDS join(5735938..5736109,5739904..5740002,5741273..5741406, 5743917..5743984,5750175..5750955,5752341..5752409) /locus_tag="PAL_GLEAN10013376" /note="GO_component: GO:0000139 - Golgi membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005351 - sugar:hydrogen symporter activity [Evidence IEA]; GO_process: GO:0008643 - carbohydrate transport [Evidence IEA]" /codon_start=1 /product="Putative UDP-sugar transporter protein SLC35A5" /protein_id="ELK18166.1" /db_xref="InterPro:IPR007271" /db_xref="UniProtKB/Swiss-Prot:Q5R4D7" /translation="MNLLFYLRQLENSGMERKCCGHPMLCSLSTMYTFLLGAIFIALS SSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVLVSFWVIKKENHQSRNLRCAS WREFSNFMKWSIPAFLYFLDNLIVFYVLSYLQPAMAVIFSNFSIITTALLFRIVLKRH LNWIQWASLLILFLSIVSLTAGTETSQHNLAGHGFHHDAFFSPSNSCLLFRSECPRRD NCTAKEWTFIDAKWNTTARVFSHIRLGLGHILIIVQCFTSSMANIYNEKILKEGNQLT ESIFIQNSKLYFFGILFNGLTLGLQSSNRDQIKNCGFFYGHNAFSAALIFVTAFQGLS VAFILKFLDNMFHVLMAQVTTVIITTVSVLVFDFQPSLEFFLEAPSVLLSIFIYNASK TQDKEFAPRQERIRDLSGRLWERSSGDGEELERLTKPKNAIESDEDTL" gene complement(<5763711..>5967890) /locus_tag="PAL_GLEAN10013377" mRNA complement(join(<5763711..5764057,5765121..5765201, 5767561..5767664,5773527..5773675,5775360..5775496, 5787076..5787232,5794284..5794396,5927547..5927795, 5967358..5967606,5967653..>5967890)) /locus_tag="PAL_GLEAN10013377" /product="Coiled-coil domain-containing protein 80" CDS complement(join(5763711..5764057,5765121..5765201, 5767561..5767664,5773527..5773675,5775360..5775496, 5787076..5787232,5794284..5794396,5927547..5927795, 5967358..5967606,5967653..5967890)) /locus_tag="PAL_GLEAN10013377" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Coiled-coil domain-containing protein 80" /protein_id="ELK18167.1" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013162" /db_xref="UniProtKB/Swiss-Prot:Q76M96" /translation="MTWEIILRDKPPCTRAYRRDTNETRELNCTDKRITWAFRPDQTS TLQIDPVAIAHDGYYGCQMATPDGNFHVRYHLQVSVAPEVTLFQSKNKTVVCKAIAGK PAAQISWTPEGDCVTEQEYLDNGTVTVQSTCHWADSDVSTVSCSVSHWTGNKSRSIDL SQVAPEVTLFQSKNKTVVCKAIAGKPAAQISWTPEGDCVTEQEYLDNGTVTVQSTCHW ADSDVSTVSCSVSHWTGNKSQSIELSQGKTEHDGYLKPTTKHFTQSPKKLVTDLLGSF EGKRRLLLITAPKVENNMYVQQRDEYLESFCKMATRKISVITIFGPVNNSTMKIDHFQ LDNEKPMRVVDDEDLVDQQLISELRKEYGMTYDDFFMVLTDVDLRVKQYYEVPIAIKS VFDLIDTFQSRIKDMEKQKKEGIVCKEDKKQSLENFLSRFRWRRRLLVISAPSDEDWA YSQQLSALSGQACNFGLRHITILKLLGVGEEVGGVLELFPINGSSVVEREDVPAHLVK DIRNYFQVSPEYFSMLLVGKDGNVKSWYPSPMWSMVIVYDLIDSMQLRRQEMAIQQSL GMRCPEDEYAGYGYHSYHRGYPEGYQDDYHHHEGYHHGYPY" assembly_gap 5769537..5769547 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5778836..5778851 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5817427..5819492 /estimated_length=2066 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5828188..5828266 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5885134..5885168 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5920149..5920255 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5927824..5928307 /estimated_length=484 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5961493..5961542 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5963295..5964325 /estimated_length=1031 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6006682..>6019475 /locus_tag="PAL_GLEAN10013379" mRNA join(<6006682..6007017,6009174..6009272,6011404..6011534, 6012503..6012602,6014298..6014416,6019394..>6019475) /locus_tag="PAL_GLEAN10013379" /product="GTP-binding protein 8" CDS join(6006682..6007017,6009174..6009272,6011404..6011534, 6012503..6012602,6014298..6014416,6019394..6019475) /locus_tag="PAL_GLEAN10013379" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]" /codon_start=1 /product="GTP-binding protein 8" /protein_id="ELK18168.1" /db_xref="InterPro:IPR002917" /db_xref="UniProtKB/Swiss-Prot:Q0P5E7" /translation="MAAPRLLPGMGKLFEMPAMLGRVSRPHSTSHAFAEVLRLPKRQL TKLVFPLQEFERHLLQDSGSDLHLKTFHPSLEDIARAEGFFTATARNRIEYLSSAERL DHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKYF TLVDMPGYGYRAPEDFVDMVETYLKERKNLMRTFLLVDSVVGIQKADNIAIEMCEEFA LPYVMVLTKIDKSSKGHLLKQVLQIQKFIDTNTQGCFPQLFPVSAVTYSGIHLLRCFI ANITGNLKTNGT" gene complement(<6021867..>6034674) /locus_tag="PAL_GLEAN10013380" mRNA complement(join(<6021867..6022329,6024519..6024778, 6026833..6026894,6034572..>6034674)) /locus_tag="PAL_GLEAN10013380" /product="hypothetical protein" CDS complement(join(6021867..6022329,6024519..6024778, 6026833..6026894,6034572..6034674)) /locus_tag="PAL_GLEAN10013380" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18169.1" /db_xref="UniProtKB/Swiss-Prot:Q6NW34" /translation="MAVVLPGPEPWNRVRIPRPGSRSAVTVQDPGVALEKSTEFDLRA FCKQLKHKAIQEASSEFKCPKSQLKATKNSSQKATGTPCAQSFVQRFQEAETFIQLSE EIQMAILWCRSKKLKAQASFLGNKLLKSNRLKHVEAQGYSLPKKLECLKTSICNCLLR GLGSKTSKHQLRQRRSQSKFLLRQRKPQRKLQSTLLKEMQQSPHGTQNATDTSKQRLS HHAVHRTNLHPNSNQLLSSRVSNPVIQTKEKQSHETLTGSKENETDLRTMMQINKHNT SETIKEINDIDDIFALMGV" assembly_gap 6071299..6071330 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6077230..6078011 /estimated_length=782 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6110697..6110730 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6121427..>6121720) /locus_tag="PAL_GLEAN10013381" mRNA complement(<6121427..>6121720) /locus_tag="PAL_GLEAN10013381" /product="Heat shock cognate 71 kDa protein" CDS complement(6121427..6121720) /locus_tag="PAL_GLEAN10013381" /codon_start=1 /product="Heat shock cognate 71 kDa protein" /protein_id="ELK18170.1" /db_xref="InterPro:IPR013126" /db_xref="UniProtKB/Swiss-Prot:P19378" /translation="MTKDNNLLGKFELTGIPCAPRGVPQIEVTFDIDANGILNVSAVD KSTGKENKITITNDKGCLSKEDIKCMVQEAEKYKAEDEKKWDKASHSNLMHST" assembly_gap 6123321..6123368 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6129460..6129469 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6139593..6140253 /estimated_length=661 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6145860..6145890 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6146739..6146772 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6156507..6156645 /estimated_length=139 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6176693..6176761 /estimated_length=69 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6182561..6182626 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6183371..6183435 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6183867..6183880 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6201969..6202009 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6216830..6216855 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6218915..>6254054 /locus_tag="PAL_GLEAN10013382" mRNA join(<6218915..6218996,6219667..6219945,6236104..6236250, 6238233..6238376,6239867..6240160,6240493..6240665, 6242136..6242294,6245653..6245812,6246214..6246324, 6246825..6247031,6247388..6247569,6247970..6248075, 6248442..6248564,6250744..6250965,6251708..6251943, 6252168..6252244,6252762..6252952,6253867..>6254054) /locus_tag="PAL_GLEAN10013382" /product="Brother of CDO" CDS join(6218915..6218996,6219667..6219945,6236104..6236250, 6238233..6238376,6239867..6240160,6240493..6240665, 6242136..6242294,6245653..6245812,6246214..6246324, 6246825..6247031,6247388..6247569,6247970..6248075, 6248442..6248564,6250744..6250965,6251708..6251943, 6252168..6252244,6252762..6252952,6253867..6254054) /locus_tag="PAL_GLEAN10013382" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Brother of CDO" /protein_id="ELK18171.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:Q9BWV1" /translation="MMTQRRKRPEVTLTYLLLATAGCFANLNELPQVTVQPSSTVQKL GGTVILGCVVEPPGMNTTWRLNGKELNGSDDALGVLITHGTLVITALNNRTVGRYQCV ARMPAGAVASVPATVTLANLQDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSV KQEWLEASRDNYLIMPSGNLQIVNASQEDEGMYKCAAYNPVTQEVKTAGSSDRLRVRR STAEAARIIYPPEAQTIIVTKGQSLILECVASGIPPPRVTWAKDGSSVASYNKTRFLL SNLLIDTTSEEDSGTYRCMADNGVGEPGAAVILYNVQVFEPPEVTVELSQLVIPWGQS AKLTCEVRGNPPPSVLWLRNAVPLTSSQRLRLTRRALRVCPGEKGQVAPAEAPIILSS PRTSKSDSYELVWRPRHEGGSRAPILYYVVKHRKVTNSSDDWTISGIPASQHRLTLTR LDPGSLYEVEMAAYNCAGEGQTAMVTFRTGRRPKPEILASKEQQIQRDDPGASLQSSS QPDHGRLSPPEAPDRPTISMASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWIL ATSAIPPSLLSVEITGLEKGTSYKFRVRALNMLGESEPSAPSRPYVVSGYSGRIYERP VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEG DRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARKSSGQPGRPPPPTLAP PQPPPPETIERPVGTGAMVARSSDLPYLIVGVVLGSVVLIIVAFIPFCLWRAWSKQKH TTDLGFPRSALLSSSCQYTMVPLGGLPGHRANGQPYLSGTNGRTCANGVHVNRGCPAT ALGYAGMRPQQHCPGELQQQDDTNSLLRQTILGNGYGVHSHQIPRGTKADPDEGSYLY TLPDDSTHQLLQTHQDCHLQEQPAAASQSGMRSVPQNPGPEVTWDPLFHPGPPCCLGL VPVEEVDSPESCQVGGGEWCPQHPTGAYTGQELGLRLSPSPPVHVSFETPPPRI" gene complement(<6255954..>6361436) /locus_tag="PAL_GLEAN10013383" mRNA complement(join(<6255954..6256127,6257727..6257861, 6259085..6259245,6262987..6263188,6264374..6264490, 6265858..6265988,6268430..6268540,6277419..6277614, 6278589..6278792,6282198..6282698,6284570..6284747, 6292252..6292423,6299233..6299429,6304965..6305095, 6306219..6306381,6306542..6306597,6308951..6309221, 6309836..6309981,6315080..6315526,6315649..6315885, 6334252..6334362,6334979..6335188,6338340..6338434, 6339001..6339100,6340178..6340333,6342179..6342343, 6345005..6345119,6346779..6346995,6351855..6351957, 6355750..6355912,6357313..6357472,6357994..6358149, 6361337..>6361436)) /locus_tag="PAL_GLEAN10013383" /product="WD repeat-containing protein 52" CDS complement(join(6255954..6256127,6257727..6257861, 6259085..6259245,6262987..6263188,6264374..6264490, 6265858..6265988,6268430..6268540,6277419..6277614, 6278589..6278792,6282198..6282698,6284570..6284747, 6292252..6292423,6299233..6299429,6304965..6305095, 6306219..6306381,6306542..6306597,6308951..6309221, 6309836..6309981,6315080..6315526,6315649..6315885, 6334252..6334362,6334979..6335188,6338340..6338434, 6339001..6339100,6340178..6340333,6342179..6342343, 6345005..6345119,6346779..6346995,6351855..6351957, 6355750..6355912,6357313..6357472,6357994..6358149, 6361337..6361436)) /locus_tag="PAL_GLEAN10013383" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="WD repeat-containing protein 52" /protein_id="ELK18172.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011047" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR019781" /db_xref="InterPro:IPR019782" /db_xref="UniProtKB/Swiss-Prot:Q96MT7" /translation="MKEPDDQDTDRRESDRSRSSRRQSLKSSQSAPRASIKEDDRILE DTTNETFSEEEESYVEEDDSYVEHLERSSSSIQDDYVESTGKSQYMETPHSAEEEAEK EVKKKISQSFFYDYKELVSMPFVTPDSNIPLDLLTLVHSFGYDCRRRANLQLLDSNTV AYIAGNQLILLNLKTKEQFYLRSSSGRGIGVIGVHPDKTYFTVAEKGVSPKIIIYEYP SLKPYRILRDGTDLAYAYVDFNCDGTLLASIGGNPDHTLTIWNWKEEQPILRTKAFSQ EVFKVTFNPDNDEQLTTSGSGHIKFWEMALTFTGLKLQGSLGRFGKTATTDIEGYMEL PDGKVLSGSEWGNMLVWEAGLIKVELCRAGNISCHQGPINQIMLDEGEVITVGSDGCI RIWDFETIDTADAIDESGLIEIEPINELQVDKNVKLFSMIKMNETGHNFWLAQTQDPE CLFHFHSGAIEALVVSPITYLMATTGLDCSIRIYDFASKTPLSHVKFKQGGTALAWVP RLISYTGAQIIVGFEDGVVRILELYDPKGLTIFAGRKKFLDADLHLKYVFKPHTAHIT ALAYERDGEILATGSKDKTVFFFDVEKDYKPIGFITTPGPVCQLVWSTASHRLIEIEK RKKQKELKEKEKEERRKQLAATMGEDGEKEFHEEEEEEEEEEEPLPEIFIPSTPCHIL CGFYSGPGKFWVSLTVLKGSGLRGGGQSGDEGQDDKMMDGHGHPKGALASRAPGSPRQ QRRLHFTMIPKGAGGARWPETQEQTDRQTMCSGLPQSLHHTLGPGLRRPPAASAQSVQ GKGNKEERRGTQGSAGRWLPRAGVDEEDQEPLIPFLILCWLWRDFLGDGYDAGFLYHC EFPTYDKNSDITEKKDEPFDFRFLEDTEDNPIHTITFSINQDMMFCGMQDGAIRVYIL NENDLSLKNMENYWHFNIHDSTYGCIKGISTSFDDRFLVTAGADSNIFVFSIFPEFEL RKGIKAKVPSARFGIETEPIPEDIEDPKAYSIEDARKKREHDKLMKEVEEIKAGKREQ LRALRNEFQKLLQMNEELPEHMQFKRTDFDLDSKIRAEINRKTVHKIQQVEKELAWEK EKHQLGLMKLQNRFRDSLQSDAIVVHAIQSDHKIASYRLMKPSKYFRAKQASQSERRP SKMERFDKEGVGKQESQKDKGGTVGMPEEIIEKGKEFRPKTLSQIMVENQIEKTRKLI LKAERAQFKIQQRKKEWEELYKSKPADDYEDPKDVQAIKEAQMYMGDFNLKTAPDYKI PEHMRINAAKKEEELGHLDSMTHTKKMNMNKCIVSLRDLKVAVIEEIQCLVQELKNIQ STLHISKHIPIPQIPQIHPEEVPEKRFHYDEQTLQTFKLQNTERKSEKTPQMEQAVSI GQSGGFLRLSSGKDGDLTTRDSVSRSSKASSFGLDNTKLIEFEKADPSDVELEIMRRD EIKNIYMQQYLTNRIKELTITFDAELHLLRHQKLKLDTQMKLSDLHHVTLFQEILLLK NFEKQENILQERVNSLDKEEQDMQWKINETLKEMEEKKNEINKLQEQEKALYAGFQTA LGENNKFANFLMKVLKKRIKRVKKKEVEGDADEDEDSDESSEEESSLESDEDESGSEA EVFDDSICPTNCDVGLFELALQLREKRLDIEEALVEEKKIIDNLKKEYDTLSKKVKII ATNLNAAEEDLEAYQREKQQRLNELLVVIPLKLHQIEYVVFGEIPSDLSGTLVFSNRS LGQLQDRIVQLHEENSKQQKINKEFRERRKQLIREKREMAKTIQKMEETVRQLMISKF GRVIDLEALQTLSVNTTLEELKIRKLRKELLNAKEIKMWEEKIAQVRWELMMKTKEHT KKLHQMNDLCIEKKKLDSRLNTLQNQQGNAFQGPRKADTVAREKVTQLIHFQAERILA LKEEIALLRKKGGLILPPIQTPQENR" assembly_gap 6266783..6267317 /estimated_length=535 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6350005..6350172 /estimated_length=168 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6374969..>6440015) /locus_tag="PAL_GLEAN10013384" mRNA complement(join(<6374969..6375022,6376226..6376313, 6377298..6377400,6379749..6379932,6381610..6382100, 6387481..6387705,6388611..6388755,6392776..6392907, 6394488..6394753,6395117..6395254,6395462..6395604, 6418180..6418298,6420267..6420373,6421408..6421510, 6425665..6425808,6429047..6429094,6439992..>6440015)) /locus_tag="PAL_GLEAN10013384" /product="Coiled-coil domain-containing protein 52" CDS complement(join(6374969..6375022,6376226..6376313, 6377298..6377400,6379749..6379932,6381610..6382100, 6387481..6387705,6388611..6388755,6392776..6392907, 6394488..6394753,6395117..6395254,6395462..6395604, 6418180..6418298,6420267..6420373,6421408..6421510, 6425665..6425808,6429047..6429094,6439992..6440015)) /locus_tag="PAL_GLEAN10013384" /codon_start=1 /product="Coiled-coil domain-containing protein 52" /protein_id="ELK18173.1" /db_xref="UniProtKB/Swiss-Prot:Q2T9X8" /translation="MELYMKVKSTVNDLTVHRATPEDLIRRHEIHKSKNRSLVHWELQ EKALKRKWKKQKPEISNLEKRRLSIMKEILSDQYQMQDVLEKSDHLMAAAKDLFVDFP RRRTGFPNVTMAPDSSQSPIVVNQDPVTQAILSESVIEPQALNELDDGEEEEETVNSQ SEESENELDNSLNSQSTMHADRFLHQLKEDNSDLINRLWTDIQQKIATQSQITSPPGI PSPAPSSQEQKAALNATNAVRRVRTRLQPEESIQSLDSNHVVGQVLNSRKQKQLSNKV KRKPDLHSPSKQKNTMLSASTASTDLSNSNNPSLDVLKHMIHEVEHEMEEYERWTGRE VKGPQSSQGLTGFTLSLVSSLCRLVRYLKESELQLRKEVETRQKLEQVLGDHRELIDA LTAEILLLREENTATQARLQQYMVTTDEQLISLTHAIKSCPVINNKESLALERGTMSR RIMDNPEDPVVNADVSVPLMFRGEDMLEFPQEDLPVKLSQVPNPPDSANLANNFPAHV FEPAVLLTPPRQKSNSEFSPLQDVLRRTVQTRPAPRIPPTVEIIEKEQNWEEKTLPIS TDIQNSSEESHLFTQRWRVSHMGEDLENKTQAPFVGFSQPLCNSHSDTQQTRNPTFSE GPSVLGDGQQLRTNEALIQRKDIMARIAELTLQNSAIKAHLNNIIGPGGEQGDGLREL NKQETSRTSDMTANFPAAQPLTPSSMEERIAELNRQSMEARGKLLQLIEQQKLIGLNP SSPPVSPIQSPLRAWTEGGKRTIEVSIPGVEASESSKCSTISPTSGINTRRSSGATSN SCSPLNATSGSGRFTPVNPRAKIEKQNEEGWFALSTHVS" assembly_gap 6396163..6403209 /estimated_length=7047 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6407134..6407152 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6416257..6416266 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6475172..>6528737 /locus_tag="PAL_GLEAN10013385" mRNA join(<6475172..6475362,6476371..6476541,6486394..6486439, 6489601..6489702,6490568..6490651,6492277..6492364, 6493532..6493603,6494024..6494117,6500420..6500463, 6507990..6508061,6509411..6509556,6511018..6511091, 6512078..6512144,6513556..6513629,6514672..6514795, 6514994..6515111,6517724..6517860,6518526..6518634, 6523231..6523307,6524234..6524280,6525824..6525929, 6526024..6526134,6527121..6527234,6528675..>6528737) /locus_tag="PAL_GLEAN10013385" /product="SID1 transmembrane family member 1" CDS join(6475172..6475362,6476371..6476541,6486394..6486439, 6489601..6489702,6490568..6490651,6492277..6492364, 6493532..6493603,6494024..6494117,6500420..6500463, 6507990..6508061,6509411..6509556,6511018..6511091, 6512078..6512144,6513556..6513629,6514672..6514795, 6514994..6515111,6517724..6517860,6518526..6518634, 6523231..6523307,6524234..6524280,6525824..6525929, 6526024..6526134,6527121..6527234,6528675..6528737) /locus_tag="PAL_GLEAN10013385" /codon_start=1 /product="SID1 transmembrane family member 1" /protein_id="ELK18174.1" /db_xref="UniProtKB/Swiss-Prot:Q9NXL6" /translation="MMCVHVCVCVGVMRMTSVCPGSQVNAVRVYVNSSSENLDYPVLV VVRQQKGVLSWQVPLLFQGLYQKSYNYQEVSRTLCPSEATNETGPLEQLIFVDVASMA PLGAQYKLLVTKIKHFQLQTNVDFHFTASPSQPQYFLYKFPEDVDSVIIKVVSEMAYP CAVVSIQNINCPVYDLDHNVEFDGVYQSMTKKAAITLQKKDFPDEQFFVVFVIKPEDY ACGGSFFTQEKKNQTWNLQRTKNLKVTIVPSIKESVFVKSILLSFLIFFSFYLGCLLI AFVHYIRFQRKSINGGFGSNDGSGNMAVSHPIAASTPEGSNYGAIDESNSSPGRQMSS SDGGKPCQSDTDSSVEESDFDTMPDIESDKNIIRTKMFLYLSDLSRKDRRIVSKKYKI YFWNIITIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGVLSAFNNILSN LGHVLLGFLFLLVVLRRDILHRRALEAKDIFAMEYGIPKHFGLFYAMGIALMMEGVLS ACYHVCPNYSNFQFDTSFMYMIAGLCMLKLYQTRHPDINASAYAAYASFALVITLTVL GVVFGKNDVWFWVIFSAIHILASLALSTQIYYMGRFKIDLGIFRRAAMVVYTDCIQQC SRPLYMDRMVLLIVGNLVNWSFALFGLIYRPRDFASYMLGIFICNLLLYLAFYIIMKL RSSEKVLPIPFFCIIATAVVWAAALYFFFQNLSSWEGTPAKSREKNRECILLDFFDDH DIWHFLSATALFFSFLVLLTLDDDLDVVRRDQIPVF" assembly_gap 6482303..6482346 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6543886..>6546060) /locus_tag="PAL_GLEAN10013386" mRNA complement(<6543886..>6546060) /locus_tag="PAL_GLEAN10013386" /product="Basic helix-loop-helix domain-containing protein KIAA2018" CDS complement(6543886..6546060) /locus_tag="PAL_GLEAN10013386" /codon_start=1 /product="Basic helix-loop-helix domain-containing protein KIAA2018" /protein_id="ELK18175.1" /db_xref="UniProtKB/Swiss-Prot:Q68DE3" /translation="MQKKRNLVQGAQASQLSLQPKHHGTDQSRPKSGQPHPHHQQIQQ QMQQHFGSSQPEKSCENPSTSRNHHNHPQNHINQDIMHQQQDVGSRQQGSGVSSEHVS GHNPMQRLLTSRGIEQQMVSQPSIVTRPSDMTCTPHRPERNRVSSYSAEALIGKTSSN SEQRMGILIQGSRVSDQLEMRSYLDVPRNKSLAIHNMQGRVDHTVASDIHLSDCQTFK PSGASQQPQSNFEVQSSRNNEIGNPVSSLRSMQSQAFRISQNPGPPPIDRQKRLPYPP VQSIPTGNAIPPRDSENTCHQSFMQSLLAPHLGDQVIGSQRSLSEHQRNTQCGPSPAI EYNCPPAHESVHIRRENENQNRESCDMSLGAINTRNSTLNIPFSSSSSGDIQGRNTSP NVSVQKSNPMRITDSHGTKGHMNPPVTTNMHGVARPALPHPSVSHGNTDQGPPVRQTS SSVPQRSRHPLQDSSGSKIRQPERNRSGNQRHSNVFDPSLPHLPLSTSGSMILGRQQP TTEKRGSIVRFMPDSPQVPNDNSVPDQHTLSQNFGFPFIPEGGMNPPINANTSFIPQV TQPSATRTPALIPVDPQNTLPSFYPPYSPAHPTLSNDISIPYFSNQMFSNPSTEKVNS GSLNNRFGSILSPPRPVGFAQPSFPLLPDMPPMHMTNSHLSNFNMTSLFPEIATALPD GSAMSPLLTIANSSASDSSKQSSNRPAHNISHILGHDCSSAV" assembly_gap 6546352..6546616 /estimated_length=265 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6546618..>6560693) /locus_tag="PAL_GLEAN10013387" mRNA complement(join(<6546618..6551110,6553458..6553554, 6557892..6557974,6559547..6559575,6560647..>6560693)) /locus_tag="PAL_GLEAN10013387" /product="Basic helix-loop-helix domain-containing protein KIAA2018" CDS complement(join(6546618..6551110,6553458..6553554, 6557892..6557974,6559547..6559575,6560647..6560693)) /locus_tag="PAL_GLEAN10013387" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Basic helix-loop-helix domain-containing protein KIAA2018" /protein_id="ELK18176.1" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR011598" /db_xref="UniProtKB/Swiss-Prot:Q68DE3" /translation="MPEMTENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGEL IPCSPALKQSKNMILDQAFKYITELKRQNDELLLNGGNNEQAEEIKKLRKQLEEIQKE NGRYIELLKANDICLYDDPTIHWKGNLKSSKVSVVIPSDQVQKNIIVYSNGSQPGGNS QGTAVQGITFNVGHNLQKQTANVVPVQRTCNLVTPVSISGVYPSENKPWHQTTVSALA ANQPVPLCLPATISTQNILELSTSESESSVLGATSGSLIAVSVGPEPPQHRSLHTSLN DQNSSENKNGQESPKLLNKTVPCATNIPSSSSATATKVNYGGKSCLSIQDFTSDFQTT FVVSVTTTICSQPPRSAGDSCPVVISKGADSTSVTTVVAPSAPGGGKTTTSVGSLSAN PLDNSWTLSCSLPSSAVSASDLKNINSLTRISSAGNTQTTWTTLQLAGNTIQPLSQTP SSALTPVLNESGTSPTTTSRSRHVATGINLNNSFPVDGQPVEQVVVTLPSCPSLPMQP LIAQPQVKSQPPKNILPLNSAMQVIQMAQPVGSAVNAAPANQNVIILQPPSTTPCPTV MRAEVPNQTVGQQIVIIQAANQNPLPLLSAPPPGSIRLPVNGASAIIGSNSMQNISTP QTFGGKHLVHILPRPSSLSTSNSTQTFSVTMSNQQQPQTISLNGQLFALQPVMSSSGT TNQTPMQIIQPTTSEDPNTNVALNTFGALASLNQSISQMAGQSCVQLSVSQPANPQTA ANGQTTPANCVSLTATVASPMTTDNSATLPSIYNLVTTPSVNTVAGLPNVKSKRLNKK PGVKKHLVANKSVCSLNPVRDVGKADCPSTEGLAGPPCNDGLLESPPVVLPSVTMSQA KSTVSVSGSHSLDVPNSESAIPESVPKSKSAEESSLSSQESVTSEHFAMTPAKSKDSA PVLQRETSQDKPPTSLALPDTAKSCTSANVLIPSPSDAHILVSQVSGLSSTMSTVSTD CVSEVEIIAEPCRVEQDSSDTMQTTGLLKGQGLTALLSGFAKEKDPQKSLSVQVDHPD FSSENSKTVDSSVDLHPKQDLLLMSSDDRDPGQHPSCISDQEVIHGSLLTSRQTDSPM STSSGSSRSFSVASMLPETTREDVTSNATTNTCDSCTFVEQTDIVALAARAIFDQENL EKGRAGTQADLREVTSKPSEASSLEGDQPFKAQTSKDNGPGQAEATPNEFNSQESIEV TMDRPLEKSSCSAGIKTSTASLQVSTSQPPSITSLSVNNLIHQSSISHPLVSCAGLSQ TSEQTTIPATVNLTVSSTSYGNQPPGPSLMTEYSQEQLNTMTGTIPNPQIQEPLLKPG HESRKDSAKRAVQDDLLLSSAKRQKHCQPAPLRLEGMSLMSQTPDNISDQTQMMVSQI PPNSSNSVVPISNPAHGDGLTRLFPPSNNFLAPALRQTEVQCSSSVAEQQQTQAGQHL QALQQHVPAQGVSHLHSNHLYLKQQQQQQQQQQQQQQQQQQQQQQQAGQLRERHHLYQ LQHHIPHAETSVHSQPHNVHQQRTLQQEVQMQKKRNLVQGAQASQLSLQPKHHGTDQS RPKSGQPHPHHQQIQQQMQQHFGSSQPEKS" assembly_gap 6563109..6563136 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6577998..6578381 /estimated_length=384 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6592811..>6602508) /locus_tag="PAL_GLEAN10013388" mRNA complement(join(<6592811..6592988,6594434..6594500, 6594890..6595009,6595440..6595576,6602384..>6602508)) /locus_tag="PAL_GLEAN10013388" /product="N-acetyltransferase NAT13" CDS complement(join(6592811..6592988,6594434..6594500, 6594890..6595009,6595440..6595576,6602384..6602508)) /locus_tag="PAL_GLEAN10013388" /note="GO_function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="N-acetyltransferase NAT13" /protein_id="ELK18177.1" /db_xref="InterPro:IPR000182" /db_xref="InterPro:IPR016181" /db_xref="UniProtKB/Swiss-Prot:Q5RF28" /translation="MNSISSSVGLVLKCLTSSAALSELARDMLAGLGVKIPGSPWSSR IELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRV DHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAI DFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQNADVHKTDN" assembly_gap 6598413..6598436 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6613290..6613305 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6617113..6617126 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6618663..6618682 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6635605..>6664366 /locus_tag="PAL_GLEAN10013389" mRNA join(<6635605..6635689,6637692..6637820,6640160..6640374, 6640629..6640766,6642198..6642349,6645878..6646040, 6646576..6646684,6650780..6650902,6650998..6651112, 6653092..6653227,6658173..6658267,6662348..6662519, 6664274..>6664366) /locus_tag="PAL_GLEAN10013389" /product="V-type proton ATPase catalytic subunit A" CDS join(6635605..6635689,6637692..6637820,6640160..6640374, 6640629..6640766,6642198..6642349,6645878..6646040, 6646576..6646684,6650780..6650902,6650998..6651112, 6653092..6653227,6658173..6658267,6662348..6662519, 6664274..6664366) /locus_tag="PAL_GLEAN10013389" /note="GO_component: GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA]; GO_component: GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO_function: GO:0046933 - hydrogen ion transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO_function: GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO_process: GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO_process: GO:0015992 - proton transport [Evidence IEA]; GO_process: GO:0046034 - ATP metabolic process [Evidence IEA]" /codon_start=1 /product="V-type proton ATPase catalytic subunit A" /protein_id="ELK18178.1" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR000793" /db_xref="InterPro:IPR004100" /db_xref="InterPro:IPR018118" /db_xref="UniProtKB/Swiss-Prot:P31404" /translation="MMDFSKLPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELV RVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDG IQRPLSDISSQTQSIYIPRGVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVNEN SLIRHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGIKEKFSMVQIWPVRQVRPV TEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYV GCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITL SEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGR VKCLGNPEREGSVSIVGAYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIV QLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMA RRAVETTAQSDNKITWAIIREHMGEILYKLSSMKFKDPLKDGEAKIKADYAQLLEDMQ NAFRSLED" assembly_gap 6644301..6644311 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6658395..6658413 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6671960..6672740 /estimated_length=781 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6687995..>6722284 /locus_tag="PAL_GLEAN10013390" mRNA join(<6687995..6688021,6692852..6693001,6705838..6705922, 6711028..6711131,6711724..6711819,6717002..6717082, 6722225..>6722284) /locus_tag="PAL_GLEAN10013390" /product="GRAM domain-containing protein 1C" CDS join(6687995..6688021,6692852..6693001,6705838..6705922, 6711028..6711131,6711724..6711819,6717002..6717082, 6722225..6722284) /locus_tag="PAL_GLEAN10013390" /codon_start=1 /product="GRAM domain-containing protein 1C" /protein_id="ELK18179.1" /db_xref="InterPro:IPR004182" /db_xref="UniProtKB/Swiss-Prot:Q5RC33" /translation="MEGPLTVRQVINEGDSSFAPESQEELEENPSPVVDENNIASAKK QGPHLHNWSGDWSFWISSSTYKDRNEEYKRQFTHLPDTEKLIADYACALQRDILLQGR LYLSENWLCFHSNIFRWETTISIALKNITFMTKEKTARLIPNAIQIITEGEKFFFTSF GARDRSYLSIFRLWQNALLDKCFPGVDTVWTLRLFGLNGF" assembly_gap 6692178..6692230 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6694067..6694077 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6698773..6698824 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6716749..6716823 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6722510..>6761727 /locus_tag="PAL_GLEAN10013391" mRNA join(<6722510..6722767,6732301..6732419,6735127..6735263, 6738380..6738529,6744866..6745003,6749638..6749756, 6751151..6751293,6752062..6752165,6753505..6753681, 6754526..6754583,6756254..6756364,6756575..6756680, 6761647..>6761727) /locus_tag="PAL_GLEAN10013391" /product="GRAM domain-containing protein 1C" CDS join(6722510..6722767,6732301..6732419,6735127..6735263, 6738380..6738529,6744866..6745003,6749638..6749756, 6751151..6751293,6752062..6752165,6753505..6753681, 6754526..6754583,6756254..6756364,6756575..6756680, 6761647..6761727) /locus_tag="PAL_GLEAN10013391" /codon_start=1 /product="GRAM domain-containing protein 1C" /protein_id="ELK18180.1" /db_xref="UniProtKB/Swiss-Prot:Q8IYS0" /translation="MSLSWRLDTLPHPEPHALAPGWGDARCCGPVGVGTSNTLESLEP LHKGVRPHDSTPAFQVALQEASSPYPTTPYRSASFRCIVIITSLTRQEFWQLLQQNYG TELGLNAEEMETLSLSIEDNMQSRSSERSSLDDCGERDERLSKSISFTCESINRVSET ESIDGNLTKVVKEPQSEKQIKKSPSLTSEKRLSRVPSKSLDLNKNEYLSLDKSSTSDS VDEENIPEKDLHGRLYINRVFHISAEKMFELLFTSSRFMQRFANSRNIIDVVSTPWNV EPGGDQLRTMTYTIILNNPLTGKCTAATEKQTLYKESREAQFYLVDSEVLTHDVPYHD YFYTLNRYYIIPSSKQKCRLRVSTDLKYRKQPWAIVKSLIEKNSWSSLEGYFKQLESD LLVEESVLSQSIEDPGKLSGLRRRRRTFNRNAETVPKLSSQHSSGDGGLDVKGDITGK KKEMESYNTALIVVMSIFLLLLVLLNVTLFLKLSKIEYAAQLFYHLHLQEEKSLNLAS DMVSRAENRQKKKDQAHRLKGVLRDSIVMLEELKNSLIMLQRTFDLLNKNKTGVAVES " assembly_gap 6738285..6738374 /estimated_length=90 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6758099..6758160 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6763762..6764095 /estimated_length=334 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6764862..>6771587 /locus_tag="PAL_GLEAN10013392" mRNA join(<6764862..6765004,6766919..6767629,6771320..>6771587) /locus_tag="PAL_GLEAN10013392" /product="Putative palmitoyltransferase ZDHHC23" CDS join(6764862..6765004,6766919..6767629,6771320..6771587) /locus_tag="PAL_GLEAN10013392" /note="GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Putative palmitoyltransferase ZDHHC23" /protein_id="ELK18181.1" /db_xref="InterPro:IPR001594" /db_xref="UniProtKB/Swiss-Prot:Q76IC6" /translation="MKPVKKSKAEEPELEPLCCCEYIDRNGEKNHVAACLCDCQDLDE GCDRWITCKSVQPETCERIMDTISDRLRIPWLRGAKKVNISIVPPLILLPVFLRVASW HFLLGVVVLTSLPVLALWYYYLTHRRKEQTLFFLSLGLFSLGYMYYVFLQEVVPKGHV GPTQLALLTCGLFLILLALYRAKKNPGYLRNPASNDKSLGSSQIECLNSKGQEKSKGF LGADTSGSLNNRTLKDDLKGSSRVSAGSPTKVKEDWCAKCQLVRPARAWHCRICGICV RRMDHHCVCSALCFTCVWYSVIITAGMAYIFLIQLINISYNVTEREVQQALRQKTGRR LLCGLIVDTGQYNRGFLRNWHQFSTLGTHPFHHPAEDIV" gene complement(<6777831..>6851384) /locus_tag="PAL_GLEAN10013393" mRNA complement(join(<6777831..6777975,6779013..6779158, 6779640..6779792,6784915..6785058,6800692..6800793, 6801532..6801614,6803569..6803681,6804470..6804906, 6808568..6808817,6820542..6820732,6830922..6831075, 6833990..6834213,6836003..6836181,6839145..6839282, 6843577..6843718,6849205..6849243,6851295..>6851384)) /locus_tag="PAL_GLEAN10013393" /product="Coiled-coil domain-containing protein KIAA1407 like protein" CDS complement(join(6777831..6777975,6779013..6779158, 6779640..6779792,6784915..6785058,6800692..6800793, 6801532..6801614,6803569..6803681,6804470..6804906, 6808568..6808817,6820542..6820732,6830922..6831075, 6833990..6834213,6836003..6836181,6839145..6839282, 6843577..6843718,6849205..6849243,6851295..6851384)) /locus_tag="PAL_GLEAN10013393" /codon_start=1 /product="Coiled-coil domain-containing protein KIAA1407 like protein" /protein_id="ELK18182.1" /db_xref="UniProtKB/Swiss-Prot:Q95KD7" /translation="MLLAPQERSSSRKRTGLNRWKQFTRKPSPKLAFDPDNVKQWIKR VEEAPEFAVSKAFSAGNTDFSRRLWDQIIDLETSEQIEDHNEVYAEAQELVNDWLDTK LKQELASDGEAENTVSSIPPVSEAKSHLKYDKFDDLCGYLEEEEESTTVQKFIDHLLH KDVVDSGMLEDLGMNGNQDEKQQKDPRLTMEMRHKQVKENRLRREKELERQRIEKTLK KSAFLEARYLVQEEKKRKAMEAKKEEEEIQREMVKLRREIIERRRTVEEAWKIEKKKQ EENSPKNPERGMFQSVHNLLDEEKMAKERKKKLKELLIQTFKENHQCQKRYFSAWHKL ILDHKIKLGKAGTLSDWKFQLKVLHAWRDYTRSQKLKRETQAMENDLREENRKQQLAA EYNRKQVLRHHFTEWQHCYRADILKRELALTKEETRRKMNEFLKAASLGKLRANRSSG VSVLEEATAMVDPPIRNGEVTAVPPGSNDCMPSSHQDRPAKNILQVPLQNVPLNTSDN KLHKTLDVEPSQQPSSNEKLRTSIQKAEPICMGHFHNRHVLQQQLIQKQKKKLQEQKK TILELKESQRLAKARWAAEHATVVTNAKSCPLSNPNEEEPKKTCQVLPNLPVASPLTE GSRSGSRNSLSGPRRNPRQLMAPHPIVKAMEERAVQRAERRRILAERKKKQEEEKLAQ LKAQEEEHQKREAEEKDAQLEKKREEKRLKKMKELEKQKRIKRNQHLEAIAKDHYERV LLRKKGLEPWKRLRMQSKQNVQVAEEHHSLALQRKCLLTWFQWSQESLIRKTAQADQF YSQTLLRRVVQSWLQYLTDLEEEVRKLCVHFLQKKIFRAWFNMVREAKIDFQSKQKVA VEHNDRRILWITFQTWKKFVKFMKEERVREERREQLRKKVAEILPDFQVLAPP" assembly_gap 6830242..6830432 /estimated_length=191 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6844978..6845014 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6851166..6851205 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6851656..>6871921 /locus_tag="PAL_GLEAN10013394" mRNA join(<6851656..6851785,6855621..6855885,6856661..6856716, 6858418..6858551,6860052..6860264,6864276..6864475, 6866591..6866742,6869922..6870039,6871690..>6871921) /locus_tag="PAL_GLEAN10013394" /product="Queuine tRNA-ribosyltransferase subunit QTRTD1" CDS join(6851656..6851785,6855621..6855885,6856661..6856716, 6858418..6858551,6860052..6860264,6864276..6864475, 6866591..6866742,6869922..6870039,6871690..6871921) /locus_tag="PAL_GLEAN10013394" /note="GO_function: GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]; GO_process: GO:0006400 - tRNA modification [Evidence IEA]; GO_process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]" /codon_start=1 /product="Queuine tRNA-ribosyltransferase subunit QTRTD1" /protein_id="ELK18183.1" /db_xref="InterPro:IPR002616" /db_xref="UniProtKB/Swiss-Prot:Q9H974" /translation="MLPDWLCTGGGDSGDLEFCKPHTWRKTVKSLRNLKGKKVGRFAD VMELLLTLMFFSHQDLEESFRMKLSLTKVVNGCRLGKIKNLSKTGDHTMDIPGCLLYT KTGSAPHLTHHTLHCIHGVPAMAQLTLSSLAEHYEVLAEYKEGVGKFIGMPESLLYCS LHDPVSPCPAGYVTNKVCSQKDLHGCNFVPGSQPTSVSVWGVGGRVEMTVSKFMAIQQ ALQPDWFQCLSDGEASCAETNSLKRARKSVDRSLLFLDNCLRLQEESEVLKKSVIIGV IEGGDVMEERLRSARETAKRPVGGFLLDGFHGNPTTLETRLHLLSSVTAELPEDKPRL ICGVSRPDEVLECIERGVDLFESFFPYQVTERGCALTFSFDYQPNPEETLLQQNGTQE EIKYADQAKKIKTTGCNQEKTSFEINLKEKKYQEDFDPLVRGCSCYCCKNHTRAYIHH LLVTNELLAGVLLMIHNFEHYFGFFHSIREALKSDRLAKLKELICRQAS" assembly_gap 6863140..6863217 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6881855..6881887 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6895716..>6925916) /locus_tag="PAL_GLEAN10013395" mRNA complement(join(<6895716..6895912,6897125..6897470, 6900444..6900521,6901691..6901887,6907621..6907763, 6915653..6915765,6925647..>6925916)) /locus_tag="PAL_GLEAN10013395" /product="D(3) dopamine receptor" CDS complement(join(6895716..6895912,6897125..6897470, 6900444..6900521,6901691..6901887,6907621..6907763, 6915653..6915765,6925647..6925916)) /locus_tag="PAL_GLEAN10013395" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0004952 - dopamine receptor activity [Evidence IEA]; GO_process: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]" /codon_start=1 /product="D(3) dopamine receptor" /protein_id="ELK18184.1" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000929" /db_xref="InterPro:IPR001620" /db_xref="InterPro:IPR017452" /db_xref="UniProtKB/Swiss-Prot:P30728" /translation="MAPLSQLSGHINATCGADNTTGARWARPHAYYALSYCALILVII FGNSLVCVAVLRERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRIC CDVFVTLDVMMCTASILNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITVVWVL AFAVSCPLLFGFNTTGDPSVCSISNPDFVIYSSVVSFYVPFGVTVLVYARIYVVLRQR RRKRILTRQNSQCISVRPSFPQQSSCLRLHPIRQFSIRARFPSDATGKMEHSEDKQYP QKCQDPLLSQLQPLSPSRAHVELRRYYSICQDTAFGPPGFQEGEGELKKEGRTRNSLS PTVAPKLSLEVRKLSNGRLSTSLKLGPLQPRGVPLREKKATQMLAIVLGTFIVCWLPF FLTHVLNTHCPACHVSPELYSATTWLGYMNSALNPVIYTTFNVEFRKAFLKILSC" assembly_gap 6933132..6933280 /estimated_length=149 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6943692..6943703 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6976828..6976837 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6986798..6986822 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6993742..6993759 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7009173..>7019525 /locus_tag="PAL_GLEAN10013397" mRNA join(<7009173..7009197,7011679..7012008,7014101..7014201, 7019289..>7019525) /locus_tag="PAL_GLEAN10013397" /product="T cell immunoreceptor with Ig and ITIM domains" CDS join(7009173..7009197,7011679..7012008,7014101..7014201, 7019289..7019525) /locus_tag="PAL_GLEAN10013397" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="T cell immunoreceptor with Ig and ITIM domains" /protein_id="ELK18185.1" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="UniProtKB/Swiss-Prot:Q495A1" /translation="MEHAQNSSGAVTGRIVTVGNISAEEGGSVNLQCHLSFTTAAVTQ VNWEQQDKLLAIHHAKMGWHTSPAFRERVVPGSDLSLTLHSLTANDTGEYFCIYYTFP DGMYKGRLFLKVLLNSEAEHSSRFLTPLLGATALVIICIAVIAAIALARKKKFLRTHS VESDLRRPASAQEEWGPSMLSPHGSCVQVEVVPAGLYREQRGDDYAEQHDYFNVLSYR SLGSLSFPAEMD" assembly_gap 7010707..7010718 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7034366..7034377 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7048407..7048468 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7049237..>7062079) /locus_tag="PAL_GLEAN10013398" mRNA complement(join(<7049237..7049658,7060495..>7062079)) /locus_tag="PAL_GLEAN10013398" /product="Zinc finger and BTB domain-containing protein 20" CDS complement(join(7049237..7049658,7060495..7062079)) /locus_tag="PAL_GLEAN10013398" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger and BTB domain-containing protein 20" /protein_id="ELK18186.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR013069" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q9HC78" /translation="MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRA HRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILT AASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQ SHPQHSVDRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRI HERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILE RNESEECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDGQAEPA QPEQAMEAPSEGGPQPHQLETGASSPERSNEVEMDNTVITVSNSSDKSVLQQSSVNTS IGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKP FLFSLPQPLAGQQTQFVTVSQPGLSTFTAQLPAPQPLAPSAGHSTASGQGEKKPYECT LCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSIC NKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPP GARAGPPGVVACTEGTTYVCSVCPAKFDQIEQFNDHMRMHVSDG" assembly_gap 7056649..7056733 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7093277..7093380 /estimated_length=104 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7114777..7114840 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7139231..7139254 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7164687..7164706 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7165160..7165508 /estimated_length=349 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7178318..7178392 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7224659..7224712 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7301895..7301934 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7308548..7308670 /estimated_length=123 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7417447..7417460 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7464720..7464845 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7503020..7503066 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7601080..7602666 /estimated_length=1587 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7659800..7659866 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7671123..7671154 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7705505..7705595 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7720777..7720868 /estimated_length=92 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7746604..7746620 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <7755283..>7759131 /locus_tag="PAL_GLEAN10013399" mRNA join(<7755283..7755314,7758921..>7759131) /locus_tag="PAL_GLEAN10013399" /product="hypothetical protein" CDS join(7755283..7755314,7758921..7759131) /locus_tag="PAL_GLEAN10013399" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18187.1" /translation="MEASPLRKTPCFDTSNLSNGASAASAAQNSWDLAIKTADCSNGT AGVEQQQSSQVTGSFSSLGSTTASVELWTPGLLLCQ" assembly_gap 7780735..7780812 /estimated_length=78 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7795088..7795106 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7804321..7804364 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7832003..7832116 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7886233..7886266 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7903778..7903788 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7907671..7909768 /estimated_length=2098 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7912541..7912639 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7914427..7914508 /estimated_length=82 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7994374..7994446 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8006124..8006881 /estimated_length=758 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8041194..8041216 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8064117..8064551 /estimated_length=435 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8120077..8120164 /estimated_length=88 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8139382..8139484 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8189530..>8250181 /locus_tag="PAL_GLEAN10013400" mRNA join(<8189530..8189610,8208719..8209337,8250093..>8250181) /locus_tag="PAL_GLEAN10013400" /product="Neuromodulin" CDS join(8189530..8189610,8208719..8209337,8250093..8250181) /locus_tag="PAL_GLEAN10013400" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0040008 - regulation of growth [Evidence IEA]" /codon_start=1 /product="Neuromodulin" /protein_id="ELK18188.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR001422" /db_xref="InterPro:IPR017454" /db_xref="InterPro:IPR018947" /db_xref="UniProtKB/Swiss-Prot:Q6S9D9" /translation="MDRDDCGETWENGGAAEGDCPHLQGLRVEKNDEDQKIEQDGIKP EDKAHKAATKIQASFRGHITRKKLKGEKKGDAQAAEAEVSEKKDEVPVADGVEKKEGE GVTTTEAAPTTGPKPEETGKAGATPAEEKKTESAPDAAAEQAAPQAPAPSEEKASSAE TESATKASTDNSPSSKAEDASAKEEPKQADVPAAVTAAAAAAATTPAAEDAATKATAQ PPTETSESSQAEEKIEAVDETKPKESARQDEGKGEEREADQEHA" assembly_gap 8199834..8201340 /estimated_length=1507 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8213077..8213094 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8226205..8226235 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8251626..8251672 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8252447..8252681 /estimated_length=235 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8255601..8255627 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8269358..8269375 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8273702..8273738 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8276644..8276719 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8296270..8296282 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8314097..8314140 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8339060..>8361072) /locus_tag="PAL_GLEAN10013401" mRNA complement(join(<8339060..8339246,8339732..8339852, 8348949..8349083,8361009..>8361072)) /locus_tag="PAL_GLEAN10013401" /product="Limbic system-associated membrane protein" CDS complement(join(8339060..8339246,8339732..8339852, 8348949..8349083,8361009..8361072)) /locus_tag="PAL_GLEAN10013401" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Limbic system-associated membrane protein" /protein_id="ELK18189.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:Q8BLK3" /translation="MAEWAEPADHKSLIDTDDSIEGREFEGEEEYLEILGITREQSGK YECKAANEVSSADVKQVKITVNYPPTITESKSNEATTGRQASLKCEASAVPAPDFEWY RDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFSKYA KAGLTREN" assembly_gap 8359249..8359307 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8455867..8455963 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8471189..8471262 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8473314..8473643 /estimated_length=330 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8493579..8493625 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8503662..8503811 /estimated_length=150 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8511017..8511105 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8545998..8546010 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8580265..8580294 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8600109..8600524 /estimated_length=416 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8606872..8606888 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8672881..8672914 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8779919..8780017 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8783656..8783799 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8860580..8860599 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8863820..8863861 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<8879962..>8880120) /locus_tag="PAL_GLEAN10013402" mRNA complement(<8879962..>8880120) /locus_tag="PAL_GLEAN10013402" /product="Limbic system-associated membrane protein" CDS complement(8879962..8880120) /locus_tag="PAL_GLEAN10013402" /codon_start=1 /product="Limbic system-associated membrane protein" /protein_id="ELK18190.1" /db_xref="UniProtKB/Swiss-Prot:Q8BLK3" /translation="MVGRVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVR QGDTAILR" assembly_gap 8880508..8880519 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8901799..8901824 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8907366..8907426 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8924474..8924505 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8925625..8928476 /estimated_length=2852 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <8928744..>8929511 /locus_tag="PAL_GLEAN10013403" mRNA <8928744..>8929511 /locus_tag="PAL_GLEAN10013403" /product="Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B" CDS 8928744..8929511 /locus_tag="PAL_GLEAN10013403" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B" /protein_id="ELK18191.1" /db_xref="InterPro:IPR006759" /db_xref="UniProtKB/Swiss-Prot:Q812F8" /translation="MILRFSQLGIIGQMFKSLDLSLIVESIIVFYRDKPIDWLLDRIL WVKVCNPEKNAKLWDPHKAYLRVRFNLSLFQFVSTQSLLAGGQDPETEGQGLGEAGIA GRVLQHTGGGEHEPRDLAALPPSSRRPCLGILPALQSTLRRTLSASASFGCQVRSGSC SAAGVTLTTWLQALQHLCGSAACPLITSSRTREIGMRAAQPHSGALGALMATATLAPS TECGRGRGGGWPSVPGSTAPLHPDRLTDVGHSDWHLP" assembly_gap 8945856..8945889 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8948669..8948975 /estimated_length=307 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8957870..8957907 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8960674..8960962 /estimated_length=289 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8964709..8964758 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8989262..8989291 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 8991837..8991855 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9045239..9045277 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9051538..9051554 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9052004..9052104 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9070389..9070410 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9081846..9081887 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9138214..9138446 /estimated_length=233 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9142823..9142835 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9143545..9143615 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9163683..9163694 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9165596..9165647 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9174085..9174245 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9177762..9177874 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9208257..9208373 /estimated_length=117 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9219032..9219079 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9224600..9224624 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9262066..9262097 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9307704..9307765 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9324371..9324387 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9338990..9339036 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9341914..9342636 /estimated_length=723 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9345376..9345387 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9396739..9396908 /estimated_length=170 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9423421..9423448 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9510400..9510449 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9561589..9561615 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9566541..9566551 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9576989..9577035 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9578176..9578188 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9636173..9636207 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9657368..9657569 /estimated_length=202 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9660589..9660616 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9701634..9701798 /estimated_length=165 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9711995..9712089 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9727083..9727128 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9754159..9754176 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9762325..9763035 /estimated_length=711 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9780119..9780168 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9787210..9787280 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9844098..9844237 /estimated_length=140 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9858771..9858797 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9889734..9891262 /estimated_length=1529 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9914738..9914778 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9951950..9952370 /estimated_length=421 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9961867..9961914 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9966329..9966362 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9969150..9969302 /estimated_length=153 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9973915..9974324 /estimated_length=410 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 9987361..9987372 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10014853..10014873 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10015578..10015648 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10016834..10016858 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10028146..10028197 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10179872..10180188 /estimated_length=317 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10184333..10185173 /estimated_length=841 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10212769..10212787 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10233600..10234654 /estimated_length=1055 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10261640..10261650 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10293028..10293065 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10324488..10324612 /estimated_length=125 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10347069..10347088 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10393453..10393565 /estimated_length=113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10398709..10398727 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10416364..10416995 /estimated_length=632 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10428867..10432644 /estimated_length=3778 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10444057..10444081 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10450114..10450202 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10453845..10453916 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10466956..10466965 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10528137..10528162 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10566291..10566313 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10582386..10582409 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10588761..10588891 /estimated_length=131 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10596527..10600041 /estimated_length=3515 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10603644..10603916 /estimated_length=273 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10657812..10657825 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10660773..10660821 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10733164..10733189 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10763175..10763225 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10812845..10812912 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10839389..10839425 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10852219..10852254 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10853030..10853043 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10865893..10865910 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10877981..10878030 /estimated_length=50 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<10884827..>10906686) /locus_tag="PAL_GLEAN10013405" mRNA complement(join(<10884827..10885271,10886794..10886944, 10887444..10887566,10899763..10899918,10902807..10903014, 10904378..10904541,10906557..>10906686)) /locus_tag="PAL_GLEAN10013405" /product="Immunoglobulin superfamily member 11" CDS complement(join(10884827..10885271,10886794..10886944, 10887444..10887566,10899763..10899918,10902807..10903014, 10904378..10904541,10906557..10906686)) /locus_tag="PAL_GLEAN10013405" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Immunoglobulin superfamily member 11" /protein_id="ELK18192.1" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR013106" /db_xref="UniProtKB/Swiss-Prot:Q5DX21" /translation="MILALVPGWRWGRGGKGNLEGGEGWVFFSEEITVDFGFPGVGSG VAASLEVSESPGSIQVARGQTAVLPCTFTTSAALINLNVIWMVIPLSNANQPEQVILY QGGQIFDGAPRFHGRVGFTGTMPATNVSIFINNTQLSDTGTYQCLVNNLPDRGGRNIG VTGLTVLVPPSAPHCQIQGSQDIGSDVILLCSSEEGIPRPTYLWEKLDNTLKLPPTAT QDQVQGTVTIRNISALSSGLYQCMASNAIGTSTCLLDLQVISPQPRNFGLIAGAIGTG AVIIIFCIALILGAFFYWRSKNKEEEEEEIPNEIREDDLPPKCSSSAKAFHTEISSSE NNTLTSSNTYNSRYWSNIPKVHRNTESFNHFGDLHQSFSVHSGNVNIPSIYANGNHLV PASHKTLVVTANRGSSPQVMSRSNGSVSTKPRPQHTHSYTISQAMLERIGAVPVMVPA QSRAGSLV" assembly_gap 10920113..10922677 /estimated_length=2565 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10925536..10925557 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10931614..10931757 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10946296..10946586 /estimated_length=291 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10976619..10976675 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10984985..10985005 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 10992955..10993835 /estimated_length=881 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11010306..11010346 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(ALWS01006626.1:1..23334,gap(44),ALWS01006627.1:1..1284, gap(18),ALWS01006628.1:1..43458,gap(9264),ALWS01006629.1:1..30559, gap(85),ALWS01006630.1:1..35409,gap(22),ALWS01006631.1:1..22061, gap(110),ALWS01006632.1:1..2432,gap(25),ALWS01006633.1:1..46957, gap(23),ALWS01006634.1:1..4465,gap(72),ALWS01006635.1:1..5250, gap(11),ALWS01006636.1:1..42731,gap(32),ALWS01006637.1:1..35618, gap(37),ALWS01006638.1:1..18278,gap(15),ALWS01006639.1:1..7980, gap(13),ALWS01006640.1:1..6738,gap(45),ALWS01006641.1:1..46089, gap(25),ALWS01006642.1:1..1867,gap(92),ALWS01006643.1:1..7934, gap(13),ALWS01006644.1:1..2321,gap(15),ALWS01006645.1:1..30455, gap(878),ALWS01006646.1:1..74616,gap(61),ALWS01006647.1:1..32255, gap(38),ALWS01006648.1:1..11159,gap(72),ALWS01006649.1:1..985, gap(64),ALWS01006650.1:1..4260,gap(337),ALWS01006651.1:1..8548, gap(812),ALWS01006652.1:1..38274,gap(17),ALWS01006653.1:1..112799, gap(32),ALWS01006654.1:1..2703,gap(171),ALWS01006655.1:1..26213, gap(45),ALWS01006656.1:1..9771,gap(42),ALWS01006657.1:1..6582, gap(105),ALWS01006658.1:1..3492,gap(21),ALWS01006659.1:1..48299, gap(34),ALWS01006660.1:1..2758,gap(1465),ALWS01006661.1:1..1711, gap(10),ALWS01006662.1:1..8550,gap(13),ALWS01006663.1:1..16488, gap(32),ALWS01006664.1:1..25284,gap(36),ALWS01006665.1:1..78495, gap(40),ALWS01006666.1:1..21264,gap(36),ALWS01006667.1:1..34328, gap(45),ALWS01006668.1:1..32206,gap(511),ALWS01006669.1:1..40298, gap(1215),ALWS01006670.1:1..2333,gap(18),ALWS01006671.1:1..46877, gap(54),ALWS01006672.1:1..8343,gap(126),ALWS01006673.1:1..28891, gap(92),ALWS01006674.1:1..51525,gap(26),ALWS01006675.1:1..20570, gap(2326),ALWS01006676.1:1..36033,gap(415),ALWS01006677.1:1..20608, gap(677),ALWS01006678.1:1..124569,gap(118),ALWS01006679.1:1..14005, gap(85),ALWS01006680.1:1..1500,gap(25),ALWS01006681.1:1..5176, gap(22),ALWS01006682.1:1..33567,gap(33),ALWS01006683.1:1..13550, gap(33),ALWS01006684.1:1..10541,gap(21),ALWS01006685.1:1..8859, gap(58),ALWS01006686.1:1..4872,gap(57),ALWS01006687.1:1..18843, gap(84),ALWS01006688.1:1..57963,gap(19),ALWS01006689.1:1..68091, gap(11),ALWS01006690.1:1..40272,gap(51),ALWS01006691.1:1..13229, gap(79),ALWS01006692.1:1..3250,gap(365),ALWS01006693.1:1..9478, gap(19),ALWS01006694.1:1..59783,gap(66),ALWS01006695.1:1..10592, gap(33),ALWS01006696.1:1..26184,gap(23),ALWS01006697.1:1..49005, gap(121),ALWS01006698.1:1..11822,gap(114),ALWS01006699.1:1..31839, gap(15),ALWS01006700.1:1..23868,gap(24),ALWS01006701.1:1..14618, gap(151),ALWS01006702.1:1..14406,gap(215),ALWS01006703.1:1..17365, gap(32),ALWS01006704.1:1..41985,gap(71),ALWS01006705.1:1..20036, gap(17),ALWS01006706.1:1..21262,gap(19),ALWS01006707.1:1..5952, gap(70),ALWS01006708.1:1..4419,gap(1559),ALWS01006709.1:1..18811, gap(11),ALWS01006710.1:1..15671,gap(34),ALWS01006711.1:1..11267, gap(143),ALWS01006712.1:1..10136,gap(792),ALWS01006713.1:1..11530, gap(4623),ALWS01006714.1:1..25928,gap(50),ALWS01006715.1:1..21233, gap(24),ALWS01006716.1:1..20518,gap(18),ALWS01006717.1:1..7523, gap(51),ALWS01006718.1:1..15607,gap(166),ALWS01006719.1:1..37727, gap(48),ALWS01006720.1:1..6683,gap(100),ALWS01006721.1:1..95194, gap(58),ALWS01006722.1:1..3870,gap(51),ALWS01006723.1:1..8463, gap(45),ALWS01006724.1:1..20262,gap(67),ALWS01006725.1:1..19173, gap(12),ALWS01006726.1:1..34102,gap(47),ALWS01006727.1:1..5926, gap(1660),ALWS01006728.1:1..45662,gap(67),ALWS01006729.1:1..21300, gap(26),ALWS01006730.1:1..24294,gap(21),ALWS01006731.1:1..8067, gap(66),ALWS01006732.1:1..15567,gap(18),ALWS01006733.1:1..86116, gap(51),ALWS01006734.1:1..34756,gap(53),ALWS01006735.1:1..74061, gap(2050),ALWS01006736.1:1..36418,gap(35),ALWS01006737.1:1..22959, gap(16),ALWS01006738.1:1..14296,gap(18549),ALWS01006739.1:1..7913, gap(344),ALWS01006740.1:1..65097,gap(52),ALWS01006741.1:1..31240, gap(33),ALWS01006742.1:1..2937,gap(46),ALWS01006743.1:1..34160, gap(94),ALWS01006744.1:1..9226,gap(873),ALWS01006745.1:1..12274, gap(64),ALWS01006746.1:1..37998,gap(19),ALWS01006747.1:1..9056, gap(57),ALWS01006748.1:1..2304,gap(11),ALWS01006749.1:1..33829, gap(20),ALWS01006750.1:1..21173,gap(143),ALWS01006751.1:1..22617, gap(451),ALWS01006752.1:1..6836,gap(17),ALWS01006753.1:1..21844, gap(47),ALWS01006754.1:1..1520,gap(16),ALWS01006755.1:1..7756, gap(1080),ALWS01006756.1:1..2637,gap(1231),ALWS01006757.1:1..4690, gap(829),ALWS01006758.1:1..19993,gap(207),ALWS01006759.1:1..39570, gap(67),ALWS01006760.1:1..12040,gap(37),ALWS01006761.1:1..29757, gap(37),ALWS01006762.1:1..15534,gap(16),ALWS01006763.1:1..8712, gap(315),ALWS01006764.1:1..25697,gap(104),ALWS01006765.1:1..14442, gap(23),ALWS01006766.1:1..9602,gap(43),ALWS01006767.1:1..26820, gap(692),ALWS01006768.1:1..7935,gap(141),ALWS01006769.1:1..41261, gap(52),ALWS01006770.1:1..32385,gap(21),ALWS01006771.1:1..5896, gap(21),ALWS01006772.1:1..24554,gap(26),ALWS01006773.1:1..14106, gap(59),ALWS01006774.1:1..25133,gap(151),ALWS01006775.1:1..22055, gap(28),ALWS01006776.1:1..590,gap(51),ALWS01006777.1:1..1192, gap(24),ALWS01006778.1:1..13931,gap(707),ALWS01006779.1:1..2372, gap(1657),ALWS01006780.1:1..11499,gap(404),ALWS01006781.1:1..61347, gap(50),ALWS01006782.1:1..3465,gap(30),ALWS01006783.1:1..7452, gap(12),ALWS01006784.1:1..38246,gap(35),ALWS01006785.1:1..22352, gap(428),ALWS01006786.1:1..35713,gap(22),ALWS01006787.1:1..60221, gap(14),ALWS01006788.1:1..10832,gap(416),ALWS01006789.1:1..23027, gap(113),ALWS01006790.1:1..18715,gap(58),ALWS01006791.1:1..6954, gap(22),ALWS01006792.1:1..4732,gap(69),ALWS01006793.1:1..43052, gap(10),ALWS01006794.1:1..41693,gap(10),ALWS01006795.1:1..21336, gap(1428),ALWS01006796.1:1..4729,gap(122),ALWS01006797.1:1..1479, gap(313),ALWS01006798.1:1..13768,gap(64),ALWS01006799.1:1..51164, gap(13),ALWS01006800.1:1..11101,gap(16),ALWS01006801.1:1..24394, gap(161),ALWS01006802.1:1..8960,gap(76),ALWS01006803.1:1..10796, gap(27),ALWS01006804.1:1..2122,gap(43),ALWS01006805.1:1..18807, gap(160),ALWS01006806.1:1..1522,gap(3172),ALWS01006807.1:1..46375, gap(374),ALWS01006808.1:1..74668,gap(47),ALWS01006809.1:1..26481, gap(16),ALWS01006810.1:1..8831,gap(55),ALWS01006811.1:1..14368, gap(711),ALWS01006812.1:1..13151,gap(67),ALWS01006813.1:1..15652, gap(15),ALWS01006814.1:1..2531,gap(30),ALWS01006815.1:1..12632, gap(36),ALWS01006816.1:1..8400,gap(87),ALWS01006817.1:1..6746, gap(81),ALWS01006818.1:1..16272,gap(31),ALWS01006819.1:1..29370, gap(20),ALWS01006820.1:1..16786,gap(31),ALWS01006821.1:1..26452, gap(12),ALWS01006822.1:1..46924,gap(716),ALWS01006823.1:1..24334, gap(57),ALWS01006824.1:1..52485,gap(10),ALWS01006825.1:1..2466, gap(437),ALWS01006826.1:1..2389,gap(24),ALWS01006827.1:1..26644, gap(26),ALWS01006828.1:1..79570,gap(87),ALWS01006829.1:1..5210, gap(64),ALWS01006830.1:1..7923,gap(2467),ALWS01006831.1:1..11500, gap(59),ALWS01006832.1:1..45830,gap(10),ALWS01006833.1:1..29734, gap(10),ALWS01006834.1:1..27491,gap(35),ALWS01006835.1:1..4949, gap(44),ALWS01006836.1:1..6793,gap(95),ALWS01006837.1:1..52708, gap(87),ALWS01006838.1:1..4290,gap(2763),ALWS01006839.1:1..4965, gap(17),ALWS01006840.1:1..4355,gap(3318),ALWS01006841.1:1..18161, gap(900),ALWS01006842.1:1..11960,gap(23),ALWS01006843.1:1..4531, gap(4074),ALWS01006844.1:1..10675,gap(28),ALWS01006845.1:1..17708, gap(47),ALWS01006846.1:1..9584,gap(61),ALWS01006847.1:1..16855, gap(38),ALWS01006848.1:1..31088,gap(13),ALWS01006849.1:1..14033, gap(794),ALWS01006850.1:1..1587,gap(19),ALWS01006851.1:1..52949, gap(313),ALWS01006852.1:1..18471,gap(160),ALWS01006853.1:1..5742, gap(54),ALWS01006854.1:1..5947,gap(700),ALWS01006855.1:1..63008, gap(13),ALWS01006856.1:1..42145,gap(28),ALWS01006857.1:1..13340, gap(2808),ALWS01006858.1:1..18799,gap(101),ALWS01006859.1:1..18469, gap(30),ALWS01006860.1:1..11556,gap(129),ALWS01006861.1:1..4317, gap(35),ALWS01006862.1:1..56515,gap(24),ALWS01006863.1:1..27781, gap(308),ALWS01006864.1:1..12624,gap(589),ALWS01006865.1:1..41623, gap(157),ALWS01006866.1:1..7156,gap(42),ALWS01006867.1:1..38625, gap(35),ALWS01006868.1:1..44069,gap(39),ALWS01006869.1:1..15315, gap(61),ALWS01006870.1:1..45533,gap(39),ALWS01006871.1:1..122990, gap(11),ALWS01006872.1:1..9288,gap(16),ALWS01006873.1:1..38575, gap(2066),ALWS01006874.1:1..8695,gap(79),ALWS01006875.1:1..56867, gap(35),ALWS01006876.1:1..34980,gap(107),ALWS01006877.1:1..7568, gap(484),ALWS01006878.1:1..33185,gap(50),ALWS01006879.1:1..1752, gap(1031),ALWS01006880.1:1..106973,gap(32),ALWS01006881.1:1..5899, gap(782),ALWS01006882.1:1..32685,gap(34),ALWS01006883.1:1..12590, gap(48),ALWS01006884.1:1..6091,gap(10),ALWS01006885.1:1..10123, gap(661),ALWS01006886.1:1..5606,gap(31),ALWS01006887.1:1..848, gap(34),ALWS01006888.1:1..9734,gap(139),ALWS01006889.1:1..20047, 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