LOCUS KB030332 7139671 bp DNA linear CON 19-MAR-2015 DEFINITION Pteropus alecto unplaced genomic scaffold scaffold60, whole genome shotgun sequence. ACCESSION KB030332 ALWS01000000 VERSION KB030332.1 DBLINK BioProject: PRJNA171993 BioSample: SAMN01103203 KEYWORDS WGS. SOURCE Pteropus alecto (black flying fox) ORGANISM Pteropus alecto Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus. REFERENCE 1 (bases 1 to 7139671) AUTHORS Zhang,G., Cowled,C., Shi,Z., Huang,Z., Bishop-Lilly,K.A., Fang,X., Wynne,J.W., Xiong,Z., Baker,M.L., Zhao,W., Tachedjian,M., Zhu,Y., Zhou,P., Jiang,X., Ng,J., Yang,L., Wu,L., Xiao,J., Feng,Y., Chen,Y., Sun,X., Zhang,Y., Marsh,G.A., Crameri,G., Broder,C.C., Frey,K.G., Wang,L.F. and Wang,J. TITLE Comparative analysis of bat genomes provides insight into the evolution of flight and immunity JOURNAL Science 339 (6118), 456-460 (2013) PUBMED 23258410 REFERENCE 2 (bases 1 to 7139671) AUTHORS Zhang,G., Cowled,C. and Wang,L. TITLE Direct Submission JOURNAL Submitted (06-AUG-2012) Department of Science and Technology, Beijing Genomics Institute, Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 1.06 Genome Coverage :: 110x Sequencing Technology :: Illumina HighSeq 2000 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..7139671 /organism="Pteropus alecto" /mol_type="genomic DNA" /submitter_seqid="scaffold60" /db_xref="taxon:9402" /chromosome="Unknown" /sex="male" /tissue_type="kidney" /geo_loc_name="Australia: Anglican Church Grammer School, East Brisbane" /collection_date="Nov-2008" gene complement(<380..>43485) /locus_tag="PAL_GLEAN10009444" mRNA complement(join(<380..557,3793..3968,14082..14220, 16178..16376,20756..20920,34804..35067,43401..>43485)) /locus_tag="PAL_GLEAN10009444" /product="Solute carrier organic anion transporter family member 3A1" CDS complement(join(380..557,3793..3968,14082..14220, 16178..16376,20756..20920,34804..35067,43401..43485)) /locus_tag="PAL_GLEAN10009444" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Solute carrier organic anion transporter family member 3A1" /protein_id="ELK18237.1" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR011497" /db_xref="InterPro:IPR016196" /db_xref="UniProtKB/Swiss-Prot:Q8R3L5" /translation="MLVFGPACGFILGSFCTKIYVDAVFIDTSNLDITPDDPRWIGAW WGGFLLCGALLFFSSLLMFGFPQSLPPHSDPAMESEQAMLPEREYERPKPSNGVLRHP LEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIAVVAGFAAFLGKYLEQQF NLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALGAIRMAMLVNLVSTACYVSF LFLGCDTGPVAGVTVPYGNISASGSALDPYSPCNKNCECQTDSFTPVCGADGITYLSA CFAGCNSTNLTGCACLTTVPPKNATVVPGKCPSPGCQEAFLTFLCVMCVCSMIGAMAQ TPSVIILIRTVNPELKSYALGVLFLLLRLLGEYHYVFDSILPYSILFYPILFYLFYFY LLLGRQATS" assembly_gap 4984..5254 /estimated_length=271 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 11310..11608 /estimated_length=299 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 51227..51311 /estimated_length=85 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 73625..74190 /estimated_length=566 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 104900..106507 /estimated_length=1608 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 162834..162896 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 166010..166031 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<167835..>281548) /locus_tag="PAL_GLEAN10009445" mRNA complement(join(<167835..168401,213970..214156, 281466..>281548)) /locus_tag="PAL_GLEAN10009445" /product="Solute carrier organic anion transporter family member 3A1" CDS complement(join(167835..168401,213970..214156, 281466..281548)) /locus_tag="PAL_GLEAN10009445" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Solute carrier organic anion transporter family member 3A1" /protein_id="ELK18238.1" /db_xref="InterPro:IPR004156" /db_xref="InterPro:IPR016196" /db_xref="UniProtKB/Swiss-Prot:Q8HYW2" /translation="MFGNRRVMQDCFELDPSRSSRPKEERMPRAVVFTGSQLSPVIYS LSINSILASVLWPLTPTVPRFTNPGRMSQSDLRDLCEDGLRGVKARVSVLTTLERRFN LQSADVGVIASSFEIGNLALILFVSYFGARGHRPRLIGCGGIVMALGALLSALPEFLT HQYKYEAGEIRWAAEGRDVCAANGSAGDQGPDPDLICRSRTATNMMYLLLIGAQVLLG IGATPVQPLGVSYIDDHVRRKDSSLYIGRGGPPRAAGLFRACARRVRHLGVWAEEGQV GP" assembly_gap 224298..225271 /estimated_length=974 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 251187..251282 /estimated_length=96 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 279420..279498 /estimated_length=79 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 364448..364511 /estimated_length=64 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 387416..387614 /estimated_length=199 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 391275..391336 /estimated_length=62 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 402920..402939 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 419746..419767 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 424268..424285 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 426198..426212 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <433962..>434324 /locus_tag="PAL_GLEAN10009446" mRNA <433962..>434324 /locus_tag="PAL_GLEAN10009446" /product="hypothetical protein" CDS 433962..434324 /locus_tag="PAL_GLEAN10009446" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18239.1" /translation="MDHVLCNKLQTDRGSRERPGSPGSQRRRFTSPPPRWGGQGLYPG PHPACKVAAVCFRTHRLSYFGLDKGNKQDQQGVTTRTQPPRLERLLLVGQCPGRLRHP LGSYRPCKATRHTEATSI" assembly_gap 441649..441921 /estimated_length=273 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 450401..450447 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 452667..452712 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<454314..>494006) /locus_tag="PAL_GLEAN10009447" mRNA complement(join(<454314..454593,456812..456971, 459629..459829,461988..462121,470413..470577, 473058..473146,473957..474067,475897..475986, 476941..477074,481851..482002,482339..482519, 493466..>494006)) /locus_tag="PAL_GLEAN10009447" /product="Synaptic vesicle glycoprotein 2B" CDS complement(join(454314..454593,456812..456971, 459629..459829,461988..462121,470413..470577, 473058..473146,473957..474067,475897..475986, 476941..477074,481851..482002,482339..482519, 493466..494006)) /locus_tag="PAL_GLEAN10009447" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Synaptic vesicle glycoprotein 2B" /protein_id="ELK18240.1" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR011701" /db_xref="InterPro:IPR016196" /db_xref="InterPro:IPR020846" /db_xref="UniProtKB/Swiss-Prot:Q7L1I2" /translation="MNDGYRNSPNLYRGARDIAREATRQSRNQGMDDYKYQDNYEGYA PSDGYYRGNESNPEEDAQSDVTEGHDEEDEIYEGEYQGIPHPDDVKAKQAKKAPSRAD GLRGQADLLAERMEDEEQLAHQYETIIDECGHGRFQWILFFVLGLALMADGVEVFVVS FALPSAEKDMCLSSSKKGMLGLIVYLGMMAGAFILGGLADKLGRKKVLSMSLAVNASF ASLSSFVQGYGAFLFCRLISGIGIGGALPIVFAYFSEFLSREKRGEHLSWLGIFWMTG GIYASAMAWSIIPHYGWGFSMGTHYHFHSWRVFVIVCVLPCAVSMVALRFMPESPRFL LEMGKHDEAWMILKQVHDTNMRAKGTPEKVFTVSNIKTPKQMDEFIEIQSSTGTWYQR WLVRFKTTFKQVWDNALYCVLGPYRMNTLILAVVWFSMALSYYGLTVWFPDMIRYYQD EEYKSKMKVFFGEHVYGATINFTMENQIHQHGKLVNDKFTKMYFKHVLFEDTFFDECY FEDVTSTDTYFKNCTIESTIFYNTDLYEHKFINCRFINSTFLEQKEGCHMDFEQDNDF LIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCFFLFFGNSESAMIG WQCLFCGTSIAAWNALDVITVELYPTNQRATAFGILNGLCKFGAILGNTIFASFVGIT KVVPILLAATSLVGGGLIALRLPETRRKGNARRTSSGNFQCPHTSCLSPSRGPWIALE EMLIL" assembly_gap 465124..465200 /estimated_length=77 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 479336..479372 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 531443..531469 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <557260..>756407 /locus_tag="PAL_GLEAN10009448" mRNA join(<557260..557359,676865..676908,702794..702941, 711570..711866,718034..718217,718450..718587, 733888..734086,736551..738482,738585..739689, 743312..743448,756228..>756407) /locus_tag="PAL_GLEAN10009448" /product="A-kinase anchor protein 13" CDS join(557260..557359,676865..676908,702794..702941, 711570..711866,718034..718217,718450..718587, 733888..734086,736551..738482,738585..739689, 743312..743448,756228..756407) /locus_tag="PAL_GLEAN10009448" /codon_start=1 /product="A-kinase anchor protein 13" /protein_id="ELK18241.1" /db_xref="UniProtKB/Swiss-Prot:Q12802" /translation="MEPSPERLFPPLTQHNPPSQDLQFHLLSLQPAHLSWVMKLNPQQ APLYGDCVVTVLLAEEDKVEDDVVFYLVFSGSTLHHCTSTRKVSSDTLETIAPSHDCC ETVQVLLCASKEGLPVSVVADADFSFVQDEACDAAQFLATSAGNQQALNFTRFLSRSG TPSADVDSLDEKVALAFRHLKLPADWNVLGTDQTLHDGGPRETLMHFAVRLGLLRLTW FLLQKPGGRGALRIHNQEGATPVSLALERGYHKLHQLLTDASFLSDVVENLEKGLSVG AAFQYRVSSLPRFSTKEDRFPVPCSFSWENAGEPDSWSSLSYEIPYGDCSVRHHRELD VYTLTSESQSPQEPLFPGDSCTGHIFKLMNIQQQLMKTNLKQMDSLMPLMMTAQDSSG STAQDTDGQFLSRASVSTDSRQLSPPADAESSPCCPESTAGQIESSCDLSSVGKEEHK DRSYRKKSKDVGKNGEEVGPAPAVDSGTASEPSSCLQSMPDCEAKGTEGSPSCGIRNE ETGTESAMATDQAALSSGDVVRPGVVVAAPDTGQHFSAGELVVSAAADASVPQTAGET GHGLVNPDATSQKNKGMEKKGEQAEEHGESAKGRLENSDLSAAGASGVRDTSTPVDKA GVPNCVSATSSVCGDKPAQSPVGFLSTEASIGKTADTGTSESRKESSAISVDQNSLVL PAAAEDKISDASEPDAPLANTCEAVSPSDLNFPRPQKDVMPKQKSETNSSHVQSKSPI CSASGDDKLRAASTCQQSTVTSSGALAGKQHGDTVSQPGSTTTELPNTQHPPAAVCPE GSATFDHVRDTRGDVGFCSLEVSDKEGQGRDLKLETSLTNVLEVLPHPHAVVPKAKKE PVSDQALSSGRTFSLASSPGNESVTKDDVLSLVPSQKEKGTATSEPYNAADCEDGRDS CEPDKQPLEDSAAGLPTPPAALALPPSMGNASPVGFGGEQERPCPSAAPEVLSIEGDA DCSLLRVGQAALASATSLTEKGKNPVVPESSAAQGQDDKDKAEAPGVCAEPSSNACAE DKALEGGSSWGTPLACLNAETKHNKEVAPPVSLLTEGGAARSLVPPGASLAADSSQEA LCAEQSSSTPLQGLLPQGSEACNCDGSFALDVGVKETESLGASTAGEVRGNVAADAAL ASALQGTVEAGREAVSRDAHGLSTPEVLLNQGKNVILGLPEALPNKCATDLQGAASPE MVPLRWGKARLDGGDRSCSLGDSKDAQVGDDARLVPLQPTAETGVLTSEDKATGRERS APPLPCAVSADARHLPETAGSIEEAASRIVDAVIERVKASGALLPEGETSHMSPSCPE SGPVTEQLESASAGKAMAFLPGETQRMGSVHEEAPGNPAGCFAGREESEKILRPVQGS EPTTEMPDTKADDEVDFLSNIRESSVSEEVAAGDTVTTPKMTRQGPKTQAEPLLILRP QVQQVSCSRRLLKRAPGTGDQCVLLVPVLTEGVEGQVSLSTEVFESAASWM" assembly_gap 560042..560412 /estimated_length=371 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 580362..580406 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 610514..610545 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 619247..619457 /estimated_length=211 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 687892..687917 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 738513..738536 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 744927..745627 /estimated_length=701 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 752411..752884 /estimated_length=474 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <767782..>848548 /locus_tag="PAL_GLEAN10009450" mRNA join(<767782..767862,775888..775963,781119..781255, 787856..788226,790405..790458,793387..793452, 795271..795463,797686..797794,803379..803507, 807044..807086,809365..809497,816066..816240, 822949..823016,825212..825281,828787..828922, 830167..830279,830865..831011,831582..831832, 833124..833249,833365..833482,834139..834387, 837435..837511,838070..838251,838373..838455, 840318..840446,840629..840823,841317..841466, 841907..841977,842428..842472,844746..844796, 845518..845967,847361..847700,848499..>848548) /locus_tag="PAL_GLEAN10009450" /product="A-kinase anchor protein 13" CDS join(767782..767862,775888..775963,781119..781255, 787856..788226,790405..790458,793387..793452, 795271..795463,797686..797794,803379..803507, 807044..807086,809365..809497,816066..816240, 822949..823016,825212..825281,828787..828922, 830167..830279,830865..831011,831582..831832, 833124..833249,833365..833482,834139..834387, 837435..837511,838070..838251,838373..838455, 840318..840446,840629..840823,841317..841466, 841907..841977,842428..842472,844746..844796, 845518..845967,847361..847700,848499..848548) /locus_tag="PAL_GLEAN10009450" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0023034 - intracellular signaling pathway [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]" /codon_start=1 /product="A-kinase anchor protein 13" /protein_id="ELK18242.1" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR002219" /db_xref="UniProtKB/Swiss-Prot:Q12802" /translation="MYERHKRRYSLCDISKVDRAVDVVLLKINRESWCTVEPGPDAAS LLAPTQSPECENFLDVGLGRGCIVKQDALKRESGSDSDLFHSPSEEVDSIIFSKPEEE QSVCDTTGSSSSTDDTASLDRHSSHGSDVSLPQISNLNRSRDQQCLDGFYSPGMGAEG RETEREPAGPGEAEEEEMDSITDVPTSCSVLRGSMRSLSPFRRHSWGPGKNAASDGEM NQRSSMRVLGDVVRRPPIHRRSMSWCPSGVQYSAALSADFNCRSFSLEGLTGGADVGN KPSSSLDGNSVNNKELRHPFSGEERGDSLVSLSEEDLEADQREHRMFAQQTCHRSKQQ GFNYCTSAISSPLTKSISLMTISHPGLDTRQQPQPARRTSFSVSVSPLLLKSKALFSL GSSHPSDEEEETPCSRPFHSTSANLTESITEENYNFLPQSPSKKDFEGKSGTKVSRTF SYIKNKMSSSKKSKEKEKEKEKIKEKEKESKEKEKDKKVLNGHSFSSIPMVGPISCSQ CMKPFTSKEAYTCANCSAFVHKGCRESLASCAKVKMKQPKGSLQAHDTSSLPTVIMRN KSASQPKERPRSAVLLADETVTAPIFANRRSQQSVSLSKSVSIQNIAGVGNDENISNT WKFLSHSTDSLNKIVKVNESTESLTDEGTDMNEGQLLGDFELESKQLEAESWSRIVDG KFLKQQKKDVVKRQEVIYELMQTELHHIRTLKIMSDVYSRGMMTDLLFEQQMVEKLFP CLDELISIHSQFLQRILERKKESMVDKSEKNFLIKRMGDVLVNQFSGENAERLKKTYG KFCGQHTQSVNCFKDLYTKDKRFQAFVKKKMSSSVVRRLGVPECILLVTQRITKYPVL FQRILQCTKDNEVEQEDLAQSLSLVKEVIGAVDSKVASYEKKVRLNEIYTRTDSKSIM RMKSGQMFAKEDLKRKKLVRDGSVFLKNTAGRLKEVQAVLLTDILVFLQEKDQKYIFA SLDQKSTVISLKKLIVREVAHEEKGLFLISMGMRDPEMVEVHASSKEERNSWIRIIQD TINTLNRDEDEGIPSENEEEKKMLDTKARELKVTRVPLGRADAERQAKASKEGVEKKA GGRGVEARSGLLCQKFREQLQQKDQQILLLLEEKEMIFRDMTECSTPLPEDCSPTHSS RILFRSNTEEALKGGPLMKSAINEVEVLQSLVSGSLGGPLGPPAESEGVAGPVSLPRR AETFGGFDSHQMNASKGGDKEEGDDGQDLRRTESDSGLKKGGNANLAFMLKRNNEQVA QSIVHLHELLSALQGVVSQQDSYIEDQKLMLSERALTRSSSRPSSLIEQEKQRSLEKQ RQDLANLQKQQAQLLEEKRKREREWESRERALQEREARLAQREEEVLRGQQDLERDQE ELQQRKGAYQLDLERLRAAQKQLGREQEQLEREAERLSQRRRDPGACQVSHQHTKLLR IPSFLPNLEESPLPCAPPVAKSGSLDSELSVSPKRNSISRTYKDKGPFHILSSTSQTS KVPEGPSQTPATTLTSSSTRLFGLAKPKDKKEKKKKNKAGRAQPDDGPAAAVPAEGEE IFC" assembly_gap 809141..809154 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 812533..812616 /estimated_length=84 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <856214..>856453 /locus_tag="PAL_GLEAN10009453" mRNA <856214..>856453 /locus_tag="PAL_GLEAN10009453" /product="hypothetical protein" CDS 856214..856453 /locus_tag="PAL_GLEAN10009453" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18243.1" /translation="MTDATCWRNYTRLRTLVSFSHKRVTAGGLPEQERHVTSHGTTSV IELGTRVFQERMTQEKREAGVRIPRENQSKGRRCC" assembly_gap 861349..861449 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 873191..873319 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 873567..874526 /estimated_length=960 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 882051..882094 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 893674..894774 /estimated_length=1101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 896960..897435 /estimated_length=476 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 909763..910916 /estimated_length=1154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 912719..912789 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 916676..916719 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 942308..942363 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 944819..944840 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 967837..967872 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 969463..969657 /estimated_length=195 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 983091..983106 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 988852..989948 /estimated_length=1097 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1022518..1022564 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1048761..1048954 /estimated_length=194 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1054182..>1072646 /locus_tag="PAL_GLEAN10009454" mRNA join(<1054182..1054668,1060416..1060562,1063650..1063781, 1067296..1067389,1072283..>1072646) /locus_tag="PAL_GLEAN10009454" /product="Cytosolic carboxypeptidase 4" CDS join(1054182..1054668,1060416..1060562,1063650..1063781, 1067296..1067389,1072283..1072646) /locus_tag="PAL_GLEAN10009454" /codon_start=1 /product="Cytosolic carboxypeptidase 4" /protein_id="ELK18244.1" /db_xref="UniProtKB/Swiss-Prot:Q09M05" /translation="MDSREVPYKVGFAGLSVEWIILFLGRPGRCIASLQEEPVTSQSL RTVPAGNVRCPACADSWRLWEWVPGGHVSRCHGKGEEGELCCSHGSSGSKVLQAQVPC RVSGTVLCSARCPYWGWSRARGQAERCVGSHLHTILRMQEEEEGNRETEHFRVREQHI PDSTDRRIRYMISKGGSEALLQTLVGAARSASPDYDVLLPLFRLLAKVGLRDKKFGKK ALELEALDVTLILARKNLSHSQNLLHCLWALRVFATSVTTGAMLGINGAMELLFKVIT PYTQKRTRIIRGWSLKAVACPDHRTTLQERGFGAAHRPRWQLRPSPFPRAGSALGRTT LVSLTGGRVSSILTVPCVPAGVQQGSHAMIYAVSAQGLPGAWVTKGLWGPEDPLDLTA RQQEDTDVLGPHPAP" assembly_gap 1057044..1057429 /estimated_length=386 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1058870..1058887 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1066161..1066331 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1069913..1070108 /estimated_length=196 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1082795..1082804 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1085610..1085675 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1092713..1092803 /estimated_length=91 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1104195..1104230 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1117572..>1152818 /locus_tag="PAL_GLEAN10009456" mRNA join(<1117572..1117611,1121658..1121866,1126156..1126270, 1127196..1127266,1131738..1131854,1132858..1133438, 1134960..1135043,1135279..1135359,1138002..1138150, 1146695..1146875,1147692..1147836,1152777..>1152818) /locus_tag="PAL_GLEAN10009456" /product="Cytosolic carboxypeptidase 4" CDS join(1117572..1117611,1121658..1121866,1126156..1126270, 1127196..1127266,1131738..1131854,1132858..1133438, 1134960..1135043,1135279..1135359,1138002..1138150, 1146695..1146875,1147692..1147836,1152777..1152818) /locus_tag="PAL_GLEAN10009456" /codon_start=1 /product="Cytosolic carboxypeptidase 4" /protein_id="ELK18245.1" /db_xref="UniProtKB/Swiss-Prot:Q96MI9" /translation="MYAVYLVISFGRHGSNSRRAVNRGYVTSLLRLHQDWHSHDTANT YVLIRRALLLCLRHIATLRSGREAFLAAQGMEILFSLTQSLRRCYPKRPLPLVTASSA NAFPVPGDVASEPPRALAEEDFEDDSDDEEEDKDSDSEEVKEEDDDLETDVNKLSCKP GLDRPEGELMQYAAMCPELSCSFEELERNPGGDLNPDEMQHANHRHIPADASPERHCL TRDQSSRGREREDAVQTSLLSTVKWGRSTGHLASRKGHGMNPSQSAQSNGPGMDSSGN ETLDTQAFLKEDAWDMDTISCPKTNASFPNSTRCRGPVEVMDKLLQAHPKHVPFHDPY LYMAKARGTRSVADLKTVAFPDLWGHCPSSSPQPLLERKCGIQRIKIIEDIRRFIQPG DVMNKVVFSLDEPWPDTASGVLRFSSKFESGNLRKAIQVRECEYDLLLNADVSSAQHQ QWFYFKVGGMRPAVPYRFNVINCEKPNSQFNYEDPNAQWTSKPTLEMFEGATTSFGAH AYFALRCGLDDNMSRESLHSCISISGNGKSIFGSVNHYRQSAAVTGAASGKCYYTLTF TVTFPHNEDVCYLAYHYPYTYTTLTRIVLDDIYEQTFL" assembly_gap 1124334..1126143 /estimated_length=1810 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1137708..1137738 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <1157568..>1412915 /locus_tag="PAL_GLEAN10009457" mRNA join(<1157568..1157684,1157967..1158120,1233494..1233728, 1316544..1316631,1331378..1331509,1338516..1338692, 1358968..1359164,1375251..1375369,1396251..1396339, 1400760..1400923,1412810..>1412915) /locus_tag="PAL_GLEAN10009457" /product="Cytosolic carboxypeptidase 4" CDS join(1157568..1157684,1157967..1158120,1233494..1233728, 1316544..1316631,1331378..1331509,1338516..1338692, 1358968..1359164,1375251..1375369,1396251..1396339, 1400760..1400923,1412810..1412915) /locus_tag="PAL_GLEAN10009457" /note="GO_function: GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Cytosolic carboxypeptidase 4" /protein_id="ELK18246.1" /db_xref="InterPro:IPR000834" /db_xref="UniProtKB/Swiss-Prot:Q96MI9" /translation="MSTPLPILPGSEVPCAAEGLCPVLLSAWVRSVFMVTTVMTHLDS LEKNIDPKKVYFRQEALCQTLGGNSCPLVTVTAMPESDSAHHLEQFRQRPYQVITARV HPGESNASWVMKGTLEFLVSDDPVARLLRENFIFKIIPMLNPDGVINGKYVWHLAQPT PPPHIVSPCGSPSVHLQPTIYHAKGLLHYLSATGHRPVVFCDFHGHSQKKNVFLYGCS IKETLWQAESAVGTSTLLEDVSYRTLPKILDQLAPAFTMSSCSFVVEKSRASTARVVV WREMGVSRSYTMESSFCGCNQGPYQISGFVCKHDGRRMLTESRVGDSGRHPRKQRAKG QTSNDAADLRSSVENQLGHLSTLPRPEKSFVHTRDGWICGIPFATTKAKKTVGTVLLM SLKLRGQRQQHLPSENKQALIIDIKQKNLTRVIAYEDGICRNNQGLQFSTRELEEMGA MFCLGLLILELKSVSCSQQLRTRAAALLNAEEDALDHHLQRTLTPYLIIKIAFYLKVS KVVPDNNFVIQKHKHHK" assembly_gap 1163916..1163938 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1201051..1201442 /estimated_length=392 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1203474..1206103 /estimated_length=2630 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1220480..1223215 /estimated_length=2736 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1239154..1239172 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1245302..1245483 /estimated_length=182 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1258958..1258977 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1279323..1280217 /estimated_length=895 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1281693..1281725 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1291505..1291593 /estimated_length=89 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1296483..1296528 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1304146..1304182 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1370887..1370931 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1407700..1408604 /estimated_length=905 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1441770..1441793 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1469612..1469627 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1482069..1482222 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1492915..1492951 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1500644..1500691 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1501105..1501149 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1503231..1503902 /estimated_length=672 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1511576..1511633 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1531524..1531693 /estimated_length=170 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1535253..1535304 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1556307..1556693 /estimated_length=387 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1557651..1558659 /estimated_length=1009 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1613705..1614267 /estimated_length=563 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1626154..1626191 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1648277..1648307 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1649094..1649219 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1651633..1651869 /estimated_length=237 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1658166..1658213 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1665843..1665884 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1667052..1667079 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1679599..1679964 /estimated_length=366 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1698662..1700635 /estimated_length=1974 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1702590..1702599 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1704960..1704990 /estimated_length=31 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1729252..1730215 /estimated_length=964 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1748617..1748637 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1764755..1764875 /estimated_length=121 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1775404..1775419 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1813639..1813671 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1865420..1865436 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1877694..1878441 /estimated_length=748 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1882861..1885158 /estimated_length=2298 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1921878..1921932 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1923632..1925183 /estimated_length=1552 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1941319..1942002 /estimated_length=684 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1943325..1943433 /estimated_length=109 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1963566..1963592 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1968378..1968457 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 1980683..1980809 /estimated_length=127 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<1999312..>2002469) /locus_tag="PAL_GLEAN10009463" mRNA complement(join(<1999312..1999497,2002326..>2002469)) /locus_tag="PAL_GLEAN10009463" /product="NT-3 growth factor receptor" CDS complement(join(1999312..1999497,2002326..2002469)) /locus_tag="PAL_GLEAN10009463" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="NT-3 growth factor receptor" /protein_id="ELK18247.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q6VNS1" /translation="MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL SNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLSIKEIYRILHALGKATP IYLDILG" assembly_gap 2000607..2000777 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2014745..2015080 /estimated_length=336 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2027601..2027799 /estimated_length=199 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2038782..>2040336) /locus_tag="PAL_GLEAN10009465" mRNA complement(join(<2038782..2038847,2040112..>2040336)) /locus_tag="PAL_GLEAN10009465" /product="NT-3 growth factor receptor" CDS complement(join(2038782..2038847,2040112..2040336)) /locus_tag="PAL_GLEAN10009465" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="NT-3 growth factor receptor" /protein_id="ELK18248.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q03351" /translation="MILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDL ATRNCLVGANLLVKIGDFGMSRDVYSTDYYRNMKRSRLSSIPGRGERSTMQP" gene complement(<2041051..>2134364) /locus_tag="PAL_GLEAN10009466" mRNA complement(join(<2041051..2041456,2044382..2044554, 2052045..2052175,2134130..>2134364)) /locus_tag="PAL_GLEAN10009466" /product="NT-3 growth factor receptor" CDS complement(join(2041051..2041456,2044382..2044554, 2052045..2052175,2134130..2134364)) /locus_tag="PAL_GLEAN10009466" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="NT-3 growth factor receptor" /protein_id="ELK18249.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:Q6VNS1" /translation="MADATSSGPCVSWRVGPVAVISGEEDSASPLHHINHGITTPSSL DAGPDTVVIGMTRIPVIENPQYFRQGHNCHKPDTYVQHIKRRDIVLKRELGEGAFGKV FLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMV YLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVRRLFPLQGSVAELA PCLHVFIIVHQPCHSGTHTYTAMAMHTLDNCPLALPAS" assembly_gap 2044174..2044211 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2078642..2078674 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2080466..2080996 /estimated_length=531 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2088170..2088535 /estimated_length=366 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2090075..2090106 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2133909..2133936 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2141380..2141454 /estimated_length=75 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2149013..2149044 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2167145..2167199 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2194141..>2316809) /locus_tag="PAL_GLEAN10009467" mRNA complement(join(<2194141..2194351,2200362..2200623, 2204412..2204514,2205293..2205357,2213683..2213979, 2214416..2214557,2215015..2215157,2215925..2216082, 2223980..2224048,2257270..2257341,2258086..2258160, 2316562..>2316809)) /locus_tag="PAL_GLEAN10009467" /product="NT-3 growth factor receptor" CDS complement(join(2194141..2194351,2200362..2200623, 2204412..2204514,2205293..2205357,2213683..2213979, 2214416..2214557,2215015..2215157,2215925..2216082, 2223980..2224048,2257270..2257341,2258086..2258160, 2316562..2316809)) /locus_tag="PAL_GLEAN10009467" /note="GO_component: GO:0005887 - integral to plasma membrane [Evidence IEA]; GO_function: GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA]; GO_function: GO:0005030 - neurotrophin receptor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]; GO_process: GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA]" /codon_start=1 /product="NT-3 growth factor receptor" /protein_id="ELK18250.1" /db_xref="InterPro:IPR000372" /db_xref="InterPro:IPR000483" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="InterPro:IPR020446" /db_xref="InterPro:IPR020777" /db_xref="UniProtKB/Swiss-Prot:Q5IS82" /translation="MDVSLCPAKCSFWRIFLLGSVWLDYVGSVLACPANCVCSKTEIS CRRPDDGNLFPLLEGQDSGNSTGNASINITDISRNITSIHIENWRGLHTLNAVDMELY TGLQKLTIKNSGLRSIQPRAFAKNPHLRYINLSSNRLTTLSWQLFQTLSLRELRLEQN FFNCSCDIRWMQLWQEQGEARLNSQNLYCVSAEGSQLPLFRMNISQCDLPEISVSHVN LTVREGDNAVITCNGSGSPLPDVDWIVSGLQSINTHQTNLNWTNVHAINLTLVNVTSE DNGFTLTCIAENVVGMSNASVSLTVHYPPRVVSLEEPELRLEHCIEFVVRGNPPPTLH WLHNGQPLRESRIIRVEYYQEGEVSEGCLLFNKPTHYNNGNYTLVAKNPLGTANQTIN GHFLKEPFPVYEVSPTPPITVTHKPEEDTFGVSIAVGLAAFACVLLVVLFIMINKYGR RSKFGMKGASGSAKSGSCNRRQQSREINMTVDRETRFRMSGEKPHAENSGTQGGCCKS LVPAPPHIAALRAVRGGESVLQEEAWRPSARCGPVTRQIIQTREAAVSVSGLVKRASD DCMEMLVLFLPLVRDGWVTRDSNWLSLILLGPKWLGHLIPEAPPMLYL" assembly_gap 2241176..2241238 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2254080..2254288 /estimated_length=209 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2259858..2259881 /estimated_length=24 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2261068..2261130 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2262389..2262402 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2265936..2265973 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2284621..2284663 /estimated_length=43 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2296484..2297351 /estimated_length=868 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2316904..2317199 /estimated_length=296 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2317564..2317658 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2325282..2325340 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2343115..2343144 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2351547..2351576 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2357610..2357651 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2369901..2370019 /estimated_length=119 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2391427..2391484 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2429965..2430031 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2451745..2451789 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2459644..>2468300) /locus_tag="PAL_GLEAN10009468" mRNA complement(join(<2459644..2459894,2465041..2465214, 2466641..2466830,2468073..>2468300)) /locus_tag="PAL_GLEAN10009468" /product="39S ribosomal protein L46, mitochondrial" CDS complement(join(2459644..2459894,2465041..2465214, 2466641..2466830,2468073..2468300)) /locus_tag="PAL_GLEAN10009468" /codon_start=1 /product="39S ribosomal protein L46, mitochondrial" /protein_id="ELK18251.1" /db_xref="InterPro:IPR021757" /db_xref="UniProtKB/Swiss-Prot:Q9H2W6" /translation="MAAPGMRTLIGVARAWRRFEGLRASSLGSRSLTLAAKPSNSMSP WSLLGAVCLQRPPLVSKPLTPLQKEMAALLQQIEIERSLYSDHELRALDEAQRLAKRK ADLYDEEEDEQNILLVQDLEDMWEQKFLQFKPGARITEADEKNDRTSLHRKLDRNLVL LVKEKLGDEDVWMLPQAEWQPGETLQGTAKRTLAALSENNMEAKFLGNAPCGHYKFKF PQAIRTESSIGAKVFFFKALLLTGDFAQAGKKGHHVWVSKEELGDYLKPKYLAQVKRF LLDL" gene <2468323..>2478518 /locus_tag="PAL_GLEAN10009469" mRNA join(<2468323..2468384,2468881..2469009,2476207..2476336, 2477602..2477667,2478411..>2478518) /locus_tag="PAL_GLEAN10009469" /product="28S ribosomal protein S11, mitochondrial" CDS join(2468323..2468384,2468881..2469009,2476207..2476336, 2477602..2477667,2478411..2478518) /locus_tag="PAL_GLEAN10009469" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="28S ribosomal protein S11, mitochondrial" /protein_id="ELK18252.1" /db_xref="InterPro:IPR001971" /db_xref="UniProtKB/Swiss-Prot:P82911" /translation="MRRSALLGQSYVPTRQRGNGIVVAWAPASTIHTSAQLLQDGAAK QETEGKTAAPTSAPSRSSFSTQIQVVSAMNQPLARASCGTEGFRNAKKGTGIAAQTAG IAAAAKATGKGVTHIRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRK ARRL" assembly_gap 2487198..2487608 /estimated_length=411 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2498081..2498100 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2502807..>2518810) /locus_tag="PAL_GLEAN10009470" mRNA complement(join(<2502807..2502996,2505957..2506148, 2511329..2511516,2514297..2515389,2518797..>2518810)) /locus_tag="PAL_GLEAN10009470" /product="DET1 like protein" CDS complement(join(2502807..2502996,2505957..2506148, 2511329..2511516,2514297..2515389,2518797..2518810)) /locus_tag="PAL_GLEAN10009470" /codon_start=1 /product="DET1 like protein" /protein_id="ELK18253.1" /db_xref="InterPro:IPR019138" /db_xref="UniProtKB/Swiss-Prot:Q7L5Y6" /translation="MRQVRDVIMDHHVSTIKPRRIQNQNVIHRLEHRRISSGKAGTHW HQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFSSDQTSLEIYEYQGCQAAE DLLQGYEGEILSNGNDQRSVNIRGRLFERFFVLLHITNVAANGEHLNRECSLFTDDCR CVIVGSAAYLPDEPHPPFYEVYRNSESVTPNPRSPLEDYSLHIIDLHTGRLCDTRTFK CDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTV SAVFPEVQRDSQTGMANPFRDPFINSLKHRLLVYLWRRAEQDGSAMAKRRFFQYFDQL RQLRMWKMQLLDENHLFIKYTSEDVVTLRVTDPSQASFFVVYNMVTTEVIAVFENTSD ELLELFENFCDLFRNATLHSEVQFPCSASSNNFARQIQRRFKDTIVNAKYGGHTEAVR RLLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGLLKFE IQAGLLGRPINHTVRRLVAFTFHPFEPFAISVQRTNAEYVVNFHMRHCCT" assembly_gap 2517034..2517075 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2518032..2518045 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2534543..2534583 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2541303..2542018 /estimated_length=716 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2558990..>2569610 /locus_tag="PAL_GLEAN10009472" mRNA join(<2558990..2559220,2568209..2568409,2569524..>2569610) /locus_tag="PAL_GLEAN10009472" /product="Interferon-stimulated protein 20 kDa protein" CDS join(2558990..2559220,2568209..2568409,2569524..2569610) /locus_tag="PAL_GLEAN10009472" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0004527 - exonuclease activity [Evidence IEA]" /codon_start=1 /product="Interferon-stimulated protein 20 kDa protein" /protein_id="ELK18254.1" /db_xref="InterPro:IPR006055" /db_xref="InterPro:IPR012337" /db_xref="InterPro:IPR013520" /db_xref="UniProtKB/Swiss-Prot:Q96AZ6" /translation="MASNMEVVAMDCEMVGLGPFSIESGLARCSLVDYHGAVLYDKFI RPEGEITNYRTRVSGITPWHMEEATPFAVARLEILQLLKGKLVVGHDLKHDFKALKED MSGYAIYDTATDRLLWHEAGLDNCKRVSLRVLSERLLGRHIQNSQFGHSSVEDARATM ELYRIARRIRSR" assembly_gap 2562449..2562484 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2588520..2588631 /estimated_length=112 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2663946..2667128 /estimated_length=3183 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2670639..2670675 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2675297..2676345 /estimated_length=1049 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2683695..>2717374 /locus_tag="PAL_GLEAN10009473" mRNA join(<2683695..2683764,2686027..2686410,2687304..2687478, 2688038..2688165,2689667..2689960,2691263..2691667, 2692439..2692613,2693128..2693255,2695681..2695974, 2697774..2697965,2698524..2699048,2702469..2703047, 2703160..2705802,2706643..2706756,2711184..2711297, 2714354..2714512,2714916..2715049,2715970..2716114, 2716696..2716878,2717298..>2717374) /locus_tag="PAL_GLEAN10009473" /product="Aggrecan core protein" CDS join(2683695..2683764,2686027..2686410,2687304..2687478, 2688038..2688165,2689667..2689960,2691263..2691667, 2692439..2692613,2693128..2693255,2695681..2695974, 2697774..2697965,2698524..2699048,2702469..2703047, 2703160..2705802,2706643..2706756,2711184..2711297, 2714354..2714512,2714916..2715049,2715970..2716114, 2716696..2716878,2717298..2717374) /locus_tag="PAL_GLEAN10009473" /note="GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005509 - calcium ion binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005540 - hyaluronic acid binding [Evidence IEA]; GO_process: GO:0007155 - cell adhesion [Evidence IEA]" /codon_start=1 /product="Aggrecan core protein" /protein_id="ELK18255.1" /db_xref="InterPro:IPR000436" /db_xref="InterPro:IPR000538" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="InterPro:IPR016060" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:Q28343" /translation="MTTLLLVFVTLRVITAAVSVEVSDPDNSLSVSIPEPSPLRVLLG TSVTIPCYFIDPMHPVTTAPSTAPLAPRIKWSRISKEKEVVLLVATEGQVRVNSAYQD KVSLPNYPAIPSDATLEIQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRAI STRYTLDFDRAQRACLQNSAIIATPEQLLAAYEDGFHQCDAGWLADQTVRYPIHIPRE GCYGDKDEFPGVRTYGIRDTNETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRL GARLATTGQLYLAWQSGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYLHANQ TGYPDPSSRYDAICYTGEDFVDIPENFFGVGGEEDITVQTVTWPDVELPLSRNVTEGE AQGNVILTMKPIFPGSPTALEPEEPFTSAPDVEATAIPEAESGTEEATGPWAFPEEST PGLGPATAFTSEDHVVQVTAAPGAAEVPGRPRLPGGVVFHYRPGSARYSLTYEEARQA CLRTGAVIASPEQLQAAYEAGYEQCDAGWLQDQTVRYPIVSPRTPCVGDKDSSPGVRT YGVRPPSETYDVYCYVDKLEGEVFFATRQEQFTFQEALEFCESQNATLASTGQLYAAW SLGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVRTVYLYPNQTGLLDPLSRHHAFC FRGEEEGSTPTSPSDLEDWIVTQVGPGVAAVPLGEETTAIRDFTIEPENQTAWESAYT PAGTYPLPGVPPTWPPTNAATEESTEGSSATEGPLASEEPSPSKELFPSEEPFTPSPP LPSRTELPGSGETSGAPEVSGDFTGSGEALGPLDLSGQPSEDLDSSGLTSTVGSGLPL GSGLASGDEYKITWSNTSEVGGLPSGSEGLEGSVSGVEDLSGLPSGEGPGATASGVED VSGLPSGGEGVPPTWPPTNAATEESTEGSSATEGPLASEEPSPSKELFPSEEPFTPSP PLPSRTELPGSGETSGAPEVSGDFTGSGEALGPLDLSGQPSEDLDSSGLTSTVGSGLP LGSGLASGDEYKITWSNTSEVGGLPSGSEGLEGSVSGVEDVSGLPSGEGPGATASGVE DVSGLPSGEGPGATASGVEDVSGLPSGEEDVSGLPSGGEGHVETSTSGVEDVSGLPSG GEGHVETSTSGVEDVSGLPSGGEGHVETSTSGVEDVSGLPSGGEGHVETSTSGVEDVS GLPSGGEGHMETSTSGVEDIGGLPSGGESHLETSASGVEDIGGLPSGGEGHLETSASG VEDVSGLPSGGEGHLETSASGVEDVSGLPSGKEDLIGSASGALDFGRIPSETLGSGQA PEASGLPSGLSGEYSGMDLGSGPSSGLPDLSGLPSGFPTISLVDTTLVEVVTATPAGE LEGRGTIGISGAGEVSGLPFSELDVSGGASGLPSGAELSGQASGSPDISGETSGLFGV SGQPSGFPDISGGTSGLFEVSGKPSGFPGETSGVTELSGLPSGQPEVSGEASGVLFGS GQPFGITDLSGGTSGVPDLSGQPSGLPEFSGTTSGIPDLVSSAMSGSGEPSGITFVDT SLVEVTPTTFKEEEGLGSVELSGLPSGETDPSSTSGIVDVSGQSSGAIDSSGFTSQPP EFSGLPSGVAEVSGEASGAEIGSSLPSGAYDGSGLSSGFPTISLVDRTLVESVTQPPT AQEAGEGPSGVLELSGAHSGAPDVSGDPSGFLDLSGLQSGLVEPSGAPSSTPYFSGDF SGTSDVSGESSAATSTSGEASGLPEVTLITSEFIEGVTEPTVSQELGQRPPLTHTPQL FESSSEASASGDISGATSRFPGSGIEASSIPESSSETSAYPEAGVGVSAAPEASGGAS WSPDLSETTSAFHEADLERASGLGVSDTTSAFQEGPREGSTPPEMSGASTTTYDVGAE TSGWPSATPVASGERTEISGDLSGHASGLDVVISTSVPEFEWTQQTERPAEAHLEIES SSPLHSGEETRTAETATTPTDASIPAFLEETKDSEATTAAPARSCAEEPCGAGTCQEI EGHVICLCPPGYPGEHCDIDLDECLSSPCLNGATCVDAIDSFTCLCLPSYRGDLCEID QELCEEGWTKFQGHCYRHFPDRENWVDAESRCREQQSHLSSIVTPEEQEFVNNTLRVS NAMPYNRVLSPDNAQDYQWIGLNDRTIEGDFRWSDGHSLQFENWRPNQPDNFFATGED CVVMIWHEKGEWNDVPCNYQLPFTCKKGTVACGDPPVVEHARTFGQKKNRYEINSLVR YQCTEGFVQRHVPTIRCQPSGHWEEPRITCTDPTTYKRRLQKRSSRPPRRSRPSTAH" assembly_gap 2693496..2693597 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2694325..2694675 /estimated_length=351 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2699068..2701815 /estimated_length=2748 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2708759..2708812 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2719279..>2741438) /locus_tag="PAL_GLEAN10009474" mRNA complement(join(<2719279..2719565,2720238..2720499, 2721666..2721982,2723634..2723815,2726827..2726896, 2726996..2727053,2730377..2730493,2730596..2730751, 2731742..2731926,2734342..2734486,2735365..2735514, 2735971..2736152,2738157..2738288,2741366..>2741438)) /locus_tag="PAL_GLEAN10009474" /product="Lactadherin" CDS complement(join(2719279..2719565,2720238..2720499, 2721666..2721982,2723634..2723815,2726827..2726896, 2726996..2727053,2730377..2730493,2730596..2730751, 2731742..2731926,2734342..2734486,2735365..2735514, 2735971..2736152,2738157..2738288,2741366..2741438)) /locus_tag="PAL_GLEAN10009474" /note="GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005540 - hyaluronic acid binding [Evidence IEA]; GO_process: GO:0007155 - cell adhesion [Evidence IEA]" /codon_start=1 /product="Lactadherin" /protein_id="ELK18256.1" /db_xref="InterPro:IPR000421" /db_xref="InterPro:IPR000538" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR003596" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR006209" /db_xref="InterPro:IPR006210" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR013106" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/Swiss-Prot:P79385" /translation="MLGPRLLAALCGVLLCASGLFAASGPCFPNPCHNDAECLVLDEL KRGDNFIQYVCKCPHGYAGYHCETVCSMPLGMETGAIADSQISASSLQLGFMGLQRWG PELARLRRTGLVNAWTASNYDRTPWIQVNLLRKMGVTGVVTQGASRTGISEYVKTFKV AYSVNGKNFQFIQGDSGDKVFIGNLDNNGLKTNLFDFPLEVQYVRLVPTICHRSCTLR FELLGCELNGCAGPLGLKDNTIPDKQITASSTYKTWGLNSFSWYPFYARLDKQGKFNA WTAEKNSASEWLQIDLGSEKQVTGIITQGARDFGHIQYVAAYRLAYSNNGVDWTEYSD PGTSEGKIFPGNLDNNSHKKNMFETPFQARYVRILPVAWHNRITLRTQIARDPERARA VELPLGDGIREAGRRELGCEPRRGALRSRVSVPGLQPCSGPPSTATMHDAMCLLLLGL LLPLPCVSGLPFYNGFYYANRPHGQNLGNGHGEDLFDGVKLVVETPEETLFSHRGANV TLPCRYHYEPALVSPRPVRIKWWKLSENGAPEWDVLVAIGPRHRAFGDYQGRVRLRQD GACEASLQIWDLRLEDYGRYRCELNFHEAQQACQEQDAVVASFEQLFRAWEEGLDWCN AGWLQDASVQYPITLARRPCGGLGLAPGVRSYGPRHRHLHRYDVFCFAAALKGQVYYL EHPEKLTLAEAKEACQEDGAQIAKVGQLFAAWKFRGLDRCDAGWLADGSARYPVVHPH PNCGPLEPGVRSFGFPDPESRKYGVYCYRPC" assembly_gap 2720508..2720554 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2763912..2764440 /estimated_length=529 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2768491..2768610 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2776415..2776712 /estimated_length=298 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2794156..>2834328 /locus_tag="PAL_GLEAN10009476" mRNA join(<2794156..2794349,2797732..2797836,2814676..2814851, 2817901..2818068,2822524..2822707,2826791..2826883, 2829154..2829264,2831263..2831332,2832206..2832290, 2834132..>2834328) /locus_tag="PAL_GLEAN10009476" /product="Abhydrolase domain-containing protein 2" CDS join(2794156..2794349,2797732..2797836,2814676..2814851, 2817901..2818068,2822524..2822707,2826791..2826883, 2829154..2829264,2831263..2831332,2832206..2832290, 2834132..2834328) /locus_tag="PAL_GLEAN10009476" /codon_start=1 /product="Abhydrolase domain-containing protein 2" /protein_id="ELK18257.1" /db_xref="InterPro:IPR000073" /db_xref="UniProtKB/Swiss-Prot:Q5EA42" /translation="MNAMLETSELPAVFDGVKLAAVAAVLYVIVRCLNLKSPTAPPDL YFQDSGLSRFLLKSCPLLTKDRVLYPKSRATLLTSRNRMASDIMPFCVLLSVDRHRYI PPLIWGKSGHIQTALYGKMGRVRSPHPYGHRKFITMSDGATSTFDLFEPLAEHCIGGD ITMAICPGIANHSEKQYIRTFVDYAQKNGYRCAVLNHLGALPNIELTSPRMFTYGCTW EFGAMVNYIKKTYPLTQLVVVGFSLGGNIVCKYLGETQANQEKVLCCVSVCQGYSALR VQETFMQWDQCRRFYNFLMADNMKKIILSHRQALFGDHVRKPQSLEDSDLSRLYTATS LMQIDDNVMRKFHGYNSLKEYYEEESCMRYLHRIYVPLMLVNAADDPLVHESLLTIPK SLSEKRENVMFVLPLHGGHLGFFEGSVLFPEPLTWMDKLVVEYANAICQWERNKSQCS DTELVEADLE" assembly_gap 2841658..2841672 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2844040..>2850135) /locus_tag="PAL_GLEAN10009478" mRNA complement(join(<2844040..2844198,2844535..2844645, 2845575..2845733,2847011..2847189,2848631..2848877, 2850022..>2850135)) /locus_tag="PAL_GLEAN10009478" /product="Retinaldehyde-binding protein 1" CDS complement(join(2844040..2844198,2844535..2844645, 2845575..2845733,2847011..2847189,2848631..2848877, 2850022..2850135)) /locus_tag="PAL_GLEAN10009478" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005215 - transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Retinaldehyde-binding protein 1" /protein_id="ELK18258.1" /db_xref="InterPro:IPR001071" /db_xref="InterPro:IPR001251" /db_xref="InterPro:IPR008273" /db_xref="InterPro:IPR011074" /db_xref="UniProtKB/Swiss-Prot:P10123" /translation="MVPEEEQELRAQLERLTTKDHGPVFGQCAELPPHTLQKHLPATL CVHLTLFQAKDELNEREETREEVIRELRKLVQAQAASGQELARAVAEKVQGRDSAFFL RFIRARKFHVGRAYELLRGYVHFRLQYPELFDSLSLEAVRCTIEAGYPGVLSSRDKYG RVVMLFNIENWDSEEVTFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAA GLRAADLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLQRVFVHGD DLSSFFQEIDKDILPTDFGGTLPKYDGKVLAEQLFGPRTQAENTAF" assembly_gap 2846375..2846411 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <2859656..>2912490 /locus_tag="PAL_GLEAN10009479" mRNA join(<2859656..2859708,2861099..2861201,2862246..2862318, 2866704..2866834,2867531..2867687,2867769..2867826, 2869201..2869242,2869586..2869709,2870164..2870249, 2871846..2871972,2875501..2875593,2876244..2876380, 2879226..2879403,2880823..2880910,2883201..2883295, 2883767..2883837,2885070..2885184,2886656..2886778, 2890560..2890628,2894989..2895090,2895491..2895661, 2895737..2895858,2896369..2896533,2898112..2898291, 2899785..2899951,2900289..2900365,2901268..2901384, 2903273..2903324,2904144..2904271,2904368..2904436, 2904629..2904722,2905036..2905223,2906347..2906400, 2906480..2906539,2909678..2909752,2911042..2911137, 2911434..2911547,2912428..>2912490) /locus_tag="PAL_GLEAN10009479" /product="Fanconi anemia group I protein" CDS join(2859656..2859708,2861099..2861201,2862246..2862318, 2866704..2866834,2867531..2867687,2867769..2867826, 2869201..2869242,2869586..2869709,2870164..2870249, 2871846..2871972,2875501..2875593,2876244..2876380, 2879226..2879403,2880823..2880910,2883201..2883295, 2883767..2883837,2885070..2885184,2886656..2886778, 2890560..2890628,2894989..2895090,2895491..2895661, 2895737..2895858,2896369..2896533,2898112..2898291, 2899785..2899951,2900289..2900365,2901268..2901384, 2903273..2903324,2904144..2904271,2904368..2904436, 2904629..2904722,2905036..2905223,2906347..2906400, 2906480..2906539,2909678..2909752,2911042..2911137, 2911434..2911547,2912428..2912490) /locus_tag="PAL_GLEAN10009479" /codon_start=1 /product="Fanconi anemia group I protein" /protein_id="ELK18259.1" /db_xref="UniProtKB/Swiss-Prot:Q9NVI1" /translation="MLTLRSRIRVLRPRLPGLFLICATMDQKILSLAAGKSVDRLQEF LQTLKEDDLVNLLQSEAVKGEAVGAFLRAIFKGSPCSEEAGALRRLKIYTCCIQLVES GDLQNEVASEIIGLLMLEAHNFPGPLLVELANEFVDAIKEGRLMNGKSLELLPIILTA LVTKKENLAYGKDELSGEESKKQLINTLCSGRWDRQYVIQLTSMFKDVPLTAEEVGFV MEKVLKMFSKLNLQEVPPLVYQLLVLSSKGNRKKILEGIIAFFNELDKQHNKEESGNE LLEVVTVPSGELRHVEGTVILHIVFAVKLDCELGKELLKHLKAGQQGDFSNNICPFSI ALLLSLTRIQRFEEQVFDLLRTSVIKNFKDLQLLQGSKFLQNLVPHRSCVSAMILEVV QNSVHSWDHVTQGLVELGFILMDSYGPKKILDEPIETSLGLSKTPKQHACTLGANILL ETFKIHEMIRQEILEQVLNRVVTRASSPISHYLVLQSCSSKVTETFDYLSFLPLPTVQ GLLKAVQPLLKVSMSMRDSLILVLRKAMFASRLDARKSAVAGFLLLLKNFKVLGSLSS SQCSQSIGVSQVFVDVHSRYNSVANETFCLEIMDSLRRCLGQQADVRLMLYEGFYDVL RRNSQLANSIMHTLLSQLKQFYEPQPDVLPPLKLEACILTQGDQISLQEPLDHLLCCI QHCLAWYKSRVLPLQQEEEEEEEGFYQDLDDMLESITSRMIKSELEDFELDKSADFSQ STGIGIKNNICASLVMGICEVLIEYNFSISNFSKNKSEEVLSLFTCFKKLSDILNEKA GKGKTKMTSKTHDSFLSMNFVSELLTALFRDSTQSHEESLSVLRSSSEFMHYAVSVAL QKVQQLQKTGHVSGPHGQNPEKIFQNLCDITRVLLWRYISIPTSVEESGKKEKGKSIS LLCLEGLQKIFSAVHQFYQPKIPLFLRALDGLDDEGEDVEVSVTQRAAFQIRQFQRSL LNLLSSQEEDFNSKEAVLLVSVIASLSKLLEPSSPQFAQMLSWTSKICKENSREDASF CKGLMNLLFSLHVLYKSPVTLLRDLSQDIHGHLGDIDQDIEMEKTNHFAMVNLRTAAP TVCLLVLSQAETVLEEVDWLIIKLKGQLSQETVSEEASSQATLPNRPIEKAIIMQLGT LLTFFHELVQTALPSGSCVDTLLKDLCKMYTILTALVRYYLQVYRNSRGIPKIMEKLV KLSGSHLTPLCYSFISYVQNKKTRSLKHTGGKKKEKAAAVAMAMARVLRETKPIPNLI FAIEQYEKFLIQLSKRSKVNLMQHMKLSTSRDFKIKGNILDMVLREDEDEEDEHDEDT ASEHEGQNKEPAKKKRKK" assembly_gap 2866366..2866376 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2881738..2881960 /estimated_length=223 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2885880..2885915 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2890230..2890264 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<2912766..>2928870) /locus_tag="PAL_GLEAN10009480" mRNA complement(join(<2912766..2912824,2913370..2913530, 2914350..2914558,2914673..2914841,2914962..2915084, 2916348..2916594,2916711..2916846,2917274..2917391, 2917491..2917544,2918317..2918477,2918944..2919051, 2919357..2919443,2919631..2919748,2920690..2920926, 2921796..2921922,2922062..2922213,2922317..2922499, 2923778..2923857,2924004..2924150,2924266..2924430, 2925273..2925372,2928254..>2928870)) /locus_tag="PAL_GLEAN10009480" /product="DNA polymerase subunit gamma-1" CDS complement(join(2912766..2912824,2913370..2913530, 2914350..2914558,2914673..2914841,2914962..2915084, 2916348..2916594,2916711..2916846,2917274..2917391, 2917491..2917544,2918317..2918477,2918944..2919051, 2919357..2919443,2919631..2919748,2920690..2920926, 2921796..2921922,2922062..2922213,2922317..2922499, 2923778..2923857,2924004..2924150,2924266..2924430, 2925273..2925372,2928254..2928870)) /locus_tag="PAL_GLEAN10009480" /note="GO_component: GO:0005760 - gamma DNA polymerase complex [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO_process: GO:0006260 - DNA replication [Evidence IEA]" /codon_start=1 /product="DNA polymerase subunit gamma-1" /protein_id="ELK18260.1" /db_xref="InterPro:IPR001098" /db_xref="InterPro:IPR002297" /db_xref="InterPro:IPR012337" /db_xref="UniProtKB/Swiss-Prot:P54098" /translation="MSRLLWKKVAGVVVGPGPVPAPGRWVSSSVSVPVPSDGQPQPQQ PQVPSSEGGQLRYNPLHIQMLSRGLHEQIFGPGGAMPVEAAVRRSVEHLQKHGLWGQP AAPLPDVELRLPPLYGGSLDQHFRLLAQKQSLPYLEAANSLLQAQLPPRPSSWAWAEG WTRYGPAGEAVPVAIPEEPALVFDVEVCLAEGTCPTLAVAISPSACAGGPAQREWQEQ LVVGHNVSFDRAHIKEQYLIQGSRMRFLDTMSMHMAISGLSSFQRSLWMAAKQGKHKA RHPTQRSQKSQSKASGPAISSWDWLDISSVNNLADVHSLYVGGPSLEKEPRELFVKGS MKDIRENFQDLMQYCARDVWATYEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQ NWERYLAEAQSTYEELQREMKKSLMDLANDACQLVSGERYKEDPWLWDLEWDLQEFKQ KKAKVKRKEPAATSNLPVEGAGVPGYPEDQEDPGPPSEEEELRRDVTARACFEQLKGT AELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRITPKLMALTWDGFPLH FSERHGWGYLVPGRRDNLAQVPEGTTLASAGVSCPYRAIESLYRKHCREQGKQQPELQ AGLAEEFLLTESSAVWQTVEELGFLEVEAEAKVESLQAVVPGQPPVLTGAGGPKASQP AYHHGSGPYNDVDIPGCWFFKLPHKDGNNFNVGSPFAKDFLPKMEDGTLQAGPGGASG PRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVTRHPDYDEEGRYGAILPQVVT AGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGD AHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFA ERLLMQFNHRLTRQEAAEKAQQMYAITKGLRRYRLSDEGEWLVTQLHLPVERTEDGWV SLQDLRKIQREASRKSRRKKWEVVAERAWMGGTESEMFNKLESIAMSDTPRTPVLGCR ISRALEPSAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDE VRYLVREEDRYRAALALQVTNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDQCLRKEVT MDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSLEK" assembly_gap 2918115..2918148 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2925403..2925470 /estimated_length=68 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2935807..2935878 /estimated_length=72 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2952189..2953337 /estimated_length=1149 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2963550..2963583 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2965866..2965882 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2967241..2967276 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2971033..2971079 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2973860..2974040 /estimated_length=181 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 2999392..2999403 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3014291..>3030411) /locus_tag="PAL_GLEAN10009481" mRNA complement(join(<3014291..3014458,3017157..3017230, 3017452..3017570,3017883..3018019,3018160..3018297, 3019790..3019956,3020659..3020806,3022172..3022235, 3022628..3022814,3030228..>3030411)) /locus_tag="PAL_GLEAN10009481" /product="Ammonium transporter Rh type C" CDS complement(join(3014291..3014458,3017157..3017230, 3017452..3017570,3017883..3018019,3018160..3018297, 3019790..3019956,3020659..3020806,3022172..3022235, 3022628..3022814,3030228..3030411)) /locus_tag="PAL_GLEAN10009481" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0055085 - transmembrane transport [Evidence IEA]" /codon_start=1 /product="Ammonium transporter Rh type C" /protein_id="ELK18261.1" /db_xref="InterPro:IPR001905" /db_xref="InterPro:IPR002229" /db_xref="UniProtKB/Swiss-Prot:Q19KI0" /translation="MAWNTNLRWRLPLTCLLLQVALVVLFGVFVRYDRDADAHWVEDK LHSNSSDLDNEFYYRYPSFQDVHVMIFVGFGFLMTFLQRYGYSSVGFNFMLAAFGIQW ALLMQGWFHSYQDGYILVGVENLINADFCVGSVCVAFGAILGKVKDAGGSMTIHTFGA YFGLTVTWILYRPNLYQSKERQSPVYHSDLFAMIGTLFLWMYWPSFNSAVSNHGDAQH RAAINTYCSLAACVLTAVALSSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYG SLIVGFICGIVSTLGFVYLTPYLESNLRIQDTCGIHNLHGIPGIIGGIVGAVTAACAN SKVYGQQGLAHAFEGLSTNWSASMQGSFQAAGIFVSLAMALVGGIIVGIILKLPIWGQ AADENCFDDDIYWEAPRPVPVLQKEPVQTKLGAREQEEQHLARWPGPGRLRPSHRLCP GGACPRMEKDL" assembly_gap 3019341..3019401 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3022020..3022145 /estimated_length=126 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3052620..3053322 /estimated_length=703 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3053487..>3088623 /locus_tag="PAL_GLEAN10009482" mRNA join(<3053487..3053576,3058403..3058682,3059655..3059893, 3061478..3061712,3062634..3062772,3065848..3065987, 3066878..3067096,3069903..3070054,3070820..3070920, 3071233..3071330,3071428..3071500,3071667..3071906, 3072432..3072528,3074319..3074376,3075864..3076007, 3079510..3079600,3080572..3080630,3081380..3081514, 3082083..3082240,3085371..3087495,3087618..3087743, 3088511..>3088623) /locus_tag="PAL_GLEAN10009482" /product="hypothetical protein" CDS join(3053487..3053576,3058403..3058682,3059655..3059893, 3061478..3061712,3062634..3062772,3065848..3065987, 3066878..3067096,3069903..3070054,3070820..3070920, 3071233..3071330,3071428..3071500,3071667..3071906, 3072432..3072528,3074319..3074376,3075864..3076007, 3079510..3079600,3080572..3080630,3081380..3081514, 3082083..3082240,3085371..3087495,3087618..3087743, 3088511..3088623) /locus_tag="PAL_GLEAN10009482" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18262.1" /db_xref="UniProtKB/Swiss-Prot:Q7Z2Z1" /translation="MEKLLPKRVQEVLIARKITLYWVDSTERSKLWESPDHLGYWTVY ELLYHVGGTILPSETFSQHCIKAGETLLGSDKKLSSEPRFSSWISIMPTDSTLNRLLY NSPEYEASFPRMEGTLFLPVEGKEIQETWTVTLEPLTMHQRHFQKPVRIFLKGTVTQW SLPMSDTLGTDSWMLQGPDESKSTQRTLFQQLLNRLTAEELHLVASVDPGEGWPPISG VISPLSTNTTILTLFHSEEAEFQRHFLQTVVTENSQETASVCFDVKDVVLNQIHSLRK DPTASGPAAPPVPEWAQQELGRTAPWSPAVLERWFLRSALSGASSNLMESFWLLQAAL SHKEEPSKTESELTRCLSELYLRKSREESAASNQEDGKKKRGVPRTPVRQKMNTMCRS LKMLNVARLNVKAQKLHPDGSPDATGEKGTQKTAAGRAADRLENRGRSLRSSKPKDFK TEEQLLSYIHENYQKTVAAEETVLYSCARNMISAIKAFLKAKGTQELEVNCLNQVKNN LLKTSKSLRQNIGKKLDKEEKVRECQLQVFLRLEVCLQCPSIQESVCDMEQVVEEANL LRMVCLTEDSAYLAKFLEEILGLYVDSIPKTLGSLYHSLGFVVPQQLVGVLPTDCFSD DSMTQESKSPLLSVPPTSSAHRSGSVGTVSDQLEELRTRSAKKRRKNALIRHKSIAEI SQNLRQIEIPKVTKRATKNENSHPSLQQPPLPGKDTVQEVTKVRRNLFNQEISPSKRP GKRGLPRSHSVSAVEGLEGKLASAAKTRGHHRLLTKSVPETPVHKQISRRLLHRQIKG RSSDTGPDIDVVDESPEKGDEPSLRRSPRIKQLSLGKTKSVSFYSASQPKSRSVQRVH SFQQDKSDQRDTSPVQSIRSPKSLLFAAVSEKISPSEKGSARIKRPSRSTVDSETPTA SETPKKSDWKSPSSSRTTLRGLCHTPQTLLCSPERLHRSPAAATPVKHVLSQSFKDSI LHASESPPPEVTLQKGHSLPEAGASLLGKMPKTPERPGSQPPAFVPNGTGPPSVNSRP KSTSSPAVPVLSTAQTWRESPAPAGHCLQWSPRAAAERACGATASAGTPQGPQPPRPQ APGAAPPQPWKDPVLTAPDGPRDPTMTPSPPVSPKEPCNSPLCDISKSPLEKSFTESF PTGQRDGKDAQTSSHIATQLSCPAPSTPAKTSQTALSAIVPPPPPSKSGKRHRKTSNP EKSFLECQPHTSAAPRAGVTGNADARKDQKEVNAAPQPSPERHRDPGTGFGSDCHTAS PWLVAEDTEYLSLVDGAEDHVSDDLQSDVSLVGGGKGLKMQGTDEPSLTNPGSPLSPP SSGPSSPFSPSCTLQHSAHKRRPQAAVQLESLASPRLPGAPGSPQTYEMELEMPASGL PKLRIKKVDASSLSEAEPPRRDEGARPGLSTSSAKAETAYMSPPCPRPSHSTPGKGGG QTYICRSCTPTHCPSSTPCPSQTDGGVPWTPSPKHSGKTTPDSIKDWPRRKRAVGCCL GPAAGRAAVATELSGCVSLLQPQGEEPGFGLGIRQTPFLGDFELEGVCQLPDQSPPRD SVTEAEEGFSGAQFGLGSRKRLLSAKGEAERPAKRTCDEQREGVEVPESEERSPSAGA PRLPATGDDEGFGSGSASPSGCAVRSCLSASGLQALTQSPLLFGGRTPCSRRRDPGDE DVDVFPPLADDSPFSQSFSRRRPISRTYTRKKLIS" assembly_gap 3057919..3058079 /estimated_length=161 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3067593..3068456 /estimated_length=864 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3076284..3076728 /estimated_length=445 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3082602..3084636 /estimated_length=2035 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3089960..>3102734) /locus_tag="PAL_GLEAN10009483" mRNA complement(join(<3089960..3090693,3090775..3090973, 3091641..3091847,3092445..3092660,3093055..3093231, 3093351..3093476,3093840..3094037,3095090..3095292, 3097814..3097960,3098122..3098237,3098613..3098749, 3099492..3099784,3100236..3100389,3101466..3101604, 3101818..3102211,3102575..>3102734)) /locus_tag="PAL_GLEAN10009483" /product="Kinesin-like protein KIF7" CDS complement(join(3089960..3090693,3090775..3090973, 3091641..3091847,3092445..3092660,3093055..3093231, 3093351..3093476,3093840..3094037,3095090..3095292, 3097814..3097960,3098122..3098237,3098613..3098749, 3099492..3099784,3100236..3100389,3101466..3101604, 3101818..3102211,3102575..3102734)) /locus_tag="PAL_GLEAN10009483" /note="GO_function: GO:0003777 - microtubule motor activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0007018 - microtubule-based movement [Evidence IEA]" /codon_start=1 /product="Kinesin-like protein KIF7" /protein_id="ELK18263.1" /db_xref="InterPro:IPR001752" /db_xref="UniProtKB/Swiss-Prot:Q2M1P5" /translation="MAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEAGTASRDIQ LREDDRGNVVLCGVKEVDVEGLDEVLSVLEMGNAARHTGATHLNRLSSRSHTVFTVTL EQRGRTPSRLPRQAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALG NVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLN YASRAQNIRNRATEDEGALLALQSQVARLEEENRDFLAALEDAMEQYKLQVRPARHGG GRLPGGEPCSSAPAPIRVPHQHLDHVLQSDRLREQQEEMEELRLRLELVRPGWGAPGL LQGLAPGSFVPRPHTAPLGGVHSHVLGMVPPACLPGDAVGPENGVEVTDGREAGVKLL EETDRLEGGSSTASEDEEEEGEQPPPQRTLHLRRDGISKGSQRPEAGPGSPHSRKDSE LRLEELGAAVLEPRAVRGSKAQARPHQAPAASEWRLAQAQQKIRELAINIRMKEELIG ELVRTGKAAQALNRQHSQRIQELEQEAERVRAELNEGQRQLRELEGREPQDAGERTQL QEFRKRVAAAQSQVQVLKEKKQATERLASLSAQSEKRLQELERNVQLMRQQQGQLQRR LREETEQKRRLEAEMSKRQHRVKELELKHEQQQKVLRIKTEEIAAFQRKRRSGSSGSV VSLEQQQKIEEQKKWLDQEMEKALQQRRALEELGEELRKREAILAKKEALMQEKTGLE SKRLRSSQALTEDIVRVSSRLEHLEKELSEKSGQLRQGSAQSQQQIRGEIDALRQEKD LLLKQRLEIDGKLRRGSLLSPEEERTLFQLDEAIEALDAAIEYKNEAITCRQRVLRAS ASLLSQCEMNLMAKLSYLSSSETRALLCKYFDKVVTLREEQHQQQVAFSELEMQLAEQ QRLVYWLEVALERQRLEMDRQLTLQQKEHEQNVQLLLQQSRDHLGEGLADSKRLYETR IQALEKELGRHMWMNQELKQKLSGVDATGQSRGQCHRPRLDPMSGFFLCSGKFVGSSP GRPRHLQLLLGHFICSSLCWVLGSSGSRELPMPPHLTRMSFSLSVTGGEKRTLCLENR LPPGNEDEPHPAPEVLWQPPVAEGSARAREDVRDLVRAPLPLTWKRSSLCGEEQGSPE DRRQWEAAEPLLGRAVPVGEGSLPWNLGPLARPRRELLRRASPGMIDVRRNPL" assembly_gap 3101158..3101456 /estimated_length=299 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3103912..>3104247) /locus_tag="PAL_GLEAN10009485" mRNA complement(<3103912..>3104247) /locus_tag="PAL_GLEAN10009485" /product="Kinesin-like protein KIF7" CDS complement(3103912..3104247) /locus_tag="PAL_GLEAN10009485" /note="GO_function: GO:0003777 - microtubule motor activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0007018 - microtubule-based movement [Evidence IEA]" /codon_start=1 /product="Kinesin-like protein KIF7" /protein_id="ELK18264.1" /db_xref="InterPro:IPR001752" /db_xref="UniProtKB/Swiss-Prot:Q2M1P5" /translation="MGLEAQRPPGAEEAPVRVALRVRPLLPKELLHGHQSCLRVEPGQ GRVTLGRDRRFGFPVVLDEDAGQEAVYQACVQPLLEAFFQGFNATVFAYGQTGSGKTY TMGEASVGE" assembly_gap 3107989..3108103 /estimated_length=115 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3111944..>3121346) /locus_tag="PAL_GLEAN10009486" mRNA complement(join(<3111944..3112273,3113172..3113426, 3113801..3114097,3115472..3115632,3115944..3116208, 3117101..3117183,3118499..3118703,3121302..>3121346)) /locus_tag="PAL_GLEAN10009486" /product="Perilipin-1" CDS complement(join(3111944..3112273,3113172..3113426, 3113801..3114097,3115472..3115632,3115944..3116208, 3117101..3117183,3118499..3118703,3121302..3121346)) /locus_tag="PAL_GLEAN10009486" /codon_start=1 /product="Perilipin-1" /protein_id="ELK18265.1" /db_xref="InterPro:IPR004279" /db_xref="UniProtKB/Swiss-Prot:Q8CGN5" /translation="MAVNKGPALLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTST KESHPLVASVCNAYEKGVQGASSLAAWGMEPVVRRLSTQFIAANDLACRGLDHLEEKI PALQYPPEKIASELKDTISSRLRSARNSISAPIASTSDKVLGAALAGCELAWGAAKDT ADYAANTRAGRLASGGADLALGGVEKVVEFLLPPAKESSGRPRTQKPPKAKPSLVSRV GALANTVSQHTFQTTVGVLKQGHALAMWIPGMAPLHSLLGRALLTSCPHRAGKGLAVG TVKPEAATFAPQSSLAQWGASAAMQVVSRRQSEVRVPWLHNLAASQDEDHDEQTDTEG EEAEQEDESETEEKQLSEVAALPSPQGLLGSVAHSLHKALHSAVSAVTWAPAAVLGTA GRVLRLTPARAAPHAGSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEF RDIEEVVRQEAERRGSGVLPAGPEPTPRPAQHRGSLRSTRGLSLEDRGDPPAAPRPAF PASPREKPARRVSDSFFRPSVMEPILGRAQYSQLRKKS" gene complement(<3125490..>3130841) /locus_tag="PAL_GLEAN10009487" mRNA complement(join(<3125490..3126058,3128101..3128216, 3130786..>3130841)) /locus_tag="PAL_GLEAN10009487" /product="Peroxisomal membrane protein 11A" CDS complement(join(3125490..3126058,3128101..3128216, 3130786..3130841)) /locus_tag="PAL_GLEAN10009487" /codon_start=1 /product="Peroxisomal membrane protein 11A" /protein_id="ELK18266.1" /db_xref="UniProtKB/Swiss-Prot:O75192" /translation="MDAFIRFTNQTQGRDRLFRATQYTCMLLRYLLEPKAGKEKVVMK LKELESSVSTGRKWFRLGNVVHAVQATQQSTHATDLVPRVCLTFANLNRVVYFICDTV LWVRSVGLTSGINQEKWRMWAARHYYYSVLLSLVRDLYEISLQMEQVAHDRAKREKSL SQDPLGYSVAKEETEWLQSFLLLFRSLRKHPPLLLDTVKNLCDILSSLDQLGIYKSNP GVIGLGGLVSSIAGIITVACPHMKLKTN" gene <3132394..>3133587 /locus_tag="PAL_GLEAN10009488" mRNA join(<3132394..3132720,3133369..>3133587) /locus_tag="PAL_GLEAN10009488" /product="WD repeat-containing protein 93" CDS join(3132394..3132720,3133369..3133587) /locus_tag="PAL_GLEAN10009488" /codon_start=1 /product="WD repeat-containing protein 93" /protein_id="ELK18267.1" /db_xref="UniProtKB/Swiss-Prot:Q6P2C0" /translation="MLPVPPSAMSSPIGSRAHKMRLPIFTRKGLLEVPSPTEKDWPKD DEEDYVFKDPDQELDSLPQPYRMINKLVNLLFDRSWEVIEERDTLREAELNRIQPTVY PPVFEIKFNKMPNCMAISQDYVFIGGAKGFSVYNLYDAKRMYVWDKLKVDVTSIWATD LGSDTLIAPVDEMGTCSSSSF" gene <3137988..>3179972 /locus_tag="PAL_GLEAN10009489" mRNA join(<3137988..3138213,3146975..3147152,3148348..3148418, 3149008..3149094,3149989..3150149,3153473..3153585, 3154371..3154510,3154835..3155036,3159154..3159210, 3160625..3160694,3179703..>3179972) /locus_tag="PAL_GLEAN10009489" /product="WD repeat-containing protein 93" CDS join(3137988..3138213,3146975..3147152,3148348..3148418, 3149008..3149094,3149989..3150149,3153473..3153585, 3154371..3154510,3154835..3155036,3159154..3159210, 3160625..3160694,3179703..3179972) /locus_tag="PAL_GLEAN10009489" /codon_start=1 /product="WD repeat-containing protein 93" /protein_id="ELK18268.1" /db_xref="UniProtKB/Swiss-Prot:Q6P2C0" /translation="MADSTKQGGSVRQKLYRGTAGESRRTITEMRPQVSSRLNAGSRL SYHRKRTENLSRRSKSSENQATESSAPGAEYGTTFKSPLEVFAKIEDCYGLGSGQNHF IKDSQWEQQAAIFNATYKKYLDLDGECEEEPPNMATFHFLLPSCITVMPTEVKSPAGV ACVLGVHWTGCHNFFLYSLNRTLKDKVDPEGVWPCAAPIAVSQLSYSSSYLVLACEDG VLTVWDMAEGEPPPLPGTWVDLQGEGPAGPPEEALGEPGAQQRLEVFKAGDRRVPPVR EKWGGSVHLRDVAKRQIVCAFAPPSPCRLALPWKPVFVVSSHHPCFLLRGDRPDETEP TDDTEDSQNSVFYFHFNAYPLLENVLRNCNVSQVDLTEDMAFPHVLPLEKRCENLLQK RFQKLENKVKEQEHWTRLRRIPVSRFTSLSHPYDGRISWSLPQGISGSQESSLLPENP PLLPRPTYQRLQPQTQWGCWSHSAEVLPSSEDQEPGPAFQPSDESPLQNSGLQLSGCP ELWQEDIEGGHLGIFY" assembly_gap 3138501..3138716 /estimated_length=216 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3145143..3145168 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3162838..3163391 /estimated_length=554 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3172487..3172567 /estimated_length=81 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3178217..3178540 /estimated_length=324 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3184154..>3200217) /locus_tag="PAL_GLEAN10009490" mRNA complement(join(<3184154..3184306,3187193..3187274, 3187689..3187829,3188612..3188779,3188903..3189013, 3189470..3189561,3192078..3192225,3193112..3193167, 3193257..3193390,3194655..3194734,3195000..3195175, 3196835..3196900,3197066..3197131,3197315..3197458, 3197568..3197681,3197941..3198095,3198179..3198305, 3198704..3198843,3198956..3199098,3199598..>3200217)) /locus_tag="PAL_GLEAN10009490" /product="Aminopeptidase N" CDS complement(join(3184154..3184306,3187193..3187274, 3187689..3187829,3188612..3188779,3188903..3189013, 3189470..3189561,3192078..3192225,3193112..3193167, 3193257..3193390,3194655..3194734,3195000..3195175, 3196835..3196900,3197066..3197131,3197315..3197458, 3197568..3197681,3197941..3198095,3198179..3198305, 3198704..3198843,3198956..3199098,3199598..3200217)) /locus_tag="PAL_GLEAN10009490" /note="GO_function: GO:0008237 - metallopeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Aminopeptidase N" /protein_id="ELK18269.1" /db_xref="InterPro:IPR014782" /db_xref="UniProtKB/Swiss-Prot:P15145" /translation="MAKGFYISKSLGILAILLGVAAMCTIIALSIVYAQEKNKNVENS SQAPTSPATSPATSPATTVATTLDQSEPWNQYRLPQTLAPESYQVTLRPYLTPNENGL YIFKGSSTVRFICKEPTNVIIIHSKKLNYTTTEGHRVVLRGVGSSQAPAIDRTELVEL TEYLVVHLKDSLQAGSLYEMDSEFEGELADDLAGFYRSEYTDGDVKKVLATTQMEATD ARKSFPCFDEPAMKATFNITLIHPSNLTALSNMLPKGPSVPLTEDPTWNVTEFHTTPV MSTYLLAYIVSEFTCVEEMASNSVLIRIWARPSATRENQGLYALNVTGPILSFYAQHY DTPYPLDKSDQIGLPDFNAGAMENWGLVTYRENSLLFDSLSSSTSNKERVVTVIAHEL AHQWFGNLVTIAWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVVNDVYSVMAVDA LASSHPLSTPAQEVSTPAQISEMFDSISYSKGASVLRMLSNFLTEDLFKKGLASYLHT FAYQSTTYLDLWEHLQKAVDNQTSISLPNTVSAIMDRWILQMGFPLITVDTTTGSISQ QHFLLDPDSNVTRPSDFNYLWIVPISSIRNGVEQDSYWLEDTRETQSDLFKTTADEWV LLNLNVTGYYQVNYDEDNWRKIQTQLQTNLSAIPVINRAQVIHDAFDLASAHIVSVTL ALNNTLFLIKETEYMPWEAALSSLNKFKLMFDRSEVYGPMQNYLRKQVTPLFQHFKNV TKTWTQRPENLMDQYNEINAISTACSNGLSECEELVSSLFSQWMNNTDNNPIHPNLRS TVYCNAIAQGGEDEWNFAWEQFRKATLVNEADKLRTALACSRQVWILNRYLSYTLNPD LIRKQDATSTIISIANNVIGQSLAWDFIQSNWKTLFQDYGSGSFSFSNLIQGVTRRFS TEFELQQLEQFQENNKDVGFGSATRAMEQALEKTKANIKWVKENKEVVLAWFTENST" assembly_gap 3198395..3198448 /estimated_length=54 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3209270..3209301 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3211884..3211894 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3221698..>3259249) /locus_tag="PAL_GLEAN10009491" mRNA complement(join(<3221698..3221826,3223432..3223539, 3245691..3245762,3255314..3255425,3255840..3255931, 3259181..>3259249)) /locus_tag="PAL_GLEAN10009491" /product="AP-3 complex subunit sigma-2" CDS complement(join(3221698..3221826,3223432..3223539, 3245691..3245762,3255314..3255425,3255840..3255931, 3259181..3259249)) /locus_tag="PAL_GLEAN10009491" /note="GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="AP-3 complex subunit sigma-2" /protein_id="ELK18270.1" /db_xref="InterPro:IPR011012" /db_xref="InterPro:IPR022775" /db_xref="UniProtKB/Swiss-Prot:Q5RDP9" /translation="MIQAIMVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDD NICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFE NVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPAR AVSAVKNINLPEIPRNINIGDLNIKVPNLSQFV" assembly_gap 3246437..3246458 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3264858..>3340469) /locus_tag="PAL_GLEAN10009492" mRNA complement(join(<3264858..3265036,3265404..3265610, 3266300..3266432,3269011..3269086,3340303..>3340469)) /locus_tag="PAL_GLEAN10009492" /product="hypothetical protein" CDS complement(join(3264858..3265036,3265404..3265610, 3266300..3266432,3269011..3269086,3340303..3340469)) /locus_tag="PAL_GLEAN10009492" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18271.1" /db_xref="InterPro:IPR018889" /db_xref="UniProtKB/Swiss-Prot:Q17QU3" /translation="MPACALGPLDTLQAEPATAIGTTATVPNVSLRSGAHTHSALWCS PATYAGHYGLSRGNGVLLEGELVDVSPHSISDAHGRKERYYVLYIRPSCIHRRKFDPK GNEIEPNFSATRKVNTGFLMSSYKVDAKGDTDRLTPEALKELVNKPELLALTESLTPA QTVAFWMPESEMEALELELGAGVRLKTRGDSPFLDSLAKLEAGTVTKCNFAGDGKTGA SWTDNIMAQKSSEPASAETREQGDGAEDEEWVGKG" assembly_gap 3270358..3270462 /estimated_length=105 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3293439..3293663 /estimated_length=225 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3295835..3296229 /estimated_length=395 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3312992..3313805 /estimated_length=814 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3336148..3336173 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3338513..3338641 /estimated_length=129 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3356772..>3363970 /locus_tag="PAL_GLEAN10009494" mRNA join(<3356772..3358229,3360821..3361012,3361798..3361972, 3363801..>3363970) /locus_tag="PAL_GLEAN10009494" /product="Zinc finger protein 710" CDS join(3356772..3358229,3360821..3361012,3361798..3361972, 3363801..3363970) /locus_tag="PAL_GLEAN10009494" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 710" /protein_id="ELK18272.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q8N1W2" /translation="MEGFMDSGTQTDAVVVLSLAQAAVLGLVSENELFGATISAEAFY PDLGPELSGASIGEPGPPGPDVYQLACNGRALEEPVEEEVLEVEAAFEKHTRRKTRPP VRLVPKVKFEKVEEEEEQDVYEVSVPGDKDTGPAEAPAEVAGGGCEALVQSSSVKMID LSAFSRKPRTLRPLPRAPRPELDVTPYDPHFPDPARGGFPEPSMALPGPEALPAECGF EPPHLAPLSDPEAPTMESPEPVKPEQGFVWQEAGEFEADAAGSTVERHKKAQLDRLDI NVQIDDSYLVEAGDRQKRWQCRMCEKSYTSKYNLVTHILGHNGIKPHSCPQCSKLFKQ PSHLQTHLLTHQGTRPHKCQVCQKAFTQTSHLKRHMLLHSEVKPYSCHFCGRGFAYPS ELKAHEVKHESGRCHVCVECGLDFSTLTQLKRHLASHQGPTLYQCLECDKSFHYRSQL QNHMLKHQNVRPFVCTECGMEFSQIHHLKQHSLTHKGVKEFKCEVCGREFTLQANMKR HMLIHTSVRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHM HLHAGSKPFKCPYCSSKFNLKGNLSRHMKVKHGVMDIGLDSQDPMMELTGTDPSELDS QQEMEDFEENAYAYAGVDSSTEASVLTEQAMKEMAYYNVL" assembly_gap 3361238..3361535 /estimated_length=298 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3364129..>3364359) /locus_tag="PAL_GLEAN10009495" mRNA complement(<3364129..>3364359) /locus_tag="PAL_GLEAN10009495" /product="hypothetical protein" CDS complement(3364129..3364359) /locus_tag="PAL_GLEAN10009495" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18273.1" /translation="MALPTLAAPALLGLETPENLCPCDLSPNGPHQHVPHLPQQRAEE TQTWASELPFLPRTSGAYAWFTAEASSTVHLV" gene complement(<3368161..>3381852) /locus_tag="PAL_GLEAN10009496" mRNA complement(join(<3368161..3368242,3368699..3368791, 3368881..3368978,3369150..3369262,3370855..3371006, 3371180..3371316,3371722..3371865,3371950..3372110, 3373472..3373637,3374580..3374671,3381738..>3381852)) /locus_tag="PAL_GLEAN10009496" /product="Isocitrate dehydrogenase [NADP], mitochondrial" CDS complement(join(3368161..3368242,3368699..3368791, 3368881..3368978,3369150..3369262,3370855..3371006, 3371180..3371316,3371722..3371865,3371950..3372110, 3373472..3373637,3374580..3374671,3381738..3381852)) /locus_tag="PAL_GLEAN10009496" /note="GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_function: GO:0051287 - NAD or NADH binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Isocitrate dehydrogenase [NADP], mitochondrial" /protein_id="ELK18274.1" /db_xref="InterPro:IPR001804" /db_xref="UniProtKB/Swiss-Prot:P48735" /translation="MAGYLRVVRSLGRASGSGPAWAPAALTGPNLQDQPRRHYADKRI KVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPHRDKTDDQVTIDSAL ATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRL VPGWTKPITIGRHAHGDQYKATDFVADRAGTFKMVFTPKDGSGVKEWEVYNFPAGGVG MGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFDKHYKT DFDKNKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVL VCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLV RFSQTLEKVCVQTVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTIKNNLDKALG " assembly_gap 3368371..3368409 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3388856..3388866 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3405024..3405039 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3406630..3406664 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3409968..3410455 /estimated_length=488 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3412593..3412618 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3419878..3420191 /estimated_length=314 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3423229..3423274 /estimated_length=46 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3424044..3424949 /estimated_length=906 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3435391..3435872 /estimated_length=482 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3443011..>3457221 /locus_tag="PAL_GLEAN10009500" mRNA join(<3443011..3443035,3448469..3448632,3448807..3448869, 3450442..3450540,3451096..3451207,3451451..3451564, 3451706..3451857,3452667..3452848,3452966..3453116, 3454147..3454357,3454459..3454574,3454829..3454995, 3456141..3456226,3456491..>3457221) /locus_tag="PAL_GLEAN10009500" /product="Semaphorin-4B" CDS join(3443011..3443035,3448469..3448632,3448807..3448869, 3450442..3450540,3451096..3451207,3451451..3451564, 3451706..3451857,3452667..3452848,3452966..3453116, 3454147..3454357,3454459..3454574,3454829..3454995, 3456141..3456226,3456491..3457221) /locus_tag="PAL_GLEAN10009500" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0004872 - receptor activity [Evidence IEA]; GO_process: GO:0007275 - multicellular organismal development [Evidence IEA]" /codon_start=1 /product="Semaphorin-4B" /protein_id="ELK18275.1" /db_xref="InterPro:IPR001627" /db_xref="InterPro:IPR002165" /db_xref="InterPro:IPR003659" /db_xref="InterPro:IPR016201" /db_xref="UniProtKB/Swiss-Prot:Q9NPR2" /translation="MDPRAEASGSEKRPFLSFQAGNISNYTALLLSRDGKTLYVGARE ALFALNSSVSFLPGGEYQELLWRADAERKQQCSFKGKDPQRDCQNYIKILLPLNSSHL YVCGTGAFSPLCTYVNVENFTLAQDRAGSILLEDGKGRCPFDPNFKSTALVVDGELYT GTVSNFQGNDPAISRSQTLRPTKTESSLNWLQDPAFVASAYIPESLGSVEGDDDKIYF FFSETGQEFEFFDNTIVSRIARICKGDKGGERILQQRWTSFLKAQLLCSRPDDGFPFN VLQDVFMLSPNPEDWRDTLFYGVFTSQWHRGTTEGSAICVFTMKDVHRAFSGLYKEVN RETQQWYTVTYPVPTPRPGACITNSAREKKINSSLQLPDRVLNFLKDHFLMDSQVRSR LLLLQPQARYQRVAVHRVPGLHHTYDVLFLGTGDGRLHKAVSVGPKVHIIEELQIFSP GQPVQNLLLDPDRGLLYAASHAGVVQVPVANCSLYRSCGDCLLARDPYCAWSGSSCRH ISLYPREAASRPWIQDIEGANARGLCNTSLAKARISLPTDETLCEQVQFQPNTVNSLA CPLLSNLATRLWLHNGAPVNASASCRVLPTGDLLLVGSQQELGVFQCWSLEENFQQLV ASYCPKIEDTVAQQSGKAPAVISTSRVSSPAQSNASWRVDKSYWTEFLVMCTLFVFAV VLLILFFLYRHRGGMKVFLKQGECASVHPKTRPVVLPPETRPLNGVGPPSTSLDHRGY QALLDSSPGPRVFTESEKRPLSIHDSFVEVSPVCPRPRVRLGSEIRDSVV" gene complement(<3458908..>3461568) /locus_tag="PAL_GLEAN10009501" mRNA complement(join(<3458908..3458929,3459166..3459254, 3459337..3459455,3459596..3459746,3460240..3460348, 3461352..3461386,3461518..>3461568)) /locus_tag="PAL_GLEAN10009501" /product="Calcium and integrin-binding protein 1" CDS complement(join(3458908..3458929,3459166..3459254, 3459337..3459455,3459596..3459746,3460240..3460348, 3461352..3461386,3461518..3461568)) /locus_tag="PAL_GLEAN10009501" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="Calcium and integrin-binding protein 1" /protein_id="ELK18276.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:Q17QE5" /translation="MGGSGSRLSKELLAEYQDLTFLTKQEILLAHKRFCELLPQEHRS VEESLQARVSLEQILSLPELKANPFKERICRVFSTSPTRDSLSFEDFLDLLSVFSDTA TPDIKSHYAFRIFDFDDDGTLNREDLSQLVNCLTGEGEDTRLSASEMKQLIDNILEES DIDRDGTINLSEFQHVISRSPDFASSFKIVL" gene <3466918..>3468075 /locus_tag="PAL_GLEAN10009502" mRNA <3466918..>3468075 /locus_tag="PAL_GLEAN10009502" /product="hypothetical protein" CDS 3466918..3468075 /locus_tag="PAL_GLEAN10009502" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18277.1" /db_xref="UniProtKB/Swiss-Prot:Q6ZNW5" /translation="MAVPHDSSNTSYLLPPNKEEWEGQGIPDFVYGQKELVWEGVQWP RNAPSLPDRLPLSRFDAALRSAWRQRMELGLFRYCLGELQTQTLPGAVGFVAQLNMER GMQRRRPQNIRSVRQPFDPEQFNFNKIQPGEVLFRLRQEPGLSGVLQQEDILVVINIS PLEWGHVLLVPEPAQGLPQRLLPGVLRAGLEAVLLSAHPGFRVGFNSLGGLASVNHLH LHGYYLDHRLPVEGAPSKTLDPGGHLHLLQALPAPGFLFYTSGPGPDLEALVSRVCRA TDYLTDHEIAHNLFVTRGAPPGKTSPSSALMGVRVILWARKSSFGIKEGEAFNVALCE LAGHLPVKTSQDFSGLTEAAALALIQDCLLPPAQAEEVQAALVALAAQEEQ" assembly_gap 3470604..3470637 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3471325..>3480722 /locus_tag="PAL_GLEAN10009503" mRNA join(<3471325..3471584,3471925..3471965,3472659..3472777, 3474052..3474182,3474381..3474537,3474945..3475088, 3475374..3475459,3475775..3476006,3476465..3476649, 3478063..3478248,3478541..3478730,3479012..3479191, 3479770..3480088,3480469..>3480722) /locus_tag="PAL_GLEAN10009503" /product="Tubulin polyglutamylase TTLL13" CDS join(3471325..3471584,3471925..3471965,3472659..3472777, 3474052..3474182,3474381..3474537,3474945..3475088, 3475374..3475459,3475775..3476006,3476465..3476649, 3478063..3478248,3478541..3478730,3479012..3479191, 3479770..3480088,3480469..3480722) /locus_tag="PAL_GLEAN10009503" /note="GO_function: GO:0004835 - tubulin-tyrosine ligase activity [Evidence IEA]; GO_process: GO:0006464 - protein modification process [Evidence IEA]" /codon_start=1 /product="Tubulin polyglutamylase TTLL13" /protein_id="ELK18278.1" /db_xref="InterPro:IPR004344" /db_xref="UniProtKB/Swiss-Prot:A6NNM8" /translation="METSTCKTSESEEDYVEEEESEEECDKGEVPIPSNPSQQAVSKT DCKAFGNGVPLCIIATKIPEKITTPADIDDLEVGRRKRRRKCRPLTINLTNCKYESVR RAAQMCGLKEVGEEEEWNVYWTDYSVSLERVMDMKRFQKINHFPGMTEICRKDLLARN LNRMQKLYPTEYNIFPRTWCLPADYGDFQSYGRQRRTRAYICKPDSGCQGRGIFITRN PREIKPGEHMICQQYISKPFLIDGFKFDMRIYVLITSCDPLRIFMYEEGLARFATMPY VEPMYNNLDDVCMHLTNYAINKHNENFVRDDAMGSKRKLSTLNAWLQEHSYDPREMWG GIEDIIIKTIISAHSVLRHNYRTCFPQYLSGGTCACFEILGFDILLDHKLKPWLLEVN HSPSFTTDSRLDREVKDALLCDAMTLVNLRGCDKRKMMEEDKRRVKERLFQCHQQSRE ARREQTESSHAALLDQERYEDSHLGGYRRIYPGPDTEKYAPFFKNNGSLFQETAASKA REECARQQLEEIRLKQEQQETSSTKRRKENKEQNQGESAEEKSRPRVRIRDFSTHLAY RNRNREKEESELLPGHLDSMQPQEIVEEEELERMKALLQRENLIRSLGIVEQITRMLH PSRRGQKKHHEYRPRFHQDGLGSQELQSVSLFPLVLLRGAAKEQGPPHFLHPVGPQEL IPRILGPLPSTNAALLHHSQCHLQPRNLNWIRNPAAFGPCSLSMKKSGRRYFPSARVR LTSQGQASRRLEAINRTLAGSVPPSLIPKQGYFLQPERVVSGPWTECTLPSMVNFGHR AAKAGDLLCPASAPLMQSTAALLDISHHR" gene <3481435..>3485070 /locus_tag="PAL_GLEAN10009504" mRNA join(<3481435..3481598,3481946..3482056,3484461..>3485070) /locus_tag="PAL_GLEAN10009504" /product="Neugrin" CDS join(3481435..3481598,3481946..3482056,3484461..3485070) /locus_tag="PAL_GLEAN10009504" /codon_start=1 /product="Neugrin" /protein_id="ELK18279.1" /db_xref="InterPro:IPR010487" /db_xref="UniProtKB/Swiss-Prot:Q9NPE2" /translation="MAGTLGLLLGGRVRAAVARCGLATRGVAGPGTIGREPDPDSDWE PEERELQEVESILKRQKKAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHKEFAECW SVPRLAEGFDVSTDVIRRILKSKFVPTLEQKLKQDQKVLKKAELAHPLRQLPGSRDTW KLPSAGRSLSGSLLMPGGEASSQGQGHSTALKVIEPNTHSINTPRRQKGRNKGIQSLE KESPVPVSAALGPQREVQKYTSDCCGTRKTDIDGLPSEKKLEALKAGEPGDQNFSSKV VQKGREFFDDNGNFLYRI" gene <3489323..>3550705 /locus_tag="PAL_GLEAN10009505" mRNA join(<3489323..3489418,3492353..3492433,3492779..3492840, 3493988..3494037,3494193..3494260,3496758..3496803, 3497820..3497914,3499244..3499348,3499857..3499953, 3500176..3500253,3500447..3500520,3500779..3500865, 3501056..3501146,3501364..3501438,3501659..3501723, 3501848..3501902,3502857..3502903,3503423..3503555, 3504143..3504216,3504586..3504687,3504866..3504941, 3505053..3505235,3507325..3507407,3539518..3539667, 3539975..3540122,3540881..3541017,3550634..>3550705) /locus_tag="PAL_GLEAN10009505" /product="Vacuolar protein sorting-associated protein 33B" CDS join(3489323..3489418,3492353..3492433,3492779..3492840, 3493988..3494037,3494193..3494260,3496758..3496803, 3497820..3497914,3499244..3499348,3499857..3499953, 3500176..3500253,3500447..3500520,3500779..3500865, 3501056..3501146,3501364..3501438,3501659..3501723, 3501848..3501902,3502857..3502903,3503423..3503555, 3504143..3504216,3504586..3504687,3504866..3504941, 3505053..3505235,3507325..3507407,3539518..3539667, 3539975..3540122,3540881..3541017,3550634..3550705) /locus_tag="PAL_GLEAN10009505" /note="GO_process: GO:0006904 - vesicle docking involved in exocytosis [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="Vacuolar protein sorting-associated protein 33B" /protein_id="ELK18280.1" /db_xref="InterPro:IPR001619" /db_xref="InterPro:IPR007145" /db_xref="UniProtKB/Swiss-Prot:Q9H267" /translation="MAFPHRPDAPELPDFSLLKRLARDQLIYLLEQLPGKKDLFIEAD LMSPLDRIANVSILKQHEVDKLYKMENKPALSSSEQLCFLVRPRIKNMRYIANLVNAD KLAGRTRKYKVIFSPQKFYACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEF FRDYFLEGDQRWINTVAQTLQLLSTLYGPFPHCYGIGRCAKMSHELWRKLEEEEDGET KGRRPEIGHVFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSDRSLK VLLNAEDKVFNEIRNEHFSNVFGFLSQKARNLQAQYDRRRGMDIKQMKNFVSQELKGL KQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLEGFSIRESTSYIEEHIDRQVS PIESLRLMCLLSITENGLIPKDYRSLKTQYLQSYGPEHLLTFSNLRRAGLLTEQAPGE TLTAMESKVSKLVTDKAAEKITDAFSSLAKRSNFRAISKKLNLIPRVDGEYDLKVPRD MAYVFSGAYVPLSCRIIEQVLERRSWQGLDDVLRLLHCSELAFTGVTKEDKASSESLR LLLSAAKAFTGAWPRRVGWRDREEGRMQHAVLAPAENRSTESNLIPTASELQCQGHGS KIASSLDTMLVLGTCLKLEMQKSQNEAACEDLRARIRELWDRLQIPTEERQAVALVAT GSKAKVKKALQLEVDRLEELKRQNMKKVVDAIRVELAHYWDLCFYSQEQRQAFAPYYD EEPTENLFRLHDAEIVRLRNYYEVHKDLFEGVHKWEESWRLFLEFERELSKVSKSDAT SRILNSTDIQS" assembly_gap 3498330..3499166 /estimated_length=837 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3505248..3506052 /estimated_length=805 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3508386..3521557 /estimated_length=13172 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3526181..3526231 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3537289..3539500 /estimated_length=2212 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3541382..3541736 /estimated_length=355 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3542265..3550556 /estimated_length=8292 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3570332..>3573690) /locus_tag="PAL_GLEAN10009506" mRNA complement(join(<3570332..3570531,3571060..3571089, 3571639..3571809,3572165..3572263,3573645..>3573690)) /locus_tag="PAL_GLEAN10009506" /product="RCC1 domain-containing protein 1" CDS complement(join(3570332..3570531,3571060..3571089, 3571639..3571809,3572165..3572263,3573645..3573690)) /locus_tag="PAL_GLEAN10009506" /codon_start=1 /product="RCC1 domain-containing protein 1" /protein_id="ELK18281.1" /db_xref="InterPro:IPR000408" /db_xref="InterPro:IPR009091" /db_xref="UniProtKB/Swiss-Prot:A6NED2" /translation="MAGVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSLVEDKKA VAGQAIRLNKDGSEENRIVEAEDGAPAAFISVQPFPALLDLPLGSDAVKASCGSRHTA VVTRTGELYTWGWGKYGQLGHKDTTSWDRPCRVEYFVDKQLQVMAVSCGPWNTYVYAV EKEKSRHVDEGMKCAYSTIKN" assembly_gap 3573856..3574406 /estimated_length=551 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3577001..>3588519) /locus_tag="PAL_GLEAN10009508" mRNA complement(join(<3577001..3577258,3577404..3577559, 3577665..3577782,3578524..3578639,3578861..3579080, 3579190..3579236,3579440..3579580,3579891..3580032, 3580272..3580366,3581183..3581483,3582083..3582254, 3582957..3583127,3583428..3583596,3584873..3585040, 3585542..3585634,3585670..3585960,3587390..3587565, 3587843..3587879,3588112..3588273,3588469..>3588519)) /locus_tag="PAL_GLEAN10009508" /product="Protein unc-45 like protein A" CDS complement(join(3577001..3577258,3577404..3577559, 3577665..3577782,3578524..3578639,3578861..3579080, 3579190..3579236,3579440..3579580,3579891..3580032, 3580272..3580366,3581183..3581483,3582083..3582254, 3582957..3583127,3583428..3583596,3584873..3585040, 3585542..3585634,3585670..3585960,3587390..3587565, 3587843..3587879,3588112..3588273,3588469..3588519)) /locus_tag="PAL_GLEAN10009508" /note="GO_function: GO:0005488 - binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Protein unc-45 like protein A" /protein_id="ELK18282.1" /db_xref="InterPro:IPR013026" /db_xref="InterPro:IPR016024" /db_xref="InterPro:IPR019734" /db_xref="UniProtKB/Swiss-Prot:Q5RAP0" /translation="MTVSDPGTPEPRPATPGASSVEQLRKDGNELFKCGDYEGALTAY TQALDLGVTPQDQAILHRNRSACYLKLEDYDKAEIEASKAIEKDGGDVKALYRRSQAL EKLGRLDQAVLDLQRCVSLEPKNKVFQEALRSIGGQIQEKMARLGMRCLAANRMPPLL KGTAFSVGATSAAQAGSHLERQIAAGSSRKLPGESIPAQGSLALALSTDILAVPPKDK SQVLGGGGENKEGMCCLWSTEVRYMSSTDAKVEQMFQILLDPQEKGTEKKQKASQNLV VLAREDAGAEKIFRNNGVQLLQRLLDTGEADLMLAALRTLVGICSEHQSRTVATLSVL GTRRVVFILGVENQAVSLAACHLLQVMFDALKEGVRKGFRGKEGAIIVDPARELKVLI SNLLELLTEVGVSGQGRDNALALLIKTVPRKSLKDPNNSLTLWVIDQGLRKILEVGGS VQEPPGALTVTANSRMSASILLSKLFDDLKCDAERENFHRLCENYIKSWFEDQGLAGK LRAIQTVSCLLQGPCDAGNRALELSGVMETVIALCASEREEEQLVAVEALIHAAGKAK RASFITANGVSLLKDLYKRSEKDSIRIRALVGLCKLGSAGGTDFSMKQFAEGSTLKLA KQCRKWLCNDQIDAGTRRWAVEGLAYLTFDADVKEEFVEDEAALKALFQLSRSEERSV LFAVASGLVNCTNSYDYEEPDPKMVELAKYAKQHVPEQHPKDKLSFVRARVKKLLAQG EEKGEGGTVRALGPDSLGLIFLGTCWTLKGLSLQALLPLALEGTDVGQTKAAQALAKL TITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQKIVK EKAVPMIEGYMFEEHEMIRRAATECMCNLAMSKEVQDLFEAEGNDRLKLLVLYSGEDD DLLRRAAAGGLAMLTSVRPSLCGRIPQVTTHWLEILQALLLSSNQELQHRGAVVVLNM VEASREIASTLMESEVLEILSVLARGKEGPVTRAAVACLGKAVEYGLIKPNQDGQ" assembly_gap 3587609..3587630 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3591147..>3592408 /locus_tag="PAL_GLEAN10009509" mRNA join(<3591147..3591258,3591557..3591612,3591720..3591960, 3592278..>3592408) /locus_tag="PAL_GLEAN10009509" /product="HD domain-containing protein 3" CDS join(3591147..3591258,3591557..3591612,3591720..3591960, 3592278..3592408) /locus_tag="PAL_GLEAN10009509" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]" /codon_start=1 /product="HD domain-containing protein 3" /protein_id="ELK18283.1" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR006674" /db_xref="UniProtKB/Swiss-Prot:Q8N4P3" /translation="MGSEAAQLLEAADFAARKHRRQRRKDPEGTPYINHPIGVARILT HEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRGLVEEVTDDKTLPKLERKR LQVEQAPHSSPGAKLVKLADKLYNLRDLKRCTPEGWSEHRVQEYFEWAAQVVKGLQGT NQQLEEALTQLFKERGLTL" assembly_gap 3593411..3593517 /estimated_length=107 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3598325..>3607746) /locus_tag="PAL_GLEAN10009510" mRNA complement(join(<3598325..3598477,3599114..3599224, 3599420..3599614,3601583..3601716,3603307..3603448, 3603670..3603803,3604085..3604199,3604501..3604623, 3604848..3605084,3605589..3605754,3605908..3605975, 3606162..3606276,3606433..3606615,3606808..3607010, 3607296..3607413,3607490..>3607746)) /locus_tag="PAL_GLEAN10009510" /product="Alpha-mannosidase 2x" CDS complement(join(3598325..3598477,3599114..3599224, 3599420..3599614,3601583..3601716,3603307..3603448, 3603670..3603803,3604085..3604199,3604501..3604623, 3604848..3605084,3605589..3605754,3605908..3605975, 3606162..3606276,3606433..3606615,3606808..3607010, 3607296..3607413,3607490..3607746)) /locus_tag="PAL_GLEAN10009510" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO_function: GO:0004559 - alpha-mannosidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0015923 - mannosidase activity [Evidence IEA]; GO_function: GO:0030246 - carbohydrate binding [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO_process: GO:0006013 - mannose metabolic process [Evidence IEA]" /codon_start=1 /product="Alpha-mannosidase 2x" /protein_id="ELK18284.1" /db_xref="InterPro:IPR000602" /db_xref="InterPro:IPR011013" /db_xref="InterPro:IPR011330" /db_xref="InterPro:IPR011682" /db_xref="InterPro:IPR015341" /db_xref="UniProtKB/Swiss-Prot:P49641" /translation="MSERVSWEGLICSARGQGIEVRSLGQGALGSQKGLSISGGVPCR PRGPPMAMLQKVSLRWICSGSCKVEPHAGPFPALRAALLLDQLVPLGDDFRYDKPQEW DAQFSNYQRLFDFLNSKPDFHVQAQFGTLSDYFDALYKRTGVEPGARPPGFPVLSGDF FSYADREDHYWTGYYTSRPFYKSLDRVLEAHLRGAEILYSLAVAHARRSGLAGQYPLS NFALLTEARRTLGLFQHHDAITGTAKEAVVADYGVRLLRSLVNLKQVIINAAHYLVLG DKETYHFDPEVPFLQMDDTRSNHDALPERTVIRLDSSPRYVVLFNPLEQERLSVVSLL VSSPQVRVLSEEGQPLAAQVSVHWSSATDMVPDVYQVSVPIRLPALGLGVLQLQLGLD GHHTLPSSVRIYLHGRQLVVSRHEAFPLRIIDSGTGDFALSNRYMQVWFSGLSGLLKS IRRVDEEQEQRMDMEFLVYGTRTSKDKSGAYLFLPDGEAQPYVPKDPPVLRVTEGPFF SEVVAYYEHIHQVVRLYNLPGVEGLSLYMSSLVDIRDYVNRELALRIHTAIDSQGTFF TDLNGFQVQPRRYLKKLPLQANFYPMPVMAYIQDAQNRLTLHTAQALGVSSLRDGQLE VILDRRLMQDDNRGLGQGLKDNKRSCNYFRLLLERRTLGSEVPDGHSTSYPSLLSHLT STYLNAPVLALPVAKRQPPAPGLRSFHPLASSPPCDFHLLNLRMLQAEDDTLPSAEAA LILHRKGFDCGLEAKNLGFNCTTSQGKVALGSLFHGLDVGFVQPTSLTLLYPLASPSN STDIYLEPMEVATFRLRLG" assembly_gap 3607415..3607485 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3609359..>3612362) /locus_tag="PAL_GLEAN10009511" mRNA complement(join(<3609359..3609591,3609992..3610165, 3610347..3610474,3610944..3611073,3611189..3611333, 3611404..3611661,3612231..>3612362)) /locus_tag="PAL_GLEAN10009511" /product="Alpha-mannosidase 2x" CDS complement(join(3609359..3609591,3609992..3610165, 3610347..3610474,3610944..3611073,3611189..3611333, 3611404..3611661,3612231..3612362)) /locus_tag="PAL_GLEAN10009511" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004559 - alpha-mannosidase activity [Evidence IEA]; GO_process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /codon_start=1 /product="Alpha-mannosidase 2x" /protein_id="ELK18285.1" /db_xref="InterPro:IPR000602" /db_xref="InterPro:IPR011330" /db_xref="UniProtKB/Swiss-Prot:P49641" /translation="MKLKKQVTVCGAAIFCVAVFSLYLMLDRVQHDPTRHQSGGNFPR SQISVLQNRIEQLEQLLEENHEIISHIKESVLELTANAEGPPALLPYYTVNGSWVVPP EPRPSFFSISPQDCQFALGGQGQKPELQMLTVSEELPFDNVDGGVWKQGFDISYGPHD WDAEDLQVFVVPHSHNDPGWIKTFDKYYAEQTQHILHSMVSKLQEDPRRRFLWAEVSF FAKWLVGNGQLEIVTGGWVMPDEANSHYFALIDQLIEGHQWLEKNLGATPRSGWAVDP FGHSPTMAYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQTWDSDSSTDIFCHM MPFYSYDVPHTCGPDPKICCQFDFKRLPGGRINCPWKVPPRAITEANVAERYLPPVLA SCLGSAA" assembly_gap 3613625..3613985 /estimated_length=361 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3617892..>3626582) /locus_tag="PAL_GLEAN10009512" mRNA complement(join(<3617892..3618034,3618466..3618588, 3618692..3618849,3619024..3619147,3619247..3619341, 3619611..3619729,3620289..3620342,3620746..3620868, 3621223..3621432,3621927..3622010,3622128..3622314, 3622425..3622547,3622657..3622788,3622862..3622999, 3624234..3624417,3624543..3624639,3626042..3626278, 3626373..>3626582)) /locus_tag="PAL_GLEAN10009512" /product="Proto-oncogene tyrosine-protein kinase Fes/Fps" CDS complement(join(3617892..3618034,3618466..3618588, 3618692..3618849,3619024..3619147,3619247..3619341, 3619611..3619729,3620289..3620342,3620746..3620868, 3621223..3621432,3621927..3622010,3622128..3622314, 3622425..3622547,3622657..3622788,3622862..3622999, 3624234..3624417,3624543..3624639,3626042..3626278, 3626373..3626582)) /locus_tag="PAL_GLEAN10009512" /note="GO_function: GO:0004672 - protein kinase activity [Evidence IEA]; GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Proto-oncogene tyrosine-protein kinase Fes/Fps" /protein_id="ELK18286.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000980" /db_xref="InterPro:IPR001060" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR020635" /db_xref="UniProtKB/Swiss-Prot:P14238" /translation="MGFSSELCSPKGHGALQQMQEAELRLLEGMRKWMAQRVKSDREY AGLLHHMSLQDSGGQSRGGPDSPIGQFPGWAWEPPSSTRRLILRVLQSWAEITSQTEG LSRLLRQHAEDLNSGPLNKLSLLIRERQQLRRTYSEQWQQLQQDLTKTHSQDIEKLKS QYRALARDSAQARRKYQEASKDKDRDRAKDKYVRSLWKLFAHHNRYVLGVRAAQLHHQ HHHQLMLPGLLQSLQDLHQEMACILKEILQEYLEISSLVQDEMVAIHREMAAAAARIQ PEAEYHGFLRQYGSTPEVPPCVTFDESLLEEGEPLEPGELQLNELTVESVQHTWVPRL TSVTDELAAATKTVFSRQEVVSQLQRELRNEEQNIHPRQRVYLLGKRQVLQEELQGLQ VALCSQAKLQAQQELLQAKLEQLGPGEPPPVPLLQDDCHSTSSSEPEREGGRTPTLEI LKSHISGIFRPKFSLPPPLQLVPEVQKPLHEQLWYHGAIPRAEVAELLTQSGDFLVRE SQGKQEYVLSVLWDGQPRHFIIQSADNLYRLEGDGFPSIPLLIDHLLRSQQPLTKKSG IVLNRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRMK TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGIYAAS GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRDFIE KGGRLPCPELCPDAVFRLMEQCWAYEPRQRPSFSTIYQELQSIRKRHR" gene complement(<3629248..>3629433) /locus_tag="PAL_GLEAN10009513" mRNA complement(<3629248..>3629433) /locus_tag="PAL_GLEAN10009513" /product="hypothetical protein" CDS complement(3629248..3629433) /locus_tag="PAL_GLEAN10009513" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18287.1" /translation="MGDRRATPHSQHPLYVEKGVKPSGQLSKVVRPQPEFLRSGEGQP FFRDSWPSCTLAPSLSL" gene complement(<3629617..>3634543) /locus_tag="PAL_GLEAN10009514" mRNA complement(join(<3629617..3630209,3630452..3630562, 3630649..3630773,3631185..3631364,3631477..3631594, 3631687..3631790,3631910..3632010,3632492..3632704, 3633130..3633380,3633827..3633915,3634212..3634288, 3634394..>3634543)) /locus_tag="PAL_GLEAN10009514" /product="Furin" CDS complement(join(3629617..3630209,3630452..3630562, 3630649..3630773,3631185..3631364,3631477..3631594, 3631687..3631790,3631910..3632010,3632492..3632704, 3633130..3633380,3633827..3633915,3634212..3634288, 3634394..3634543)) /locus_tag="PAL_GLEAN10009514" /note="GO_function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Furin" /protein_id="ELK18288.1" /db_xref="InterPro:IPR000209" /db_xref="InterPro:IPR002884" /db_xref="InterPro:IPR006212" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR009030" /db_xref="UniProtKB/Swiss-Prot:P23377" /translation="MEWVSSQSGITQRDLNVKEAWAQGYTGRGIVVSILDDGIEKNHP DLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNA RIGGLGVLHGVPLAAGPTQNPFPHPTPRPGVRMLDGEVTDAVEARSLGLNPNHIHIYS ASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGRDHDSCNCDGYT NSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGT SASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYG YGLLDAGAMVALAQNWTTVAPQRKCLIDILTEPKDIGKRLEVRKTVTACLGEPSHITR LEHAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDE DPSGEWVLEIENTSEANNYGTLTKFTLVLYGTAPEGLPTPPESSGCKTLTSSQACVVC EEGFSLHQKSCVQHCPPGFAAQVLATHYNTENDVETIRASVCTRCHTSCATCRGPAPT DCLSCPSHASLDPVEQKCSRQTQSSRESPQQQPPPPRPPPEVEAEPRLRAGLLPSHLP EVVAGLSCAFIVLVFVIVFLVLQLRSGFSFRGVKVYTMDRGLISYKGLPPEAWQECPS DSEEDEGRRERTAFIRDQSVL" gene complement(<3634782..>3635704) /locus_tag="PAL_GLEAN10009515" mRNA complement(join(<3634782..3634946,3635064..3635162, 3635528..>3635704)) /locus_tag="PAL_GLEAN10009515" /product="Furin" CDS complement(join(3634782..3634946,3635064..3635162, 3635528..3635704)) /locus_tag="PAL_GLEAN10009515" /codon_start=1 /product="Furin" /protein_id="ELK18289.1" /db_xref="InterPro:IPR009020" /db_xref="UniProtKB/Swiss-Prot:Q28193" /translation="MELRPWLLWVVAAAGPLVLLAADAHGQKVFTNTWAVHIPGGPAV ADHVARKHGFLNQGQIFGDYYHFWHRAVTKRSLSPHRLRHSRLQREPQVKWLEQQVAK RRTKRDVYQEPTDPKFPQQWYLVCCSLGSRVLLPHLPTEGPVGR" assembly_gap 3636431..3636531 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3638946..3639912 /estimated_length=967 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3670781..3670800 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3675717..>3722982) /locus_tag="PAL_GLEAN10009516" mRNA complement(join(<3675717..3675775,3678698..3678820, 3681352..3681544,3681956..3682155,3686409..3686556, 3690326..3690516,3692713..3692908,3696687..3696816, 3706678..3706826,3707033..3707131,3708066..3708179, 3709039..3709157,3711216..3711407,3713214..3713908, 3714201..3714333,3717607..3717731,3719964..3720126, 3721260..3721951,3722885..>3722982)) /locus_tag="PAL_GLEAN10009516" /product="Bloom syndrome protein" CDS complement(join(3675717..3675775,3678698..3678820, 3681352..3681544,3681956..3682155,3686409..3686556, 3690326..3690516,3692713..3692908,3696687..3696816, 3706678..3706826,3707033..3707131,3708066..3708179, 3709039..3709157,3711216..3711407,3713214..3713908, 3714201..3714333,3717607..3717731,3719964..3720126, 3721260..3721951,3722885..3722982)) /locus_tag="PAL_GLEAN10009516" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0000166 - nucleotide binding [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004386 - helicase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO_function: GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO_function: GO:0043140 - ATP-dependent 3'-5' DNA helicase activity [Evidence IEA]; GO_process: GO:0006260 - DNA replication [Evidence IEA]; GO_process: GO:0006281 - DNA repair [Evidence IEA]; GO_process: GO:0044237 - cellular metabolic process [Evidence IEA]" /codon_start=1 /product="Bloom syndrome protein" /protein_id="ELK18290.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002121" /db_xref="InterPro:IPR010997" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR012532" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="InterPro:IPR018982" /db_xref="UniProtKB/Swiss-Prot:P54132" /translation="MAAVPQNNLQEQLERHSARKLNNKLSFSKPKSSGFTFKKKISAA NDVSVTSVSVAKTPVLSDKDINVTEAFFFSEPLAHTTSQQTEIDDFQNAPARQQTKRA GSKPLLPDLVQEVLHTTQSTPIIKESRDPAFKKLEFSSSSDSFIAINNWDDMDDFDTS GNSKAFVTPLRNHFVRVSTAQKSKKSKRNFFKAHLHKANTVKVDLTSSSSESNQVYST KEQKADSKWLNSGVICIDDSPNSQELINEDSQDSHSLKTHLREEGDNSEKKKNFEETE LYSIEKSPCIELDEDDYDIDFVPPSPEEEMTSASSSSLKCFSMLKDLDTCDQKKESFG TSEDLTKPEKMPTQQSNEESSTDCDAKQINLQQQLIRVMDNICNLVDTIPDNELKSLD CGNNLLQQRNIRRKLLAEADFNPGDAGVLGVVWRCRPDALGSPMGDVASVSSPYAFPK GDFCPRGNSDEFNFPLVPSNSISTGECLVTTTPGRAGFSATRKNLTEGPSFISHVQQC FVSSDQADTPRIEKRNESSHFPRNVLTSTAMTDQNEHIASVDLEREIQASYDTDNFDI DGFDDDDEWEDIMHNLAASKSSTAVYQPIKEGRPVKSVSERVSPSKTNCLPVASTPQN KNFSESIQNYTDESAQNLPSRHLKHERFQSLSFPHTREMMKIFHKKFGLHNFRTNQLE AINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQVQKLTSLDI PATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERNLLA RFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANLRVQKDILTQLKIL RPQVRECDTMADTLQKNGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATVAFGMG IDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEVSHCLLFYTYYDVTRLKRLILMEKD GNHHTKETHFNNLYSMVHYCENITECRRIQLLAYFGEIGFNPDFCKKYPDVSCDNCCK TKDYKTRDVTDVTKNIIRFVQEHSSSQGTRNIKHVGPCGRFTMNMLVDIFLGSKSAKI QSGLFGKGSTYSRHNAERLFKKLILDKILDEDLYINANDQPIAYVMTGSKAQTVLNGH LKVDFMETENSSSIKKQKALVTKVSQREEVVKKCLGELTEVCKALGKVFGVHYFNIFN TATLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPVLQKYSEWTLPGKVWQDRDH PISLENVALK" assembly_gap 3731945..3732003 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3740701..3740727 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <3774391..>3774573 /locus_tag="PAL_GLEAN10009517" mRNA <3774391..>3774573 /locus_tag="PAL_GLEAN10009517" /product="hypothetical protein" CDS 3774391..3774573 /locus_tag="PAL_GLEAN10009517" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18291.1" /translation="MTCSLEALKQPARSNVTCTTGLRGSAQLCGEHKPQCMGQDLVWK PGAEELVPSASKSRDN" gene complement(<3774655..>3850136) /locus_tag="PAL_GLEAN10009518" mRNA complement(join(<3774655..3774863,3775317..3775419, 3776708..3776788,3776877..3777077,3779923..3780221, 3782758..3782975,3784188..3784301,3784380..3784457, 3785822..3785871,3787447..3787532,3790463..3790498, 3796344..3796444,3798789..3798851,3800238..3800288, 3832744..3832814,3843449..3843547,3850107..>3850136)) /locus_tag="PAL_GLEAN10009518" /product="CREB-regulated transcription coactivator 3" CDS complement(join(3774655..3774863,3775317..3775419, 3776708..3776788,3776877..3777077,3779923..3780221, 3782758..3782975,3784188..3784301,3784380..3784457, 3785822..3785871,3787447..3787532,3790463..3790498, 3796344..3796444,3798789..3798851,3800238..3800288, 3832744..3832814,3843449..3843547,3850107..3850136)) /locus_tag="PAL_GLEAN10009518" /codon_start=1 /product="CREB-regulated transcription coactivator 3" /protein_id="ELK18292.1" /db_xref="UniProtKB/Swiss-Prot:Q91X84" /translation="MSTGIIDVTLVQFQKLQQLRLTQYHGGSLPNVSQLRSSVSEFQI LIFRNYPSSSSFVSQSFGSNFASAFGASYSSQPLDESWPRQHSPWKEEKHPGFRLTSA LNRTNSDSALHTSALSTKPQDPYGGGGQSAWPAPYMGFCDGENNGHGEVVSFPGPLKE ENLLPVPKPLPKQLWETKEIQSLSGRPRSCDVAGGKSDLDHSVASNRFSLLSFCCLKP SSTLLSPLFSHSPVSHLIACYLCFPALPNTRHHGCAKLLAVVTFPHNGQNIGLSPFLG ALNTGGSLPDLTNLHYSAPLPASLDAADHVFGSMSVGSSMGNLPAAVTHLGIRSSSGL QSSRSNPSIQATLNKTALSSSFNSHPQTSASNASALHPSLRLFSLSNPSLPTTHLSGP SRRRQPPVSPLTLSPGPEAHQGFSRQLSSTSPLNPYPASQMVSSDGSPLSFLSAEAQA QASPPPPYPTPQELPQPLLQQPRTQESTVQQPQAASSLPQSDFQLFTAQGSSLTSFFP DMSFDQQSMRPGPAFTQQVPLVQQGLRETQDSFPLRSNLYSNCGNFPNTILTEDSSSS LFKDLSSALAGMPEVSLNMDTPFPLEEELQIEPLSLDGLNMLSDSSMGLLDPSVEETF RADRL" assembly_gap 3817047..3817093 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3851230..3851784 /estimated_length=555 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3864151..>3941575) /locus_tag="PAL_GLEAN10009519" mRNA complement(join(<3864151..3864264,3866246..3866354, 3868545..3868667,3870584..3870750,3871408..3871620, 3874053..3874140,3874528..3874663,3875142..3875244, 3876536..3876668,3877243..3877475,3878578..3878662, 3878754..3878894,3882248..3882472,3882952..3883115, 3883400..3883555,3884258..3884466,3884822..3884891, 3884984..3885055,3885151..3885234,3885944..3886114, 3886870..3887012,3887748..3887915,3888114..3888204, 3892120..3892301,3893611..3893735,3894772..3894932, 3895132..3895295,3896061..3896145,3896979..3897142, 3901018..3901102,3901794..3901972,3902512..3902625, 3903708..3903775,3909321..3909397,3912185..3912262, 3913705..3913861,3939658..3939757,3941521..>3941575)) /locus_tag="PAL_GLEAN10009519" /product="Ras GTPase-activating-like protein IQGAP1" CDS complement(join(3864151..3864264,3866246..3866354, 3868545..3868667,3870584..3870750,3871408..3871620, 3874053..3874140,3874528..3874663,3875142..3875244, 3876536..3876668,3877243..3877475,3878578..3878662, 3878754..3878894,3882248..3882472,3882952..3883115, 3883400..3883555,3884258..3884466,3884822..3884891, 3884984..3885055,3885151..3885234,3885944..3886114, 3886870..3887012,3887748..3887915,3888114..3888204, 3892120..3892301,3893611..3893735,3894772..3894932, 3895132..3895295,3896061..3896145,3896979..3897142, 3901018..3901102,3901794..3901972,3902512..3902625, 3903708..3903775,3909321..3909397,3912185..3912262, 3913705..3913861,3939658..3939757,3941521..3941575)) /locus_tag="PAL_GLEAN10009519" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005096 - GTPase activator activity [Evidence IEA]; GO_function: GO:0005099 - Ras GTPase activator activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]" /codon_start=1 /product="Ras GTPase-activating-like protein IQGAP1" /protein_id="ELK18293.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR000593" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR001715" /db_xref="InterPro:IPR001936" /db_xref="InterPro:IPR008936" /db_xref="UniProtKB/Swiss-Prot:P46940" /translation="MSATEEVDGLGVSRPHYGSVLDNERLTAEEMDERRRQNVAYEYL CHLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTR YKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLF KLGLAPQIQDLYGKVDFTEEEINNMKIELEKYGIQMPAFSKIGGILANELSVDEAALH AAVIAINEAVDRRIPADTFAALKNPNAMLVNLEEPLASTYQDILYQAKQDKMTNAKNR TENSERERDVYEELLTQAEIQGNINKVNTLSALANIDLALDQGAAPALFRVLQSPALG LRGLQQQNSDWYLKQLLSERQQKRQSGQADPLQKEELQAGVDAANSAAQQYQRRLAAV AAINAAIQKGVAEKTVLELMNPEAQLPQVYPFAADLYQKELATLQQQSPEHSLTHPEL SVAVEMLSSVALINRALESGDMNTVWKQLSSSVTGLTNIEEENCQRYLDELMKLKAQA RAENNEFITWNDIQACVDHVNLVVQEEHERILAIGLINEALDEGDAQKTLQALQIPAA KLEGVLAEVAQHYQDTLIRAKREKAQASGIEMETQDESAVLWLDEIQGAVWQSNKDTQ EAQRFALGIFAINEAVDSGDIGKTLSALRSPDVGLYGVIPECGETYQSDLAEAKKKKL AAGDNNSKWAKHWVKGGYYYYHNLETQEGGWDEPPGFVQNSMQLSREEIQSSISGVTA AYNREQLWLANEGLITKLQACCRGYLVRQEFRSRMNFLKKQIPAITCIQSQWRGYKQK KAYQDRLAYLHSHKDEVVKIQSLARMHQARKRYRDRLQYFRDHINDIIKIQAFIRANK ARDDYKTLINAEDPPMVVVRKFVHLLDQSDQDFQEELDLMKMREEVITLIRSNQQLEN DLNLMDIKIGLLVKNKITLQDVVSHSKKLTKKNKEQLSDMMMLNKQKGGLKALSKEKR EKLEAYQHLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYLLLR LFKTALQEEIKSKVDQIQEIVTGNPTVIKMVVSFNRGARGQNALRQILAPVVKEIMDD KSLNIKTDPVDIYKSWVNQMESQTGEASKLPYDVTPEQALAHEEVKTRLDNSIRNMRA VTDKFLSAIISSVDKIPYGMRFIAKVLKDSLHEKFPDAGEDELLKIIGNLLYYRYMNP AIVAPDAFDIIDLSAGGQLTTDQRRNLGSIAKMLQHAASNKMFLGDNAHLSIINEYLS QSYQKFRRFFQTACDVPELQDKFNVDEYSDLVTLTKPVIYISIGEIINTHTLLLDHQD AIAPEHNDPIHELLDDLGEVPTIESLIGESAGNLNDPNKEALAKTEVSLTLTNKFDVP GDENAEMDARTILLNTKRLIVDVIRFQPGETLTEILETPATSEQEAEHQRAMQRRAIR DAKTPDKMKKSKFVKEDSNLTLQEKKEKIQSGLKKLTELGTVNPKNKYQELINDIARD IRNQRRYRQRRKAELVKLQQTYAALNSKATFYGEQVDYYKSYIKTCLDNLASKGKVSK KPREMKGKKSKKISLKYTAARLHEKGVLLEIEDLQANQFKNVIFEISPTEEVGDFEVK AKFMGVQMETFMLHYQDLLQLQYEGVAVMKLFDRAKVNVNLLIFLLNKKFYGK" assembly_gap 3910851..3910910 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3930138..3930184 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3941320..3941504 /estimated_length=185 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3941743..3941755 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3956667..>3960428) /locus_tag="PAL_GLEAN10009521" mRNA complement(join(<3956667..3957907,3958378..3958484, 3960325..>3960428)) /locus_tag="PAL_GLEAN10009521" /product="Zinc finger protein 774" CDS complement(join(3956667..3957907,3958378..3958484, 3960325..3960428)) /locus_tag="PAL_GLEAN10009521" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 774" /protein_id="ELK18294.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q6NX45" /translation="MWLGTSGKSGLPGHCLKNPLQGYHPAPLEEWALKGITKPKVLSQ LEQKEEPWILPLQNFEARKILRESHTDFENQVEKPKPDISETAEQCGMSLERAGNDIS HTPSWGGSWERGLELEGEHGTLPAEGSQEPFSQDKDLSELLNGYVGKKPVCAECGKSF NQSSYLMRHLRTHTGERPYKCIECGKSFKQSSDLVTHRRTHTGEKPYQCSGCEKKFSD SSTLIKHQRTHTGERPYECPECGKTFGRKPHLIMHQRTHTGEKPYTCLECHKSFSRSS NFITHQRTHTGVKPYRCNDCGDSFSQSSDLIKHQRTHTGERPFKCPECGKGFRDSSHF VAHMSTHSGERPFSCPYCHKTFSQSSHLVTHQRTHTGERPFKCDTCGKGFADSSALIK HQRIHTGERPYKCGECGKSFNQSSHFMTHQRIHLGDRPYRCPECGKTFNQRSHFLTHQ RTHTGEKPFHCSKCDKSFRQKAHLLCHQNTHLV" assembly_gap 3969104..3969120 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<3972487..>3975036) /locus_tag="PAL_GLEAN10009522" mRNA complement(join(<3972487..3972561,3974866..>3975036)) /locus_tag="PAL_GLEAN10009522" /product="hypothetical protein" CDS complement(join(3972487..3972561,3974866..3975036)) /locus_tag="PAL_GLEAN10009522" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18295.1" /translation="MPPLLPALYLSKFYPSLQHLLKCHNLHKAFPDLSSPAVLIGTQA GIFHGPETVLGAQITTPPPPKKGKKKEKLFKRTKQKC" assembly_gap 3982630..3982643 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3984383..3984445 /estimated_length=63 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 3990720..3990749 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4000391..>4010797) /locus_tag="PAL_GLEAN10009523" mRNA complement(join(<4000391..4000626,4001628..4001993, 4002352..4002516,4007689..4007750,4008352..4008440, 4009815..4009903,4010208..4010275,4010769..>4010797)) /locus_tag="PAL_GLEAN10009523" /product="WD repeat-containing protein 73" CDS complement(join(4000391..4000626,4001628..4001993, 4002352..4002516,4007689..4007750,4008352..4008440, 4009815..4009903,4010208..4010275,4010769..4010797)) /locus_tag="PAL_GLEAN10009523" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="WD repeat-containing protein 73" /protein_id="ELK18296.1" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR011046" /db_xref="InterPro:IPR019781" /db_xref="UniProtKB/Swiss-Prot:Q6P4I2" /translation="MGSAGLEVTWYQDFHAFDLSGATRVLEWIGDKGIFVAGYESLKK NEILHLMLPLRLSVKENQGLFPERDFKVCHGGFSHRSVFDLKHVPNTRLLVTSGLPVA LQVWQVSEDSDIIEAVSTIAVHEKEGHLWPRVAIFPAVAPGVLHGARLSSLQVVDLES QKTMYTSGVSDSEELSSLQVLDADTFAFCCTSGRLGLVDTRQKWAPSENGSPSPGSGG ARWYAEVGGTARGPGPSIASLCSDGQLCLLDPRDLCHPVSSVQCPVSTPSPDPKLLRV TWAPGLENCLAISGFDGTVQIYDVTSWDGMKGQVEPLFTHRGHIFLDSNGIDTAPLVT THTWHPRKPRTLLSAASDASLHVWDWVDLRTSH" gene complement(<4011884..>4014746) /locus_tag="PAL_GLEAN10009524" mRNA complement(join(<4011884..4012136,4013301..4013500, 4013769..4013932,4014590..>4014746)) /locus_tag="PAL_GLEAN10009524" /product="Neuromedin-B" CDS complement(join(4011884..4012136,4013301..4013500, 4013769..4013932,4014590..4014746)) /locus_tag="PAL_GLEAN10009524" /note="GO_process: GO:0007218 - neuropeptide signaling pathway [Evidence IEA]" /codon_start=1 /product="Neuromedin-B" /protein_id="ELK18297.1" /db_xref="InterPro:IPR000874" /db_xref="UniProtKB/Swiss-Prot:P08949" /translation="MALRAGAARRLGGLLLFALLVAGAAPLSWELPEPRSRASKIRVH PRGNLWATGHFMGKKSLEPPSPPLLKAAPHISLRDXXXXXXXXXXXXXXXXGMSLSGP ASHTQLDLPLTVHTGLFPTPAIHPRCAQYMLVVRGGTLRPRKGKSHIAAETESDLIHL NQYSSQSVIFLSDLCLALRNGRVPLSVASSAQVNSSVCSASVQEAAGVNAAEVMPLMR KTRQHGLDCAHPGKVLNGTLVVAPSGCKSWARISVTPFL" assembly_gap 4013805..4013851 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4020019..>4051100) /locus_tag="PAL_GLEAN10009525" mRNA complement(join(<4020019..4020114,4021215..4021310, 4023141..4023198,4029287..4029406,4033636..4033785, 4038032..4038141,4047022..4047079,4051009..>4051100)) /locus_tag="PAL_GLEAN10009525" /product="Signal peptidase complex catalytic subunit SEC11A" CDS complement(join(4020019..4020114,4021215..4021310, 4023141..4023198,4029287..4029406,4033636..4033785, 4038032..4038141,4047022..4047079,4051009..4051100)) /locus_tag="PAL_GLEAN10009525" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_process: GO:0006465 - signal peptide processing [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Signal peptidase complex catalytic subunit SEC11A" /protein_id="ELK18298.1" /db_xref="InterPro:IPR001733" /db_xref="InterPro:IPR015927" /db_xref="InterPro:IPR019759" /db_xref="UniProtKB/Swiss-Prot:Q5R9C7" /translation="MLEAERAAVGKAQEPLVELKVHCGWGLRSESTTMLSLDFLDDVR RMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFL TNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGHIKFLTKGDNNAVDDRGLYK QGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKPSRDSPGEKSAKVGIPGLFAIP AHLSVNVLILHVQPYAIRASFWIWPQVPPSDSKLVQRRSPG" assembly_gap 4062808..4063823 /estimated_length=1016 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4067394..4067460 /estimated_length=67 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4076878..4076986 /estimated_length=109 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4085387..>4102042 /locus_tag="PAL_GLEAN10009526" mRNA join(<4085387..4087609,4092832..4093010,4098150..4098326, 4098602..4098761,4098874..4099161,4099386..4099498, 4100014..4100149,4101524..>4102042) /locus_tag="PAL_GLEAN10009526" /product="Zinc finger protein 592" CDS join(4085387..4087609,4092832..4093010,4098150..4098326, 4098602..4098761,4098874..4099161,4099386..4099498, 4100014..4100149,4101524..4102042) /locus_tag="PAL_GLEAN10009526" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein 592" /protein_id="ELK18299.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q92610" /translation="MGDMKTPDFDDLLAAFDIPDPTSLDAKEAIQTPSEENESPLKPP GTCMDESVSLSHSGSASDVPAVSVIVKNTSRQESFEAEKDHIAPSLLHNGFRASDLPP DAHNLGHNCGKFDSTFMNGDSARGFPGKLEPSKSEPLPTFNQFSPISSPEPEDTIKDN GCGPKPKHSDSYFPPPPGCGPVLEALAKFPVPDLHMFDHFCKNEPKPEPLPLGSQQDH ERGGPKALEPHKELDATRFFGEALEFNSHPSKGLTAEFGTCSSVPPRQRLKPAHSKLS SCVAALVALQAKRVASVTKEDQPGHTKDPSGPTKEGSKGSPKMPKSPKSPRSPLEATR KCMKPSDSPRSICSDGSSKGSPSVAASSPPAIPKVRIKTIKTSSGEIKRTVTRILPDP DDPNKSPVGSPLGSATAEAPSEVPEDEVTALPPVEHFPEGSTSSGSPQGDRKGAESTG KASGSSSPSCGPGSRVPKGAAPSSQVGKRPQQSAAPQASTLAPATLLPKAVHLANLNL VPHSVAASVTAKSSAQRRSQPQLTQMSVPLVHQVKKAAPLVVEVFNKVLHSSNPVPLY APNLSPPADSRIHVPASGYCCLECGDAFALEKSLSQHYGRRSVHIEVLCTLCSQTLLF FNKCSLLRHARDHKSKGLVMQCSQLLVKPISADQMFAVAPANSPAPAAPAPAALPPSP KHGPTAGSASSTIPALPLYPDPVRLIRHGIKCLECHKQIRDHTVMAAHFQRTSEETEG LTCQVCQMLLPNQCSFCAHQRIHTHKSPYCCPECGALCRSAYFQTHVKENCLHYARKV GYRCIHCGVVHLTLALLKSHIQERHCQVFHKCAFCPMAFKTASSTADHSATQHPTQPH RPSQLMYKCSCEMVFNKKRHIQQHFYQNASKAQVGVFKCPECPLLFLQKPELMQHVKS THGVPRNVDELSSLQSSADTSSSRPGSRVPTEPPATHVAARGSSLPSSRWGRSEAHRR AEAKPRLRSTGWTCQECQEWVPDRESYVSHVKKSHGRTLKRYPCRQCEQSFHTPSSLR KHIRNNHDTVKKVYTCGYCTEDCPSFPRPSLLESHISLMHGIRNPDLSQTSKVRPPGG HSPQVNHLKRRVSGAADAPGTSNGATVSSTKRHKSLFQCAKCSFATDSGLEFQSHIPQ HRVDSSTAQCLLCGLCYTSAGSLSRHLFIVHKVRDQEEEEEVAEAAVEAAEPEEGSGE EVSTETRENGLEECAGEPLAGDPEARRSPGPAPEEDGAQDAQSQPQASQDQDGHSLSP QV" assembly_gap 4088451..4088509 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4089182..4089199 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4108442..4108837 /estimated_length=396 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4114003..>4131206 /locus_tag="PAL_GLEAN10009527" mRNA join(<4114003..4114043,4117436..4117557,4127758..4127875, 4128474..4129635,4131057..>4131206) /locus_tag="PAL_GLEAN10009527" /product="Alpha-protein kinase 3" CDS join(<4114003..4114043,4117436..4117557,4127758..4127875, 4128474..4129635,4131057..4131206) /locus_tag="PAL_GLEAN10009527" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Alpha-protein kinase 3" /protein_id="ELK18300.1" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:Q96L96" /translation="SLSSSRLSHPSSGRSTFCSIIAQLTEETQPLFETTLKSRAVSED SDVRFTCIVTGYPKPEVTWYKDDMELDRYCGLPKYKITHQGNRHTLQLFRCQEDDAAI YQASAQNSKGIVSCSGVLEVGTMTEYKIHQRWFAKLKHKAAAKMREIEQSWKHGKEAA GEADTLRKLSPDRFQRKRRLSGAEVPVPSAPTREAEDSTQVAWQEVGTESSQHPGLGL MNNFSSGEVTTNGDAAPENGEAGEHGLLTYICEAMELGSQRAPKKESGAKKKKKDEEP KPGLRKPELEKAALGDHSENCGPSTDKPDSCGTQRPMDTEQVHTQPRGRATRGPTSSR VDSTRKPASAMGSQDQAQNALPAAPHGEGVSHTPSGRAPGEMPSGKMPGEATGERGPT APGQPTPSAPQPNRPFNRKRFAPPKPKVEPTANSKPDSSMSQAPGPGAQSLGKAPPED SPQVPTPPARRRHGTRDSPLQGQAGYRTPGESFRGRWSGADLKPVSGICSLPSGPHTQ SQEILASGVMSFSGLEGAAPCA" assembly_gap 4118301..4118339 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4141309..>4152506 /locus_tag="PAL_GLEAN10009528" mRNA join(<4141309..4143406,4144063..4144210,4144600..4144727, 4144860..4144895,4147219..4147499,4148117..4148205, 4148984..4149207,4151527..4151575,4152161..>4152506) /locus_tag="PAL_GLEAN10009528" /product="Alpha-protein kinase 3" CDS join(4141309..4143406,4144063..4144210,4144600..4144727, 4144860..4144895,4147219..4147499,4148117..4148205, 4148984..4149207,4151527..4151575,4152161..4152506) /locus_tag="PAL_GLEAN10009528" /note="GO_function: GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006468 - protein phosphorylation [Evidence IEA]" /codon_start=1 /product="Alpha-protein kinase 3" /protein_id="ELK18301.1" /db_xref="InterPro:IPR004166" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/Swiss-Prot:Q96L96" /translation="MAPTTSASSSADRASAGGSTPRSQGVIEPMDAETQESRTYADRK LGDEKNTEANGKMQVDGRPQGDGTQTTLRMQTDKKTQVNVVTQEGERVVSDRRSQEDV MAQGRTGTKVGGTQASERTQEDRKTLAYATTQEDRRIQEGKGTQSEGSIPTAVKGQPE KESVTRLGPQPRAPKLPPSEDPRSPQSIEYFEQTPEGSCVPEKLGFMLRSEEASVTAS GNQEETVLGPRAGSLMLPAQLPPEGSLMGRERDQSWQRSGPVKDKPEDGLFQCPKEEQ LGEVLSVDLGSCPPTGPSPEVPTLPSLPGAGLTDNSQQGLPSTLASQHMSTTFLPSGD QALMSSVPALHLGLGTPTQNHPPEAMAASNEGACTKMPIVEEKPPGLRSCDPGLIDSL KNYLLLLLKLSSTETSAGGTESQEDAVPGGPAPSAKLAPTVEVAGLSPRTSRRILERV ENDHLVQSAQTLLLSPCTSRRLTSLLDREVQAGRQALAAARVPVPSLLTVPAIVVGQE EGPELASVESGEGEAPLEGLGLLSPSQESSVEELPAEAGGQTAPGQGPLSAESRTQEP FREVPGEVLTGLPAATPEELALGARRKRFLPKVRAAGDGEATKPEERESPVVSPRGPR KGLSPGSPGTPGREKRSPTQGRKAGLLAVPQAEEEPAAGDLGSSSKASELNAELALDE GKQETPAKPKKAKDLLKAPQVIRKIRVEQFPDASGSLKLWCQFFNILSDSVLTWAKDQ RSVGEVGRSAEDEGPAALAIVQAAPVDCGVYRCTIQNEHGSASTDFCLSPEVLSGFVS REEGEVGEEIEMTPMVFAKGLADSGCWGDKLFGRLASEELRGSGRTYGLRKAFQAKVI YGLEPIFESGRTCVIKVSSLLVFGPSSETSLLGRNYDVTIQGCKIQNMSREYCKIFAA EARAAPGFGEVPEIIPLYLIYRPANNIPYATLEEDLGKPLETYCSREWGYAGAPASSS SSEAMQKCQTFQHWLYLWTNGSFLVTDLAGVDWKVTDVQIATKLRGYQGLKESCFPAL LDQFASSHQCNTFCEMLGLKPLKGPEAAHPQAKAKGSKSPSAGRKGPQLSPQPQKKGI PSPQGTRKNAPSFKATPQASGAVATQLLGQPLIHEEGSKAQGTR" assembly_gap 4164666..4165035 /estimated_length=370 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4166786..>4192316 /locus_tag="PAL_GLEAN10009529" mRNA join(<4166786..4166881,4170666..4170757,4172504..4172645, 4173318..4173431,4173745..4173822,4179228..4179308, 4180511..4180591,4181592..4181717,4186234..4186364, 4187349..4187517,4187644..4187841,4190793..4190874, 4191633..4191731,4191865..4191976,4192244..>4192316) /locus_tag="PAL_GLEAN10009529" /product="Sodium/nucleoside cotransporter 1" CDS join(4166786..4166881,4170666..4170757,4172504..4172645, 4173318..4173431,4173745..4173822,4179228..4179308, 4180511..4180591,4181592..4181717,4186234..4186364, 4187349..4187517,4187644..4187841,4190793..4190874, 4191633..4191731,4191865..4191976,4192244..4192316) /locus_tag="PAL_GLEAN10009529" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0001882 - nucleoside binding [Evidence IEA]; GO_function: GO:0005415 - nucleoside:sodium symporter activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Sodium/nucleoside cotransporter 1" /protein_id="ELK18302.1" /db_xref="InterPro:IPR002668" /db_xref="InterPro:IPR011642" /db_xref="InterPro:IPR011657" /db_xref="UniProtKB/Swiss-Prot:O00337" /translation="MEDDAPRPKESISFASMAYGLENTGAELLDSLRALALFVLTCAV LAFLAHSLLKRLRGPKLLRGLALAAFLGLVLWLVLDTSRRPEQLVSFAGTCVFISILF ACSKHRHAVSWRVVSWGLGLQFVLGLLVIRTEPGFIAFQWLGDQIQIFLSYTEAGSSF VFGDTLVKDVFAFQVLPIIVFFSCVLSVLYYVGLMQWVILKIAWLMQVTMGTTATETL SVAGNIFVSQTEAPLLIQPYLADMTLSEIHVVMTGGYATIAGSLLGAYISFGIDAASL IAASVMAAPCALALSKLVYPEVEESKFRSVEGVKLSCGDAQNLLEATSSGAAVSVRII ANIAANLIAFLAVLAFINAALSWLGAMVDVQGLSFQVICSYALRPLAFLMGVAWEDCP VVAELLGIKLFLNEFVAYQELSQYKQRRLAGVEEWIGAKKQWISVRAEVLTTYALCGF ANFSSIGIMLGGLTSMAPQRRSDFSQIVLRALCTGACVSLVNACVAGILYVPGGTQVN CTMLLNTTLSASSFEVYRCCREAFQSTSPEFSPQALDNCCRLYNHTICA" assembly_gap 4183935..4183989 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4210719..4214105 /estimated_length=3387 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4216085..4216922 /estimated_length=838 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4222156..4222178 /estimated_length=23 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4234201..4234247 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4250598..4250644 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4251764..4251774 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4266980..4267030 /estimated_length=51 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4278217..>4321419 /locus_tag="PAL_GLEAN10009530" mRNA join(<4278217..4278273,4279812..4280002,4282581..4282637, 4283663..4283717,4286418..4286506,4290688..4290766, 4292288..4292425,4297521..4297603,4299186..4299237, 4299338..4299380,4305979..4306056,4310240..4310310, 4310576..4310740,4312034..4312082,4312286..4312421, 4313975..4314173,4315115..4315332,4316798..4316930, 4318775..4318942,4320460..4320589,4321304..>4321419) /locus_tag="PAL_GLEAN10009530" /product="High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A" CDS join(<4278217..4278273,4279812..4280002,4282581..4282637, 4283663..4283717,4286418..4286506,4290688..4290766, 4292288..4292425,4297521..4297603,4299186..4299237, 4299338..4299380,4305979..4306056,4310240..4310310, 4310576..4310740,4312034..4312082,4312286..4312421, 4313975..4314173,4315115..4315332,4316798..4316930, 4318775..4318942,4320460..4320589,4321304..4321419) /locus_tag="PAL_GLEAN10009530" /note="GO_function: GO:0000156 - two-component response regulator activity [Evidence IEA]; GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]; GO_process: GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]" /codon_start=1 /product="High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A" /protein_id="ELK18303.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR002073" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR013767" /db_xref="InterPro:IPR023088" /db_xref="UniProtKB/Swiss-Prot:O60658" /translation="VAVADVQFGPMKFHPDQLQVLLVFTKEDNQCNGFCRACEKAGFK CTVTKEAQAVLACFLAKHHDIIIIDHRNPRQLDAEALCRSIRSSKFSENTVIIGVVRR PDREESSVMPLIAAGFTRRYVENPSLMACYNELLQLEFGEVRSQLKLRTCNSIFAALE KSQEAVEITSEDHVIQYANPAFETTMGYESGELIGKKLAEVPINEKKADLLDTINSYI RMGKEWQGICYAKNGDNVQQNVKIIPVIGQGGRIRHYVSIIRVCSGNNKAEKIAECVQ SDRLTDNQSGKHKDKRKSSLDVKAVGHRASEVASQRRHSSMARIHSMTIEAPITKVIN IINAAQENSPMPVTEALDRVLEILRTTELYSPQFGAKDDDPHASDLVGGLMSDGLRRL SGNEYALSTKNFQQIASNIVTPISLHDIPPRIAQAIENEHYWDFDIFELEAATQKRPL IYLGLKIFARFGICELLNCSEATLRTWFQLIEANYHSSNPYHNSTHSADVLHATAYFL CRERIKQTLDPVDEAAALIAATIHDVDHPGRTNSFLCNAGSELAILYNDTAVLESHHA ALAFQLTIRDDKCNIFKNMERNDYRTLRQAIIDMVLATEMTKHFEHVNKFVNSVNKPL AALEVKEETDEEQAAINTVLRTPENRTLIKRMLIKCADVSNPCRPLEQSIEWAARISE EYFSQTDEEKRQDLPVVMPVFDRNTCSIPKSQISFIDYFITGMFDAWDAFVDLPELLQ HLDNNFKYWKGLDERKLRSLRPPMESQW" assembly_gap 4278529..4278630 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4280804..4280868 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4324018..4324381 /estimated_length=364 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4327897..4327925 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4340077..>4369011) /locus_tag="PAL_GLEAN10009532" mRNA complement(join(<4340077..4340157,4341263..4341328, 4341945..4342050,4342569..4342720,4347697..4347777, 4348324..4348418,4349721..4349919,4350080..4350160, 4351402..4351538,4352421..4352510,4352825..4352938, 4354948..4355203,4357061..4357287,4368858..>4369011)) /locus_tag="PAL_GLEAN10009532" /product="Cytoplasmic polyadenylation element-binding protein 1" CDS complement(join(4340077..4340157,4341263..4341328, 4341945..4342050,4342569..4342720,4347697..4347777, 4348324..4348418,4349721..4349919,4350080..4350160, 4351402..4351538,4352421..4352510,4352825..4352938, 4354948..4355203,4357061..4357287,4368858..4369011)) /locus_tag="PAL_GLEAN10009532" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_component: GO:0005840 - ribosome [Evidence IEA]; GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO_process: GO:0006412 - translation [Evidence IEA]" /codon_start=1 /product="Cytoplasmic polyadenylation element-binding protein 1" /protein_id="ELK18304.1" /db_xref="InterPro:IPR000504" /db_xref="InterPro:IPR001210" /db_xref="UniProtKB/Swiss-Prot:Q5R733" /translation="MLFPTSAQDSPRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDAS AQSSTHSVLSMLHNPLGSVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGPRLDTRPILD SRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLTGGGPRDSLKMGVGSRMDQ EQVALAAAVTPSLTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEAT CTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPR CPPKGYVYLVFELEKSVRALLQACSHDPLSPDGLSEYYFKMSSRRLRCKEDERLLFSH LFSPFGHVDTVKVSSSWVGVQVIPWVLADSNFVWSPFQRFDPSRTVFVGALHGMLNAE ALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTK KVQIDPYLEDSLCHICSSQPGPFFCRDQGRVRTKTVKKAARVIIEKYYTRLGNDFHTN KRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVS ALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV" gene complement(<4385749..>4395993) /locus_tag="PAL_GLEAN10009533" mRNA complement(join(<4385749..4385942,4387332..4387506, 4395910..>4395993)) /locus_tag="PAL_GLEAN10009533" /product="Cytoplasmic polyadenylation element-binding protein 1" CDS complement(join(4385749..4385942,4387332..4387506, 4395910..4395993)) /locus_tag="PAL_GLEAN10009533" /codon_start=1 /product="Cytoplasmic polyadenylation element-binding protein 1" /protein_id="ELK18305.1" /db_xref="UniProtKB/Swiss-Prot:Q9BZB8" /translation="MVEPTLGSGSGAVLWFSFSAVHTPVQCLEEGAGRIKDCWDSQEP PALSKCSNASIFRRINAILDNSLDFSGVCSTPVNRGIHDHLPGIPVVSLVRCQALEMV LLLYPAYASGWSDDKVRVDFVVFSDASQSKGGEVPEVKAYISDYSDIV" assembly_gap 4397837..4398571 /estimated_length=735 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4407456..>4434284) /locus_tag="PAL_GLEAN10009534" mRNA complement(join(<4407456..4407606,4407708..4407846, 4410398..4410495,4410741..4410825,4411197..4411425, 4411614..4411720,4412042..4412102,4412246..4412429, 4412740..4412863,4413243..4413351,4413803..4413921, 4415046..4415232,4419300..4419476,4420001..4420110, 4420406..4420538,4420859..4420921,4422403..4422474, 4422799..4422853,4423136..4423419,4423512..4423694, 4423794..4423860,4424118..4424278,4426064..4426159, 4426471..4426545,4426697..4426772,4434172..>4434284)) /locus_tag="PAL_GLEAN10009534" /product="AP-3 complex subunit beta-2" CDS complement(join(4407456..4407606,4407708..4407846, 4410398..4410495,4410741..4410825,4411197..4411425, 4411614..4411720,4412042..4412102,4412246..4412429, 4412740..4412863,4413243..4413351,4413803..4413921, 4415046..4415232,4419300..4419476,4420001..4420110, 4420406..4420538,4420859..4420921,4422403..4422474, 4422799..4422853,4423136..4423419,4423512..4423694, 4423794..4423860,4424118..4424278,4426064..4426159, 4426471..4426545,4426697..4426772,4434172..4434284)) /locus_tag="PAL_GLEAN10009534" /note="GO_component: GO:0030117 - membrane coat [Evidence IEA]; GO_function: GO:0005488 - binding [Evidence IEA]; GO_process: GO:0006886 - intracellular protein transport [Evidence IEA]; GO_process: GO:0016192 - vesicle-mediated transport [Evidence IEA]" /codon_start=1 /product="AP-3 complex subunit beta-2" /protein_id="ELK18306.1" /db_xref="InterPro:IPR002553" /db_xref="InterPro:IPR013041" /db_xref="InterPro:IPR016024" /db_xref="UniProtKB/Swiss-Prot:Q13367" /translation="MSAAPAYSEDKGGSAGPGEPEYGHDPASGGIFSSDYKRHDDLKE MLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAE EQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPY VRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIH KNYRKLCNLLIDVEEWGQVVIISMLTRYARTQFLSPTQNESLLEENPEKAFYGSEEDE AKAPGSEEAAAATLPTRKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPK AEVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKV LKLEVLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNG LVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLI GEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLTQYVLSL AKYDQNYDIRDRARFTRQLIVPSEQGGVLSRHAKKLFLAPKPAPVLESSFKDRDHFQL GSLSHLLNAKATGYQELPDWPEEAPDPSVRNVEVPEWTKCSNREKRKEKEKPFYSDSE GESGPTESADSDPGSESESDSKSSSESGSGESSSASDNEDQDEDEEKGRSSESEQSEE DGAKRKMKKRKKVAEGRGEDSSSDEGSDSSSSSSESEMSSESEEEPAEPASWRKKTPP GGKSAPAAKEISLLDLEDFTPPSVQPVSPPTAVSTSLAADLEGLTLTDSPLVPSLLSP VSGVGRQELLHRVAGEGLAVDYAFSRQPFSGDPHMVSVHVHFSNSSDTPIKSLHVGTP RLPAGISIQAFPEIESLAPGESATAVMGINFCDSTQAANFQLCTQTRQFYVSIQPPVG ELMAPVFMSENEFKKEQGKLTGMNEITEKLTLLDACRSDHVVVQKVTTTANLGRVPCG TSDEYRFAGRTLTSGSLVLLTLDARPAGPAQLTVNSEKMVIGTMLVKDVVQALTQ" assembly_gap 4416144..4416185 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4432084..4432116 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4443382..4443483 /estimated_length=102 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4448063..>4464041) /locus_tag="PAL_GLEAN10009535" mRNA complement(join(<4448063..4448315,4450294..4450470, 4451935..4452067,4454097..4454230,4454940..4455090, 4455824..4455958,4457693..4457848,4458886..4459007, 4460090..4460112,4461302..4461532,4463163..4463258, 4463397..>4464041)) /locus_tag="PAL_GLEAN10009535" /product="Fibronectin type III and SPRY domain-containing protein 2" CDS complement(join(4448063..4448315,4450294..4450470, 4451935..4452067,4454097..4454230,4454940..4455090, 4455824..4455958,4457693..4457848,4458886..4459007, 4460090..4460112,4461302..4461532,4463163..4463258, 4463397..4464041)) /locus_tag="PAL_GLEAN10009535" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Fibronectin type III and SPRY domain-containing protein 2" /protein_id="ELK18307.1" /db_xref="InterPro:IPR001870" /db_xref="InterPro:IPR003877" /db_xref="InterPro:IPR003879" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR008957" /db_xref="InterPro:IPR008985" /db_xref="InterPro:IPR018355" /db_xref="UniProtKB/Swiss-Prot:A1L4K1" /translation="MEEGAEEAPELDRPTAPRDFHLYHVDPYDSEDRLQIFPEESSRM RREVVQAEMTGEPRGLAKGKPRRDLEEEVDELVHLYGLEDDHELGDEFVDENMPRIEV SEYPPYMMTEGEPASEQRGWRLSGEAAEAEDLSFRVWGSAGECQDLREAYRYTHGRAS EEYECYVIPEEEDEEEAADVFCVTCKTPIRALEKVLDEHREHEVTPLNKALESAKDEI HKNMYKLEKQIIEMENFASHLEEVFITVEENFGRQEQNFESHYNEILETLAQKYEEKI QALGEKKKEKLEALYGQLVSCGENLDTCKELMETIEEMCHQEKVDFIKDAVAMADRLR KFLETKTDVEISTQPALEDQTLDFSDVEQLLGAINTIPPPSAPVINPQAPNSATGSSV RVCWSLYSDDTVESYQLSCRPVRDSSPGKDQAEFTMTVKETYCLVTNLVPNTQYEFWV TAQNRAGLSPASECAVYMTAPSPPIIKNKEIRSCEEAALICWESGNLNPVDSYTLELT QEDTPEASGVTESVVGIPTCEALVQLQPRRSYTIYVRALGMGGASARSEPATVHTTGS YFRLNQRTCHPWLTISEDGLTAVRSERKTPGREPPPSNTCFSRCVAVMGNLIPVRGRH YWEVEVDEHLDYTVGVAFEDVPRQEDLGANGLSWCMRHTWALSRHNYEFLHNKMTPDI RITVSPRKIGILLDYENSKLSFFNVDISQHLYTFSCQLPQSVHPCFSLEKPGCLKIHN GVAVPKHITFY" assembly_gap 4470274..4470309 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4473503..>4490114 /locus_tag="PAL_GLEAN10009537" mRNA join(<4473503..4473628,4476288..4476461,4478333..4478483, 4479488..4479657,4480257..4480422,4482802..4482989, 4483949..4484035,4484280..4484375,4487199..4487751, 4489813..>4490114) /locus_tag="PAL_GLEAN10009537" /product="WASP like protein-associated protein with actin, membranes and microtubules" CDS join(4473503..4473628,4476288..4476461,4478333..4478483, 4479488..4479657,4480257..4480422,4482802..4482989, 4483949..4484035,4484280..4484375,4487199..4487751, 4489813..4490114) /locus_tag="PAL_GLEAN10009537" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="WASP like protein-associated protein with actin, membranes and microtubules" /protein_id="ELK18308.1" /db_xref="InterPro:IPR003124" /db_xref="UniProtKB/Swiss-Prot:Q8TF30" /translation="MEDEQPDSLEGWVPVREDLFAEPERHQLRFLVAWNDAEGKFAIL QGHEKANTMVALMEVYQEEDEAYQELVTVATMFFQYLLQPFRDMREVATSCKLDILKS LDEDDLGPKRIVALQKEAQEWTRRAEEAIVSIQDITVNYFKETVKALAGMQKQMEQDE KRFGQAAWATAAPRLERLKLMLAREALQLMRAKELCLNHKRAEIRGKMEDLPEQEKNI DVVDELEIQYYEVQLELYEVKFEILKYEEILLITQLDSIKRLIKDKQDEVVYYDPCEN LEELKVIDRVTGLQDDRSSEVQALSRQRQQLESRRGWICARRACLRNRKDQCKENHRL RLQQAAESIKYFHQHHSIQMKRDKIKEEEQKKKKWINQERQKTLQRLREFKERCPGRS VVKTSCPEPEAPTPPGGLAQQASSPPSGTKAVTSSSSGETRRAPLPEVGDAKTAELQD CPGNTPVPIFVPAGDQTHYKSSEELSLRPQSPPSPPSSPPPPPPPPPPPPPPPPSQPP PPPPPPPPPPAPALPARSFSSQSANHWNFHGRTSVKDDEPLPLVCESPAEGPSDSSDS FEGPGSMDDVLASLRRDRIPLRKVDVPAWSPPHASVNEHILAAIRRGVKLRKVHPDLG LSPRSKPASNLERSIQAALQRIKRVSADSEEDEEDGEGQGLSEWDH" assembly_gap 4473657..4474117 /estimated_length=461 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4479453..4479485 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4502168..>4597731) /locus_tag="PAL_GLEAN10009538" mRNA complement(join(<4502168..4502356,4503535..4503615, 4504214..4504324,4505674..4505686,4506440..4506541, 4509006..4509112,4512641..4512733,4521226..4521357, 4529125..4529281,4597352..>4597731)) /locus_tag="PAL_GLEAN10009538" /product="Homer protein like protein 2" CDS complement(join(4502168..4502356,4503535..4503615, 4504214..4504324,4505674..4505686,4506440..4506541, 4509006..4509112,4512641..4512733,4521226..4521357, 4529125..4529281,4597352..4597731)) /locus_tag="PAL_GLEAN10009538" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Homer protein like protein 2" /protein_id="ELK18309.1" /db_xref="InterPro:IPR000697" /db_xref="UniProtKB/Swiss-Prot:Q9NSB8" /translation="MRFRGPGGEAVGQRKIRTGGHCASEPVYQGQIPSVSKHFGSPEA KETRGREGQAAPVSRKHRDLEPQTEDSAWPARLPPLRRPNGQLTYQALSLLSSGRAPA ARHAGNLPGARDAVSPAPKHRTSPREQPVFTTRAHVFQIDPSTKKNWVPASKQAVTVS YFYDVTRNSYRIISVDGAKVIINSTITPNMTFTKTSQKFGQWADSRANTVFGLGFSSE QQLTKFAEKFQEVKEAAKLARDKSQEKIETSSNHSQASSVNGTDDEKASHAGPADAHL KSENSKLKIALTQSAANVKKWEIELQTLRESNARLTTALQESAASVEHQAHSIDELEE QCSEINREKEKNTQLKRRIEELESELREKETELKDLRKQSEIIPQLMSECEYVSEKLE AAERDNQNLEDKVRSLKTDIEESKYRQRHLKVELKNFLEVLDGKIEDLHDFRRGLSKL GADN" assembly_gap 4506184..4506405 /estimated_length=222 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4508162..4508200 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4510825..4511235 /estimated_length=411 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4545604..4545633 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4565784..4566222 /estimated_length=439 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4571976..4572487 /estimated_length=512 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4600591..>4601684 /locus_tag="PAL_GLEAN10009539" mRNA join(<4600591..4600732,4601476..>4601684) /locus_tag="PAL_GLEAN10009539" /product="Protein FAM103A1" CDS join(4600591..4600732,4601476..4601684) /locus_tag="PAL_GLEAN10009539" /codon_start=1 /product="Protein FAM103A1" /protein_id="ELK18310.1" /db_xref="UniProtKB/Swiss-Prot:Q5R9Q6" /translation="MTDTSEAVPNFEEMFASRFTEDDKEYQEYLKRPPESPPIVEEWN SRAGCKITDSLEVEIADGDGQVTIDPINGMDDLGVIITHSTDKNLTTTNSMDTMVTTN GLPMVITDKNVSSF" gene complement(<4613611..>4617691) /locus_tag="PAL_GLEAN10009540" mRNA complement(join(<4613611..4613706,4615077..4615204, 4616535..4616661,4617578..>4617691)) /locus_tag="PAL_GLEAN10009540" /product="hypothetical protein" CDS complement(join(4613611..4613706,4615077..4615204, 4616535..4616661,4617578..4617691)) /locus_tag="PAL_GLEAN10009540" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18311.1" /db_xref="InterPro:IPR003746" /db_xref="UniProtKB/Swiss-Prot:Q3ZBP8" /translation="MLGLGCRLRPLGARRGARASARLSAGTEMPKKAGATTKGKSQSK EPERPLPPLGPVAVDPKGCVTIAIHAKPGSKQNAITDVTAEAVSVAIAAPPSEGEANA ELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTTPEEILEKLEKQVEKK" assembly_gap 4621273..4621309 /estimated_length=37 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4622218..>4645940) /locus_tag="PAL_GLEAN10009541" mRNA complement(join(<4622218..4622376,4622834..4622980, 4625476..4625563,4629930..4630122,4632301..4632498, 4636158..4636263,4639500..4639656,4645858..>4645940)) /locus_tag="PAL_GLEAN10009541" /product="BTB/POZ domain-containing protein 1" CDS complement(join(4622218..4622376,4622834..4622980, 4625476..4625563,4629930..4630122,4632301..4632498, 4636158..4636263,4639500..4639656,4645858..4645940)) /locus_tag="PAL_GLEAN10009541" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="BTB/POZ domain-containing protein 1" /protein_id="ELK18312.1" /db_xref="InterPro:IPR000210" /db_xref="InterPro:IPR011333" /db_xref="InterPro:IPR011705" /db_xref="InterPro:IPR012983" /db_xref="InterPro:IPR013069" /db_xref="UniProtKB/Swiss-Prot:Q9H0C5" /translation="MFNGGMATTSAEIELPDVEPAAFLALLRFLYSDEVQIGPETVMT TLYTAKKYAVPALEAHCVDFLTKHLRADNAFMLLTQARLFDEPQLASLCLDTIDKSTM DAISAEGFTDIDIDTLCAVLERDTLSIRESRLFGAVVRWAEAECQRQQLPVTFGNKQK VLGKALSLIRFPLMTIEEFAAGPAQSGILSDREVVNLFLHFTVNPKPRVEYIDRPRCC LRGKECCINRFQQVESRWGYSGTSDRIRFTVNRRISIVGFGLYGSIHGPTDYQVNIQI IEYEKKQTLGQNDTGFSCDGTANTFRVMFKEPIEILPSVCYTACATLKGPDSHYGTKG LKKVVHETPTASKTAFFFFSSPGNNNGTSIEDGQIPEIIFYT" assembly_gap 4641498..4641535 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4646049..4646683 /estimated_length=635 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4653005..4653042 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4658097..4658339 /estimated_length=243 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4663463..4663506 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4664734..>4680603 /locus_tag="PAL_GLEAN10009543" mRNA join(<4664734..4664851,4664916..4665013,4666351..4666454, 4668774..4668856,4669473..4669594,4671318..4671422, 4673160..4673252,4673439..4673558,4680412..>4680603) /locus_tag="PAL_GLEAN10009543" /product="Transmembrane 6 superfamily member 1" CDS join(4664734..4664851,4664916..4665013,4666351..4666454, 4668774..4668856,4669473..4669594,4671318..4671422, 4673160..4673252,4673439..4673558,4680412..4680603) /locus_tag="PAL_GLEAN10009543" /codon_start=1 /product="Transmembrane 6 superfamily member 1" /protein_id="ELK18313.1" /db_xref="UniProtKB/Swiss-Prot:Q9BZW5" /translation="MSDPGHRQRSCSVQRYTPLGHVHSVQSSSGKHEKQSIITVYAVF GFTSVVNLIIGLEQDGVIDGFMTYYLREGEPHLNTAHGHVICYWDGSVHYLMYLVMVA AIAWEESYRTIGLYWLGSITMSVIVFVPGNIVGKYGTRICPAFFLSIPYTCLPVWAGF RIYNQPSENYNYPSKVIQEVQAKDLLRRPFDLMLAICLLLATGFSLFRGLIALDCPAE LCRFYAQFQEPYLKDPAAYPKIQMLAYLFYSVPYFVVALYGLVVPGCSWMADITLIHA GGLAQAQFSHIGASLHARTAYVYRVPEDAKILFLALNIAYGVLPQLLAYRCIYKPEFF IKTKVDEKVE" assembly_gap 4664860..4664877 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4684110..>4722982) /locus_tag="PAL_GLEAN10009544" mRNA complement(join(<4684110..4684163,4691941..4692087, 4695575..4695733,4696082..4696220,4697834..4697910, 4722752..>4722982)) /locus_tag="PAL_GLEAN10009544" /product="Hepatoma-derived growth factor-related protein 3" CDS complement(join(4684110..4684163,4691941..4692087, 4695575..4695733,4696082..4696220,4697834..4697910, 4722752..4722982)) /locus_tag="PAL_GLEAN10009544" /codon_start=1 /product="Hepatoma-derived growth factor-related protein 3" /protein_id="ELK18314.1" /db_xref="InterPro:IPR000313" /db_xref="UniProtKB/Swiss-Prot:Q9Y3E1" /translation="MCALCLKLSRRSQCNEEEGRGISEAALVSLRNRIRRGRYGHKYE RERQNVVLSSGDDSKTRKEEKRYTRSQKEVTSRIDELPEGAVKPPANKYPIFFFGTHE TAFLGPKDLFPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGYQAIQQQSSSETE GEGGNTADASSEEEGDRVEEDGKGKRKNEKAGSKRKKSYTSKKSSKQSRKSPGDEDDK DCKEEENKSSSEGGDAGNDTRNTTSDLQKTSEGIGLILVVTVAKKYISAT" assembly_gap 4686532..4686542 /estimated_length=11 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4723235..4724440 /estimated_length=1206 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<4739759..>4748708) /locus_tag="PAL_GLEAN10009546" mRNA complement(join(<4739759..4740443,4744678..4746530, 4748499..>4748708)) /locus_tag="PAL_GLEAN10009546" /product="Zinc finger protein basonuclin-1" CDS complement(join(4739759..4740443,4744678..4746530, 4748499..4748708)) /locus_tag="PAL_GLEAN10009546" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="Zinc finger protein basonuclin-1" /protein_id="ELK18315.1" /db_xref="InterPro:IPR007087" /db_xref="InterPro:IPR015880" /db_xref="UniProtKB/Swiss-Prot:Q01954" /translation="MCPASQVEIVQSNVVFDISSLMLYGTQAIPVRLKILLDRLFSVL KQDEVLQILHALDWTLQDYIRGYVLQDASGKVLDHWSIMTSEEEVATLQQFLRFGETK SIVELMAIQEKEEQSLIIPPPAANVDIRAFIELFNASQPTAVDRGNPSSVHPFENLIN NMTFMLPFQFFNPVPPALIGSLPEQYVLEQGQDQSQDPKQEIHGPFPDGSFLTSNSAP FQVEKERCLNCPDAAANKEDNAHLSDSGSYSIVTRLERTQLSPEAKVKSERNSLGAKK GRVFCTACEKTFYDKGTLKIHYNAVHLKIKHKCTIEGCNMVFSSLRSRNRHSANPNPR LHMPMNRNNRDKDLRNSLSLATSDSYRRPRFTVSSPDCRPLPDYAVPGEDSRGQAAFP GVGQNGVLFPNLKTVQPVLPFYRSPATPAELANTPGVLPSLPQLSSSIPEHLVSHEMP FDALPKKKSRKSSMPIKIEKEAVEIANGSRHTLSSDDDMALQVVSEDEPEDSRADRAP EERHTQPARPGKPVPEGERACHHLQSVIEPSGAISRTPEQATHSSERETEQKPALATV PREAEDGGQERHLTPGVEPCVPLPDYVRLQQHLLAGGLFSALSNRGMAFPCFEDSQEL EHTGQLAPARQKEESRHQCDICKKTFKNACGVKMHHKNIHAKQTHVCTVEGCKATFPS RRSRDRHSSNINLHQKVLTQEALDSSEDHFHAAYLLKDVAKEAYQDVAFTQQASHTSV IFKGASRMGSLVYPITQVHGAGRESYNPGPPSEGTILDLSTTSSIKSEISSHSSWDSD RASEEGTMLMEDSDGNCEGPSLVPGEDEYPICVLMEKADQSLASLPSGLPITCHLCQK TYSNKGTFRAHYKTVHLRQLHKCKVPGCNTMFSSVRSRNRHSQNPNLHRSLASSPSHL Q" assembly_gap 4761227..4762322 /estimated_length=1096 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4767434..4767534 /estimated_length=101 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4787144..4787159 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4794676..4794770 /estimated_length=95 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4798084..4798159 /estimated_length=76 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4800826..4803590 /estimated_length=2765 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4851939..4852011 /estimated_length=73 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4855246..4856011 /estimated_length=766 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4874730..4874751 /estimated_length=22 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4874977..>4898109 /locus_tag="PAL_GLEAN10009550" mRNA join(<4874977..4875100,4878714..4878847,4880924..4881082, 4882221..4882324,4882829..4882938,4897904..>4898109) /locus_tag="PAL_GLEAN10009550" /product="Endophilin-A3" CDS join(4874977..4875100,4878714..4878847,4880924..4881082, 4882221..4882324,4882829..4882938,4897904..4898109) /locus_tag="PAL_GLEAN10009550" /note="GO_component: GO:0005737 - cytoplasm [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Endophilin-A3" /protein_id="ELK18316.1" /db_xref="InterPro:IPR001452" /db_xref="InterPro:IPR004148" /db_xref="UniProtKB/Swiss-Prot:Q99963" /translation="MLNTVSKIRGQVTSTGYPQTEGLLGGCMLKYGKELGDGSTFGNA LIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYK KKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQS TEILQELQKKLQTRISAASTLPRREYKPRPLKRSPSELNGVSATSVAKSTGPEVPQDQ PCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGTLRGESGFFPINYVDVIVPL PR" assembly_gap 4904940..4905887 /estimated_length=948 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4921473..4921527 /estimated_length=55 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4922909..4923915 /estimated_length=1007 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 4925007..4925346 /estimated_length=340 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <4933186..>4939940 /locus_tag="PAL_GLEAN10009551" mRNA join(<4933186..4933308,4939845..>4939940) /locus_tag="PAL_GLEAN10009551" /product="ADAMTS-like protein 3" CDS join(<4933186..4933308,4939845..4939940) /locus_tag="PAL_GLEAN10009551" /codon_start=1 /product="ADAMTS-like protein 3" /protein_id="ELK18317.1" /db_xref="UniProtKB/Swiss-Prot:P82987" /translation="QTSAEKATGAYFLPEFALSPQGSFLEDTTGEQFLTYRYDDQAPS KHTSVPHAMAARCPDGLWHTRTLNFMSV" gene <4953158..>5000933 /locus_tag="PAL_GLEAN10009554" mRNA join(<4953158..4953209,4967797..4967989,4972293..4972338, 4978428..4978664,4985846..4985909,5000695..>5000933) /locus_tag="PAL_GLEAN10009554" /product="ADAMTS-like protein 3" CDS join(4953158..4953209,4967797..4967989,4972293..4972338, 4978428..4978664,4985846..4985909,5000695..5000933) /locus_tag="PAL_GLEAN10009554" /codon_start=1 /product="ADAMTS-like protein 3" /protein_id="ELK18318.1" /db_xref="UniProtKB/Swiss-Prot:P82987" /translation="MAVDQEAMKVNTVVSEERSEAFVPGAQVTGEEAEWAGDVEAAGF VAQGKEADSRTCEFQILVKFPESIFGNDIDCQFFLFGRHCEGQNIRYRTCSNHDCSPD AEDFRAQQCSAYNDVQYQGRYYEWLPRHNDPTAPCALKCQARGQNVVVELAPKVLDGT RCNTDSLDMCISGICQHITESHGLLTLQLAWCQTRFTDPRHRRSRAMRESRDRRDTEK QSTEGNLTAALAFGVEEGCRTGRSFLPDSDTHPPPADTHTPLRERHVGRNLASRDPEG " assembly_gap 4997769..4997796 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5001470..5001639 /estimated_length=170 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5005767..>5013358 /locus_tag="PAL_GLEAN10009555" mRNA join(<5005767..5005834,5009377..5009483,5013216..>5013358) /locus_tag="PAL_GLEAN10009555" /product="ADAMTS-like protein 3" CDS join(5005767..5005834,5009377..5009483,5013216..5013358) /locus_tag="PAL_GLEAN10009555" /codon_start=1 /product="ADAMTS-like protein 3" /protein_id="ELK18319.1" /db_xref="InterPro:IPR000884" /db_xref="UniProtKB/Swiss-Prot:P82987" /translation="MREQSLVFTLTALDSHGRGVLAEYTAAKDSTVQFFFYQPISHQW RQTDFFPCTVTCGGGYQLNSAECVDIRLKRVVPDHYCHYYPENVKPKPKLRECSMDPC PSR" assembly_gap 5009970..5010030 /estimated_length=61 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5015135..>5078597 /locus_tag="PAL_GLEAN10009556" mRNA join(<5015135..5015290,5017984..5018131,5019716..5019800, 5023706..5023995,5030356..5030485,5035022..5035214, 5035303..5035482,5043276..5043456,5049234..5050290, 5054811..5054938,5056875..5057003,5066803..5066871, 5070684..5070867,5071047..5071167,5073751..5073851, 5077351..5077666,5078523..>5078597) /locus_tag="PAL_GLEAN10009556" /product="ADAMTS-like protein 3" CDS join(5015135..5015290,5017984..5018131,5019716..5019800, 5023706..5023995,5030356..5030485,5035022..5035214, 5035303..5035482,5043276..5043456,5049234..5050290, 5054811..5054938,5056875..5057003,5066803..5066871, 5070684..5070867,5071047..5071167,5073751..5073851, 5077351..5077666,5078523..5078597) /locus_tag="PAL_GLEAN10009556" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="ADAMTS-like protein 3" /protein_id="ELK18320.1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013098" /db_xref="UniProtKB/Swiss-Prot:P82987" /translation="MQRRSFVCVEESMHGEILQVEEWKCMYAPKPKVMQACNLFDCPK WIAMDWSQCTVTCGRGLRYRVVLCINHRGQHVGGCNPQLKLHIKEECIIPIPCYKPKE KGPVEAKLPWLKQAQELEETRMATEEPTFIPEPWSACSTTCGPGVQAREVKCRVLLTF TQTETELPEEECAGPRLPAERPCLLRACDDSPASLELDVPLHEKDSQMTYDWEYAGFT PCSATCLGGHQEAIAVCLHLQTQQTVNETLCDMVHRPPAMSQACNTEPCPPRWHTGSW GPCSATCGVGIQTRDVHCLHPGEPPTPAEECRDEKPHALQACNQFDCPPSWHIEEWQQ CPRTCGGGTQHRRVACRQLLTDGSFLNLSDGLCQGPKASSRKSCARTDCPPHLAVGDW SKCSVSCGVGTQRRTQVCQRLTAKGQRVPLGEASCRGLPGPPLVRPCHMPVCSSKYVR SPLREIKPEVKAEAGEQGPLILGVQRVYIQTREEKRIQLTVGSRAYLLPNTSVIMKCP VRRFQKSLIQWEKDGHCLQNSRRLGITRSGSLKIHSLAAADSGVYRCVAGSAQDTLVL KLIGTDNRLIAPPALRDHSREHPEMDRLGTTWHKMRQMWTDKNELYPDDGHVHNQPFL RALLGPCRNSPGNPNSWDVKHEQFEAALQQGAYSMDTAQFDELIRNMSQLMETGEVSD DLASQVIYQLVAELAKAQPARMPWGGIREETPPTAQLRGETGSAPQRASAKTSGKLTF KPKGPVLVRQSQPPAISFNKTVNSRIGNTVYITKRTAVINILCELVTPGEAAYTWTKD GVLLQGSDKIIWSGMGKIQIRNPTKKEQGLYGCSVANSLGSDVETSPVLYAEAPIILA TERHISGPQHDHLSVVVGGTVEAAPRANVTIRCPVKGTYVCTATNALGEAVASSVLRL LGPFWRLGDWTHCSATCGHLGARLRRPQCVMANGQEVSEALCGHLQKPPARSQPCGIQ DCPPRWEQSSEALLTIDPRIRLRHSQHRLLLTDGAKLTSAFPGWWCPGRCLGRAVTNQ THRAVCRHHDGADSGCSDGRRPALRRNCSSGACDACWRTGPWRPCTAACGRGFQSRKV DCVHRSSCRLVADRHCAQGAKPSSWQHCVGPSCDSMYPSQVSRLSQVSDPRGARLVSL VSEGPVRMDVLFDTTDSRTDNNTTSGHAMALGTS" assembly_gap 5020960..5020992 /estimated_length=33 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5035969..5036027 /estimated_length=59 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5064421..5064478 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5067089..5068483 /estimated_length=1395 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5084591..>5093539) /locus_tag="PAL_GLEAN10009557" mRNA complement(join(<5084591..5085534,5087499..5087701, 5090900..5091079,5093502..>5093539)) /locus_tag="PAL_GLEAN10009557" /product="Protein FAM154B" CDS complement(join(5084591..5085534,5087499..5087701, 5090900..5091079,5093502..5093539)) /locus_tag="PAL_GLEAN10009557" /codon_start=1 /product="Protein FAM154B" /protein_id="ELK18321.1" /db_xref="UniProtKB/Swiss-Prot:Q658L1" /translation="MRTRCLCQICTCGRHRCPQGTTRIYEHSGVYCPTTEYLEKYPTY GSVLPAQSLKPKQEFRGYRAKMEGITTFKSDYRPYEITPQPRHVPEKYKPKQGDMDLG TTYKRDFNPHKTQPVAIVRPLERQRVKKGKLDTVPTYKDDYRAWDVPKSELYKPEQSY YPPTVKFGNSTTFQDDFVPQKIQPRQSFKPSSVVERSPVPFHADTSHRLDYVPHQLDS KSPRPKEVYRPAEQPFDDLTTHRRDFQGLAGESTKSCRPTDAGVTRHARFEGSTEFRD SFQPWEIPPPRAREVHAHIPPTGTMQLHSTSHLDYVPYQARRVVPVRPISHRRIDHLP FQGKSTTKEDFPAWESCRPGPIKKQPQIPNPSGKFDGLSTFRCHYVPHAPIPTESCKP SQAPFRSTGPLDAVTTYAVEFAPKQQEVCPASYACPPGHVFENTNSQGHKFFREIVPA AKAF" assembly_gap 5086126..5086145 /estimated_length=20 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5090597..5090611 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5093671..5093698 /estimated_length=28 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5094448..>5161599 /locus_tag="PAL_GLEAN10009558" mRNA join(<5094448..5094538,5095401..5095468,5097217..5097301, 5098978..5099111,5100267..5100404,5101927..5102141, 5104429..5104552,5107058..5107148,5108107..5108229, 5110259..5110358,5110721..5110872,5111111..5111277, 5113333..5113471,5140936..5141067,5143730..5143877, 5149010..5149992,5155334..5155518,5161411..>5161599) /locus_tag="PAL_GLEAN10009558" /product="Elongation factor Tu GTP-binding domain-containing protein 1" CDS join(5094448..5094538,5095401..5095468,5097217..5097301, 5098978..5099111,5100267..5100404,5101927..5102141, 5104429..5104552,5107058..5107148,5108107..5108229, 5110259..5110358,5110721..5110872,5111111..5111277, 5113333..5113471,5140936..5141067,5143730..5143877, 5149010..5149992,5155334..5155518,5161411..5161599) /locus_tag="PAL_GLEAN10009558" /note="GO_function: GO:0003924 - GTPase activity [Evidence IEA]; GO_function: GO:0005525 - GTP binding [Evidence IEA]" /codon_start=1 /product="Elongation factor Tu GTP-binding domain-containing protein 1" /protein_id="ELK18322.1" /db_xref="InterPro:IPR000640" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR009000" /db_xref="InterPro:IPR009022" /db_xref="InterPro:IPR020568" /db_xref="UniProtKB/Swiss-Prot:Q7Z2Z2" /translation="MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNG IISSRLAGKLRYMDSREDEQVRGITMKSSAISLLYAKGKEEYLINLIDSPGHVDFSSE VSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQ EAYSHLKNILEQINALTGTLFTSKVLEERAERETESQGNPNSDPGEQVYDWSAGLEDT DDSHLYFSPDQGNVVFTSAVDGWGFGIEHFAKIYSQKIGIKKEVLLKTLWGDYYINMK AKKIMKVDQMGAREARHSDPKVQLSAICSQWLPIAHAVLAMVCQKLPSPLDITAERVE KLMCTGSHTFDSLPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVDAKALPQNKPRPL TQEEIAQRRERARQRHAEKLAAAQGQVPVESAPDGGALATSPEGEDPKGDEQQVESMT PTPVPQEGNNQETFIAFARVFSGVARRGKKIFVLGPKYSPVEFLQRVPLGFSAPPDDL PPIPHMACCTLEHLYLLMGRELEDLEEVPPGNVLGIGGLQDFVLKSATLCSLPSCPPF IPLSFEAAPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEV HLQRCLDDLKERFAKIQISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQMKD EQSRIPEGVQVDSEGLVTMTTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTS SLNEGKNTQMIHQKTQEKIWEFKRKLERHLTGRKWRNIVDQIWSFGPRKCGPNILVNK DEDFQNSVWTGPAGTASKEASRYRDMGNSIVNGFQLAALSGPMCEEPLMGVCFVLEKW DLSEFEEQGTGDKQNEEQSDVVKEERRGGETCPSRDGNQELQDGGSQPSEKGPSRRGE SSLADCYGPLSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVYAVVSK REGRVLQEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSD PFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK" assembly_gap 5133336..5133387 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5169390..5169839 /estimated_length=450 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5177679..5177825 /estimated_length=147 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5187824..5187838 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5191966..5192442 /estimated_length=477 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5193069..5193724 /estimated_length=656 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5193728..>5196256 /locus_tag="PAL_GLEAN10009560" mRNA join(<5193728..5193944,5194768..5195275,5195352..5195636, 5195797..>5196256) /locus_tag="PAL_GLEAN10009560" /product="RNA-binding protein MEX3B" CDS join(<5193728..5193944,5194768..5195275,5195352..5195636, 5195797..5196256) /locus_tag="PAL_GLEAN10009560" /note="GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="RNA-binding protein MEX3B" /protein_id="ELK18323.1" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR018111" /db_xref="UniProtKB/Swiss-Prot:Q6ZN04" /translation="GGGGGGGGGGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDS EPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTG RKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVG LVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGG IIELTDENDFHANGTDVGFDLHHGYRNDSSSSLGSASTDSYFGGGTGGSAAATPRLAD YSPPSPALSFAHNGNNNNNGNGFTYSAGEASVPSPDVCPELQPTFDPAPAPPPGAPLL WAHAPSNANLGLLVHRRLHPGASCPRLSPPLHMAPGTGEHHLARRVRSDPGGGGLAYA AYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAAL VPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS" assembly_gap 5195640..5195793 /estimated_length=154 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5209817..5210016 /estimated_length=200 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5227037..5227503 /estimated_length=467 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5257845..5257859 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5275593..5275644 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5278705..5278828 /estimated_length=124 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5297651..5297694 /estimated_length=44 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5308483..5308727 /estimated_length=245 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5322742..5322760 /estimated_length=19 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5388686..5388751 /estimated_length=66 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5394933..5396201 /estimated_length=1269 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5396674..>5417625 /locus_tag="PAL_GLEAN10009561" mRNA join(<5396674..5396822,5398461..5398536,5400448..5400529, 5402076..5402182,5402932..5403260,5403851..5403998, 5404604..5404647,5405180..5405327,5405846..5405943, 5406937..5407015,5408093..5408329,5408708..5408836, 5409064..5409131,5410879..5411007,5412558..5412668, 5413338..5413463,5414011..5414114,5416028..5416283, 5416917..>5417625) /locus_tag="PAL_GLEAN10009561" /product="Transmembrane channel-like protein 3" CDS join(<5396674..5396822,5398461..5398536,5400448..5400529, 5402076..5402182,5402932..5403260,5403851..5403998, 5404604..5404647,5405180..5405327,5405846..5405943, 5406937..5407015,5408093..5408329,5408708..5408836, 5409064..5409131,5410879..5411007,5412558..5412668, 5413338..5413463,5414011..5414114,5416028..5416283, 5416917..5417625) /locus_tag="PAL_GLEAN10009561" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]" /codon_start=1 /product="Transmembrane channel-like protein 3" /protein_id="ELK18324.1" /db_xref="InterPro:IPR012496" /db_xref="UniProtKB/Swiss-Prot:Q7Z5M5" /translation="GSLDSSLSADDPGDSSDPEQIFQNIQFQKDLMANIRCRPWTMGQ KLRALRRAKEIVLKFEGRLTRTRGYQAAGAELWRRFARLAHNFVVIFIPWEMRIKKIE SHFGSGVASYFIFLRWLFGINIVLTMMTGAFIVIPELIAGQPFGSTASKSIPSAQAAS AQDLDTVWSLGVRRGAATRVCPAGRGGASGRQSDHRRPLQGYLQYSVLFYGYYGRERR IGRAGYRLPLAYFLVGMAVFAYSFVVLLKRMAKNSRTSLASASSDSYAFCWRVFCAWD FLIGNSEAAESKTAAIVNSIREAILEEQQKRRSRNLAVAVCLRVIANTLVLVSLAGSI YLICFVVDRAQKLQQAKKELTLWEKNEVSVVVSLVTMLAPSAPALEQYHPRTTLRIQL ARVLVLYLGNLYSLIIALLDRVNSMSAEEAATKNDTSHWVDSSIFPATRTAPEEEGWP LPTPGPGGSTWAPEVASVPPDTLPLPEANQTAVHSQSPQNQCWETYVGQEMLKLSIID MLFTVASVLLIDLCRGLFVRYLGDYCCWDLERKFPEYGEFKIAENVLHLIYNQGMIWM GSFFSPCLPAFNVLKLMGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLC MLPTVFAIVHYRPSPHCGPFSGQEKMYDIVSETIEEAFPTWLSVAAGAISSPVVILPA LLLLFMLIYYLQSIARSLKLSNQQLRTQIQNASIAPPCRARIQTQEGSTRRPPKDSDL SSQRSSARSATPQNNGHVASFDSSSSRSGRVETVTQPTPPSLRPGPGSASPPLPGIPQ PGPERATGRCPRGPCAGIGGRHKTRPCPAVPCGERVERTHSEPRFRGDVQPVSPPLRA RGASAPRSHGPPAHRYYVVSDCHSPRRPRPTVWPAGRVETDASGDMVVHPRAPQPARW PQPSAEEALRALWVRGPLHGAHSHAGGTEHHGRGPRQSRKQGLKGHVDRPMYEQGQPA PRPPRQARAQPRPEPTSPKSDSASAASSSDLHDGTDHLWVCHGQDSFPRPGGLWGPQR AVDLHRLVCSDV" assembly_gap 5410220..5410231 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5422363..>5430866 /locus_tag="PAL_GLEAN10009563" mRNA join(<5422363..5422461,5423016..5423065,5423389..5423521, 5425967..5426084,5426546..5426639,5430731..>5430866) /locus_tag="PAL_GLEAN10009563" /product="StAR-related lipid transfer protein 5" CDS join(5422363..5422461,5423016..5423065,5423389..5423521, 5425967..5426084,5426546..5426639,5430731..5430866) /locus_tag="PAL_GLEAN10009563" /note="GO_function: GO:0015485 - cholesterol binding [Evidence IEA]; GO_function: GO:0017127 - cholesterol transporter activity [Evidence IEA]; GO_process: GO:0006694 - steroid biosynthetic process [Evidence IEA]" /codon_start=1 /product="StAR-related lipid transfer protein 5" /protein_id="ELK18325.1" /db_xref="InterPro:IPR000799" /db_xref="InterPro:IPR002913" /db_xref="UniProtKB/Swiss-Prot:A1A4M6" /translation="MDAALALQMGEAVAEKVLRYRRDPSGWRICRQGDGVSVSWRPSV EFPGNLYRGEGIVDGTPGSVWDYVKPLAGSLREQWDENVTSFEIIQSFTDTLCVTRTA TPSAAMRLISPRDFVDVVLVRKYEDGTICSNASNVEHTLCPPKPGYVRGFNHPCGCFC EPVPGEPSKTRVVTFFQTDLRGSLPQSVVDAFFPRSMAGLYANLQKAVR" gene complement(<5431619..>5483741) /locus_tag="PAL_GLEAN10009564" mRNA complement(join(<5431619..5431812,5431906..5432031, 5432271..5432529,5433276..5433377,5435037..5435199, 5436383..5437418,5438226..5438455,5440409..5440717, 5440866..5440946,5447625..5448105,5449414..5449486, 5450758..5450890,5452668..5452785,5453136..5453352, 5453843..5453916,5456915..5457029,5459094..5459204, 5460788..5460967,5483154..>5483741)) /locus_tag="PAL_GLEAN10009564" /product="Pro-interleukin-16" CDS complement(join(5431619..5431812,5431906..5432031, 5432271..5432529,5433276..5433377,5435037..5435199, 5436383..5437418,5438226..5438455,5440409..5440717, 5440866..5440946,5447625..5448105,5449414..5449486, 5450758..5450890,5452668..5452785,5453136..5453352, 5453843..5453916,5456915..5457029,5459094..5459204, 5460788..5460967,5483154..5483741)) /locus_tag="PAL_GLEAN10009564" /note="GO_function: GO:0005125 - cytokine activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="Pro-interleukin-16" /protein_id="ELK18326.1" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR020450" /db_xref="UniProtKB/Swiss-Prot:Q14005" /translation="MGTSRAHLTPFGRRPEGPGTPRDNRPVPWAWARAARLQGPGLVP FVSSKSRGFFLFPPPGTYEGVAKSSAATTRQPRARDQDRKKGSLTSSLRMEPHSRSGR SRKATKFRSISRSLVLCNAKASDDGSSPDEQGPGPFEVSLGRGEEGVFHSPVQLADTS EAGPGSVPDLTLCSEAAVRAAGRDRGKNGRRMFFTKTENATAPLPPGPGVGASCSAEL DFPVTRPSAARRAGEPRTLCSDRKCLSQQLDRPAGKTVDTAGPTRSLSTAQLVLPSGA LQASVISSIVLMKGQAKGLGFSIVGGKDSIYGPIGIYVKTIFAEGAAAADGRLQEGDE ILELNGESMGGLTHQDALQKFKQAKKGLLTLTVRTRLTAPHSLSSPLSPPLCRSLSSS TCVAKASGSFLLETPPAPASTAKPNHRVMVEVSLRKEAGVGLGIGLCSVPYFQCISGI FVHALSPGSVAHLDGRLRCGDEIVEINDCPAHCMSLNAVYAILSHCDPGPVPIIVSRH PDPQLDCSRQDGVVVKSLRGRKLVVTPFCAKRLESSWHGRPASEKEREKHSAPPLRRA PKVLVRSSSDSSYVSGSPGGSPSSGGEQPPSGLVARTRSPGIQDPGPLPETASGPPQD SLRPRENQDDQPPPRLKKSFEIFVRKPTSSKPKPPPRKYFKSDPPKSLEEQEDSCPPG RTVSARAQVRAGSWGFHESSPHTASSSHGLTGSCARRRTVTSSRSDTPKTAGIPPKQI RSTTELEKAIEIHHDSTTDLSIPKQPKSPYGAEGLDENPPKPQKHYEIQFIATPHGVY PRPMSRKVIVLGRLHQNWHGTHRLQRTSSPPPRASLAFSRLTAPVLTLPRFLFTPQEA RELLPPLPPQEVPAGAVSQAGACCPGPAAGLQTACPSEAEPRTAGSPVAPTSPARHPV LTRQARVDHGLDSAAEDPWVRISDCIKSLFSPVMSENHGHVPLRSPSSLVQEDGVQDH RDGSPTELDATSNAPKAYKSADGGTVKKGPPVAPKPAWFRQSLKGLRHRGPDARPLPA PREHLGPPTRASSSIRQRISNFETFGSSQLCDKGAQRPGPQPPGTLGDTAKSPGKPDG GWGPGPSGREALPTDQPPSGSHGATEASAPCAPGTPPPERLPSHAALAPDSVLRPPSM QTVAPQGPVVKAPSQRARSFPLTRASSCEARLPQEDTGRLYSISSRVSSAVMKSLLCL PSSPSWDQAPCSPQEVPSPVSSSRPDAAADSPEGSAASDTGFSLNLSELREYSEGLGE PTGADDCVPPAAGQSVISLLSSKELQQLIEEVRVLDEATLKQLDSIHVTVLHKEEGAG LGFSLAGGADLENKVVTVHRVFPSGLASREGTIQKGNEVLSINGKSLKGATHNDALAI LRQARDPRQAVIVTRKPTLEATPDLSPTTDSAASASGAGDVSAESAAEATVCTVTLDK TSAGLGFSLEGGKGSLHGDKPLVINRIFRGAASGQSDTVRPGDEILQLAGSAVQGLTR FEAWNVIKALPDGPVTLLIRRKGLQSEGTTASGNP" assembly_gap 5446464..5447182 /estimated_length=719 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5460991..5461173 /estimated_length=183 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5466629..5466646 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5468733..5468777 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5504935..5505122 /estimated_length=188 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5521401..>5527864) /locus_tag="PAL_GLEAN10009565" mRNA complement(join(<5521401..5521622,5523094..5523252, 5526588..5526672,5527632..>5527864)) /locus_tag="PAL_GLEAN10009565" /product="hypothetical protein" CDS complement(join(5521401..5521622,5523094..5523252, 5526588..5526672,5527632..5527864)) /locus_tag="PAL_GLEAN10009565" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18327.1" /db_xref="UniProtKB/Swiss-Prot:Q6P656" /translation="MQLSITEDGYVHNGDKVILVNLDHPEVEADLFLRGDLSLCLTPH EIRAHLSDKFEVPCGLSAAPTKIPVGRNTFTILSADSEAVGQVLRYGQNFRLGITGGF EDTMLYLSSDHRTLLKSSKKSWLQEVYLTDEVSYLNCWQAAFPDHQLRLEYEGFPVPS VFIPSCSSTYFGKEAEVAAHTHLDSHRVEKPRNHWVLVTGSPRQDSPTMLHLPKPPVE DTCALEQAADPGAQ" assembly_gap 5529127..5529520 /estimated_length=394 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5529622..>5529825) /locus_tag="PAL_GLEAN10009566" mRNA complement(<5529622..>5529825) /locus_tag="PAL_GLEAN10009566" /product="hypothetical protein" CDS complement(5529622..5529825) /locus_tag="PAL_GLEAN10009566" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18328.1" /db_xref="UniProtKB/Swiss-Prot:Q6P8Y0" /translation="MAQNLYGPGVRMGNWNEDVYLEEVRRTSPDALPLAAEEHPQVPP AFEHPKPPFSPALTKYSYNLPLL" assembly_gap 5547895..5548114 /estimated_length=220 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5555050..5555066 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5556095..5556302 /estimated_length=208 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5568769..5568802 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5573035..5573060 /estimated_length=26 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5580654..>5581613) /locus_tag="PAL_GLEAN10009567" mRNA complement(<5580654..>5581613) /locus_tag="PAL_GLEAN10009567" /product="Mesoderm development candidate 1" CDS complement(5580654..5581613) /locus_tag="PAL_GLEAN10009567" /codon_start=1 /product="Mesoderm development candidate 1" /protein_id="ELK18329.1" /db_xref="UniProtKB/Swiss-Prot:Q9H1K6" /translation="MQLVADLLLLSSEARPVLFEGPASAGAGAESFEQCRDTIIARTK GLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQH GLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASE KSRDRFAREQFKLGVKCMSTSASALLACVREVKAAPSELARSRCALFSGPLVQAVSAL VGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLALHPDGGAKM SDHRERLRNSACAVSEGCTLLSQALRERSSPRTLPPVNSNSVN" assembly_gap 5582142..5582960 /estimated_length=819 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5582986..>5595180 /locus_tag="PAL_GLEAN10009568" mRNA join(<5582986..5583172,5590249..5590370,5593576..5593808, 5594925..>5595180) /locus_tag="PAL_GLEAN10009568" /product="LDLR chaperone MESD" CDS join(5582986..5583172,5590249..5590370,5593576..5593808, 5594925..5595180) /locus_tag="PAL_GLEAN10009568" /codon_start=1 /product="LDLR chaperone MESD" /protein_id="ELK18330.1" /db_xref="InterPro:IPR019330" /db_xref="UniProtKB/Swiss-Prot:Q3T0U1" /translation="MLARCAAPPPGSGRLREDAAAHHGRRARPRSPGRGGRDRSEAAG PGLRARPGEMGRRRLLALPRAAESPAGTPGQAAPPPPKKKKDIRDYNDADMARLLEQW EKDDDIEEGDLPEHKRPSAPIDFSQVDPGKPESILKMTKKGKTLMMFVTVSGSPTEKE TEEITSLWQGSLFNANYDVQRFIVGSNRAIFMLRDGGYAWEIKDFLVSQDRCADVTLE GQVYPGKGGGGQETNKTKQEKGKKKTGDAKSRASKENNRAGSRREDL" assembly_gap 5589409..5590232 /estimated_length=824 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5601823..>5602365 /locus_tag="PAL_GLEAN10009569" mRNA <5601823..>5602365 /locus_tag="PAL_GLEAN10009569" /product="hypothetical protein" CDS 5601823..5602365 /locus_tag="PAL_GLEAN10009569" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18331.1" /translation="MGQERGRRSSSRDRSDPGAARERRTQVFPSCRSSPRLSRGPGRE QGTKRQLRGPEADQQLFEPREQLRWFAEKGPAPDAVCWLHLHSRQTGIAPMELLQRCT PVRGPTGGSNQVEAARRPCCLPLREVAQAGKKTVPSSGLALAPTVQLSALPGVRRHRH LTTCPTRLQALQLGTATATL" gene complement(<5602998..>5653052) /locus_tag="PAL_GLEAN10009570" mRNA complement(join(<5602998..5603125,5604241..5604341, 5606276..5606433,5607056..5607142,5607285..5607489, 5610493..5610678,5611556..5611767,5613254..5613469, 5614624..5614804,5617068..5617223,5617305..5617340, 5619647..5619778,5620700..5620785,5622242..5622370, 5623160..5623229,5623838..5624043,5629725..5629934, 5631115..5631290,5637950..5638141,5638900..5639032, 5642249..5642370,5642929..5643024,5644067..5644137, 5646507..5646686,5647525..5647761,5648435..5648573, 5649056..5649202,5652962..>5653052)) /locus_tag="PAL_GLEAN10009570" /product="Protein KIAA1199" CDS complement(join(5602998..5603125,5604241..5604341, 5606276..5606433,5607056..5607142,5607285..5607489, 5610493..5610678,5611556..5611767,5613254..5613469, 5614624..5614804,5617068..5617223,5617305..5617340, 5619647..5619778,5620700..5620785,5622242..5622370, 5623160..5623229,5623838..5624043,5629725..5629934, 5631115..5631290,5637950..5638141,5638900..5639032, 5642249..5642370,5642929..5643024,5644067..5644137, 5646507..5646686,5647525..5647761,5648435..5648573, 5649056..5649202,5652962..5653052)) /locus_tag="PAL_GLEAN10009570" /codon_start=1 /product="Protein KIAA1199" /protein_id="ELK18332.1" /db_xref="InterPro:IPR011050" /db_xref="InterPro:IPR019316" /db_xref="UniProtKB/Swiss-Prot:Q8WUJ3" /translation="MGAAGRQDFFKVILMSSWLLLSRVPGATSTVAAECPDQSPELQP WTPGHDRDHHVYIGQGRALLLTSSATVHSIHISEGGKLVIKDQDETIVLRTRHILIDS GGELHAGSALCPFQGNFSIVLYGRADEGAQPDPYFGLKYIGVGRGGTLELHGQKKLSW TFLNKTLRPGGMEEGGYFFERSWGHRGVIVHVIDPQSGTVIHSDRFDTYRYKKESERL AQYLNAVPNGRILSVAVNDEGSRNLDDVARKAMTRLGSKHFLRLGFRHPWSFLTVKGN PASSVEDHTEYHGHRGSAAARVSKVFRSEHGELFSVSSSSEWVQDVEWTDWFHHDKVS HSKGGEKISDLRAAHPGKICNRPLDIQATTVDGVNLTTEVVYKRGQDYRFVCYDQGHA CQSYRVRFLCGRPVRPRLTVTIDTNVNSTILTLEDNVQSWKPGDTLVVASTDYSMYQA EEFQVLPCRACASNQVRVAGKPMYLHMGEEVDGVDMRAEVGLLSRNLVVMGEMEDACY PYTKHVCSFFDFDTFGGHIKFALGFTAAHLEGVELKHMGQQLVGQYPVHFHLAGDVDE QGGYDPPTYVRDLSIHHTFSRCVTVHGSNGLLIKDVVGYNSLGHCFFTEDGPEERNTF DHCLGLLVKSGTLLPSDRDSKMCRTITEDAYPGYIPKPRQDCNAVSTFWMANPNNNLV NCAAAGSEETGFWFIFHHVPTGPSVGMYSPGYSEHIPLGKFHNNRAHSNYRAGMIIDN GVKTTEASAKDKRPFLSVISARYSPHQDADPLKPREPAIIKHFTAYKNQDHGAWLRGG DVWLDSCRFADNGIGLTLASGGTFPYDDGSKQEIKNSLFVGESRNVGTEMMDNRIWGP GGLDHSGRTLPIGQDFPIRGIQFYDGPINVQNCTFRKFVALEGRHTSALAFRLNNAWQ SCPHNNVTSITFEDVPITSRVFFGEPGPWFNQLDMDGDKTSVFHDVDGSVSEYPGSYL TKADNWLVRHPDCIDVPDWRGAICSGRYAQMYIQAYKTSNLRMKIIKNDSPSHPLSLE GALTRSTHYQQYQPVVTLHKGYTIHWDQTAPAELAIWLINFNKGDWIRVGLCYPRGTS FSILSDVHNRLLKQTSKTGTFVRTLQMDKVDQSFPGRSHYYWDEASGLLFLKLTAQNP RERFAFCSVKGCERIRIKALIPKDAGVSDCSATAYPRFAERATVDVPMPRKLVGAQLK TQDHFLEVKMESFGQRFFHLLSDFAYIEVDGKKYPSLEDGIQVLVIDGSRGHVLSHTG FRNSVLQGVPWQVFSYVADIPDNSIVLMASRGRYVSRGPWTHVLEKLGADEGLRLKEK MAFVGFKGSFRPTWVNLNTDDHKAKIFQVVPIPVVRKRKL" assembly_gap 5608086..5608110 /estimated_length=25 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5612181..5612216 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5651041..5651075 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5656360..5667472 /estimated_length=11113 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5686342..5686958 /estimated_length=617 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5696945..5696958 /estimated_length=14 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5720448..5720567 /estimated_length=120 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5721121..>5721324 /locus_tag="PAL_GLEAN10009572" mRNA <5721121..>5721324 /locus_tag="PAL_GLEAN10009572" /product="hypothetical protein" CDS 5721121..5721324 /locus_tag="PAL_GLEAN10009572" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18333.1" /translation="MSSPHLRTPSPPRGSDRKESMQHGERQAPATASKGTVQDHRWPP PRQFTGIKGTSVFRHLCQEVRVA" assembly_gap 5728720..5728766 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5729930..5729969 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5734585..5734982 /estimated_length=398 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5742273..5742400 /estimated_length=128 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5743829..5743888 /estimated_length=60 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5744637..5745839 /estimated_length=1203 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5746931..>5755499) /locus_tag="PAL_GLEAN10009574" mRNA complement(join(<5746931..5747150,5750628..5750807, 5755225..>5755499)) /locus_tag="PAL_GLEAN10009574" /product="Abhydrolase domain-containing protein FAM108C1" CDS complement(join(5746931..5747150,5750628..5750807, 5755225..5755499)) /locus_tag="PAL_GLEAN10009574" /codon_start=1 /product="Abhydrolase domain-containing protein FAM108C1" /protein_id="ELK18334.1" /db_xref="UniProtKB/Swiss-Prot:Q5ZJX1" /translation="MLTPEVIPGAEPSMCPHLQLQGGQGERCSGKIQRVRNALCPPRE TKDASGVFVQELKELARFRSPIISHRHMTAMQGQLSDCLVVSCVLQPLYGVSPENIIL YGQSIGTVPTVDLASRYECAAVILHSPLTSGLRVAFPDTRKTYCFDAFPSIDKISKVT SPVLVIHGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFIS HELPNS" assembly_gap 5762688..5762719 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5768534..5769142 /estimated_length=609 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5771509..5771537 /estimated_length=29 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5773335..5774600 /estimated_length=1266 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5785753..5785773 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5793017..>5848245) /locus_tag="PAL_GLEAN10009575" mRNA complement(join(<5793017..5793115,5794555..5794691, 5799902..5800052,5800518..5800656,5801687..5801786, 5804059..5804182,5804974..5805046,5807871..5808022, 5810634..5810708,5812568..5812702,5814004..5814080, 5823145..5823245,5823546..5823602,5827171..5827273, 5844478..5844691,5848072..>5848245)) /locus_tag="PAL_GLEAN10009575" /product="Aryl hydrocarbon receptor nuclear translocator 2" CDS complement(join(5793017..5793115,5794555..5794691, 5799902..5800052,5800518..5800656,5801687..5801786, 5804059..5804182,5804974..5805046,5807871..5808022, 5810634..5810708,5812568..5812702,5814004..5814080, 5823145..5823245,5823546..5823602,5827171..5827273, 5844478..5844691,5848072..5848245)) /locus_tag="PAL_GLEAN10009575" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]; GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0004871 - signal transducer activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0030528 - transcription regulator activity [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO_process: GO:0007165 - signal transduction [Evidence IEA]; GO_process: GO:0045449 - regulation of transcription [Evidence IEA]" /codon_start=1 /product="Aryl hydrocarbon receptor nuclear translocator 2" /protein_id="ELK18335.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR001067" /db_xref="InterPro:IPR001092" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013767" /db_xref="UniProtKB/Swiss-Prot:Q9HBZ2" /translation="MTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNK STDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFG STLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFI CRMRCGSAPLDHVPLNRISTMRXSSSCRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGM TIPEEDADVGQGSKYCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHSSDAVITFVDP RCISVIGYQPQDLLGKDILEFCHSEDQSHLRESFQQVVKLKGQVLSVMYRFRTKSREW LLIRTSSFTFQNPYSDEIEYVICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPN LPAGVHESGKSVEKADAIFSQERDPRFAEMFAGISASEKKMMSSASTAGTQQIYPQGS PFPAGHSGKAFSSPVVHVPGVNDMQSPSPAGQSMSQISRQLSQSQAAWAGSRPPFPGQ SSKTQSTPFGIGTSHTYPADPSSYSPLSSPATSSPSGNAYSSLASRTPGFAESGQSSG QFQGRPSEVWSQWQSQHHGQQSGEQHAHQQPGQTEVFQDMLPMPGDPTQGTANYNIED FADLGMFPPFSE" assembly_gap 5804502..5804652 /estimated_length=151 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5823527..5823547 /estimated_length=21 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5827358..5827374 /estimated_length=17 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5827657..5828613 /estimated_length=957 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5847969..5847998 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5852060..5852586 /estimated_length=527 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5862888..5863478 /estimated_length=591 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5875135..5876382 /estimated_length=1248 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5881754..5881787 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5892245..5892513 /estimated_length=269 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5894474..5894526 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5894779..5895003 /estimated_length=225 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5903377..5903418 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5907110..5908096 /estimated_length=987 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5912974..>5928102) /locus_tag="PAL_GLEAN10009580" mRNA complement(join(<5912974..5913053,5914456..5914573, 5915244..5915345,5916958..5917004,5919030..5919105, 5920600..5920730,5921450..5921549,5922790..5922842, 5922947..5923044,5924466..5924556,5925019..5925068, 5925559..5925680,5926428..5926538,5928022..>5928102)) /locus_tag="PAL_GLEAN10009580" /product="Fumarylacetoacetase" CDS complement(join(5912974..5913053,5914456..5914573, 5915244..5915345,5916958..5917004,5919030..5919105, 5920600..5920730,5921450..5921549,5922790..5922842, 5922947..5923044,5924466..5924556,5925019..5925068, 5925559..5925680,5926428..5926538,5928022..5928102)) /locus_tag="PAL_GLEAN10009580" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_function: GO:0004334 - fumarylacetoacetase activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]; GO_process: GO:0009072 - aromatic amino acid family metabolic process [Evidence IEA]" /codon_start=1 /product="Fumarylacetoacetase" /protein_id="ELK18336.1" /db_xref="InterPro:IPR002529" /db_xref="InterPro:IPR011234" /db_xref="InterPro:IPR015377" /db_xref="UniProtKB/Swiss-Prot:A5PKH3" /translation="MSFVPVAEDSDFPVHNLPYGVFSTTDNPRPRIGVAIGDQILDLS VVKHLFTGPVLSKHQDVFDQPTLNSFMGLGQAAWKEARAFLQNLLSASQARLRDDREL QKRAFVSQVSATMHLPATIGDYTDFYSSRHHATNVGVMFRSKENALAPNWLHLPVGYH GRASSVVVSGTPIRRPMGQMRPDDSKPPVYGACKLLDIELEMACFVGPGNRFGEPIPI SRAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPN PEQDPQPLPYLRHDQPYTFDIHLSVALKGEGMSQAVTICKSNFKHMYWTMLQQLTHHS VNGCNLRPGDLLGSGTISGPEPESFGSLLELSWRGTKAIELGNGQTRKFLLDGDEVVI TGHCQGDGYRVGFGQCAGRVLPALSPA" assembly_gap 5928251..5928421 /estimated_length=171 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<5931631..>5938585) /locus_tag="PAL_GLEAN10009582" mRNA complement(join(<5931631..5931779,5933715..5933828, 5936107..5936207,5937065..5937182,5938432..>5938585)) /locus_tag="PAL_GLEAN10009582" /product="AN1-type zinc finger protein 6" CDS complement(join(5931631..5931779,5933715..5933828, 5936107..5936207,5937065..5937182,5938432..5938585)) /locus_tag="PAL_GLEAN10009582" /note="GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="AN1-type zinc finger protein 6" /protein_id="ELK18337.1" /db_xref="InterPro:IPR000058" /db_xref="InterPro:IPR002653" /db_xref="UniProtKB/Swiss-Prot:Q6FIF0" /translation="MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSS NGRISPPATSVSSLSESLPVQCTDGGVPGVPAAQSAGDSTSSSLQPSPVSNQSLLSES VASSQVDSTSVDKAIPETEDLQASVSDTAQQPSEEQGKSLEKPKQKKNRCFMCRKKVG LTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI" assembly_gap 5932942..5932999 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5943343..5943570 /estimated_length=228 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5957597..5957649 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 5973299..5973769 /estimated_length=471 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <5979666..>5980370 /locus_tag="PAL_GLEAN10009583" mRNA <5979666..>5980370 /locus_tag="PAL_GLEAN10009583" /product="hypothetical protein" CDS 5979666..5980370 /locus_tag="PAL_GLEAN10009583" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18338.1" /translation="MHRAALADWAGQVWLSQRAARSRSLDPGSWGWRGARSRRQVLTL RCFCVALNASLLISPSGRATLECVPTSTCSKGHGPKGDRLSGSAQGRRVSGADADIEP ALGKPDGCSLSLSKVLGQRGEAEPQARSLEIRRPQVGVDPQLLRGAALLGVWETVPSL TLFTGHFHTRGNGVGKHGGSDNLGLRFGARLRCPLGVCSLIWTVRVCEVAVFPDRISR LVTSYPAQRRDSGRVE" assembly_gap 6002967..6003023 /estimated_length=57 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6009622..>6018554 /locus_tag="PAL_GLEAN10009585" mRNA join(<6009622..6009880,6010991..6011454,6018447..>6018554) /locus_tag="PAL_GLEAN10009585" /product="Bcl-2-related protein A1" CDS join(6009622..6009880,6010991..6011454,6018447..6018554) /locus_tag="PAL_GLEAN10009585" /note="GO_process: GO:0042981 - regulation of apoptosis [Evidence IEA]" /codon_start=1 /product="Bcl-2-related protein A1" /protein_id="ELK18339.1" /db_xref="InterPro:IPR000712" /db_xref="InterPro:IPR002475" /db_xref="InterPro:IPR013282" /db_xref="UniProtKB/Swiss-Prot:Q16548" /translation="MCLVRPETRPKPPALPLAGKFAVSATFARMAGKADETAGVHFAA LTHALVGEPGPSARERVTDASVDRAATWFQAWPFTHLAAALRDCLSRCPGNKLEREKV MDREFGYIHTLAQDYLKHVLQIPQPGSGPSRASRVLQDVAFSVQKEVERSLKPCLDNF DVVSVETARRIFNQVMEKEFEDGVINWGRIVTIFAFEGILIKKLLEERMGPDVDPHQE ISYFVAEFIAKNTGEWIRQNGGWENGFVKKFEPRSGWMTFLEVTGKICEMLSLLKQYY " gene <6022765..>6029520 /locus_tag="PAL_GLEAN10009586" mRNA join(<6022765..6022881,6026862..6027123,6029315..>6029520) /locus_tag="PAL_GLEAN10009586" /product="5-formyltetrahydrofolate cyclo-ligase" CDS join(6022765..6022881,6026862..6027123,6029315..6029520) /locus_tag="PAL_GLEAN10009586" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]; GO_process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]" /codon_start=1 /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="ELK18340.1" /db_xref="InterPro:IPR002698" /db_xref="UniProtKB/Swiss-Prot:P49914" /translation="MAAAAVRSAKRSLRAELKQRLRTVSAEERLRQSRLLTQKVIAHS QYQKSKRISIFLSMQDEIETEEIIKDIFQQGKTCFIPRYQFQSNHMDMVKLASPEEIF SLPKTSWNIHQPGEDEVREEALSTDTCGLGCEGVGGGTCSSVRLQSGSWRCCSLCSAP VGSLCGRYHLAPHSAPGVLTGISSLECGSFSTKA" gene <6038072..>6044035 /locus_tag="PAL_GLEAN10009587" mRNA join(<6038072..6038213,6043803..>6044035) /locus_tag="PAL_GLEAN10009587" /product="5-formyltetrahydrofolate cyclo-ligase" CDS join(6038072..6038213,6043803..6044035) /locus_tag="PAL_GLEAN10009587" /note="GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]; GO_process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]" /codon_start=1 /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="ELK18341.1" /db_xref="InterPro:IPR002698" /db_xref="UniProtKB/Swiss-Prot:P49914" /translation="MLTDASQLGVVVLDSGAGGPSSSPHACSAALATLMPFLRPVPRL PFSRGLDLIFMPGLGFDRQGNRLGRGRGYYDAYLKRCAQQQHAKPYTMALAFKEQICL QVPVDENDVKVDEVLYEDSSAS" assembly_gap 6061912..6061964 /estimated_length=53 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6105411..6105437 /estimated_length=27 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6110696..6110828 /estimated_length=133 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6124514..6124616 /estimated_length=103 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6126778..6126792 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6130891..>6131082) /locus_tag="PAL_GLEAN10009588" mRNA complement(<6130891..>6131082) /locus_tag="PAL_GLEAN10009588" /product="hypothetical protein" CDS complement(6130891..6131082) /locus_tag="PAL_GLEAN10009588" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18342.1" /translation="MATAHACLGSWDLEKVKLMLGFWLSTDPEPATAFLPWTPDSLQL PIPLFTDRARPESGWETDS" gene complement(<6133409..>6142368) /locus_tag="PAL_GLEAN10009589" mRNA complement(join(<6133409..6133606,6136017..6136268, 6140086..>6142368)) /locus_tag="PAL_GLEAN10009589" /product="UPF0258 protein KIAA1024" CDS complement(join(6133409..6133606,6136017..6136268, 6140086..6142368)) /locus_tag="PAL_GLEAN10009589" /codon_start=1 /product="UPF0258 protein KIAA1024" /protein_id="ELK18343.1" /db_xref="InterPro:IPR009626" /db_xref="UniProtKB/Swiss-Prot:Q9UPX6" /translation="MEAGQDTSVFLVKVLEELDSKQNTVSYQDLCKSLCARFDLPQLA KLRSVLFYTACLDPGFPATLFKDKMNCTVNHQQSKKIMVAADIVTIFNLLQMNGGATR EKLPGGRPKARKEASCESCRSDAEVCGAAECEPLDCSRGDRPFGRAPPARQPSRGCDA GCRDCPQFVPAAEPNFLLGVGREAKARAASLDRLQALAPFPVGSPRPCEMQRTYFPMN LDSDCASDQFSLPSAPGVKDTFVSSDEPFVGQSCVQKRNIFKEDFHNLMAVSPGLAGR AHEAEGARGEPQSRKEPHKTPFFNHSFEMPYSSQYLNPACSPVPDRRRAKHESLDDLQ ASTYFGPTPVTGTQDARRCPGRPSKQTPWPAKSWSLNTEEVPDFERSFFNRNPSEEKP RYPSPSGQSPSFPAPDRRPAYLTPQDPQPMRPVGYVAKPGGLKPKEISASADLEKHEP VKKFKDKSIGCTGGQLSSDTSSVGTQTEQHVPETKKRRDLCASGQGKYTKQSDDDSEI VSDDISDIFRFLDDMSISGSTGVIQSSCYNSTGSLSQLHKSDCDSSPEHNIVKITNGL PGSKGEKGNRPESSHHSEEELKTSVCKLVLRIGEIERKLESLSGVREEISQVLGKLNK LDQKMQQPEKVSVQADLNSLTSEAPSDESASPRVFRAHSGSHGPKLENSADWCCSDAS GSNSESLRVKALKKSLFARPSSRSLTEENSATESKIASISNSPRDWRTITYGNRVGLG EDEAKDGGPGESKDWHRKPKEADRQYDVPPQHRLPKQPKDGFLVEQVFSPHPHPASVR AHGNNPLYTNMRRTELAEVKRGPPSWTVEDFARNAGDKGKLTALDLQTQESLNPNNLE YWMEDIYTPGYDSLLKRKEAEFRRAKVCKMAALIAAAACTVILVIVVPICTMKS" assembly_gap 6138462..6138477 /estimated_length=16 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6145206..6145235 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6147903..6148001 /estimated_length=99 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6151668..6152448 /estimated_length=781 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6164621..6164632 /estimated_length=12 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6167729..6167825 /estimated_length=97 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6179489..6179498 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6181110..>6186688) /locus_tag="PAL_GLEAN10009591" mRNA complement(join(<6181110..6181334,6184820..6185068, 6186521..>6186688)) /locus_tag="PAL_GLEAN10009591" /product="Transmembrane emp24 domain-containing protein 3" CDS complement(join(6181110..6181334,6184820..6185068, 6186521..6186688)) /locus_tag="PAL_GLEAN10009591" /note="GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Transmembrane emp24 domain-containing protein 3" /protein_id="ELK18344.1" /db_xref="InterPro:IPR009038" /db_xref="UniProtKB/Swiss-Prot:Q9Y3Q3" /translation="MGRAAPHPPPPLLLLLLLLGLERPQGAELTFELPDNAKQCFHEQ VEQGVRFSLDYQVITGGHYDVDCYVEDPLGNTIYRETKKQYDSFTHRAEVKGVYQFCF SNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEALKTVIESQTH YRLREAQDRARAEDLRSRVSCWSVGETIVLFVVSASQVLLLRSFFTERRVARS" assembly_gap 6186708..6186876 /estimated_length=169 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6196886..>6197656) /locus_tag="PAL_GLEAN10009593" mRNA complement(<6196886..>6197656) /locus_tag="PAL_GLEAN10009593" /product="hypothetical protein" CDS complement(6196886..6197656) /locus_tag="PAL_GLEAN10009593" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18345.1" /translation="MDLFTYKISADYQIVPRVRFWGHEHCALEDRSPARGHVAGRRDH VHLFQVRSCSFHHRRVAGSGASSAFLTLNPRLGGGQIKDVRAERKSPDLRVDSRSPCR QPGCESRAQGEAQTQLHCVELFTFHTQTADSPGRCHRRPPQWMARASFWATAQEIPLK PTYGHKQSHCCLRTRFPRSLSGASRPVTAQALPGPGCPPQSSRLGSGTGEASEALFAE TQRACQLPPAFLPQLLPDRTVKRRLTSGGKALRQRISL" assembly_gap 6203130..6206572 /estimated_length=3443 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6234725..6234943 /estimated_length=219 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6235212..6235224 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6237638..6237695 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6244561..6244634 /estimated_length=74 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6245718..>6303020 /locus_tag="PAL_GLEAN10009594" mRNA join(<6245718..6245993,6257195..6257301,6258171..6258318, 6264182..6264274,6266322..6266575,6270588..6270667, 6271917..6272313,6276870..6276988,6278659..6278819, 6281834..6281897,6282269..6282405,6282970..6283052, 6283994..6284242,6285008..6285381,6285793..6285918, 6287301..6287471,6288006..6288112,6288492..6288604, 6289672..6289732,6293664..6293861,6294907..6294986, 6299977..6300094,6300937..6301005,6302928..>6303020) /locus_tag="PAL_GLEAN10009594" /product="Ras-specific guanine nucleotide-releasing factor 1" CDS join(6245718..6245993,6257195..6257301,6258171..6258318, 6264182..6264274,6266322..6266575,6270588..6270667, 6271917..6272313,6276870..6276988,6278659..6278819, 6281834..6281897,6282269..6282405,6282970..6283052, 6283994..6284242,6285008..6285381,6285793..6285918, 6287301..6287471,6288006..6288112,6288492..6288604, 6289672..6289732,6293664..6293861,6294907..6294986, 6299977..6300094,6300937..6301005,6302928..6303020) /locus_tag="PAL_GLEAN10009594" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_process: GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO_process: GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO_process: GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]" /codon_start=1 /product="Ras-specific guanine nucleotide-releasing factor 1" /protein_id="ELK18346.1" /db_xref="InterPro:IPR000048" /db_xref="InterPro:IPR000219" /db_xref="InterPro:IPR000651" /db_xref="InterPro:IPR001849" /db_xref="InterPro:IPR001895" /db_xref="InterPro:IPR008937" /db_xref="UniProtKB/Swiss-Prot:Q13972" /translation="MQKGIRLNDGHVASLGLLARKDGTRKGYLSKRSSDNTKWQTKWF ALLQNLLFYFESDSSSRPSGLYLLEGCVCDRAPSPKPALSAKEPLEKQHYFTVNFSHE NQKALELRTEDAKDCDEWVAAIAHASYRTLATEHESLMQKHLHLLQIVETEKTVAKQL RQQIEDGEVEIERLKAEIASLLKDHERVQSTQTTAPNDEDSDIKKIKKVQSFLRGWLC RRKWKTIIQDYIRSPHADSMRKRNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASS KKPPITHDDVSSIFLNSETIMFLHQIFYQGLKARISSWPTLVLADLFDILLPMLNIYQ EFVRNHQYSLQILAHCKQNRDFDKLLKHYEAKPDCEERTLETFXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAIMHDEVSETENIRKNLAIERMIIEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRG RLGSLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVVSLIDCTLLEDAESTEEE AKGSGQDMDRLDFKIGVEPKDSPPFTVTLVASSRQEKAAWTSDISQCVDNIRCNGLMM NAFEENSKVTVPQMIKSDASLYCDDVDIRFSKTMNSCKVLQIRYASVGRLLERLTDLR FLSIDFLNTFLHSYRVFTTAVVVLDKLITIYRKPISAIPARSLELLFASGQNNKLLYG DPPKSPRATRKFSSPPPLTITKTSSPSRRRKLSLNIPIITGGKALDLAALGCSSNGYT GVYSAMSPFSKATLDTSKLYVSGGFTNKITDEGDTTSEKPEDPSAPSKQSSDVSMREE SDTDDNQSDDGDTETSPSKSPTTPKSIKSRSPSEFPLFSYNNGVVMTSCRELDNNRSA LSAASAFAIATAGANEGTPNKEKYRRMSLASAGFPPDQRNGDKEFVIRRAATNRVLNV LRHWVSKHSQDFETNDELKCKVIGFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDN QTTLEEIMQMISNLIASEIVRNEDVTARASAIEKWVAVADICRCLHNYNAVLEITSSM NRSAIFRLKKTWLKVSKQTKALIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYL TDLAFIEEGTPNYTEDGLVNFSKMRMISHIIREIRQFQQTAYKIEHQAKVTQYLLDQS SVMDEESLYESSLRIEPKLPT" assembly_gap 6249315..6249379 /estimated_length=65 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6250154..6250451 /estimated_length=298 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6272091..6272308 /estimated_length=218 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6278858..6279254 /estimated_length=397 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6291055..6291441 /estimated_length=387 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6303344..6303479 /estimated_length=136 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6310390..6329497 /estimated_length=19108 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6335499..>6342472 /locus_tag="PAL_GLEAN10009597" mRNA join(<6335499..6335594,6336660..6336746,6337274..6337329, 6337589..6337670,6338197..6338265,6340205..6340311, 6341579..6341704,6342397..>6342472) /locus_tag="PAL_GLEAN10009597" /product="Cathepsin H" CDS join(6335499..6335594,6336660..6336746,6337274..6337329, 6337589..6337670,6338197..6338265,6340205..6340311, 6341579..6341704,6342397..6342472) /locus_tag="PAL_GLEAN10009597" /note="GO_function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="Cathepsin H" /protein_id="ELK18347.1" /db_xref="InterPro:IPR000668" /db_xref="UniProtKB/Swiss-Prot:O46427" /translation="MTRKPCLHHLRTHDTLKQQGYVLARTCRPFGHGGCGSCWTFSTT GALESAIAIKTGKMLSLAEQQLVDCAQNFNNHGCKGGLPSQAFEYIRYNKGIMGEDTY PYQGKDGTCKFQPEKAIAFVKDVANITINDEEAMVEAVALYNPVSFAFEVTEDFMLYR KGIYSSTSCHKTPDKVNHAVLAVGYGEENGKPYWIVKNSWGPQWGMNGYFLIERGKNM CGLAACASYPIPLV" assembly_gap 6338360..6338394 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6342263..6342280 /estimated_length=18 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6343551..6345230 /estimated_length=1680 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6353715..>6379125) /locus_tag="PAL_GLEAN10009598" mRNA complement(join(<6353715..6353799,6355500..6355584, 6355843..6356015,6356517..6356605,6358907..6358995, 6359505..6359530,6364055..6364135,6364936..6365022, 6366087..6366203,6368610..6368677,6370289..6370335, 6379083..>6379125)) /locus_tag="PAL_GLEAN10009598" /product="Mortality factor 4-like protein 1" CDS complement(join(6353715..6353799,6355500..6355584, 6355843..6356015,6356517..6356605,6358907..6358995, 6359505..6359530,6364055..6364135,6364936..6365022, 6366087..6366203,6368610..6368677,6370289..6370335, 6379083..6379125)) /locus_tag="PAL_GLEAN10009598" /note="GO_component: GO:0005634 - nucleus [Evidence IEA]" /codon_start=1 /product="Mortality factor 4-like protein 1" /protein_id="ELK18348.1" /db_xref="InterPro:IPR008676" /db_xref="InterPro:IPR016197" /db_xref="UniProtKB/Swiss-Prot:P60762" /translation="MLSVCRINVFPFQLGERVLCFHGPLLYEAKCVKVAIKDKQVKYF IHYSGWNKKSAVRPRRSEKTLKTREDIVALFPVPEGAPSVHHPLLTSSWDEWVPESRV LKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGN GDGGSTSETPQPPRKKRARVDPTVENLFYLPAKKNVDSILEDYANYKKSRGNTDNKEY AVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRI GAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRKAV" assembly_gap 6357497..6358483 /estimated_length=987 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6359997..6361428 /estimated_length=1432 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6373226..6374303 /estimated_length=1078 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6375752..6378240 /estimated_length=2489 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6382404..6383305 /estimated_length=902 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6387848..6388029 /estimated_length=182 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6388030..>6408034 /locus_tag="PAL_GLEAN10009599" mRNA join(<6388030..6388194,6388747..6388912,6389924..6390120, 6391230..6391313,6391655..6391779,6392153..6392302, 6393417..6393560,6397029..6397173,6397672..6397764, 6398090..6398235,6399360..6399529,6399771..6399904, 6400532..6400580,6401216..6401460,6401565..6401706, 6402199..6402325,6402642..6402855,6403125..6404480, 6405097..6405240,6405445..6405615,6405704..6405850, 6406518..6406680,6407877..>6408034) /locus_tag="PAL_GLEAN10009599" /product="A disintegrin and metalloproteinase with thrombospondin motif 7" CDS join(<6388030..6388194,6388747..6388912,6389924..6390120, 6391230..6391313,6391655..6391779,6392153..6392302, 6393417..6393560,6397029..6397173,6397672..6397764, 6398090..6398235,6399360..6399529,6399771..6399904, 6400532..6400580,6401216..6401460,6401565..6401706, 6402199..6402325,6402642..6402855,6403125..6404480, 6405097..6405240,6405445..6405615,6405704..6405850, 6406518..6406680,6407877..6408034) /locus_tag="PAL_GLEAN10009599" /note="GO_component: GO:0005578 - proteinaceous extracellular matrix [Evidence IEA]; GO_component: GO:0031012 - extracellular matrix [Evidence IEA]; GO_function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO_function: GO:0008233 - peptidase activity [Evidence IEA]; GO_function: GO:0008237 - metallopeptidase activity [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_process: GO:0006508 - proteolysis [Evidence IEA]" /codon_start=1 /product="A disintegrin and metalloproteinase with thrombospondin motif 7" /protein_id="ELK18349.1" /db_xref="InterPro:IPR000884" /db_xref="InterPro:IPR001590" /db_xref="InterPro:IPR002870" /db_xref="InterPro:IPR010294" /db_xref="InterPro:IPR010909" /db_xref="InterPro:IPR013273" /db_xref="UniProtKB/Swiss-Prot:Q9UKP4" /translation="NVHLLAPGFVSETRRRGGLGRAHIRTHAPACHLLGEVQDPELEG GLAAISACDGLKGVFQLSNEDYFIEPLEGVPARPGRAQPHVVYKRQAPKRRAEPGDTT APGTCGVQEPLEQEARRERWELRQQRRRPWPRRLHPRSVSREKWVETLVVADAKMVEY HGQPHVESYMLTIMNMVAGLFHDPSIGNPIHITIVRLILLEDEEEDLKITHHADNTLR SFCKWQKSINMKGDSHPLHHDTAILLTRKDLCASTNWPCETLGLSHVAGMCQPHRSCN INEDTGLPLAFTVAHELGHSFGIQHDGSGNDCEPVGKRPSVMSPQLLYDSVPLTWSRC SREYITRFLDRGWGMCLDDTPAKEVIDFPSVLPGVLYDVGHQCRLQYGAYSVFCDGMD NVCHTLWCSVGTTCHSKLDAAVDGTACGESKWCLDGECVAVGFRPEAVDGGWSGWSAW SICSRSCGVGVQSAERQCTQPVPKYKGKYCVGERRRLRLCNLHGCPAGRPSFRHVQCS HFDAMLYKGQLHTWVPVVNDENPCELHCRPSDEYFAEKLRDAVVDGTPCYQGQASHDL CINGICKNVGCDFEIDSGAVEDRWYVDVGLIPAGAREILIEEVAEAANFLALRGEDPD RYFLNGGWTIQWNGDYQVAGTTFTYVRTGDWENLTSPGPTSEPVWIQLLFQESNPGVR YEYTIHREADGPGLGPPPEFSWLHGPWSKCTVTCGTGMQRRSVYCAERQLGPVDEGHC DPLSRPDDRQRKCSEERCPARWWAGEWQLCSSSCGPGGLSRRAVLCVRSVGLDEQSAL EPPACAHLPRPPAETPCNRNVTCPATWAVGNWSQCSVTCGPGTQHRSVLCMNDTSVPC DEAQRPAGEATCPRPPCPRALGELDPEGSGSGSFSHELYNEVDFVPRHLAPRPVRPSP PGPAGDGNAIEGAGPEPEPMFVDDFYYDYNFITFHEDLSYRPFEEPSSDLGATGDWTP PPPSSPAEPPVGTPEPAPEPPGADGERAPRDRSPTSWPGQAGHSLPPPSEQTLGNLLV TRSEDTPMGPPDLGLPGLPWTPASAGGTETTSAPEDQDESLTGVSGPSPPLPPRWERT NEVSEDNEGAPHLPPSSTVSPLSSTSTVHSSPGPDSAQLWTRVTGTWEPALDGGLGPG ARELWPTVGGSPPTPRPTASLPEARDRDGPLEQGTPALPAPGPALLEPQTPAVTGSFL LMTPTGLRHTPGVTALSPAPSGRAESPSPQAPLSSVLLSATAGDSPANSSGAPDTQIP DPGLAEEGSPKDLPPASNATWECSTTCGLGAVWRPVRCSSGREDDCAPAGQKRRGHLR PCATWHAGNWSKCSRSCGGGSSVRDVQCVDRDLRPLRPFHCQAGPAPPPARQPCGAQP CLSWYTSSWRECSEACGGGQQQRLVTCPQPGLCEEALRPSSTRPCNTQPCTQWAVGPW GQCSAPCGGGVQRRLVRCVNTHTGLPEEDGEQCGHEAWPENSRPCGTQDCELTEPPRC VRDRLPFGFCETLRLLGRCQLPTVRTQCCRSCPPPGRTAPSRGHQRASRR" assembly_gap 6390268..6390303 /estimated_length=36 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6400605..6400675 /estimated_length=71 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6412790..>6426266) /locus_tag="PAL_GLEAN10009602" mRNA complement(join(<6412790..6412985,6415607..6415728, 6416106..6416291,6418681..6418798,6420731..6421225, 6423239..6423432,6425023..6425418,6426105..>6426266)) /locus_tag="PAL_GLEAN10009602" /product="TBC1 domain family member 2B" CDS complement(join(6412790..6412985,6415607..6415728, 6416106..6416291,6418681..6418798,6420731..6421225, 6423239..6423432,6425023..6425418,6426105..6426266)) /locus_tag="PAL_GLEAN10009602" /note="GO_component: GO:0005622 - intracellular [Evidence IEA]; GO_function: GO:0005097 - Rab GTPase activator activity [Evidence IEA]; GO_process: GO:0032313 - regulation of Rab GTPase activity [Evidence IEA]" /codon_start=1 /product="TBC1 domain family member 2B" /protein_id="ELK18350.1" /db_xref="InterPro:IPR000195" /db_xref="UniProtKB/Swiss-Prot:Q9UPU7" /translation="MIGSYKNRHSSGDPSTEGTSGSGGAGKPASEVQLQVQSQQEELE RLKKDLSSQKELVRLLQQTVRSSQYDKYFTSSRLCEGVPEDTLELLHHKDDQILGLAS QLERFGLEKESLQQEVRTLKSKVGELNERLGMLMETIQAKDEVIIKLSQQLSDCEGGA SSPTWAPTSPVAAPTGRDQLELDRLKYSSLEAKLCQIESKYLILLQEMKTPVCSEEQG PARDVIAQLLEDALQAEGPEQPEQAFVKPRLVSEYDIYGFRTVPEDDEEEKLVAKVRA LDLKSLHLTESQEVSTGVKWENYFASTVNREMTCSPELKNLVRAGIPHEHRSKVWKWC VDRHARKFRDGAEPGHFQALLQRALEKQNPASKQIELDLLRTLPNNKHYSCPTSEGIQ KLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLEQEDAFWCLVAIVEGFMPRDYYTKT LLGSQVDQRVFRDLVSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIW DSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARRLTAISFG DLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDFLRERDSSPDKGELVSDEEEDT" assembly_gap 6418307..6418542 /estimated_length=236 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6428852..6428900 /estimated_length=49 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6430876..>6456085) /locus_tag="PAL_GLEAN10009604" mRNA complement(join(<6430876..6431062,6431254..6431419, 6439576..6439729,6453710..6453847,6455966..>6456085)) /locus_tag="PAL_GLEAN10009604" /product="TBC1 domain family member 2B" CDS complement(join(6430876..6431062,6431254..6431419, 6439576..6439729,6453710..6453847,6455966..6456085)) /locus_tag="PAL_GLEAN10009604" /codon_start=1 /product="TBC1 domain family member 2B" /protein_id="ELK18351.1" /db_xref="UniProtKB/Swiss-Prot:Q9UPU7" /translation="MSLSELVLSSVELLGREVAPRDTPSSHPPHETQPVLSYSQDALP LGHLDIADACFSYQGPDDAAEPGAEPPAHFEVHSAGAVTVLKAPNRQLMTYWLQELQQ KRWEYCNGLDMVKCDSRAPPTPGDFAKGLVARDSADFTSPHPNPSAEKARNVLAVETA PGELVGEQAASQPAPGHPNSINFSLKQWGTELNRLLWEAGPVLGLLQRQKPAQEKSSS KFTSLPRDRTSFLSLGPSPFSRTPGCPDPTLCVYVG" assembly_gap 6433043..6433140 /estimated_length=98 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6435404..6435418 /estimated_length=15 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6453853..6454315 /estimated_length=463 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6458584..>6464144 /locus_tag="PAL_GLEAN10009605" mRNA join(<6458584..6458759,6459992..6460081,6460625..6460790, 6461024..6461236,6462168..6462821,6464094..>6464144) /locus_tag="PAL_GLEAN10009605" /product="SH2 domain-containing protein 7" CDS join(6458584..6458759,6459992..6460081,6460625..6460790, 6461024..6461236,6462168..6462821,6464094..6464144) /locus_tag="PAL_GLEAN10009605" /note="GO_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="SH2 domain-containing protein 7" /protein_id="ELK18352.1" /db_xref="InterPro:IPR000980" /db_xref="UniProtKB/Swiss-Prot:A6NKC9" /translation="MEGSPRQLSLGRGLEGAADGQALAKLQELALRWFMETQAPLILQ DGALPPWFHGFITRKQTEQLLGDKALGSFLIRLSDRATGYILSYRGGDRCRHFVITQL SNRRYLVSGDTRSHGSLAELVRHYQDVQFEPFGETLAAACPRPEDNDLYDAITLGLRQ PSPGLEKPLATASATEVADRAAGPCPPPKPQVSFLPTRKNPDGRPRNVSGEESMEVPI GVPPLPKRSASLLDESFGGTSNVVYADLRKRNQMRLGRGAEGSGEQGQGPAGSRACSP GKEAPRSPLDGGQSGPALAAGDPGRGPAVSPTSWGLLLPPSSEALGPLAATWSQGSPK LRHRAQPCSQGRCADTYELVQTAAPEEAGDAADQGAYQQIPVHWGGSARPPYPGASLT CRELSRSPDCGYEGTPELPEPRNAYEQIPAAKSRDAGRTQKPDKPRRFFFVDKKHRA" gene complement(<6465366..>6475667) /locus_tag="PAL_GLEAN10009607" mRNA complement(join(<6465366..6465387,6465762..6465957, 6467791..6467938,6469091..6469202,6472955..6472989, 6475617..>6475667)) /locus_tag="PAL_GLEAN10009607" /product="Calcium and integrin-binding family member 2" CDS complement(join(6465366..6465387,6465762..6465957, 6467791..6467938,6469091..6469202,6472955..6472989, 6475617..6475667)) /locus_tag="PAL_GLEAN10009607" /note="GO_function: GO:0005509 - calcium ion binding [Evidence IEA]" /codon_start=1 /product="Calcium and integrin-binding family member 2" /protein_id="ELK18353.1" /db_xref="InterPro:IPR002048" /db_xref="InterPro:IPR018249" /db_xref="UniProtKB/Swiss-Prot:Q568Z7" /translation="MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHARFYELAPNLVPM DYRKSPIVHVPMSLIIQMPELRENPFKERIVEAFSEDGDGNLTFNDFVDMFSVLCESA PRELKANYAFKIYDFNTDNFICKEDLELTLGRLTKSELDEDEVVLVCDKVIEEADLDG DGKLGFADFEDMIAKAPDFLSTFHIRI" assembly_gap 6469004..6469073 /estimated_length=70 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6475721..6477383 /estimated_length=1663 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6479401..>6489514 /locus_tag="PAL_GLEAN10009608" mRNA join(<6479401..6479889,6483326..6483409,6484696..6484810, 6485421..6485608,6486017..6486150,6486804..6486870, 6486960..6487024,6487791..6487875,6488315..6488467, 6489431..>6489514) /locus_tag="PAL_GLEAN10009608" /product="Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial" CDS join(6479401..6479889,6483326..6483409,6484696..6484810, 6485421..6485608,6486017..6486150,6486804..6486870, 6486960..6487024,6487791..6487875,6488315..6488467, 6489431..6489514) /locus_tag="PAL_GLEAN10009608" /note="GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO_function: GO:0051287 - NAD or NADH binding [Evidence IEA]; GO_process: GO:0055114 - oxidation-reduction process [Evidence IEA]" /codon_start=1 /product="Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial" /protein_id="ELK18354.1" /db_xref="InterPro:IPR001804" /db_xref="UniProtKB/Swiss-Prot:Q9D6R2" /translation="MAGPAWMSKVSAGRTGGDRVDRAGRTGRRPCGVWAARAQTAAPE GDGVKVEGGAALLPAAPQAQAQARHRAARSEAGPAPCXXXXXXXXXXXXXXXXXXARG PPALGGQGPVADLRPLPARTRIPAPRAALVAASPPKDTGALHRELPPEPSEREASSSF TSLVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPAEAK ESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYHDVDIV TIRENTEGEYSGIEHVIVDGVVQSIKLITEEASRRIAEFAFEYARNNHRSNVTAVHKA NIMEVAENCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLG VTPSGNIGANGVAIFESVHGTAPDIAGTDMANPTALLLSAVMMLRHMGLVSHAAKIEA ACFATIKDGKSLTKDLGGSAKCSDFTEEICRRVKDLD" assembly_gap 6479644..6479695 /estimated_length=52 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6483003..6483042 /estimated_length=40 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6487935..6488034 /estimated_length=100 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6491636..>6502202) /locus_tag="PAL_GLEAN10009610" mRNA complement(join(<6491636..6491721,6496866..6496929, 6497011..6497225,6498615..6498804,6499230..6499236, 6499455..6499685,6500590..6500771,6501478..6501654, 6501948..6502097,6502185..>6502202)) /locus_tag="PAL_GLEAN10009610" /product="Long-chain-fatty-acid--CoA ligase ACSBG1" CDS complement(join(6491636..6491721,6496866..6496929, 6497011..6497225,6498615..6498804,6499230..6499236, 6499455..6499685,6500590..6500771,6501478..6501654, 6501948..6502097,6502185..6502202)) /locus_tag="PAL_GLEAN10009610" /note="GO_function: GO:0003824 - catalytic activity [Evidence IEA]; GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Long-chain-fatty-acid--CoA ligase ACSBG1" /protein_id="ELK18355.1" /db_xref="InterPro:IPR000873" /db_xref="UniProtKB/Swiss-Prot:Q99PU5" /translation="MANMYTMEEVLELGAQVPEEDLDTVIDMQRPNQCCVLIYTSGTT GPPKGVMLSQDNITWMARYGIQSSSAFHSQAKREATVSYLPLSHITAQMYDLWTGMYW GMKICFAEPNALKGSIVDTLREVEPTIYLAVPRMWEKIMERIQEVMARLGFIRRRMLL WAMSVMLEQNLTCLGSDRKPVKARLVDYLVLAKVRQALGFARCQLCFCGAAPMTVEAE RVFLGLNLRLYSGYGLSEASGSHFVSSPNNYRLYRMEVKLTNQDADGTGKICLWGRDI FMGYLNKEDKTREAIDADGWLHTGDIGRLDAHGFLYITGRLKVLLRLVPGVPAEARSR LSGAWPCLPELIITSGGENVAPKPIEDAVRKELPIVSCAMLIGDQRKFLSMLLTLKVG PPAPGGAVGGTGPGVAESRSPTMKLKRFTVLEKHKAVIDSFYQEHGK" assembly_gap 6493320..6496072 /estimated_length=2753 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6497897..6497941 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6506401..6506544 /estimated_length=144 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6511705..6512693 /estimated_length=989 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6516649..>6521109 /locus_tag="PAL_GLEAN10009611" mRNA join(<6516649..6516883,6518233..6518337,6519209..6519436, 6519550..6519780,6520700..6520800,6520894..>6521109) /locus_tag="PAL_GLEAN10009611" /product="DnaJ like protein subfamily A member 4" CDS join(6516649..6516883,6518233..6518337,6519209..6519436, 6519550..6519780,6520700..6520800,6520894..6521109) /locus_tag="PAL_GLEAN10009611" /note="GO_function: GO:0031072 - heat shock protein binding [Evidence IEA]; GO_function: GO:0051082 - unfolded protein binding [Evidence IEA]; GO_process: GO:0006457 - protein folding [Evidence IEA]" /codon_start=1 /product="DnaJ like protein subfamily A member 4" /protein_id="ELK18356.1" /db_xref="InterPro:IPR001305" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR002939" /db_xref="InterPro:IPR003095" /db_xref="InterPro:IPR008971" /db_xref="UniProtKB/Swiss-Prot:Q8WW22" /translation="MWWVCLTTQLKPALFLFKFKLISQAYEVLSDPKKRDIYDQGGEQ AIKEGGSGSPSFSSPMDIFDMFFGGGGRMARERRGKNVVHQLSVTLEDLYNGVTKKLA LQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQTVCIECKGQGE RIHPKDRCESCSGAKVIREKKIIEVHVERGMKDGQKIVFHGEGDQEPELEAGDVIIVL DQKDHGVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDDRVLVITSKPGEVITHGDLR CVRDEGMPIHKAPLEKGMLIIQFSVIFPEKHWLPAEQLPQLEALLPPRQKVRVTDDMD QVELTEFNANDQNWRQHREAYEEDDDGPRGGVQCQTA" assembly_gap 6532383..6532423 /estimated_length=41 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6536507..6536651 /estimated_length=145 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6538533..6538756 /estimated_length=224 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6540559..6540788 /estimated_length=230 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6546757..6547139 /estimated_length=383 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6547672..>6550612 /locus_tag="PAL_GLEAN10009614" mRNA join(<6547672..6547839,6549637..6549750,6550463..>6550612) /locus_tag="PAL_GLEAN10009614" /product="Cellular retinoic acid-binding protein 1" CDS join(6547672..6547839,6549637..6549750,6550463..6550612) /locus_tag="PAL_GLEAN10009614" /note="GO_function: GO:0005488 - binding [Evidence IEA]" /codon_start=1 /product="Cellular retinoic acid-binding protein 1" /protein_id="ELK18357.1" /db_xref="InterPro:IPR000566" /db_xref="InterPro:IPR011038" /db_xref="UniProtKB/Swiss-Prot:P62966" /translation="MLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEG FEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELANDELILGCSEQTEL SLQLPCPRDQIGDLLSRGTREQQPLLSLEHADIPPILATPP" assembly_gap 6547885..6548160 /estimated_length=276 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6555865..6555920 /estimated_length=56 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6587129..6587176 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6587486..>6620013 /locus_tag="PAL_GLEAN10009615" mRNA join(<6587486..6588048,6591722..6591891,6598112..6598277, 6599589..6599726,6600541..6600756,6603106..6603175, 6603653..6603836,6604607..6604746,6606724..6606895, 6608576..6608676,6610633..6610749,6611769..6611928, 6612648..6612783,6613941..6614025,6614345..6614501, 6614825..6614949,6616291..6616395,6616493..6616635, 6617636..6617783,6617875..6617997,6619026..6619211, 6619903..>6620013) /locus_tag="PAL_GLEAN10009615" /product="Iron-responsive element-binding protein 2" CDS join(6587486..6588048,6591722..6591891,6598112..6598277, 6599589..6599726,6600541..6600756,6603106..6603175, 6603653..6603836,6604607..6604746,6606724..6606895, 6608576..6608676,6610633..6610749,6611769..6611928, 6612648..6612783,6613941..6614025,6614345..6614501, 6614825..6614949,6616291..6616395,6616493..6616635, 6617636..6617783,6617875..6617997,6619026..6619211, 6619903..6620013) /locus_tag="PAL_GLEAN10009615" /note="GO_process: GO:0008152 - metabolic process [Evidence IEA]" /codon_start=1 /product="Iron-responsive element-binding protein 2" /protein_id="ELK18358.1" /db_xref="InterPro:IPR000573" /db_xref="InterPro:IPR001030" /db_xref="InterPro:IPR015928" /db_xref="UniProtKB/Swiss-Prot:B3VKQ2" /translation="MDAPSAGQFPSAARRRGPPALAWSRSAGVRASGSSRFPEPALRA RCTLGPRASRRDPRAVRPPPPEAPLSPQPRWGRGRKKPPFVRDRGGGRGLPQPVVCSA VQPCAPPSPPRPRPAVKADRWSDSARTASCSAGPRPQCAAVSPLKGREKRCGFCKWTV LFSSRPAGLTLSRVLPTHDNESAQKMARLSVLALASVLYQVGAGTLRTVRVMVANSAK LRAYQRCVSGGFHQRQTLFLVSSVFVNVLPYSIRVLLEAAVRNCDGFLMKKEDVMNIL DWKTKQSNVEVPFFPARVLLQDFTGIPAMVDFAAMREAVKTLGGDPKNVHPACPTDLT VDHSLQIDFSKCAIQNAPNPGGGDVQRAARLSPLKAQPRKLPCRGQTACRGSCTSGEG RGPGRAPSQIENTPALCPFHLQPVPEPETVLKNQEVEFGRNRERLQFFKWSSKVFKNV AVIPPGTGTAHQVNLEYLSRVVCEEKGVLFPDSVVGTDSHVTMVNGLGILGWGVGGIE TEAVMLGLPVSLTLPEVVGCELTGSSNPFVTSIDVVLGVTKHLRQVGVAGKFVEFFGS GVSQLSIVDRTTIANMCPEYGATLSFFPVDNVTLKHLEHTGFDKAKLESVETYLKAVK LFRDDQNDSGEPEYSQVIQINLNSIVPSVSGPKRPQDRVAVTDMKNDFRACLNEKVGF RGFQIAAEKQDDAVSLHYEGRDYQLSHGSVVIAAVTSCTNNCNPSVMLAAGLLAKKAV EAGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSRLGFEIVGYGCSTCVGNTAPLSE AVLNAVKQGDLVTCGVLSGNKNFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFQTE PLGTDPAGKNIYLHDIWPSREEVHQIEEEHVILSMFKALKEKIEMGNKRWSCLEAPDS VLFPWDLKSTYIRCPSFFDKLTKEPAALQPIENAHVLLHLGDCVTTDHISPAGSIARS SAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFIGKPAPKTIHFPSG QTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHK DHLIGMGVAPLQFLPGQSTGSLGLSGRETFSLAFPEELSPGVTLNIKTSTGKVFSVIA SFENDVEVTLYKHGGLLNFVARKFS" gene <6629080..>6637410 /locus_tag="PAL_GLEAN10009616" mRNA join(<6629080..6629425,6630457..6630596,6633974..6634157, 6636950..>6637410) /locus_tag="PAL_GLEAN10009616" /product="Aminoglycoside phosphotransferase domain-containing protein 1" CDS join(6629080..6629425,6630457..6630596,6633974..6634157, 6636950..6637410) /locus_tag="PAL_GLEAN10009616" /codon_start=1 /product="Aminoglycoside phosphotransferase domain-containing protein 1" /protein_id="ELK18359.1" /db_xref="InterPro:IPR002575" /db_xref="InterPro:IPR011009" /db_xref="UniProtKB/Swiss-Prot:A5PJU6" /translation="MLSGDDQRSRAFAKPAFSEAQACALVESVFGFKVSKIRPLPSYD DQNFHICISRAKDTADGPTEYVLKINNTESSKTPDLIEVQSCIIMFLRAAGFPTASVC RTKGDNITSLVSVDSGSEIKSYLVRLLTYLPGRPIAEVPMGPQLLFEIGRLAAKLDKT LEKFHHPQLSSLHREDFIWNLKNVPLLEKYLHALGQNRNREIVEQVIQRYRDEVMTKL SQFRECINHGDLNDHNILIEPSESACGDATYRVSGVVDFDDMSYGYYVFEVAITIMYM MVESKTPVQVGGHVLAGFESIVPLTPVERGALFLLVCSRFCQSLVMAAYSCQLHPENE EYLMITAKTGWKHLQQMFDTGQKAVEEIWFDTAKSYESGISM" assembly_gap 6638229..6638430 /estimated_length=202 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6639541..>6644162 /locus_tag="PAL_GLEAN10009617" mRNA join(<6639541..6639664,6639923..6640085,6641216..6641293, 6641610..6641698,6642153..6642283,6642781..6642904, 6644008..>6644162) /locus_tag="PAL_GLEAN10009617" /product="Proteasome subunit alpha type-4" CDS join(6639541..6639664,6639923..6640085,6641216..6641293, 6641610..6641698,6642153..6642283,6642781..6642904, 6644008..6644162) /locus_tag="PAL_GLEAN10009617" /note="GO_component: GO:0005839 - proteasome core complex [Evidence IEA]; GO_component: GO:0019773 - proteasome core complex, alpha-subunit complex [Evidence IEA]; GO_function: GO:0004175 - endopeptidase activity [Evidence IEA]; GO_function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]; GO_process: GO:0006511 - ubiquitin-dependent protein catabolic process [Evidence IEA]; GO_process: GO:0051603 - proteolysis involved in cellular protein catabolic process [Evidence IEA]" /codon_start=1 /product="Proteasome subunit alpha type-4" /protein_id="ELK18360.1" /db_xref="InterPro:IPR000426" /db_xref="InterPro:IPR001353" /db_xref="UniProtKB/Swiss-Prot:P25789" /translation="MCFRRCFGVSRELLSAHRNHSYVFPLQSRRYDSRTTIFSPEGRL YQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSV AGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSL LYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALAL AIKVLNKTMDVSKLSAEKVEIATLTRESGKTVIRVLKQKEVEQLIQKHEEEEAKAERE KKEKEQKEKDK" assembly_gap 6650346..6650379 /estimated_length=34 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6653694..6654656 /estimated_length=963 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6662757..>6664793 /locus_tag="PAL_GLEAN10009619" mRNA join(<6662757..6662909,6664016..6664060,6664785..>6664793) /locus_tag="PAL_GLEAN10009619" /product="Neuronal acetylcholine receptor subunit alpha-5" CDS join(<6662757..6662909,6664016..6664060,6664785..6664793) /locus_tag="PAL_GLEAN10009619" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]" /codon_start=1 /product="Neuronal acetylcholine receptor subunit alpha-5" /protein_id="ELK18361.1" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:Q8SPU7" /translation="GLAEPSFLAKHEDTLLKDLLRDYEKWVRPVEYLNDKIKIKFGLA ISQLVDVDEKNQLMTTNVWLKQYP" gene <6665014..>6668849 /locus_tag="PAL_GLEAN10009620" mRNA join(<6665014..6665181,6665292..6665401,6666927..6667758, 6668688..>6668849) /locus_tag="PAL_GLEAN10009620" /product="Neuronal acetylcholine receptor subunit alpha-5" CDS join(6665014..6665181,6665292..6665401,6666927..6667758, 6668688..6668849) /locus_tag="PAL_GLEAN10009620" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_component: GO:0045211 - postsynaptic membrane [Evidence IEA]; GO_function: GO:0004889 - nicotinic acetylcholine-activated cation-selective channel activity [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]" /codon_start=1 /product="Neuronal acetylcholine receptor subunit alpha-5" /protein_id="ELK18362.1" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:P30532" /translation="MRGLDARDCNSWAQSVVGEGMLGRATRTRPGPHHALRGPWLEQC TRTGLLRGHKEDEWKDVKLRWNPDDYGGIKVIRVPSDSLWTPDIVLFDNADGRFEGAS TKTVVRYDGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQ DVDKRDFFDNGEWEIVSATGCKGNRTDSCCWYPYITYSFVIRRLPLFYTLFLIIPCIG LSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTM IFVTLSIMVTVFAINIHHRSPSTHNAMAPWVRRIFLHKLPKLLCMRSHVDRYFTQKEE TECSSGPEPSRNILEAALDSIRYITRHVTKENAVREVVEDWKFIAQVLDRLFLWTFLL VSIVGSLGLFVPVIYKWANIIVPIHIGNANK" gene complement(<6672212..>6696061) /locus_tag="PAL_GLEAN10009621" mRNA complement(join(<6672212..6672340,6674958..6675969, 6679942..6680051,6681106..6681150,6681232..6681404, 6685855..6685987,6689076..6690045,6690698..6690807, 6690909..6690953,6692727..6692875,6696007..>6696061)) /locus_tag="PAL_GLEAN10009621" /product="Neuronal acetylcholine receptor subunit alpha-3" CDS complement(join(6672212..6672340,6674958..6675969, 6679942..6680051,6681106..6681150,6681232..6681404, 6685855..6685987,6689076..6690045,6690698..6690807, 6690909..6690953,6692727..6692875,6696007..6696061)) /locus_tag="PAL_GLEAN10009621" /note="GO_component: GO:0016020 - membrane [Evidence IEA]; GO_component: GO:0016021 - integral to membrane [Evidence IEA]; GO_component: GO:0045211 - postsynaptic membrane [Evidence IEA]; GO_function: GO:0004889 - nicotinic acetylcholine-activated cation-selective channel activity [Evidence IEA]; GO_function: GO:0005216 - ion channel activity [Evidence IEA]; GO_function: GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO_process: GO:0006810 - transport [Evidence IEA]; GO_process: GO:0006811 - ion transport [Evidence IEA]" /codon_start=1 /product="Neuronal acetylcholine receptor subunit alpha-3" /protein_id="ELK18363.1" /db_xref="InterPro:IPR002394" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR006202" /db_xref="UniProtKB/Swiss-Prot:Q07263" /translation="MRSAHPLVLFSLAALCGRGDCRVANAEEKLMDDLLNKTRYNNLI RPATSSLQLISIELQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLAWNSSCYEGVDI LRIPAKRIWLPDIVLYNNADGTYEVSLYTNVVVRSNGSILWLPPAIYKSACKIEVKHF PFDQQNCTLKFRSWTYDHTEIDMVLKSPSASMDDFTPSGEWDIVALPGRRTVNPKDPS YVDVTYDFVIRRKPLFYTINLIVPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTV FLLLISKIVPPTSLDVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVR RCFLRRLPTFLFMKRPDGSAPRTPQPSQSGAATASATGPASSSNLYGSSMYFVNPASA AAKPPAGSDSARTPRDFRLRSSGRFQQDVQEALQGVNFIAQHMKSDDQDQSVVEDWKY VAMVVDRLFLWVFVVVCVLGTVGLFLPPLFQTHAPSEVASGSEAEHRLFERLFEDYNE IIRPVANVSDPVIIQFEVSMSQLVKVVSVGATSRGHGDEVNQIMETNLWLKQIWNDYK LKWNPSDYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPA IFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSVNLKDYWESGEWAIIR APGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTVNLIIPCLLISCLTVLVFYLPSDC GEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLN VHYRTPTTHTMPTWVKTVFLNLLPRIMFMTRPASSEGDGQRPRPLHSAELASLSCFGR TEPKGCKEGHPCQDGTCGHCHHRRVKISNFSANLTRSSSSESVDAMLSLSTLSPEIKE AIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLMA RDDA" assembly_gap 6676974..6676983 /estimated_length=10 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6682793..6682834 /estimated_length=42 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6696070..6696108 /estimated_length=39 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6701770..6702134 /estimated_length=365 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6721118..6721165 /estimated_length=48 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6722021..6722058 /estimated_length=38 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6724357..6725323 /estimated_length=967 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6733432..>6762150 /locus_tag="PAL_GLEAN10009622" mRNA join(<6733432..6733533,6737749..6737853,6744218..6744274, 6746336..6746476,6749018..6749102,6750369..6750429, 6751157..6751247,6754698..6754756,6758986..6759034, 6759487..6759582,6762046..>6762150) /locus_tag="PAL_GLEAN10009622" /product="Ubiquitin-conjugating enzyme E2 Q2" CDS join(<6733432..6733533,6737749..6737853,6744218..6744274, 6746336..6746476,6749018..6749102,6750369..6750429, 6751157..6751247,6754698..6754756,6758986..6759034, 6759487..6759582,6762046..6762150) /locus_tag="PAL_GLEAN10009622" /note="GO_function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO_process: GO:0043687 - post-translational protein modification [Evidence IEA]" /codon_start=1 /product="Ubiquitin-conjugating enzyme E2 Q2" /protein_id="ELK18364.1" /db_xref="InterPro:IPR000608" /db_xref="InterPro:IPR016135" /db_xref="UniProtKB/Swiss-Prot:Q7YQJ9" /translation="ESYPSSSPIWFVDSDDPNLTSVLERLEDTEINNSLRQQLKWLIC ELCRLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEMAEDIEDLDHYEMKEEE PISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQS YKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP FDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV QFGANKNQYNLARAQQSYNSIVQIHEKNGTFNSICIYCYL" assembly_gap 6767942..6768356 /estimated_length=415 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6787385..6787675 /estimated_length=291 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6805348..>6846126 /locus_tag="PAL_GLEAN10009626" mRNA join(<6805348..6805361,6807097..6807279,6816429..6816583, 6819213..6819286,6822784..6822840,6823724..6823862, 6827329..6827513,6837138..6837309,6845573..>6846126) /locus_tag="PAL_GLEAN10009626" /product="hypothetical protein" CDS join(6805348..6805361,6807097..6807279,6816429..6816583, 6819213..6819286,6822784..6822840,6823724..6823862, 6827329..6827513,6837138..6837309,6845573..6846126) /locus_tag="PAL_GLEAN10009626" /codon_start=1 /product="hypothetical protein" /protein_id="ELK18365.1" /db_xref="UniProtKB/Swiss-Prot:Q2M3C6" /translation="MSSAQPAAEGRASDVEILSQHVDEGRSFNPGPLVPFAYRDLPLA AADLSAAGSQLLSNLDEDCQEGSAWLQPCCGKRAAAWQVFLLSASVNSLLVACVVLVV TLLTLELLIDVKLLQFSSAFQFAGVIHWISLAILSVFFSETVLRIVVLGIWDYIENKI EVFDGAVIILSVAPMVASTVANGPRSPWDAISLIIMLRIWRVKRVIDAYVLPVKVEME MAIQQYEKAKVIQDEQLERLTQICQEQGVRRDNSGSVHFCPGLRKLVVPNEFEIRQLR AHLAQQGLDLAAEREAALLAPQVRGRPHSRYHAVEETATEGLVEGLRPSPDSGAPEPA MCVVTTAAIDVHQPNVSSDLFSVDVPLKLGSSGTHVSTSESASHSARSSVTRAQSDSS QTLCSSADYSTTREEPSLEPSLSPLPPSPQQQVLLSSLSEDPCPSQKDSGPVPFGSPS RLCPQQSRMGAKGRSVPAGESGRLHSLSDGACHPLPVCCTHAVGEVHIFGIQRADTAP GP" gene complement(<6858014..>6910108) /locus_tag="PAL_GLEAN10009628" mRNA complement(join(<6858014..6858118,6858507..6858587, 6864919..6864984,6882891..6882973,6885512..6885580, 6886733..6886834,6887435..6887545,6888108..6888207, 6894242..6894324,6894427..6894508,6900492..6900638, 6902091..6902180,6910070..>6910108)) /locus_tag="PAL_GLEAN10009628" /product="Electron transfer flavoprotein subunit alpha, mitochondrial" CDS complement(join(6858014..6858118,6858507..6858587, 6864919..6864984,6882891..6882973,6885512..6885580, 6886733..6886834,6887435..6887545,6888108..6888207, 6894242..6894324,6894427..6894508,6900492..6900638, 6902091..6902180,6910070..6910108)) /locus_tag="PAL_GLEAN10009628" /codon_start=1 /product="Electron transfer flavoprotein subunit alpha, mitochondrial" /protein_id="ELK18366.1" /db_xref="InterPro:IPR014730" /db_xref="InterPro:IPR014731" /db_xref="UniProtKB/Swiss-Prot:P13804" /translation="MLRAAAPKRLRRAVGVALQAFLPTAVSGPQVWDCGPEGWGRGEA SWLRFQSTLVIAEHGNDTLAPITLNTITAAKRLGGEVSCLIAGTKCDKVAQDLCKVAG VAKVLVAQHDAYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRIAAKLDVA PVSDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFEAAATSGGSASSEKA SDTSPVGLSEWLDQKLTKSDRPELTGAQVVVSGGRGLKSGENFKLLYDLADQLHAAVG ASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPE APIFQVADYGIVADLFKEVWLRPSPSSPMCQPMCSCVHVESTAGSGEVHAP" assembly_gap 6878276..6878641 /estimated_length=366 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6895970..6899248 /estimated_length=3279 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6909753..6909866 /estimated_length=114 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6917932..6917966 /estimated_length=35 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene <6920869..>6925705 /locus_tag="PAL_GLEAN10009629" mRNA join(<6920869..6920938,6922529..6922718,6922840..6923099, 6924367..6924650,6925589..>6925705) /locus_tag="PAL_GLEAN10009629" /product="Insulin protein enhancer protein ISL-2" CDS join(6920869..6920938,6922529..6922718,6922840..6923099, 6924367..6924650,6925589..6925705) /locus_tag="PAL_GLEAN10009629" /note="GO_function: GO:0003700 - sequence-specific DNA binding transcription factor activity [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]; GO_function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO_process: GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]" /codon_start=1 /product="Insulin protein enhancer protein ISL-2" /protein_id="ELK18367.1" /db_xref="InterPro:IPR001356" /db_xref="InterPro:IPR001781" /db_xref="InterPro:IPR009057" /db_xref="UniProtKB/Swiss-Prot:Q9CXV0" /translation="MQKRMKRIDVNPPPANVQVDAGTEKPGTATCVGCGSQIHDQFIL RVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGIKCAKCQVGFSS SDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADHGLLLERAAATSPS SPGPLPARGLHLPDPGAGRQPAPRPHAHKQAEKTTRVRTVLNEKQLHTLRTCYAANPR PDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKTVSFSESGS LGNSSGSDVTSLSSQLPDTPNSMVPSPAET" assembly_gap 6926290..6926737 /estimated_length=448 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<6930721..>6974581) /locus_tag="PAL_GLEAN10009630" mRNA complement(join(<6930721..6930821,6933054..6933105, 6935398..6935589,6948877..6949026,6949138..6949203, 6952529..6952766,6963585..6963740,6967133..6967365, 6973968..6974091,6974358..>6974581)) /locus_tag="PAL_GLEAN10009630" /product="S phase cyclin A-associated protein in the endoplasmic reticulum" CDS complement(join(6930721..6930821,6933054..6933105, 6935398..6935589,6948877..6949026,6949138..6949203, 6952529..6952766,6963585..6963740,6967133..6967365, 6973968..6974091,6974358..6974581)) /locus_tag="PAL_GLEAN10009630" /codon_start=1 /product="S phase cyclin A-associated protein in the endoplasmic reticulum" /protein_id="ELK18368.1" /db_xref="UniProtKB/Swiss-Prot:Q9BY12" /translation="MVPQPGSSPPEPWARASIGGLQLLLTGPVPHLPSPAPGDLAAGA LTDTFLGTIQRLLDPGVPRQCLILDYEDVVRSLCSAVNVYNLTCNNCSETCTDVLFSN KITFLMDLLIHQLTVYVPDENNAILGRNANKQVFEGLTTGLLKVSAVVLGCLMANRPN GSSRPALPKIAAQDMKNKPSQGDAFNSRVQDLISYVVNVGLVDKLCGCFLSVQGPVDE DPRVAVLLQHAAGLLQAACSLCFAVTGRSYSIFDSNRQDPTGLTAALQATDLAGVLHM LYCVLFHGAISDPSATSPKETYSQNTVQVATQSLRFLNSFAALDLPAFQVKRCMCYSP LLAPASPSGGGRSSIVGAEGLSLAFRHIASSLLGHCSQVSCESLLHEVIVCVGYFTVN HPDNQVVVQSGRHPTVLQQLCQLPFQYFSDPRLIKVLFPSLIAACHNNRQNRIILEQE MSCVLLATFIQDFAQTPGQADNQSYQPKGRCLCSQDYLELANRFPQQAWEEARQFFLQ KEK" assembly_gap 6932497..6932541 /estimated_length=45 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6961654..6961733 /estimated_length=80 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 6971768..6971814 /estimated_length=47 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7013534..7013563 /estimated_length=30 /gap_type="within scaffold" /linkage_evidence="paired-ends" gene complement(<7028668..>7129037) /locus_tag="PAL_GLEAN10009631" mRNA complement(join(<7028668..7028737,7031596..7031732, 7048231..7048338,7048854..7049006,7050373..7050454, 7053240..7053382,7061176..7061316,7063543..7063654, 7063929..7064046,7064234..7064309,7065173..7065343, 7068289..7068525,7071310..7071566,7077891..7077892, 7081762..7081926,7085993..7086109,7089642..7089742, 7094779..7094976,7101178..7101248,7128324..7128580, 7128928..>7129037)) /locus_tag="PAL_GLEAN10009631" /product="S phase cyclin A-associated protein in the endoplasmic reticulum" CDS complement(join(7028668..7028737,7031596..7031732, 7048231..7048338,7048854..7049006,7050373..7050454, 7053240..7053382,7061176..7061316,7063543..7063654, 7063929..7064046,7064234..7064309,7065173..7065343, 7068289..7068525,7071310..7071566,7077891..7077892, 7081762..7081926,7085993..7086109,7089642..7089742, 7094779..7094976,7101178..7101248,7128324..7128580, 7128928..7129037)) /locus_tag="PAL_GLEAN10009631" /note="GO_function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO_function: GO:0008270 - zinc ion binding [Evidence IEA]" /codon_start=1 /product="S phase cyclin A-associated protein in the endoplasmic reticulum" /protein_id="ELK18369.1" /db_xref="InterPro:IPR003604" /db_xref="UniProtKB/Swiss-Prot:Q9BY12" /translation="MTTAALNEMPLIVTHLSAAIDSNSAPSKHRVSPFCPWSGILCQV RSRKPHKGERSGTDCGVSALSYVEKRMCRLVKAAASNCDPLNKKPHLPCLKHPEHKAT VLDANARQQTSTPMFGLVFKGKSKCQTGGKSKRTIQGTHKTTKQNTSVDCKITSSTTG EKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMML DNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGRHVIPSPSTDRITVTS NARRSLNFGGSPGTVAAPRLAPTGVSWADKVKAHHTGSTAPADVAPAQSCPPMTVQKT SGKNGKQWKDAEGWETVQRGRPVRSRSAAVMPKVSTEALKSRDDSDKENVQVLPDEGL QKGEFVGDGSSNTLEAQLKDSLHSYDHPLAERTQFTASTLDDVKNSGSSTLQDSSVRT SEIHPVHVDAECVSFPQQAGTSPSHTNEDRFSAEKARVESEMDSSDISNVSAANLSMA EVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSASMG SGSVFFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSSPS RKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRM MEEKLLHAEFKREVQLQAIVKKAQEEEAKERKRALEAERQARVEELLMKRKEQEARIE QQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQI EQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLISSEVYLFSHIKGKKHQQA VRENSSIQGRELSDEEVEHLSLKKYIIDIVIESTAPSEPSKDGEERQRNKKKAKKIKA RMNSRAKEYESLMETKNSGSDSPYKAK" assembly_gap 7030171..7030459 /estimated_length=289 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7086184..7086241 /estimated_length=58 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7089150..7089181 /estimated_length=32 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7108155..7108167 /estimated_length=13 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7111788..7112139 /estimated_length=352 /gap_type="within scaffold" /linkage_evidence="paired-ends" assembly_gap 7118800..7119302 /estimated_length=503 /gap_type="within scaffold" /linkage_evidence="paired-ends" CONTIG join(ALWS01005940.1:1..4983,gap(271),ALWS01005941.1:1..6055, gap(299),ALWS01005942.1:1..39618,gap(85),ALWS01005943.1:1..22313, gap(566),ALWS01005944.1:1..30709,gap(1608),ALWS01005945.1:1..56326, gap(63),ALWS01005946.1:1..3113,gap(22),ALWS01005947.1:1..58266, gap(974),ALWS01005948.1:1..25915,gap(96),ALWS01005949.1:1..28137, gap(79),ALWS01005950.1:1..84949,gap(64),ALWS01005951.1:1..22904, gap(199),ALWS01005952.1:1..3660,gap(62),ALWS01005953.1:1..11583, gap(20),ALWS01005954.1:1..16806,gap(22),ALWS01005955.1:1..4500, gap(18),ALWS01005956.1:1..1912,gap(15),ALWS01005957.1:1..15436, gap(273),ALWS01005958.1:1..8479,gap(47),ALWS01005959.1:1..2219, gap(46),ALWS01005960.1:1..12411,gap(77),ALWS01005961.1:1..14135, gap(37),ALWS01005962.1:1..52070,gap(27),ALWS01005963.1:1..28572, gap(371),ALWS01005964.1:1..19949,gap(45),ALWS01005965.1:1..30107, gap(32),ALWS01005966.1:1..8701,gap(211),ALWS01005967.1:1..68434, gap(26),ALWS01005968.1:1..50595,gap(24),ALWS01005969.1:1..6390, gap(701),ALWS01005970.1:1..6783,gap(474),ALWS01005971.1:1..56256, gap(14),ALWS01005972.1:1..3378,gap(84),ALWS01005973.1:1..48732, gap(101),ALWS01005974.1:1..11741,gap(129),ALWS01005975.1:1..247, gap(960),ALWS01005976.1:1..7524,gap(44),ALWS01005977.1:1..11579, gap(1101),ALWS01005978.1:1..2185,gap(476),ALWS01005979.1:1..12327, gap(1154),ALWS01005980.1:1..1802,gap(71),ALWS01005981.1:1..3886, gap(44),ALWS01005982.1:1..25588,gap(56),ALWS01005983.1:1..2455, gap(22),ALWS01005984.1:1..22996,gap(36),ALWS01005985.1:1..1590, gap(195),ALWS01005986.1:1..13433,gap(16),ALWS01005987.1:1..5745, gap(1097),ALWS01005988.1:1..32569,gap(47),ALWS01005989.1:1..26196, gap(194),ALWS01005990.1:1..8089,gap(386),ALWS01005991.1:1..1440, gap(18),ALWS01005992.1:1..7273,gap(171),ALWS01005993.1:1..3581, gap(196),ALWS01005994.1:1..12686,gap(10),ALWS01005995.1:1..2805, gap(66),ALWS01005996.1:1..7037,gap(91),ALWS01005997.1:1..11391, gap(36),ALWS01005998.1:1..20103,gap(1810),ALWS01005999.1:1..11564, gap(31),ALWS01006000.1:1..26177,gap(23),ALWS01006001.1:1..37112, gap(392),ALWS01006002.1:1..2031,gap(2630),ALWS01006003.1:1..14376, gap(2736),ALWS01006004.1:1..15938,gap(19),ALWS01006005.1:1..6129, gap(182),ALWS01006006.1:1..13474,gap(20),ALWS01006007.1:1..20345, gap(895),ALWS01006008.1:1..1475,gap(33),ALWS01006009.1:1..9779, gap(89),ALWS01006010.1:1..4889,gap(46),ALWS01006011.1:1..7617, gap(37),ALWS01006012.1:1..66704,gap(45),ALWS01006013.1:1..36768, gap(905),ALWS01006014.1:1..33165,gap(24),ALWS01006015.1:1..27818, gap(16),ALWS01006016.1:1..12441,gap(154),ALWS01006017.1:1..10692, gap(37),ALWS01006018.1:1..7692,gap(48),ALWS01006019.1:1..413, gap(45),ALWS01006020.1:1..2081,gap(672),ALWS01006021.1:1..7673, gap(58),ALWS01006022.1:1..19890,gap(170),ALWS01006023.1:1..3559, gap(52),ALWS01006024.1:1..21002,gap(387),ALWS01006025.1:1..957, gap(1009),ALWS01006026.1:1..55045,gap(563),ALWS01006027.1:1..11886, gap(38),ALWS01006028.1:1..22085,gap(31),ALWS01006029.1:1..786, gap(126),ALWS01006030.1:1..2413,gap(237),ALWS01006031.1:1..6296, gap(48),ALWS01006032.1:1..7629,gap(42),ALWS01006033.1:1..1167, gap(28),ALWS01006034.1:1..12519,gap(366),ALWS01006035.1:1..18697, gap(1974),ALWS01006036.1:1..1954,gap(10),ALWS01006037.1:1..2360, gap(31),ALWS01006038.1:1..24261,gap(964),ALWS01006039.1:1..18401, gap(21),ALWS01006040.1:1..16117,gap(121),ALWS01006041.1:1..10528, gap(16),ALWS01006042.1:1..38219,gap(33),ALWS01006043.1:1..51748, gap(17),ALWS01006044.1:1..12257,gap(748),ALWS01006045.1:1..4419, gap(2298),ALWS01006046.1:1..36719,gap(55),ALWS01006047.1:1..1699, gap(1552),ALWS01006048.1:1..16135,gap(684),ALWS01006049.1:1..1322, gap(109),ALWS01006050.1:1..20132,gap(27),ALWS01006051.1:1..4785, gap(80),ALWS01006052.1:1..12225,gap(127),ALWS01006053.1:1..19797, gap(171),ALWS01006054.1:1..13967,gap(336),ALWS01006055.1:1..12520, gap(199),ALWS01006056.1:1..16374,gap(38),ALWS01006057.1:1..34430, gap(33),ALWS01006058.1:1..1791,gap(531),ALWS01006059.1:1..7173, gap(366),ALWS01006060.1:1..1539,gap(32),ALWS01006061.1:1..43802, gap(28),ALWS01006062.1:1..7443,gap(75),ALWS01006063.1:1..7558, gap(32),ALWS01006064.1:1..18100,gap(55),ALWS01006065.1:1..73976, gap(63),ALWS01006066.1:1..12841,gap(209),ALWS01006067.1:1..5569, gap(24),ALWS01006068.1:1..1186,gap(63),ALWS01006069.1:1..1258, gap(14),ALWS01006070.1:1..3533,gap(38),ALWS01006071.1:1..18647, gap(43),ALWS01006072.1:1..11820,gap(868),ALWS01006073.1:1..19552, gap(296),ALWS01006074.1:1..364,gap(95),ALWS01006075.1:1..7623, gap(59),ALWS01006076.1:1..17774,gap(30),ALWS01006077.1:1..8402, gap(30),ALWS01006078.1:1..6033,gap(42),ALWS01006079.1:1..12249, gap(119),ALWS01006080.1:1..21407,gap(58),ALWS01006081.1:1..38480, gap(67),ALWS01006082.1:1..21713,gap(45),ALWS01006083.1:1..35408, gap(411),ALWS01006084.1:1..10472,gap(20),ALWS01006085.1:1..18933, gap(42),ALWS01006086.1:1..956,gap(14),ALWS01006087.1:1..16497, gap(41),ALWS01006088.1:1..6719,gap(716),ALWS01006089.1:1..20430, gap(36),ALWS01006090.1:1..26035,gap(112),ALWS01006091.1:1..75314, gap(3183),ALWS01006092.1:1..3510,gap(37),ALWS01006093.1:1..4621, gap(1049),ALWS01006094.1:1..17150,gap(102),ALWS01006095.1:1..727, gap(351),ALWS01006096.1:1..4392,gap(2748),ALWS01006097.1:1..6943, gap(54),ALWS01006098.1:1..11695,gap(47),ALWS01006099.1:1..43357, gap(529),ALWS01006100.1:1..4050,gap(120),ALWS01006101.1:1..7804, gap(298),ALWS01006102.1:1..64945,gap(15),ALWS01006103.1:1..4702, gap(37),ALWS01006104.1:1..19954,gap(11),ALWS01006105.1:1..15361, gap(223),ALWS01006106.1:1..3919,gap(36),ALWS01006107.1:1..4314, gap(35),ALWS01006108.1:1..27850,gap(34),ALWS01006109.1:1..7254, gap(68),ALWS01006110.1:1..10336,gap(72),ALWS01006111.1:1..16310, gap(1149),ALWS01006112.1:1..10212,gap(34),ALWS01006113.1:1..2282, gap(17),ALWS01006114.1:1..1358,gap(36),ALWS01006115.1:1..3756, gap(47),ALWS01006116.1:1..2780,gap(181),ALWS01006117.1:1..25351, gap(12),ALWS01006118.1:1..19937,gap(61),ALWS01006119.1:1..2618, gap(126),ALWS01006120.1:1..30474,gap(703),ALWS01006121.1:1..4596, gap(161),ALWS01006122.1:1..9513,gap(864),ALWS01006123.1:1..7827, gap(445),ALWS01006124.1:1..5873,gap(2035),ALWS01006125.1:1..16521, gap(299),ALWS01006126.1:1..6532,gap(115),ALWS01006127.1:1..30397, gap(216),ALWS01006128.1:1..6426,gap(26),ALWS01006129.1:1..17669, gap(554),ALWS01006130.1:1..9095,gap(81),ALWS01006131.1:1..5649, gap(324),ALWS01006132.1:1..19854,gap(54),ALWS01006133.1:1..10821, gap(32),ALWS01006134.1:1..2582,gap(11),ALWS01006135.1:1..34542, gap(22),ALWS01006136.1:1..23899,gap(105),ALWS01006137.1:1..22976, gap(225),ALWS01006138.1:1..2171,gap(395),ALWS01006139.1:1..16762, gap(814),ALWS01006140.1:1..22342,gap(26),ALWS01006141.1:1..2339, gap(129),ALWS01006142.1:1..22596,gap(298),ALWS01006143.1:1..6835, gap(39),ALWS01006144.1:1..20446,gap(11),ALWS01006145.1:1..16157, gap(16),ALWS01006146.1:1..1590,gap(35),ALWS01006147.1:1..3303, gap(488),ALWS01006148.1:1..2137,gap(26),ALWS01006149.1:1..7259, gap(314),ALWS01006150.1:1..3037,gap(46),ALWS01006151.1:1..769, gap(906),ALWS01006152.1:1..10441,gap(482),ALWS01006153.1:1..34731, gap(34),ALWS01006154.1:1..27692,gap(837),ALWS01006155.1:1..6081, gap(805),ALWS01006156.1:1..2333,gap(13172),ALWS01006157.1:1..4623, gap(51),ALWS01006158.1:1..11057,gap(2212),ALWS01006159.1:1..1881, gap(355),ALWS01006160.1:1..528,gap(8292),ALWS01006161.1:1..23299, gap(551),ALWS01006162.1:1..13202,gap(22),ALWS01006163.1:1..5780, 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