LOCUS JU376099 1090 bp mRNA linear TSA 31-MAY-2012
DEFINITION TSA: Scophthalmus maximus Pmax_rep_c12824 mRNA sequence.
ACCESSION JU376099
VERSION JU376099.1
DBLINK BioProject: PRJNA89091
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Scophthalmus maximus (turbot)
ORGANISM Scophthalmus maximus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
Scophthalmidae; Scophthalmus.
REFERENCE 1 (bases 1 to 1090)
AUTHORS Pereiro,P., Balseiro,P., Romero,A., Dios,S., Forn-Cuni,G.,
Fuste,B., Planas,J.V., Beltran,S., Novoa,B. and Figueras,A.
TITLE High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus)
Transcriptome Using 454-Pyrosequencing for the Discovery of
Antiviral Immune Genes
JOURNAL PLoS ONE 7 (5), E35369 (2012)
PUBMED 22629298
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 1090)
AUTHORS Pereiro,P.
TITLE Direct Submission
JOURNAL Submitted (16-MAR-2012) Inmunologia y Genomica, Instituto de
Investigacines Marinas (CSIC), Eduardo Cabello, 6, Vigo, Pontevedra
36208, Spain
COMMENT ##Assembly-Data-START##
Assembly Method :: MIRA V3.2.0
Sequencing Technology :: 454 GS-FLX Titanium
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1090
/organism="Scophthalmus maximus"
/mol_type="mRNA"
/db_xref="taxon:52904"
BASE COUNT 263 a 282 c 219 g 320 t
ORIGIN
1 aggagaggct ttgtggaaat ggaactgttg gggcagctaa atcaaccatc caaacaggaa
61 cccccacgga gagccccccc ctcccctcga ctgtaaacaa catggtgatc agctccatct
121 ctgaaggggc tgtcattgac tttgcacttt tcttacttgt ggttactatg ggtacataca
181 cgttcaacac accaccgcaa aaaacaccaa aacctaaatt gtaagcagtt tttaactagg
241 aatttaaccc cctgaatttc aaaatccaca gggttttcaa tttgcccttt ttttttcatg
301 tgttttcatt ttcctgggtt cggagggagt tgaggtttca gactctgtct ttcactttcc
361 tagctcaagg taaagaaacg cccgaataag agcatctcta ttttctataa caaaacccct
421 tttggaccac agggcatcag ttttctttat cttgtagctg ggaaaaggct tttcagtctc
481 acctcccacc accaccacga caaagtttcc gaaaaataaa cgtcatctca accggwctct
541 ggcctgtatg tacgtgcaag tggaatgtgt tgtgacacct gttacctatg gataccagcg
601 tgtcctgttg cacygacgcc yycccatcac ccatgtatgt gtagctttct ggggggaggg
661 cagggggacg tctcctcccc cccccccttc attctaatga atgttgttga aattcacaat
721 caagttcctg tgttgttggt tctgcccccc ttttcccacc acctccaccg ccacgttgtc
781 gtctcctgca tcaccaaaat tctaaaagtg tagcaaagga agaggtgggg ttgctatttt
841 acccaaaatt tttggtcaag tgaccctgtt agaattgaca ttgaatgcac tttgacgtga
901 gattgtgtgg gatgtgtaaa tttttggaga aaaatcgcct gcattccatc cattcraatg
961 tcrtgtttcc acaccgcttt aattagcccc ctcctgcccc attcttcttc ttgccgttta
1021 ctcatactgt agctccccca gtcgggatag acggatgtct attaaactgg ggatgtgcaa
1081 ctctggattt
//