LOCUS       JX195555                1300 bp    DNA     linear   BCT 05-DEC-2013
DEFINITION  Pseudomonas aeruginosa strain ODM-24 integron aminoglycoside
            adenylyltransferase (aadA6) and hypothetical protein genes,
            complete cds.
ACCESSION   JX195555
VERSION     JX195555.1
KEYWORDS    .
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Odumosu,B.T., Adeniyi,B.A. and Chandra,R.
  TITLE     Analysis of integrons and associated gene cassettes in clinical
            isolates of multidrug resistant Pseudomonas aeruginosa from
            Southwest Nigeria
  JOURNAL   Ann. Clin. Microbiol. Antimicrob. 12 (1), 29 (2013)
   PUBMED   24143920
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Odumosu,B.T., Soge,O.O., Adeniyi,B.A. and Chandra,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUN-2012) Global Health, University of Washington,
            325 9th Ave, Seattle, WA 98104, USA
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="ODM-24"
                     /isolation_source="urine"
                     /db_xref="taxon:287"
                     /geo_loc_name="Nigeria"
                     /collection_date="Jul-2010"
                     /PCR_primers="fwd_name: hep58, fwd_seq:
                     tcatggcttgttatgactgt, rev_name: hep59, rev_seq:
                     gtagggcttattatgcacgc"
     mobile_element  <1..>1300
                     /mobile_element_type="integron"
     gene            91..936
                     /gene="aadA6"
     CDS             91..936
                     /gene="aadA6"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside adenylyltransferase"
                     /protein_id="AFQ94779.1"
                     /translation="MSNAVPAEISVQLSLALNAIERHLESTLLAVHLYGSALDGGLKP
                     YSDIDLLVTVAARLDETVRQALVVDLLEISASPGQSEALRALEVTIVVHGDVVPWRYP
                     ARRELQFGEWQRKDILAGIFEPATTDVDLAILLTKVRQHSLALAGSAAEDFFNPVPEG
                     DLFKALSDTLKLWNSQPDWEGDERNVVLTLSRIWYSAATGKIAPKDIVANWAMERLPD
                     QHKPVLLEARQAYLGQGEDCLASRADQLAAFVHFVKHEATKLLSAMPVMSNNSFKPTP
                     LRGAA"
     CDS             978..1256
                     /note="OrfD"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="AFQ94780.1"
                     /translation="MFIQTAFSFSNAVQRWVCRFSGLRLVALRWFVVFLASGPCVASA
                     SSYFFRSAVPPRWHRAFSQLAPVAKLRLSVLASGSNISVKPTRILRSA"
BASE COUNT          268 a          342 c          352 g          338 t
ORIGIN      
        1 gcgcgttacg ccgtgggtcg atgtttgatg ttatggagca gcaacgatgt tacgcagcag
       61 ggcagtcgcc ctaaaacaaa gttagacatc atgagtaacg cagtacccgc cgagatttcg
      121 gtacagctat cactggctct caacgccatc gagcgtcatc tggaatcaac gttgctggcc
      181 gtgcatttgt acggctctgc actggacggt ggcctgaagc catacagtga tattgatttg
      241 ctggttactg tggctgcacg gctcgatgag actgtccgac aagccctggt cgtagatctc
      301 ttggaaattt ctgcctcccc tggccaaagt gaagctctcc gcgccttgga agttaccatc
      361 gtcgtgcatg gtgatgttgt cccttggcgt tatccggcca gacgggaact gcaattcggg
      421 gagtggcagc gtaaggacat tcttgcgggc atcttcgagc ccgccacaac cgatgttgat
      481 ctggctattc tgctaactaa agtaaggcag catagccttg cattggcagg ttcggccgca
      541 gaggatttct ttaacccagt tccggaaggc gatctattca aggcattgag cgacactctg
      601 aaactatgga attcgcagcc ggattgggaa ggcgatgagc ggaatgtagt gcttaccttg
      661 tctcgcattt ggtacagcgc agcaaccggc aagatcgcac cgaaggatat cgttgccaac
      721 tgggcaatgg agcgtctgcc agatcaacat aagcccgtac tgcttgaagc ccggcaggct
      781 tatcttggac aaggagaaga ttgcttggcc tcacgcgcgg atcagttggc ggcgttcgtt
      841 cacttcgtga aacatgaagc cactaaattg cttagtgcca tgccagtgat gtctaacaat
      901 tcattcaagc cgacgccgct tcgcggcgcg gcttaattca ggcgttagta ccactgaaac
      961 cctcctttat ttcgcccatg tttattcaaa cggcattcag tttctcaaac gctgtgcagc
     1021 gctgggtttg ccgtttctct gggcttcgcc tggtggcgtt acgctggttt gtggtctttt
     1081 tggcctctgg cccttgtgta gcaagcgcga gcagctattt ttttcgtagt gctgtgccgc
     1141 ctcggtggca ccgtgccttt tcgcagttag cgcccgtcgc caagttacgg ttatccgttt
     1201 tggcttctgg ctctaacatt tcggtcaagc cgacccgcat tctgcggtcg gcttaactcg
     1261 cccgttagat gcactaagca cataattgct cacagccaaa
//