LOCUS JX993585 5067 bp mRNA linear VRT 14-MAR-2013 DEFINITION Xenopus (Silurana) tropicalis Nup153 mRNA, complete cds. ACCESSION JX993585 VERSION JX993585.1 KEYWORDS . SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE 1 (bases 1 to 5067) AUTHORS Labokha,A.A., Gradmann,S., Frey,S., Hulsmann,B.B., Urlaub,H., Baldus,M. and Gorlich,D. TITLE Systematic analysis of barrier-forming FG hydrogels from Xenopus nuclear pore complexes JOURNAL EMBO J. 32 (2), 204-218 (2013) PUBMED 23202855 REFERENCE 2 (bases 1 to 5067) AUTHORS Hulsmann,B.B. and Gorlich,D. TITLE Direct Submission JOURNAL Submitted (22-OCT-2012) Department of Cellular Logistics, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, Gottingen 37077, Germany FEATURES Location/Qualifiers source 1..5067 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" CDS 220..4863 /codon_start=1 /product="Nup153" /protein_id="AFZ61877.1" /translation="MAAAGGGGGAGESGTGGKIRSRRYHLSSGRTPYSKSRQRQGIIS RVTDAVKSIVPGWLQNYFNKQEEERGRAHNASELIVEDTEGRQNNTEHHIYVDDEGNS ASGRVTPEPIINVDEEVPSTSQSAINDTDALTRPSLHRANLNFNLFDSPAMNCQPTTS TFPIGTSGFSLVKEIKDSTSQHDDDNISTTSGFSSRASDKDMAVSKNVGVPPLWSPEV DRSQSLSHNSSMTSKKPTFNLSAFSSLSPSLGNASFVNSQLGDSPFYPGKTTYQGAAA VRSSRVRSNPYQAPLRRQVKAKPANAQQYGVTSSTARRILQSLEKMSSPLADAKRIPS NSLSHTPEKSLMDIAENPSKRKKVESPFPPVQKLVTPKSISVSTNRSLYIKPSLTPSA VSNTSSRRVQPDKHNESRENNVQTVQSTSHSFSYPKFSTPTSNELLSRGGGKMMRQKG SHYSTKPAEETSGLTSSSPLFTFSSPIVKSTESNAQSPGSSVDFTFSVPTVKVSSATT SIDSKVSAVSTTAKTHIAVNNSSAKDSDEQVGFCKPAKTLKEGSVLDILRSPGFSSSP SQQTSASTPNRSTSTFSKTVGNAFSPVKVTLGVGGKQALGLWQCSACCHENMASDSNC TACCAAKPQPAETNKKLPASPQHSNTKTTVPLSSVQGLGDKFKLPAGTWDCDTCLVQN KAEVTKCVACETPKPGTGMKANLLLPPATKALNSAPTPSAFVSSSGSITNEEKPEGSW DCTGCRMQNKTENNTCVACKADKPGAIKSLSTAAPSGLLGLLDHFKKPAGSWDCDVCL IQNKPEATKCVACESAKPGTKPELKGTFGTVQTSAAPVSLGLGLLDQFKKSAGSWDCE VCLVENKPEANKCIACESAKPGTKAELKGFGTSTLSAGTTAPTFKFGVQPSDSAGELK SGASTDSTSGFSFAKPIGDFKFGLASASATTEETGKKSFTFGTSTSNQASAGFKFGVA SSAQTNQDTSGGFTFGSVSSTVSFSPAATYSGSTGLQVPAADDDSSRASAAGLKSAEE KKPEAPAVTAFSFGKTDQNKETVSTSFIFGKKDEKTDSAPTGNSFGFGLKKDGEEPKQ FLFGKPEPTKEDSTSSTASAGFAFRVSNPTEKKDVEQPVKSVFAFGSQTSTTDAGASK QPFSFLTGVSSTSASSSASGVSSSVFGSVAQSSTPANPSNVFGSATSSNPPAVSSGVF GNLNPSNAPASSSTLFGNVAPSSTPSGSSSLFGTANPSSTPASSSSLFGTAAKLSAPV GSGGVFNSAAPVPPASTSSSVFGSAAPANTSANSANIFGSAGGTSGAPGTFVFGQPAS TTSTVFGNSSESKSTFAFSGQETKPVTSAITSATPFVFGAESASTTPAAPGFNFGRTN TSNVTGTSSSPFIFGGGPTASASPSLTAHANPVPAFGQSANSSTAPAFGSSTSVFPAG NSQQVPAFGSSTAQPPVFGQQAAQPSFGSSAAPSAGSGFQFGNNTNFNFTTPNSSGGV FTFGANAGSTPQPPAPGFMFNAAASGFNVGTNGRSTPASSISNRKIKTARRRK" BASE COUNT 1389 a 1211 c 1154 g 1313 t ORIGIN 1 agttgagcgg gtagcgagga gaagaggcct ggaaacgcgc gtacgcagct gtttcggggc 61 cacggaagct tccccagtgc gtgtttcccc acttccacag gggctgctga gcggtgcctg 121 tcgggagttg ttacgctaca gttgtattag tgagggcgca gtcggggggg gggacctcgg 181 gccaagagtg acccgaacag ggtcctggtg aacaaacgga tggcggcggc cggaggaggc 241 ggaggggcag gtgaatcggg aaccgggggc aaaatacgga gtagaagata ccacctcagt 301 tccggacgga ctccttacag caagagccgg cagcggcagg gtatcatcag tcgtgtcaca 361 gatgctgtca agagcattgt tcctggatgg ttgcagaatt attttaataa acaagaagaa 421 gaacgcggta gagcacataa tgcaagtgaa ctgattgtgg aggatactga gggtagacaa 481 aataacactg aacaccatat atatgttgat gatgaaggaa actctgcaag tggcagagtc 541 acacctgaac caataattaa tgttgatgaa gaagttccgt ccactagtca gtcggcaata 601 aatgacacag atgcccttac tagaccatca ttgcatcggg ctaatctaaa cttcaaccta 661 tttgattctc cggccatgaa ctgccagccc acaacttcta catttcctat tggcacctct 721 ggcttctccc ttgttaaaga gattaaggac tctacctctc aacatgatga tgataacatt 781 tccaccacca gtggtttttc ttctcgagca tctgataagg atatggcagt ttccaaaaat 841 gtcggtgtgc cacctctttg gtctcctgaa gttgatcgct cacagtcttt gtcacataac 901 tcctccatga cctccaaaaa accaactttt aatttgtctg ctttcagttc tctgtcacca 961 tctcttggaa acgcctcttt cgtaaacagt cagcttgggg attctccttt ttatcctggt 1021 aaaacaacat accaaggagc agctgcagtc cgttcctctc gtgtgcgctc taacccatat 1081 caagcacctt tacgaagaca ggtgaaggca aaaccagcaa acgctcagca gtatggggtt 1141 accagctcca ctgctcgtcg cattctacag tctttggaga agatgtctag ccctttggcg 1201 gatgccaaaa ggattccatc aaactcttta tcacatacac cagaaaagag cctcatggat 1261 attgcagaaa acccatcaaa aaggaaaaaa gtggagtctc catttccccc tgttcagaaa 1321 cttgtgactc caaaatcaat ttctgtctct acaaaccgtt ccctgtatat caagccttca 1381 ctgacaccat ctgctgtatc aaatacaagc agtcgcagag tacagccaga caagcacaat 1441 gagtccagag agaataatgt tcagactgtg caatcaacat ctcacagctt ctcttaccca 1501 aagttcagca ctccgacatc caatgaattg ctatcaagag gtggtggcaa aatgatgagg 1561 cagaaaggct ctcattattc aacaaagcca gctgaggaga caagtggatt aaccagcagc 1621 agcccattgt tcacattttc atcccctatt gtgaaatcaa ctgaatcaaa tgctcagtct 1681 cctggctcat ctgttgattt tacattcagt gtaccaacag tcaaagtgtc ttctgcaaca 1741 acatctatag atagcaaggt gtctgctgta agtaccacag ctaaaacgca tattgctgtg 1801 aataacagca gtgcaaagga ctctgatgaa caagtgggat tttgtaaacc tgcaaaaact 1861 ttgaaggaag gaagtgtgtt agatatcctg agaagtccag ggttttcatc gtcaccttcc 1921 caacagactt cagcatccac tcccaacaga agcacatcaa ctttctcaaa gactgtggga 1981 aatgccttct cccctgtaaa ggtcacctta ggagtaggag gcaagcaagc tttgggactg 2041 tggcaatgca gtgcatgctg tcatgagaat atggcatctg acagcaactg tactgcttgc 2101 tgtgctgcaa aaccccagcc tgctgaaacc aacaagaaac tgcctgcttc accacaacat 2161 agcaatacaa aaaccaccgt tcccctttct agtgtacaag gactaggaga caaatttaaa 2221 ctgcctgcag gcacgtggga ttgtgacact tgtttagtac agaacaaagc agaggtaaca 2281 aagtgtgttg cttgtgaaac ccccaaacct ggcactggca tgaaagctaa cttgttgtta 2341 cctcctgcta caaaggcgct aaattctgct ccaactcctt ctgcttttgt atcttcttct 2401 ggaagcatta caaatgaaga aaagcctgaa ggatcttggg attgcacagg ttgtcgtatg 2461 cagaataaaa ctgagaataa tacatgtgtg gcctgcaaag cagataagcc aggagccatc 2521 aagagcttat ctacagctgc accatcaggg ctgctgggat tgttagatca ctttaagaaa 2581 ccagcaggga gctgggattg tgatgtctgc ttaatacaga acaaaccaga agccaccaaa 2641 tgtgttgcat gtgaaagtgc caagccaggc accaaaccag aactgaaagg tactttcgga 2701 acagtgcaaa cttcagctgc acccgtttct ttagggctgg gattgctaga tcagtttaag 2761 aagtcggcag gaagctggga ttgtgaagtc tgtctggtag aaaacaaacc agaagccaac 2821 aaatgtattg cctgtgagag tgcaaagcca ggcaccaaag cagagttaaa aggttttgga 2881 acatcaacct tatcagctgg aaccacagct ccaaccttca agtttggtgt gcaaccctcg 2941 gatagcgcag gggagttgaa atcaggtgcc tctacagact ctacaagtgg cttttctttt 3001 gccaaaccta taggggattt taaatttggt ttagcatctg cctccgcaac aacagaagaa 3061 actggcaaga aaagctttac atttggcact tctaccagca atcaagcttc agcaggtttt 3121 aagtttggcg ttgccagctc tgctcagaca aaccaagaca ccagtggtgg tttcacattc 3181 ggctctgtat ccagcactgt ttctttttct cctgctgcaa cttattcagg gagtacaggc 3241 ttgcaggtgc cggctgcaga tgacgattcc agccgtgcat cagcagctgg cttaaaatct 3301 gcagaagaaa aaaagcctga agcacctgcc gtgacagctt tttcttttgg gaaaacagat 3361 caaaataaag agactgtatc cacatcgttt atctttggaa agaaagatga aaagactgac 3421 tctgctccaa ctggaaactc gtttggtttt gggttaaaaa aggatgggga ggagcctaag 3481 cagtttctgt ttggaaaacc tgagccaacc aaagaagata gtactagtag tacagcatct 3541 gctggttttg cttttagagt gtctaatccc accgagaaaa aggatgttga acagcctgtg 3601 aagtcagttt ttgcctttgg gtctcaaact tccacaacag atgctggagc ttccaagcag 3661 cctttcagtt tcctgaccgg tgtctcctcc acttcagctt catcaagcgc ttctggtgtc 3721 tctagcagtg tgtttggcag tgtggctcag tccagcactc ctgcaaaccc tagtaatgtg 3781 ttcggtagtg ctacttcatc aaatcctcct gccgtgtcta gtggtgtatt tggaaacctt 3841 aatccatcaa atgcccctgc aagttctagc actttgtttg gtaatgttgc tccttcaagt 3901 actccctcgg gctccagtag tttgtttggc actgctaacc catcaagtac tcctgccagt 3961 tccagtagct tgtttggcac tgcagccaaa ctgagtgctc ctgtgggctc tggtggggtg 4021 ttcaacagtg cggcccctgt gcccccagca tcaacttcaa gtagtgtgtt tggaagtgcg 4081 gctccagcaa acacttctgc aaattctgca aacatatttg gaagcgctgg tggaacctct 4141 ggtgctcctg ggacttttgt gtttggacag ccagctagca ctactagcac tgtttttggg 4201 aattcaagtg aatccaagtc aacatttgct ttctctggtc aggagactaa accagtgacc 4261 tctgcaatta cttctgctac tccatttgta tttggagcag agtctgccag tactacccca 4321 gcagctccag gttttaactt tggacgaaca aacacctcaa acgtgacagg cactagttct 4381 tctccgttta tctttggtgg tggcccaact gcctcagctt caccgagcct gactgctcat 4441 gctaatccag tgccggcatt tgggcaaagt gctaactcat ctactgctcc ggcttttggg 4501 tcttcaactt cagtgtttcc agctggtaat tctcagcaag tgccagcctt tggttctagt 4561 actgcacagc cccctgtgtt tgggcagcaa gctgctcagc cttcttttgg atcatctgct 4621 gcacccagtg ctggatctgg cttccagttt ggcaacaaca caaacttcaa ctttaccacc 4681 ccaaattcgt caggtggagt gttcactttt ggtgcaaatg ctggatccac cccccagcca 4741 cctgccccag gctttatgtt taatgcagct gcttcaggtt ttaacgtggg aacgaacggc 4801 aggagtactc cagcatcttc tatttcgaat cgcaagataa agaccgccag aagacgaaaa 4861 taattctgaa tgtgctagaa gtaatcgctt tttttcaaga aatgaatggt gtcctgcatt 4921 gtacaaatcc tggagtgtac ctcatgctgt gtgtagtgga agtcagattg gctcaaggac 4981 aaaatatatg ctgaaactgt tgtttttttc tcccctgtaa ttaaaatatg gtgatgggaa 5041 atttcttaag cgagaaaaaa aaaaaaa //