LOCUS       JO289322                 882 bp    mRNA    linear   TSA 23-FEB-2012
DEFINITION  TSA: Nitella hyalina strain KGK0190 nhya_c11669_c mRNA sequence.
ACCESSION   JO289322
VERSION     JO289322.1
DBLINK      BioProject: PRJNA51163
KEYWORDS    TSA; Transcriptome Shotgun Assembly.
SOURCE      Nitella hyalina
  ORGANISM  Nitella hyalina
            Eukaryota; Viridiplantae; Streptophyta; Charophyceae; Charales;
            Characeae; Nitella.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Broad phylogenomic sampling and the sister lineage of land plants
  JOURNAL   PLoS ONE 7 (1), E29696 (2012)
   PUBMED   22253761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2011) Cell Biology and Molecular Genetics,
            University of Maryland, Bioscience Research Building, College Park,
            MD 20947, USA
COMMENT     Two-step clustering process: First, trimmed 454 reads were
            clustered with MIRA v.2.9.43 using 454 EST assembly specific
            parameters. Second, the raw Sanger reads were combined with the 454
            contigs + singleons (with quality scores) and were cleaned then
            clustered with CAP3 (100 bp plus 95 percent identity overlap).
            
            ##Assembly-Data-START##
            Assembly Method       :: MIRA v. 2.9.43; CAP3
            Sequencing Technology :: 454 GS FLX Titanium; Sanger
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Nitella hyalina"
                     /mol_type="mRNA"
                     /strain="KGK0190"
                     /db_xref="taxon:181804"
BASE COUNT          195 a          220 c          183 g          283 t
ORIGIN      
        1 tccccgatcc actcccccgt gagctcagaa tcttgtagaa gctgtcaccc cagcactgta
       61 tctgccccct ctagctcggg ttaggtgttt tcatcctcca cgtttgttct gtcttgtact
      121 ctcttcctat tgcgttgaaa ttgcaattgt ataatgaagg aatgcatgcg agcagcgatg
      181 cagcaatccc tttttttcaa ttcttcacgt gtggattggt ttttgtagca gttacttcga
      241 tactgaagtg taaacgcttc aagattaact gcgtagtagt ctagtagaag catacaatta
      301 ctttctctga tttgccctcc gtctcctgcc ccaagggtct aatatgccgc cttaagcaat
      361 ttcctgttca cgagttgaag atgctgccga attgcagcca actgtcgccc ttcttgactc
      421 gccctcccta tcgccattgt ctctttcgat ctctttccgt atccgtctgc tatgtttgta
      481 gcagaggttg tatatgtcca cctctctccc tctctttcct cagtgtattt tctaatggct
      541 cgaccgtggc ccctatcgtg ttgtgacttc tggaagcgaa atagaattag agcaggagtg
      601 ttttctgttc atacctgtcc attgtaatcg tccgatttca aatttcttta cttttaaagt
      661 tcattcacaa aaggatggac cttcccattt gtggacaaag gctgggatct atgagcaacc
      721 ccaagtgaag tgggggtcga agaccataca gtgactggag tgtgtcggag atttttgaaa
      781 cctgcattct tatcacgttg tcgaagatta aagcgtgcat cggtatcatg ttgttgcacc
      841 tctaagacca agaaaggaca accccattgc cagrctttac ag
//