LOCUS       JO290843                 725 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c13695_c mRNA sequence.
ACCESSION   JO290843
VERSION     JO290843.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          194 a          119 c          157 g          250 t
ORIGIN      
        1 gtttttgcaa tatatattat atactcttaa gactttttta actcgctatt aagatcttaa
       61 gtacagagtg gcatcaattt tttggggcgt caaccgaaat gtgagctgac atttgatgta
      121 gtcgatgatt gaattatcac attaartkmm ckggatgtct attcggcgct ctttgtaaaa
      181 acgtgttagg agtcctagga gtccaggaca ctggcagttt aatacgattt gttgaggatt
      241 gatgactgtg cgtcgtcatc ccttagtgac atatagcctc tgcttttcac aactacacac
      301 aattttgtta gagtccctga gacttcaata atttggcaaa ctcttaatgc tcggtgcaaa
      361 agcgcacatt gtcaatgcta cagaccgcat gcaattcggg attaattcgg gattgggatc
      421 gactgttttt aaattttgat ggtcctcagc cattggttgt tctctcttga gggtttttgt
      481 tgttgcttta tatacttttg tttccttttt ttctggcttt tggtctcaaa ggcaatgagt
      541 tgagacctgt acaatgaatg tgatagtgat tgacgagacc gtaaagaatg gaggagattt
      601 gtgacacaga gaaactctac ggattttgga gatgaaagaa gtgatgatga cagttttgta
      661 ttaatacgaa gtgcaatata tgctttttga aatccaaact tgacgagcta cttcgaaact
      721 tttca
//