LOCUS JU400163 558 bp mRNA linear TSA 31-MAY-2012
DEFINITION TSA: Scophthalmus maximus Pmax_rep_c56371 mRNA sequence.
ACCESSION JU400163
VERSION JU400163.1
DBLINK BioProject: PRJNA89091
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Scophthalmus maximus (turbot)
ORGANISM Scophthalmus maximus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
Scophthalmidae; Scophthalmus.
REFERENCE 1 (bases 1 to 558)
AUTHORS Pereiro,P., Balseiro,P., Romero,A., Dios,S., Forn-Cuni,G.,
Fuste,B., Planas,J.V., Beltran,S., Novoa,B. and Figueras,A.
TITLE High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus)
Transcriptome Using 454-Pyrosequencing for the Discovery of
Antiviral Immune Genes
JOURNAL PLoS ONE 7 (5), E35369 (2012)
PUBMED 22629298
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 558)
AUTHORS Pereiro,P.
TITLE Direct Submission
JOURNAL Submitted (16-MAR-2012) Inmunologia y Genomica, Instituto de
Investigacines Marinas (CSIC), Eduardo Cabello, 6, Vigo, Pontevedra
36208, Spain
COMMENT ##Assembly-Data-START##
Assembly Method :: MIRA V3.2.0
Sequencing Technology :: 454 GS-FLX Titanium
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..558
/organism="Scophthalmus maximus"
/mol_type="mRNA"
/db_xref="taxon:52904"
BASE COUNT 116 a 149 c 145 g 147 t
ORIGIN
1 tgacaggtgg cttgttctat ttggtctcct ttactcagcg ggcaaaacca tgttcaggta
61 caccttgatg ttgtcgatgg catcgctcag gtagtgccaa cgtagggacg catgtaatgc
121 tcgtacaggc ccagtgttga ttgacgggcc ttgtccacca ggggacctgc ctcctctccc
181 aggccagtgg caaccttgac gacggcttgg aactcgggct tggcctgcag atcctccatg
241 taggtcttgg cagtctgtcc acgctcgctt tcaccaattt tctccaccaa aggagcaacg
301 gccaactgga gcttgctgta ggctgtcagc agcctcttga agaacactgc tttcattgag
361 tcatacttct caacaagttc ctgtgatggt gcgggaacct cacacaggct catggagacc
421 tgcagagcga ggatcagtgc caaggcatat tttgcattca tatctgctgt tgtgtytgga
481 tgtacaggtc caagaagtga cagtcctctc tgaaagtgag ttgtctgtaa ccccccgtat
541 cctgcgttga taccactg
//