LOCUS       JX177643                 853 bp    RNA     linear   VRL 05-JUL-2013
DEFINITION  Human rhinovirus sp. isolate KL0809-374 polyprotein gene, partial
            cds.
ACCESSION   JX177643
VERSION     JX177643.1
KEYWORDS    .
SOURCE      Human rhinovirus sp.
  ORGANISM  Human rhinovirus sp.
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Picornavirales; Picornaviridae; Ensavirinae; Enterovirus.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Kim,H., Kim,K., Kim,D.W., Jung,H.D., Min Cheong,H., Kim,K.H., Soo
            Kim,D. and Kim,Y.J.
  TITLE     Identification of Recombinant Human Rhinovirus A and C in
            Circulating Strains from Upper and Lower Respiratory Infections
  JOURNAL   PLoS ONE 8 (6), E68081 (2013)
   PUBMED   23826363
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Kim,H., Kim,Y.-J., Cheong,H.-M. and Kim,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUN-2012) Division of Respiratory Viruses, Center for
            Infectious Diseases, Korea National Institute of Health, 197
            Osongsngmyeng2-Ro, Osong-Eup, Cheongwon-Gun, Chungbuk 363-951,
            Korea
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Human rhinovirus sp."
                     /mol_type="genomic RNA"
                     /isolate="KL0809-374"
                     /isolation_source="nasopharyngeal aspirate of lower
                     respiratory infected patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:169066"
                     /geo_loc_name="South Korea"
                     /collection_date="09-Mar-2009"
     CDS             437..>853
                     /note="VP4-VP2 region"
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="AFQ41639.1"
                     /translation="MGAQVSKQNVGSHESGISASSGSVIKYFNINYYKDSASSGLSKQ
                     DFSMDPEKFTKPLADVMTNPALMSPSIEACGFSDRLKQITIGSSTITTQDTLNTVVAY
                     GEWPEYLKDTDASAVDKPTHPETSTDRFYTLTSVTWN"
BASE COUNT          238 a          196 c          189 g          230 t
ORIGIN      
        1 ccccggttga agttgatatg ctccaccagg gcaaaaacaa ctgagatcgt tatccgcaaa
       61 atgcctacac aaagcctagt atcatcttga aaggcgcaga gttggtcgtt ccactattcc
      121 ccatagtaga cctggcagat gaggctagaa aacccccact ggcgacagtg ttctagcctg
      181 cgtggctgcc tgcgtgcctt gcaaggcacg aagccctgtg tttgacaagg tgtgaagagc
      241 cccgtgtgct cattttgatt cctccggccc ctgaatgtgg ctaaccttaa ccctgcagct
      301 agtgcacaca aaccagtgtg tatctagtcg taatgagcaa ttgtgggatg gaaccgacta
      361 ctttgggtgt ccgtgtttct ttttattctt attatttgct tatggtgaca atattgatat
      421 tatcagtgtt gtcatcatgg gcgcccaggt tagcaaacag aatgttggct ctcatgaaag
      481 tggaatatct gcatcatcag gttcagttat aaagtatttc aatatcaatt attataagga
      541 ttcagctagt agtggcttaa gcaaacaaga tttctcaatg gatccagaaa agttcaccaa
      601 acctttagct gacgtcatga ccaacccagc gttaatgagt ccaagtatag aggcttgtgg
      661 gttctccgat aggctaaaac aaatcactat cggtagctcc acaattacaa cacaggatac
      721 tttgaacaca gtagtagcat acggcgagtg gccggaatac ttaaaagata ctgatgccag
      781 tgccgtggat aaacctactc atcctgagac ttccaccgat cgattttaca cactcacaag
      841 tgttacctgg aat
//