LOCUS JQ717264 3482 bp RNA linear VRL 05-OCT-2012 DEFINITION Golden Gate virus isolate BC segment S, complete sequence. ACCESSION JQ717264 VERSION JQ717264.1 KEYWORDS . SOURCE Golden Gate virus ORGANISM Golden Gate virus Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Bunyaviricetes; Hareavirales; Arenaviridae; Reptarenavirus; Reptarenavirus aurei. REFERENCE 1 (bases 1 to 3482) AUTHORS Stenglein,M.D., Sanders,C., Kistler,A.L., Ruby,J.G., Franco,J.Y., Reavill,D.R., Dunker,F. and Derisi,J.L. TITLE Identification, characterization, and in vitro culture of highly divergent arenaviruses from boa constrictors and annulated tree boas: candidate etiological agents for snake inclusion body disease JOURNAL MBio 3 (4), e00180-12 (2012) PUBMED 22893382 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3482) AUTHORS Stenglein,M.D., Franco,J.Y., Kistler,A.L., Sanders,C., Reavill,D., Dunker,F. and DeRisi,J.L. TITLE Direct Submission JOURNAL Submitted (28-FEB-2012) Department of Biochemistry, University of California, San Francisco, Byers Hall, Rm s403c, 1700 4th St, San Francisco, CA 94158-2330, USA COMMENT GenBank Accession Numbers JQ717263, JQ717264 represent sequences from the 2 segments of Golden Gate virus isolate BC. FEATURES Location/Qualifiers source 1..3482 /organism="Golden Gate virus" /mol_type="genomic RNA" /isolate="BC" /host="Boa constrictor" /db_xref="taxon:1223562" /segment="S" /geo_loc_name="USA: California" /collection_date="08-Jul-2009" gene 161..1444 /gene="GPC" CDS 161..1444 /gene="GPC" /note="GPC protein" /codon_start=1 /product="glycoprotein" /protein_id="AFP93555.1" /translation="MMSHIRLVLCSALLSMMSCPTSGTIGEMLSLAASSNSSICHGMQ FTEPTESFMGILPNETLPMFIFSIMHSEAVPKVGKTLRISHDMKLFGGEAVNYMIFVN KILYEPISYYNYTGSCRQQGLSSCVRVYSDLVNGSKGNPSVKLGFTAIELNKTKNTDF HNLGFKICFSCRDHNGIRLVVYNKNNRTAQLMMCPSELIFSQDFTINSTSVNPSEEAA VPLLNVTGYTCIALHNKNMLTHHSPALSSGSKVDNTLEPGCDSNVGLFGHSTGTDYGW GLANFFSAGITNSLQISQLEHVTDAIACKIAKTSNYTTTALFLLNKEEGEIRDHVIEH EVALNYLLAHQGGLCSVVKGPMCCSDIDDFRRNVSDMIDKVHEEMKKFYHEPDPFGGL GTWGFYGTIFGHVLQWIPIIIMVVVVCFVCSWVRK" gene complement(1616..3391) /gene="NP" CDS complement(1616..3391) /gene="NP" /note="NP protein" /codon_start=1 /product="nucleoprotein" /protein_id="AFP93556.1" /translation="MAAFQKAAVNQLALKKKLNKMLAPYQRELNNQIFKDVKALRVGL DINKVNDTLRRLRKETKGPNDLKNLRDLNETAAGLSGMVATQRTVEIDSSLMSDEELI QCIENIDVIKKKAEYKGGSRPRISEFESETGMSKSDHEMFNKLFNRFAPKKDPGPAAF STPKSWVGISPADLANQFGTSPAITICLIMMRTNSPFKQILDALHDISLLDQGMFVNA SVVKAMTSQHPCLDCVEYTVPKNSSGYNITVKAVVKAANVLSKLPKVEKLVIDDDNRV EIIRTLLTIQRELNIKIQVNEERGLFEDIFYKICVSPNGPCVVSIRSELTGRGWENTI FRLRRPPPYAPRLYPDLMDLDLDALPPVKGDKKTEEESKIYIFKPAADEIDEYIRSPE SASSDSEIPDPRVLYMANACEDLFKGGDSVFMDIEGTAQDPVEIALFNPDTGKFVHIF RMPKDKDGFKKASKHAHGLLLDDISDHPDLQTDKNIEAFFSKVPLSARIFCQGSDIEE CLKFFGRKDLKPTDCKWKREEFMKYHENILDELSEVFPCKHSGTVKDKKGALTAPHCA LLDCLMFSRTASGGKKTKDPTPATI" BASE COUNT 895 a 798 c 734 g 1055 t ORIGIN 1 cgcactgggg atccgagttt tccagtatcg aacaaaaata aacaatcaaa aggagtccaa 61 tctcaagcca acaaccacaa gagcgccgac aagaaaggag ccagcaaaaa agcacaaggc 121 accaaggctc ctgcccacaa aggcagccct gaagaccaga atgatgagtc atatccggtt 181 ggtgctctgc tcagctctgc tgtctatgat gtcctgccca acatctggga caattggtga 241 aatgctttcc ttggcggcat caagcaactc tagcatatgt cacggcatgc agttcactga 301 accaactgag tcattcatgg gaatcctgcc aaatgagacc ctaccaatgt tcatcttctc 361 tattatgcac agtgaggctg tgcccaaggt ggggaagact ttgagaatca gccatgatat 421 gaaactcttt ggaggggaag ctgtcaatta catgatattt gtcaacaaga ttctttatga 481 accaatttct tactacaact acactggctc ttgtagacaa caagggctct catcctgtgt 541 gagggtttat tccgatcttg ttaatggctc caaaggcaac ccatcagtga agcttggttt 601 cacagccatc gaactcaaca aaaccaaaaa caccgacttt cacaacttag gcttcaaaat 661 ttgcttctcc tgtagagatc ataatggaat aagattggtt gtctacaaca aaaataaccg 721 cactgcacaa ttgatgatgt gtcccagtga attaatcttc tctcaggact tcactattaa 781 ttcaacatcg gtgaatccta gtgaggaggc cgcagtacca ttgctgaatg tgacaggtta 841 cacgtgcatt gccttacaca acaaaaatat gctcacccac catagccccg ctctttccag 901 tgggtccaag gtagacaaca cactggaacc tggttgtgac tccaacgttg gactcttcgg 961 ccatagcaca gggaccgatt atggctgggg gcttgcaaat ttctttagtg caggcataac 1021 aaactcactt caaatatcac aattagaaca tgtgactgac gccattgcat gcaagatagc 1081 caaaacatcc aactacacaa ccacagccct gttcctgtta aacaaggaag aaggtgaaat 1141 cagagatcat gtcattgagc atgaagttgc tctaaattat ctcttagctc atcagggtgg 1201 actctgcagt gttgtgaagg gcccaatgtg ttgctctgac attgatgact ttagaaggaa 1261 tgtttctgat atgattgata aagttcatga agaaatgaag aaattctatc atgaaccaga 1321 tccctttggt gggcttggca cttggggctt ctatggtacc atttttgggc atgtgctaca 1381 gtggattcct ataataatta tggtagtcgt ggtttgtttt gtttgcagct gggtaagaaa 1441 gtaacaccac gtgcccaccc tctggttgtt tgtttcccgg aatggtagtc gtggtttgtt 1501 ttgtttgcag ctgggtaaga aagcaacacc acgtggccca ccctctggtt gtttgtttcc 1561 cggtccgccc gccctgggtg ctttgttcgg tccgggcttg gttgtttgga cccgtttaga 1621 tggtggctgg ggttgggtcc tttgtttttt tgcctccact tgctgttcta ctgaacatca 1681 ggcaatccag cagagcacaa tgtggtgcag tcagggctcc tttcttgtcc ttcactgttc 1741 ctgagtgctt gcaggggaaa acttcagata gctcatcaag tatattctca tgatatttca 1801 taaattcttc ccttttccac ttacagtctg tgggctttaa atcttttcta ccaaagaatt 1861 taaggcactc ctcaatatct gacccttggc agaagattct tgctgagagc ggtactttgg 1921 aaaagaaagc ctcaatgttt ttgtcagtct gcaggtctgg atggtcagat atatcatcca 1981 acaaaagacc atgtgcatgt ttggatgcct ttttgaaacc atccttgtcc tttggcatcc 2041 taaaaatatg cacaaatttg cctgtgtcgg gattgaacag tgctatttcc acaggatctt 2101 gagctgtacc ttctatgtcc ataaacacag agtctcctcc cttgaaaagg tcttcacaag 2161 cgtttgccat ataaagaact cttggatcag ggatctcaga gtctgagctt gcactttctg 2221 gacttcttat gtactcatca atctcatctg cagcaggctt gaagatgtaa attttggact 2281 cttcttcagt tttcttgtca cccttcactg gtggaagtgc atccaagtca agatccatca 2341 aatcagggta caatcttgga gcataaggag gtggtcttct caaacggaag atggtatttt 2401 cccaacccct gcctgttagt tctgatctta tggaaaccac acaagggccg tttggcgaga 2461 cacagatttt atagaagata tcttcaaaca gtcccctttc ttcattcact tgtattttga 2521 tgttaagttc tctctgtatg gtcagtaagg ttcttattat ttcaacccta ttgtcatcat 2581 caataaccaa tttctcgacc tttgggagct ttgacaacac atttgctgcc tttaccacag 2641 ctttgactgt aatgttgtaa ccagaagagt tctttggcac tgtatattca acacaatcta 2701 aacaaggatg ttgagaagtc atggccttta ccacagaagc gttcacaaac ataccctgat 2761 ccaacagtga gatgtcatgt agagcatcca gtatttgctt gaaaggagaa tttgtcctca 2821 tcattattag acagatagta atggcgggtg atgtcccaaa ctggtttgca agatctgctg 2881 ggctgattcc cacccatgat ttgggagtgg agaatgctgc aggtcctggg tccttctttg 2941 gggcaaacct gttgaacaac ttgttgaaca tttcgtgatc actttttgac attccagtct 3001 ctgactcaaa ctcactgatg cgtggtcttg atcctccttt gtattccgcc tttttcttta 3061 taacgtctat attttcaatg cactgaatta actcttcatc actcattaat gaagagtcaa 3121 tctccacagt cctctgagtt gccaccatgc ctgagaggcc tgcagcagtt tcatttagat 3181 ctctcagatt tttcagatca tttggtccct ttgtctcctt ccttagtctc ctcagggtgt 3241 cattgacttt attgatgtca agacccaccc ttagtgcttt cacatcttta aaaatctgat 3301 tgttgagctc cctttgatag ggtgccaaca tcttgttcaa cttctttttt aaggctagct 3361 gatttacagc agctttttga aaggctgcca tgttgcttgc agagctctgg tctcactttt 3421 ggggatagtc ttgcaggtat tgtccctttg gctatcgctg tgaaactcgg atcctctgtg 3481 cg //