LOCUS JQ519175 1044 bp DNA linear VRT 31-JUL-2012
DEFINITION Squalus sp. 1 GJPN-2012 NADH dehydrogenase subunit 2 (NADH2) gene,
partial cds; mitochondrial.
ACCESSION JQ519175
VERSION JQ519175.1
KEYWORDS .
SOURCE mitochondrion Squalus sp. 1 GJPN-2012
ORGANISM Squalus sp. 1 GJPN-2012
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
Elasmobranchii; Squalomorphii; Squaliformes; Squalidae; Squalus.
REFERENCE 1 (bases 1 to 1044)
AUTHORS Naylor,G.J.P., Caira,J.N., Jensen,K., Rosana,K.A.M., White,W.T. and
Last,P.R.
TITLE A DNA Sequence-Based Approach To the Identification of Shark and
Ray Species and Its Implications for Global Elasmobranch Diversity
and Parasitology
JOURNAL Bull. Am. Mus. Nat. Hist. 367, 1-262 (2012)
REFERENCE 2 (bases 1 to 1044)
AUTHORS Naylor,G.J.P., Caira,J.N., Jensen,K., Rosana,K.A.M., White,W.T. and
Last,P.R.
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2012) Biology, Grice Marine Laboratory, College
of Charleston, 205 Fort Johnson Road, Charleston, SC 29412, USA
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1044
/organism="Squalus sp. 1 GJPN-2012"
/organelle="mitochondrion"
/mol_type="genomic DNA"
/specimen_voucher="UMMZ 231963"
/bio_material="GN976"
/db_xref="taxon:1214754"
/sex="female"
/geo_loc_name="Pacific Ocean: Taiwan"
gene 1..>1044
/gene="NADH2"
CDS 1..>1044
/gene="NADH2"
/codon_start=1
/transl_table=2
/product="NADH dehydrogenase subunit 2"
/protein_id="AFO64258.1"
/translation="MNPVVLTIIISSLGLGTMMTFIGSHWLLVWMGLEINTLAIIPLM
IHQHHPRAVEATTKYFLTQATASALLLFASITNAWNLGEWSLLEMLNPTSATLVTIAL
ALKIGLAPMHFWLPEVLQGLDLTTGLILATWQKLAPFAILLQLHPMLNSNLLLFLGIS
STMIGGWGGLNQTQLRKILAYSSIAPLGWMITILHYSPNLTQLNLALYIIMTLTTFLL
LKLFNSTKINSIATSTIKSPLLSIIALITLLSLGGLPPLSGFMPKWLILQELTKQDLA
IPATIMALAALLSLFFYLRLCYSTTLTMSPNSIYLSSSWRTKSLQPNLILMMTTSLSI
LLLPLTPTIFMLTL"
BASE COUNT 309 a 328 c 106 g 301 t
ORIGIN
1 atgaacccag tagtattaac catcattatc tcgagccttg gcctagggac cataataaca
61 tttattggat cccattgact tctagtatga ataggtcttg aaattaacac cctagccatc
121 atccccctaa taattcacca acaccaccca cgggcagtag aagcaaccac aaaatatttc
181 ctcacacaag caaccgcctc cgccttactt ttatttgcta gcattacaaa cgcctgaaac
241 ttaggcgaat gaagtttact tgaaatactt aacccaacct ccgccacact cgtaaccatt
301 gcattagcat taaaaattgg tcttgcacca atacatttct gattacctga agtacttcaa
361 ggactagacc ttaccacggg cctgatctta gccacatgac aaaaacttgc cccattcgct
421 attcttctcc aacttcaccc catactcaac tcaaatttac tattattttt aggcatttcc
481 tctactataa ttgggggatg aggcggactc aaccaaaccc aactacgaaa aatcctagct
541 tattcatcaa ttgcccccct tgggtggata attacaatct tacattactc ccccaacctc
601 acccaactca acctcgccct atatattatt ataaccctta caaccttcct cctccttaaa
661 ttatttaact ccactaaaat taattccatt gccacctcca caatcaaatc gcccctctta
721 tctattattg ctctaattac cctactctct ctcggaggcc tacctccact ttccgggttc
781 ataccaaaat gattaattct acaagaactt accaagcaag acctagccat cccagccacc
841 atcatagccc ttgcagccct cctcagttta ttcttctacc tccgcctatg ttactccaca
901 accctaacca tatccccaaa ctccatttat ttatcatcct cttgacgaac aaaatctctc
961 caaccaaacc taatcttaat gataactacc tccctctcca tcctgctctt accattaaca
1021 cctactattt ttatattaac cctc
//