LOCUS JU399250 649 bp mRNA linear TSA 31-MAY-2012
DEFINITION TSA: Scophthalmus maximus Pmax_rep_c55286 mRNA sequence.
ACCESSION JU399250
VERSION JU399250.1
DBLINK BioProject: PRJNA89091
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Scophthalmus maximus (turbot)
ORGANISM Scophthalmus maximus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
Scophthalmidae; Scophthalmus.
REFERENCE 1 (bases 1 to 649)
AUTHORS Pereiro,P., Balseiro,P., Romero,A., Dios,S., Forn-Cuni,G.,
Fuste,B., Planas,J.V., Beltran,S., Novoa,B. and Figueras,A.
TITLE High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus)
Transcriptome Using 454-Pyrosequencing for the Discovery of
Antiviral Immune Genes
JOURNAL PLoS ONE 7 (5), E35369 (2012)
PUBMED 22629298
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 649)
AUTHORS Pereiro,P.
TITLE Direct Submission
JOURNAL Submitted (16-MAR-2012) Inmunologia y Genomica, Instituto de
Investigacines Marinas (CSIC), Eduardo Cabello, 6, Vigo, Pontevedra
36208, Spain
COMMENT ##Assembly-Data-START##
Assembly Method :: MIRA V3.2.0
Sequencing Technology :: 454 GS-FLX Titanium
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..649
/organism="Scophthalmus maximus"
/mol_type="mRNA"
/db_xref="taxon:52904"
BASE COUNT 163 a 137 c 142 g 206 t
ORIGIN
1 taaatctaga tgaaactttt gttcaagaat tataccagtt tcaattcata tttatttttc
61 cattcatgag atatttggac acccctttgt gcagcgttgt tataactaag cttccaataa
121 cagaaaaagg tgccggacaa atatatcaat aataacatag gttttaatgg cgtgagagaa
181 attgacctgt gtgtcaaaaa atgtttcctc tcttgcagaa ttgtcccttt tcagggacgg
241 ttccttcatt actctgtgtt gtctcacagt tgtatcaagt tctaagtgtt acgagggggt
301 tgatctctag ttgtgcagct ttaactctgc tccacagaga agtytgactc agatatttct
361 tggtgcttgt gaatcatgtg gttgttgtac tccaaaacag gggggatggc ctcctcatcc
421 tcagggacct cccagtacac ttcatcgtca aagcagggtg agctgcaggg tgttgtgtcc
481 tgggggctat ggatgtgctg agagggatca ccctggtgtc tacgccaagg tctgcctctt
541 caacgattgg ctggagacaa ccatggacca actattaagt ctgatcctac gatcaacatt
601 taactctact gcctttctcc atcattctaa ctccaatgct gttgtggag
//