LOCUS       JO305683                 745 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c35378_c mRNA sequence.
ACCESSION   JO305683
VERSION     JO305683.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 745)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          166 a          125 c          217 g          237 t
ORIGIN      
        1 aactgtgatg gatgatgatg gtgacggtgt gtggatcgtt tgtaatgtca gctgcggtcc
       61 agacgatcgt atcgcatcga cggtggatga tgttgttgac aattcggttc gtttgtttca
      121 aaagagagga acacttctcg tatcgttgat ggatgatgac ggtgacgatt tccagattgt
      181 ttaccctggt gatcccgatg acggacggag ctctgtggtt atactgtggt gcttactgtg
      241 gtgctggtgg gacggtgtga ttacatcgaa aaggggctag cacgatggct atggtggcag
      301 aacatgaaga ggggaacgga tgctagggac gtcgatgcga cttaattgat gatgcaagcg
      361 atgactttaa ggaaagaaca aagatgtttt tgtagggaaa tataccgcga ggtgcgggtt
      421 cttagtgttt agtaaagttg gcctgagact cgtgtgacag tttcccaaaa tgcttcttgg
      481 tgcgtaaaag gaaagtagag attcgtgtgc gccatatggg gggacatcct gcgcgagatt
      541 atgcttttat ccccgttatt ccttttgctt tttcatttga cccttgacga ttcgtgttaa
      601 gataagtggt attttgtccc ttgtgttttc tcttgagctt cttgttactc tgtataggta
      661 ggtttttcct gagtgagggt taacgagcag ggcttaccaa tctgcgttga tatgctcaat
      721 tctctttcga caaggcctgt ttata
//