LOCUS       JQ342715                1228 bp    DNA     linear   PLN 21-MAR-2014
DEFINITION  Chlorogalum purpureum isolate CA1 voucher Wilken 15701 SBBG
            cytochrome f (petA) gene, partial cds; petA-psbJ intergenic spacer,
            complete sequence; and PSII reaction center subunit X (psbJ) gene,
            partial cds; chloroplast.
ACCESSION   JQ342715
VERSION     JQ342715.1
KEYWORDS    .
SOURCE      chloroplast Chlorogalum purpureum
  ORGANISM  Chlorogalum purpureum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Asparagales;
            Asparagaceae; Agavoideae; Chlorogalum.
REFERENCE   1  (bases 1 to 1228)
  AUTHORS   Halpin,K.M. and Fishbein,M.
  TITLE     A Chloroplast Phylogeny of Agavaceae subfamily Chlorogaloideae:
            Implications for the Tempo of Evolution on Serpentine Soils
  JOURNAL   Syst. Bot. 38 (4), 996-1011 (2013)
REFERENCE   2  (bases 1 to 1228)
  AUTHORS   Halpin,K.M. and Fishbein,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2012) Botany, Oklahoma State University, 301
            Physical Science, Stillwater, OK 74078, USA
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Chlorogalum purpureum"
                     /organelle="plastid:chloroplast"
                     /mol_type="genomic DNA"
                     /isolate="CA1"
                     /specimen_voucher="Wilken 15701 SBBG"
                     /db_xref="taxon:1247856"
     gene            <1..41
                     /gene="petA"
     CDS             <1..41
                     /gene="petA"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome f"
                     /protein_id="AFV69287.1"
                     /translation="QFEKVQLFEMNF"
     misc_feature    42..1141
                     /note="petA-psbJ intergenic spacer"
     gene            complement(1142..>1228)
                     /gene="psbJ"
     CDS             complement(1142..>1228)
                     /gene="psbJ"
                     /codon_start=1
                     /transl_table=11
                     /product="PSII reaction center subunit X"
                     /protein_id="AFV69288.1"
                     /translation="IGTVAGIPVIGLIGIFFYGSYSGLGSSL"
BASE COUNT          425 a          191 c          187 g          425 t
ORIGIN      
        1 aacagtttga aaaggttcaa ttattcgaaa tgaatttcta gatccagaga ttccttacca
       61 tcaagttggt aaaaagcgcg gaattcttgt caatcaatac aattaaatat gtatgatcaa
      121 aaaattctgt aaatacctct gcttgctttg tttatactgc tttttcggga tgtatggaat
      181 tcattacttc tatcccattc ctagcactag acaataggca tataaaaaca aaggaagagg
      241 atacaagaca aggacgggat aaatgaaagg aacagatact tctaggaggg attataagtc
      301 ttcctaatct tccattcgac acaagaaaaa ggactttata ccctttcttg tgtcgttttg
      361 tatcgaaata ataatgattt ttatcttgtt cgtcaaagat tacaatttct tcttttccgg
      421 gtctatcgga attcctttgt ttagattcat aagaagtagt agacaaaaaa aggggttggg
      481 gggataattc atcgagcaaa tgaaacttct tctattattt tgaattaaat tcaacttaat
      541 aactataact taaacttatt tatatttcta aatttctaaa agaaatttga aaataaagga
      601 aaaattcttc aaacaaaaaa atttggactt tgactctttt ggttgaaaag cggattaaat
      661 tagattttta cgcatatcca aattcttatt ttttatttca tcacagtttt ttttttatct
      721 ttttatagag taaggtttta ttagtttagt atagaaatga tttgcaggat gtctcatccg
      781 tttaaataca taacatataa attggaaagt tatccagtca acataatcaa aatattctat
      841 tcgtagaaat gacaaaaagg atcctttttt ctgatttttc ctctattcct tcttttttat
      901 gatgtttttg aacaatgtaa ttgaatcaat ttctattgat tgatttatag tcgttcctcc
      961 ataatattaa cttttacgaa gcaacaagaa agaaggaatc aatcgatttt ctggataatc
     1021 caatattata tggaatagat caaagcctcg cctcgctcta agagtaagag agtaagaact
     1081 cagcggtaag ataccgctga gttcttactt tttcatgtct acagtctggt tcatctgatt
     1141 actacagaga tgaacccaac ccggaatatg aaccgtaaaa gaaaatacct attaaaccga
     1201 tcacaggaat accagctaca gtacctat
//